source: trunk/ORCHIDEE/src_stomate

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Diff Rev Age Author Log Message
(edit) @7269   3 years sebastiaan.luyssaert No longer using the N-bypass through the fungivores. Returned to a fixed …
(edit) @7250   3 years sebastiaan.luyssaert set veget for bare soil to zero. Following r6994
(edit) @7247   3 years matthew.mcgrath A couple small technical bug fixes
(edit) @7246   3 years sebastiaan.luyssaert Making KF a function of tree height. Changing Ra parameters, re-activating …
(edit) @7244   3 years matthew.mcgrath Making explicit the values of Pgap in different arrays
(edit) @7243   3 years sebastiaan.luyssaert Correction of previous commit: making KF a function of height
(edit) @7242   3 years sebastiaan.luyssaert Making KF a function of tree height/ Mainly cleaning the code surrounding …
(edit) @7241   3 years sebastiaan.luyssaert Contribute to ticket #663. Refining the bark beetle dynamics and damage
(edit) @7219   3 years sebastiaan.luyssaert Changes to insect outbreaks proposed by Guillaume. Changes to vcmax …
(edit) @7208   3 years sebastiaan.luyssaert Enhancing the soil carbon pools by applying the same parameter changes as …
(edit) @7202   3 years sebastiaan.luyssaert introducing different driver for the endimic and pandemic phases of insect …
(edit) @7197   3 years sebastiaan.luyssaert Revisions of the windthrow code. Changes proposed by Jina Jeong.
(edit) @7194   3 years sebastiaan.luyssaert Fixes ticket 777
(edit) @7187   3 years sebastiaan.luyssaert Fixes ticket 776
(edit) @7180   3 years sebastiaan.luyssaert Fixes ticket #768
(edit) @7179   3 years matthew.mcgrath Small write statement related to bug #776
(edit) @7168   3 years sebastiaan.luyssaert fixes ticket #775
(edit) @7167   3 years sebastiaan.luyssaert Fixes the mass balance problem reported in ticket #773
(edit) @7161   3 years sebastiaan.luyssaert Contributes to ticket #759. Fixes a crash that occurred in debug mode on …
(edit) @7149   3 years sebastiaan.luyssaert Consistent root profiles throughout the code. Contributes to ticket #715
(edit) @7147   3 years sebastiaan.luyssaert Changes contribute to ticket 633. Changes proposed by Jina Jeong.
(edit) @7143   3 years sebastiaan.luyssaert Added clearcutting during spinup to break synchronicity. Contributes to …
(edit) @7142   3 years sebastiaan.luyssaert Contributes to #651. Change proposed by Jina Jeong.
(edit) @7141   3 years sebastiaan.luyssaert Contributes to #651 and fixes some issues with delta13C. Changes proposed …
(edit) @7133   3 years bertrand.guenet A new output variables added
(edit) @7130   3 years sebastiaan.luyssaert Added a variable to better evaluate the effects of recruitment
(edit) @7124   3 years sebastiaan.luyssaert Bug corrcetion for the calculation of labile_target. Contributes to #698
(edit) @7120   3 years sebastiaan.luyssaert Contrinutes to ticket #765
(edit) @7113   3 years sebastiaan.luyssaert Fixes ticket #763
(edit) @7106   3 years sebastiaan.luyssaert Unit corrections for NBP and its cross checks and refinements for …
(edit) @7103   3 years sebastiaan.luyssaert Changes contributing to ticket #759
(edit) @7088   3 years sebastiaan.luyssaert Changes contributing gto ticket #728 proposed by Chao Yue
(edit) @7083   3 years matthew.mcgrath Adding an option to use dominant vegetation height in calculating …
(edit) @7058   3 years sebastiaan.luyssaert fixes consistency cross-check for nbp for vertical soil discretization. …
(edit) @7057   3 years sebastiaan.luyssaert fixes ticket #756 and contributes to ticket #759
(edit) @7055   3 years matthew.mcgrath Fixing the soil carbon output variable, and changing the default output …
(edit) @7033   3 years sebastiaan.luyssaert Externalized the ratio of Rm/GP and added bm_alloc for labile and reserves …
(edit) @7015   3 years sebastiaan.luyssaert revert some changes that should not have been committed
(edit) @7012   3 years sebastiaan.luyssaert Use ratio between Rm/GPP to trigger senescence for grasslands
(edit) @7011   3 years sebastiaan.luyssaert Final changes for #744 (stomate.f90 and stomate_io.f90) and some …
(edit) @7010   3 years sebastiaan.luyssaert contributes to #744
(edit) @7009   3 years sebastiaan.luyssaert Contributes to #744. Restores the capability to run the nbp cross-checking …
(edit) @7006   3 years sebastiaan.luyssaert contributes to ticket #744
(edit) @7004   3 years sebastiaan.luyssaert Fixes ticket #739 and contributes to #749
(edit) @6999   3 years sebastiaan.luyssaert Contributing to #744. Made the two consistency checks for nbp more …
(edit) @6998   3 years sebastiaan.luyssaert Contributes to ticket #744
(edit) @6995   3 years matthew.mcgrath A couple small uninitialized variable bugfixes
(edit) @6988   4 years sebastiaan.luyssaert Contributes to ticket #744 but does not finalizes it yet. Also fixes two …
(edit) @6985   4 years matthew.mcgrath Bug fix: unitialized variables in stomate, ticket 752
(edit) @6984   4 years sebastiaan.luyssaert Restores restartability of the model. Fixes ticket #750
(edit) @6982   4 years sebastiaan.luyssaert Contributes to ticket #744. Consistency cross-checking for analytical …
(edit) @6981   4 years sebastiaan.luyssaert Integrated ipresenescence in plant_status. Changes proposed by Guillaume …
