Changeset 10279 for NEMO/trunk/doc/rst/source/assimilation.rst

Timestamp:

2018-11-07T12:04:15+01:00 (6 years ago)

Author:

nicolasmartin

Message:

Various improvments for quick start guide

• implementation of Rtd theme (Read the Docs) with custom layout and style file
• add reviewed BibTeX entries for NEMO references with DOI (manuals, guide, development strategy)
• enhancement of bibliography management and configuration file for guide building
• standardisation of headings markup
• numerous edits

File:

• NEMO/trunk/doc/rst/source/assimilation.rst (moved) (moved from NEMO/trunk/doc/rst/source/data_assimilation.rst) (5 diffs)

NEMO/trunk/doc/rst/source/assimilation.rst

@@ -1 @@
-Data assimilation
-=================
-
-.. include:: .global.rst
+**************************************
+Data assimilation (OBS/SAO, ASM & TAM)
+**************************************
 
 .. contents::
@@ -12 +11 @@
 - TAM the tangent linear and adjoint model.
 
-Please see the `NEMO reference manual`_ for more details including information about the input file formats and
+Please see the `NEMO manual`_ for more details including information about the input file formats and
 the namelist settings.
 
---------------------------------------
 Observation and model comparison (OBS)
---------------------------------------
+======================================
 
 The observation and model comparison code (OBS) reads in observation files (profile temperature and salinity,
@@ -28 +26 @@
 To build with the OBS code active ``key_diaobs`` must be set. 
 
-More details in the `NEMO reference manual`_ chapter 12.
+More details in the `NEMO manual`_ chapter 12.
 
 Standalone observation operator (SAO)
@@ -43 +41 @@
 This is a special version of ``nemogcm.F90`` (which doesn't run the model, but reads in the model fields, and
 observations and runs the OBS code.
-See section 12.4 of the `NEMO reference manual`_.
+See section 12.4 of the `NEMO manual`_.
 
------------------------------------
 Apply assimilation increments (ASM)
------------------------------------
+===================================
 
 The ASM code adds the functionality to apply increments to the model variables:
@@ -56 +53 @@
 To build the ASM code ``key asminc`` must be set.
 
-More details in the `NEMO reference manual`_ chapter 13.
+More details in the `NEMO manual`_ chapter 13.
 
---------------------------------
 Tangent linear and adjoint (TAM)
---------------------------------
+================================
 
 This is the tangent linear and adjoint code of NEMO which is useful to 4D VAR assimilation.
-
-.. _NEMO reference manual: http://doi.org/10.5281/zenodo.