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WorkingGroups/HPC/Mins_2016_02_10 (diff) – NEMO

Changes between Version 1 and Version 2 of WorkingGroups/HPC/Mins_2016_02_10


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Timestamp:
2016-03-08T18:41:40+01:00 (8 years ago)
Author:
mikebell
Comment:

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  • WorkingGroups/HPC/Mins_2016_02_10

    v1 v2  
    1 = Minutes = 
     1= Minutes NEMO HPC Working Group - 10 Feb 2016 meeting == 
     2 
     31.       Check attendance (5 minutes) 
     4Present: A. Porter, Matthew Glover, Tim Grahm, Jason Holt, Martin Schreiber, A. Coward, Dmitry Kuts, J. Appleyard, Kim Serradel, Lanton, M. Castrillo, Oril Tinto, Silvia Mocavero, Stan Posey, T. Bradley F. Krueger, C. Lévy 
     5 
     62.       Actions from previous meetings(20 mins) 
     7 
     8- Action 1:  Miguel, Silvia, Tim and Claire to coordinate the set up and review of these two configurations  
     9Tim has created a branch in NEMO repository in branches/2016/dev_HPC_Gyre_benchmark_test/NEMOGCM/BENCHMARK to set up the benchmark for GYRE (first configuration chosen). He has started to add counters (more work to be done). 
     10Miguel has worked on the ORCA025_LIM3 configuration to be added in this benchmark branch 
     11 
     12- Action 2: Mike to put information from group meeting on the NEMO HPC WG wiki page. Not done yet. 
     13 
     14- Action 3: Mondher will email Silvia, Miguel, Tim and Mike information on computers accessible to Mercator. 
     15No answer yet from Mondher. 
     16 
     17- Action 4: Claire, Tim, Silvia, Miguel to agree what version of NEMO to use for these benchmarks  
     18Decided to set up the benchmark in head of the trunk (future 4.0 release) 
     19 
     20- Action 5:Mike to circulate the present draft of the HPC task description and the WP structure. Members to respect the confidentiality of this information. 
     21 
     223.       H2020 Copernicus call:  (Silvia) (10 mins) 
     23Silvia has shared the HPC workpackage with the working group. The workpackage mainly includes: 
     24- improving // efficiency 
     25- improving single node performances 
     26- real test cases 
     27 
     284.         Presentation: NEMO hybridization project at Intel, OpenMP parallelization (D. Kuts, title to be confirmed) 
     29See slides attached. 
     30Development work started from nemo v3_4_STABLE and the hybrid branch (MPI+OMP) developped by Silvia Mocavero 
     31For future: needs longer inegration (more time steps) and a few different platforms, probably. 
     32Discussion on wether it is useful to update from 3_4_STABLE to 3_6_STABLE or even to trunk? 
     33Dmitri is willing to share his developments and results 
     34 
     355.       Discussion on single-core performance measurements and optimisation (M. Schreiber) 
     36- Need to agree on how to measure performances 
     37- how to cover all architectures? 
     38- measure computation phase only, or include start up phase 
     39- instumentationthrough timing 
     40- single core performance 
     41- cache 
     42- portability 
     43- possible performance tools: papi into timing function  
     44- detect bottlenecks 
     45Document sent to the whole group for approval 
     46 
     476.       AoB (10 mins) 
     48- Possible topics for next meetings?