(edit) @6977   4 years sebastiaan.luyssaert Added consistency cross checking for NBP. Added dimensions to prod, flux …
(edit) @6963   4 years sebastiaan.luyssaert Making maintanance respiration a function of labile rather than the …
(edit) @6961   4 years sebastiaan.luyssaert Small fixes of the calculation of maintanance respiration
(edit) @6947   4 years sebastiaan.luyssaert Introduced a pre-senescence phase and made senescene dependent on the …
(edit) @6945   4 years sebastiaan.luyssaert Bug fix for the phenology of PFT3 contributes to ticket #714
(edit) @6942   4 years sebastiaan.luyssaert Correctly initialize xios for variables that are written within an ok-flag
(edit) @6931   4 years sebastiaan.luyssaert Fixes ticket #727. Tested for all four combinations of impose_cn and …
(edit) @6925   4 years sebastiaan.luyssaert Fixes ticket #732
(edit) @6921   4 years sebastiaan.luyssaert Bug fix in the calculation of nep and nbp
(edit) @6918   4 years sebastiaan.luyssaert Added fail safe option for phenology (ok_force_pheno) required a partial …
(edit) @6913   4 years sebastiaan.luyssaert Maintenance respiration can now be calculated as a function of nitrogen or …
(edit) @6910   4 years sebastiaan.luyssaert Added history variables to better monitor phenology and set Larch …
(edit) @6908   4 years sebastiaan.luyssaert Bug fix. Added fruit turnover for grasses. Contributes to ticket #725
(edit) @6904   4 years sebastiaan.luyssaert LAI_MEAN is now annual mean LAI and is the same as LAI in Tag2.1
(edit) @6901   4 years sebastiaan.luyssaert Harmonized the variable names used to describe the relative soil moisture. …
(edit) @6900   4 years sebastiaan.luyssaert Enhanced consistency of the calculation of the target nitrogen and carbon …
(edit) @6898   4 years sebastiaan.luyssaert Fixes ticket #726 - double use of a single variable name
(edit) @6893   4 years sebastiaan.luyssaert Bug fix in stomate_growth_fun_all.f90 and added variables mainly for …
(edit) @6886   4 years sebastiaan.luyssaert Resolved inconsistencies and duplications between longevity_leaf and …
(edit) @6883   4 years sebastiaan.luyssaert Added diagnostic output variables to xios to evaluate recruitment and …
(edit) @6877   4 years matthew.mcgrath Removing a confusing and redundant flag for recruitment
(edit) @6871   4 years matthew.mcgrath Bug fix for ticket #722
(edit) @6870   4 years matthew.mcgrath It seems changeset 6868 was overwritten by 6869. Redoing.
(edit) @6869   4 years sebastiaan.luyssaert DEV: tested on a 3x3 region. The N content of the reserve pool now …
(edit) @6868   4 years matthew.mcgrath Bug fix for ticket #719 on mass balance closure in FG1trans
(edit) @6829   4 years sebastiaan.luyssaert Fixes the mass balance check in dim_product_use. Contributes to ticket …
(edit) @6825   4 years sebastiaan.luyssaert DEV: added N-mobility between the reserve and the labile pool. This …
(edit) @6822   4 years sebastiaan.luyssaert Code changes fix problems with the fluxes from the product pools. …
(edit) @6821   4 years sebastiaan.luyssaert Development: sapwood mortality from hydraulic failure. Removed output …
(edit) @6819   4 years sebastiaan.luyssaert Development: sapwood mortality from hydraulic failure. The code can be …
(edit) @6810   4 years sebastiaan.luyssaert Additional output variables to evaluate stand dynamics
(edit) @6801   4 years sebastiaan.luyssaert Added two fail safe option in stomate_turnover to ensure that deciduous …
(edit) @6799   4 years sebastiaan.luyssaert Code changes in line with the issues described in ticket #666. The …
(edit) @6798   4 years sebastiaan.luyssaert Bug fix contributing to ticket #709
(edit) @6794   4 years sebastiaan.luyssaert Implemented changeset 6782: plant N uptake is now a function of longterm …
(edit) @6787   4 years sebastiaan.luyssaert Implemented changeset 6781: externalizing parameter defining the …
(edit) @6762   4 years matthew.mcgrath Printing out more information in a crash on heterotrophic respiration
(edit) @6757   4 years sebastiaan.luyssaert Simplified parameterization: for grasses and cropland height_init_min and …
(edit) @6742   4 years sebastiaan.luyssaert Renamed tau_leaf, tau_sap and tau_root as longevity_leaf, longevity_sap …
(edit) @6741   4 years sebastiaan.luyssaert removed the parameter leaflife_tab. Leaflife_tab (for the dgvm) and …
(edit) @6740   4 years sebastiaan.luyssaert Split LAI into LAI_MEAN and LAI_MAX in the stomate history files. No …
(edit) @6739   4 years sebastiaan.luyssaert Accounting for the absence of leaves when writing LEAF_AGE, VCMAX and …
(edit) @6732   4 years bertrand.guenet bug correction related to the writing of stomate_Cforcing
(edit) @6730   4 years sebastiaan.luyssaert Fixes a problem with grassland and cropland senescence. See ticket #704
(edit) @6720   4 years sebastiaan.luyssaert Added two diagnostic output variables to better track the calculation of …
(edit) @6718   4 years sebastiaan.luyssaert Changes close the mass balance for CO2 in …
(edit) @6699   4 years sebastiaan.luyssaert Changes to read the new global forest management as well as the previous …
(edit) @6697   4 years josefine.ghattas Use a intermediate variable to avoid problem in debug mode at Jean-Zay, …
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