Changeset 6467 for branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS
- Timestamp:
- 2016-04-12T10:47:46+02:00 (8 years ago)
- Location:
- branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN
- Files:
-
- 1 added
- 1 deleted
- 8 edited
Legend:
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- Added
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branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/README
r5037 r6467 1 This is a first release of SIREN.2 1 3 To create SIREN documentation, go to ./src and run doxygen2 To create SIREN documentation, run doxygen in TOOLS/SIREN directory 4 3 (http://www.stack.nl/~dimitri/doxygen/index.html version 1.8.3.1 or upper) 5 4 then 6 open . ./doc/index.html5 open ./TOOLS/SIREN/doc/html/index.html in your web browser 7 6 or 8 run ../doc/latex/gmake and open refman.pdf 9 10 11 templates of namelists could be find in templates directory. 12 read documentation for more information. 13 14 1- program to create coordinate file : 15 16 ./create_coord create_coord.nam 17 18 19 Variables are extracted from the input coordinates coarse grid and 20 interpolated to create fine coordinates files. 21 22 2- program to create bathymetry file: 23 24 ./create_bathy create_bathy.nam 25 26 Bathymetry could be extracted from fine grid Bathymetry file, or 27 interpolated from coarse grid Bathymetry file. 28 29 3- program to merge bathymetry file at boundaries : 30 31 ./merge_bathy merge_bathy.nam 32 33 Coarse grid Bathymetry is interpolated on fine grid. 34 Then fine Bathymetry and refined coarse bathymetry are merged at 35 boundaries. 36 37 4- program to create restart file : 38 39 ./create_restart create_restart.nam 40 41 Variables are read from restart file, or standard output. 42 Then theses variables are interpolated on fine grid. 43 Finally table are split over new decomposition. 44 45 5- program to create boundary files (OBC) : 46 47 ./create_boundary create_boundary.nam 48 49 Variables are read from standard output. 50 Then theses variables are interpolated on fine grid boundaries. 7 run ./TOOLS/SIREN/doc/latex/gmake and open ./TOOLS/SIREN/doc/latex/refman.pdf -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/1_install.md
r6392 r6467 20 20 <b> 21 21 - @ref index 22 - @ref md_ docsrc_2_quickstart23 - @ref md_ docsrc_3_support_bug24 - @ref md_ docsrc_4_codingRules25 - @ref md_ docsrc_5_changeLog22 - @ref md_src_docsrc_2_quickstart 23 - @ref md_src_docsrc_3_support_bug 24 - @ref md_src_docsrc_4_codingRules 25 - @ref md_src_docsrc_5_changeLog 26 26 - @ref todo 27 27 </b> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/2_quickstart.md
r6392 r6467 35 35 Here after we briefly describe how to use each programs, 36 36 and so how to create your own regional configuration. 37 @note A set of GLORYS files (global reanalysis on *ORCA025* 38 grid), as well as examples of namelists are available in dods repository.<br/> 39 You could create and forced a first release of your own regional configuration, 40 with those files. 37 @note As demonstrator for a first start a set of GLORYS files (global reanalysis on *ORCA025* grid), as well as examples of namelists are available [here](https://cloud.mercator-ocean.fr/public.php?service=files&t=877fb1b6e4f589340fc0df1ea6a53228). 38 41 39 <!-- ###################################################################### --> 42 40 # Create coordinates file # {#coord} … … 121 119 example: ORCA05</dd> 122 120 </dl> 123 @sa For more information see @ref md_ docsrc_6_perio121 @sa For more information see @ref md_src_docsrc_6_perio 124 122 </dd> 125 123 </dl> … … 592 590 <b> 593 591 - @ref index 594 - @ref md_ docsrc_1_install595 - @ref md_ docsrc_2_quickstart596 - @ref md_ docsrc_3_support_bug597 - @ref md_ docsrc_4_codingRules598 - @ref md_ docsrc_5_changeLog592 - @ref md_src_docsrc_1_install 593 - @ref md_src_docsrc_2_quickstart 594 - @ref md_src_docsrc_3_support_bug 595 - @ref md_src_docsrc_4_codingRules 596 - @ref md_src_docsrc_5_changeLog 599 597 - @ref todo 600 598 </b> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/3_support_bug.md
