Changes between Version 357 and Version 358 of user/flavoni/libIGCM

Timestamp:

2009-04-03T11:43:56+02:00 (15 years ago)

Author:

flavoni

Comment:

--

user/flavoni/libIGCM

@@ -107 +107 @@
  [Restarts]
 
+ '''How to have mail of end of Job, on ccrt's machines'''
+
+ on mercure: in Job_Name: #PBS -M name@mail [[BR]]
+ on platine: In Job_Name: #BSUB -u name@mail 
+
  '''How to manage write output frequency'''
 
@@ -165 +170 @@
  {OUTPUT_DIR}/IGCM_OUT/ORCA2_LIM/N360d_5d/OCE/Debug/!JobName_date_date_ocean.output
 
- '''How to activate Monitoring'''
+== Post Processing : ==
+
+[[BR]]
+   
+     * '''How to activate Monitoring'''
 
  in config.card file 
@@ -177 +186 @@
  TimeSeriesFrequency=10Y
  
- '''How to activate dynamic Monitoring'''  (25/02/2009)
+    * '''How to activate dynamic Monitoring'''  (25/02/2009)
  
  * Copy original monitoring files in SUBMIT_DIR : [[BR]]
@@ -202 +211 @@
 
 
- '''How to activate Atlas'''
+    * '''How to activate Atlas'''
 
  in config.card file 
@@ -215 +224 @@
 
   
- '''How to manage frequency of post processing''' 
-
- ( Note: in this moment is not possible to have atlas and monitoring of frequency different from '''1M''', if we want this we've to see it with Patrick Brockman!! )
+    * '''How to manage frequency of post processing''' 
+
+ ( Note: in this moment is not possible to have atlas and monitoring of frequency different from '''1M''' )
 
  in COMP/nemo.card you have to change in [OutputFiles] chapter:
@@ -231 +240 @@
  and you have to change [Post_'''1M'''_icemod] chapter.
 
+[[BR]]
+[[BR]]
+
+== Re-Run only post processing, for an already run job : ==
+
+[[BR]]
+   
+    * '''Run post processing'''
+
+ see: http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ
+
+ in particular: http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ#Commentrelancerlespost-traitements%C3%A0partirdelafrontale
+
+ and  http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ#Commentrelancerlespost-traitements%C3%A0partirdelamachinedecalcul
+
+[[BR]]
+
+== Example of post processing. a Job already run for 10 years form 2001 to 2010 : ==
+ 
+=== in '''run.card''' ===
+
+ * modify '''!OldPrefix'''
+{{{
+ OldPrefix=''Job_!Name''_(aa-1)mmdd
+}}}
+ where (aa-1)mmdd is last day of last month of one year before you simulation's start
+
+  * modify '''!CumulPeriod'''
+{{{
+!CumulPeriod=10
+ }}}
+ is 10 years that you've already run
+
+ * modify '''!PeriodState'''
+{{{
+ !PeriodState=!OnQueue
+ }}}
+
+ * modify '''!TimeSeriesRunnging'''
+{{{
+ !TimeSeriesRunnging=n
+ }}}
+ no because Time series are depending for each other, so if you want to start a time series it starts ONLY when a previous one is finished, so if you put !TimeSeriesRunnging=y (i.e. yes) it can't never start
+
+ * modify '''!TimeSeriesCompleted'''
+{{{
+ !TimeSeriesCompleted=
+ }}}
+ nothing because we want to do time series for all 10 years
+ ( If not you have to put last time series already realised )
+
+=== in '''Job_Name''': ===
+ 
+ * modify '''cputim_job'''
+{{{
+#PBS -l cputim_job=4:00:00  # Limite temps 
+}}}
+
+ * modify '''DRYRUN'''
+{{{
+ DRYRUN=3
+}}}
+
+ * modify '''RUN_DIR_PATH'''
+{{{
+ Create, if necessary, a test directory (for example in you workdir)
+ Decomment RUN_DIR_PATH=/$workdir/TESTPOST         
+}}}
+
+ * modify '''SUBMIT_DIR'''
+{{{
+ Decomment and put right submit directory (the one in which you are changed you run.card and you Job) 
+ SUBMIT_DIR=/$workdir/modipsl/config/$CONFIG_NAME/EXP00 
+}}}
+
+[[BR]]
+[[BR]]
 
 == How to make a parallel run: ==
@@ -259 +345 @@
  }}}
  
-
  * Do an ins_make : [[BR]]
  {{{
@@ -281 +366 @@
  }}}
 
- * Able run multi processors option in modipsl/config/ORCA2_LIM/IGCM00/config.card: : [[BR]]
+ * Enable run multi processors option in modipsl/config/ORCA2_LIM/IGCM00/config.card: : [[BR]]
  {{{
  #-- Run Options :
  JobRunOptions='"-np "${BATCH_NUM_PROC_TOT}"'
  }}}
-
- * '''How to have mail of end of Job, on ccrt's machines'''
-
- on mercure: in Job_Name: #PBS -M name@mail
- 
- on platine: In Job_Name: #BSUB -u name@mail
-
-[[BR]]
-[[BR]]
-
-== Run only post processing: ==
-
-[[BR]]
-   
-    * '''If you have already run a job and you need only to run post processing'''
-
- you can do it in 3 ways:
-
- see: http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ
-
- in particular: http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ#Commentrelancerlespost-traitements%C3%A0partirdelafrontale
-
- and  http://forge.ipsl.jussieu.fr/libigcm/wiki/libIGCM/DocUtilisateur/FAQ#Commentrelancerlespost-traitements%C3%A0partirdelamachinedecalcul
-
-[[BR]]
-
-== Example of post processing. a Job already run for 10 years form 2001 to 2010 : ==
- 
-=== in '''run.card''' ===
-
- * modify '''!OldPrefix'''
-{{{
- OldPrefix=''Job_!Name''_(aa-1)mmdd
-}}}
- where (aa-1)mmdd is last day of last month of one year before you simulation's start
-
-  * modify '''!CumulPeriod'''
-{{{
-!CumulPeriod=10
- }}}
- is 10 years that you've already run
-
- * modify '''!PeriodState'''
-{{{
- !PeriodState=!OnQueue
- }}}
-
- * modify '''!TimeSeriesRunnging'''
-{{{
- !TimeSeriesRunnging=n
- }}}
- no because Time series are depending for each other, so if you want to start a time series it starts ONLY when a previous one is finished, so if you put !TimeSeriesRunnging=y (i.e. yes) it can't never start
-
- * modify '''!TimeSeriesCompleted'''
-{{{
- !TimeSeriesCompleted=
- }}}
- nothing because we want to do time series for all 10 years
- ( If not you have to put last time series already realised )
-
-=== in '''Job_Name''': ===
- 
- * modify '''cputim_job'''
-{{{
-#PBS -l cputim_job=4:00:00  # Limite temps 
-}}}
-
- * modify '''DRYRUN'''
-{{{
- DRYRUN=3
-}}}
-
- * modify '''RUN_DIR_PATH'''
-{{{
- Create, if necessary, a test directory (for example in you workdir)
- Decomment RUN_DIR_PATH=/$workdir/TESTPOST         
-}}}
-
- * modify '''SUBMIT_DIR'''
-{{{
- Decomment and put right submit directory (the one in which you are changed you run.card and you Job) 
- SUBMIT_DIR=/$workdir/modipsl/config/$CONFIG_NAME/EXP00 
-}}}
-
+ 
 [[BR]]
 [[BR]]