r6392 r6467 20 20 <b> 21 21 - @ref index 22 - @ref md_ docsrc_1_install23 - @ref md_ docsrc_2_quickstart24 - @ref md_ docsrc_3_support_bug25 - @ref md_ docsrc_4_codingRules26 - @ref md_ docsrc_5_changeLog22 - @ref md_src_docsrc_1_install 23 - @ref md_src_docsrc_2_quickstart 24 - @ref md_src_docsrc_3_support_bug 25 - @ref md_src_docsrc_4_codingRules 26 - @ref md_src_docsrc_5_changeLog 27 27 - @ref todo 28 28 </b> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/4_codingRules.md
r6392 r6467 15 15 _GET_COMMAND_ARGUMENT_.<br/> 16 16 There exist no equivalent for those Fortran 03 intrinsec functions in Fortran 17 95.<br/> At least none convenient for compilers tested (see @ref md_ docsrc_1_install).17 95.<br/> At least none convenient for compilers tested (see @ref md_src_docsrc_1_install). 18 18 19 19 # Free Form Source {#free} … … 93 93 <b> 94 94 - @ref index 95 - @ref md_ docsrc_1_install96 - @ref md_ docsrc_2_quickstart97 - @ref md_ docsrc_3_support_bug98 - @ref md_ docsrc_5_changeLog95 - @ref md_src_docsrc_1_install 96 - @ref md_src_docsrc_2_quickstart 97 - @ref md_src_docsrc_3_support_bug 98 - @ref md_src_docsrc_5_changeLog 99 99 - @ref todo 100 100 </b> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/5_changeLog.md
r6392 r6467 3 3 @tableofcontents 4 4 5 # Release $Revision$6 Initial release (2016-0 3-17)5 # Release 6 Initial release (2016-04-11) 7 7 8 8 ## Changes … … 13 13 <b> 14 14 - @ref index 15 - @ref md_ docsrc_1_install16 - @ref md_ docsrc_2_quickstart17 - @ref md_ docsrc_3_support_bug18 - @ref md_ docsrc_4_codingRules15 - @ref md_src_docsrc_1_install 16 - @ref md_src_docsrc_2_quickstart 17 - @ref md_src_docsrc_3_support_bug 18 - @ref md_src_docsrc_4_codingRules 19 19 - @ref todo 20 20 </b> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/6_perio.md
r6392 r6467 10 10 <dd>first and last rows are closed, whilst the first column is set to the value of the last-but-one column and the last column to the value of the second one.</dd> 11 11 @image html perio1_20.png 12 @ image latex perio1_20.png12 @centered @image latex perio1_20.png 13 13 <dt>symmetric boundary condition across the equator. (in_perio=2)</dt> 14 14 <dd>last row, and first and last columns are closed. </dd> 15 15 @image html perio2_20.png 16 @image latex perio2_20.png 16 @image latex perio2_20.png 17 17 <dt>North fold boundary with a T -point pivot (in_perio=3)</dt> 18 18 <dd>first row, and first and last columns are closed. </dd> -
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/main.dox
r6392 r6467 2 2 @mainpage About 3 3 4 SIREN is a software to create regional configuration with [NEMO](http://www.nemo-ocean.eu).<br/> 5 Actually SIREN create input files needed for a basic NEMO configuration.<br/> 4 SIREN is a software to set up regional configuration with [NEMO](http://www.nemo-ocean.eu).<br/> 5 Actually SIREN creates the input files you need to run a NEMO regional configuration.<br/> 6 7 SIREN allows you to create your own regional configuration embedded in a wider one.<br/> 6 8 7 SIREN allows you to create your own regional configuration embedded in a wider one.<br/> 8 In order to help you, a set of GLORYS files (global reanalysis on ORCA025 grid), as well as examples 9 of namelists are available in dods repository. 9 To know how to install SIREN see @ref md_src_docsrc_1_install. 10 10 11 @note This software was created, and is maintain by the Configuration Manager Working Group, composed 12 of NEMO system team members. 13 14 To know how to install SIREN see @ref md_docsrc_1_install. 15 16 You could find a tutorial for a quick start with SIREN in @ref md_docsrc_2_quickstart.<br/> 11 You could find a tutorial for a quick start with SIREN in @ref md_src_docsrc_2_quickstart.<br/> 17 12 For more information about how to use each component of SIREN 18 13 - see create_coord.f90 to create fine grid coordinate file … … 24 19 <HR> 25 20 <b> 26 - @ref md_ docsrc_1_install27 - @ref md_ docsrc_2_quickstart28 - @ref md_ docsrc_3_support_bug29 - @ref md_ docsrc_4_codingRules30 - @ref md_ docsrc_5_changeLog21 - @ref md_src_docsrc_1_install 22 - @ref md_src_docsrc_2_quickstart 23 - @ref md_src_docsrc_3_support_bug 24 - @ref md_src_docsrc_4_codingRules 25 - @ref md_src_docsrc_5_changeLog 31 26 - @ref todo 32 27 </b>
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