Changeset 4687 for trunk/NEMOGCM/SETTE
- Timestamp:
- 2014-06-24T17:22:03+02:00 (10 years ago)
- Location:
- trunk/NEMOGCM/SETTE
- Files:
-
- 2 added
- 3 edited
Legend:
- Unmodified
- Added
- Removed
-
trunk/NEMOGCM/SETTE/prepare_job.sh
r4373 r4687 182 182 fi 183 183 184 # example for NOCS Altix system using PBSbatch submission (requires ${SETTE_DIR}/sette_batch_template file)184 # example for NOCS ClusterVision system using SLURM batch submission (requires ${SETTE_DIR}/sette_batch_template file) 185 185 # 186 186 # if [ ${MPI_FLAG} == "no" ] ; then 187 187 case ${COMPILER} in 188 ALTIX_NAUTILUS_MPT)189 NB_REM=$( echo $NB_PROC $NXIO_PROC | awk '{print ( $1 + $2 ) % 4}')188 X64_MOBILIS) 189 NB_REM=$( echo $NB_PROC $NXIO_PROC | awk '{print ( $1 + $2 ) % 16}') 190 190 if [ ${NB_REM} == 0 ] ; then 191 # number of processes required is an integer multiple of 4191 # number of processes required is an integer multiple of 16 192 192 # 193 NB_NODES=$( echo $NB_PROC $NXIO_PROC | awk '{print ($1 + $2 ) / 4}')193 NB_NODES=$( echo $NB_PROC $NXIO_PROC | awk '{print ($1 + $2 ) / 16}') 194 194 else 195 195 # 196 # number of processes required is not an integer multiple of 4196 # number of processes required is not an integer multiple of 16 197 197 # round up the number of nodes required. 198 198 # 199 NB_NODES=$( echo $NB_PROC $NXIO_PROC | awk '{printf("%d",($1 + $2 ) / 4+ 1 )}')199 NB_NODES=$( echo $NB_PROC $NXIO_PROC | awk '{printf("%d",($1 + $2 ) / 16 + 1 )}') 200 200 fi 201 201 ;; -
trunk/NEMOGCM/SETTE/sette_rpt
r3725 r4687 17 17 cd $NEMO_VALID 18 18 # 19 # The script also needs the date or revision tag. Currently this is taken from the latest sub-directory 20 # found in the WGYRE_LONG directory 21 # 22 set dorv = `ls -1rtd ./WGYRE_LONG/{$mach}/* | tail -1l ` 23 set dorv = $dorv:t 19 # The script also needs the date or revision tag. Currently this is taken from the latest sub-directory found in each directory 20 # 24 21 # 25 22 # Now loop through all the test directories. On the second pass the user can optionally examine any mismatched … … 30 27 foreach pass (0 1 ) 31 28 if ( -d ./WGYRE_LONG ) then 29 set dorv = `ls -1rtd ./WGYRE_LONG/{$mach}/* | tail -1l ` 30 set dorv = $dorv:t 32 31 set f1o = ./WGYRE_LONG/{$mach}/{$dorv}/LONG/ocean.output 33 32 set f1s = ./WGYRE_LONG/{$mach}/{$dorv}/LONG/solver.stat … … 39 38 cmp -s f1.tmp$$ $f2s 40 39 if ( $status == 0 ) then 41 echo "GYRE restartability passed"42 else 43 echo "GYRE restartability FAILED"40 echo "GYRE restartability passed" 41 else 42 echo "GYRE restartability FAILED" 44 43 if ( $pass == 1 ) then 45 44 echo "<return> to view solver.stat differences" … … 57 56 58 57 if ( -d ./WORCA2LIMPIS_LONG ) then 58 set dorv = `ls -1rtd ./WORCA2LIMPIS_LONG/{$mach}/* | tail -1l ` 59 set dorv = $dorv:t 59 60 set f1o = ./WORCA2LIMPIS_LONG/{$mach}/{$dorv}/LONG/ocean.output 60 61 set f1s = ./WORCA2LIMPIS_LONG/{$mach}/{$dorv}/LONG/solver.stat … … 84 85 85 86 if ( -d ./WORCA2OFFPIS_LONG ) then 87 set dorv = `ls -1rtd ./WORCA2OFFPIS_LONG/{$mach}/* | tail -1l ` 88 set dorv = $dorv:t 86 89 set f1o = ./WORCA2OFFPIS_LONG/{$mach}/{$dorv}/LONG/ocean.output 87 90 set f1s = ./WORCA2OFFPIS_LONG/{$mach}/{$dorv}/LONG/tracer.stat … … 111 114 112 115 if ( -d ./WAMM12_LONG ) then 116 set dorv = `ls -1rtd ./WAMM12_LONG/{$mach}/* | tail -1l ` 117 set dorv = $dorv:t 113 118 set f1o = ./WAMM12_LONG/{$mach}/{$dorv}/LONG/ocean.output 114 119 set f1s = ./WAMM12_LONG/{$mach}/{$dorv}/LONG/solver.stat … … 136 141 rm f1.tmp$$ 137 142 endif 138 143 NEXT0: 144 if ( -d ./WSAS_LONG ) then 145 set dorv = `ls -1rtd ./WSAS_LONG/{$mach}/* | tail -1l ` 146 set dorv = $dorv:t 147 set f1o = ./WSAS_LONG/{$mach}/{$dorv}/LONG/ocean.output 148 set f1s = ./WSAS_LONG/{$mach}/{$dorv}/LONG/solver.stat 149 set f2o = ./WSAS_LONG/{$mach}/{$dorv}/SHORT/ocean.output 150 set f2s = ./WSAS_LONG/{$mach}/{$dorv}/SHORT/solver.stat 151 152 foreach f ( $f1o $f1s $f2o $f2s ) 153 if ( ! -f $f ) then 154 echo 'SAS restartability inconclusive ( ' $f:t ' not found )' 155 goto NEXT 156 endif 157 end 158 159 set nl = `wc -l $f2s` 160 tail -$nl[1] $f1s > f1.tmp$$ 161 cmp -s f1.tmp$$ $f2s 162 if ( $status == 0 ) then 163 echo "SAS restartability passed" 164 else 165 echo "SAS restartability FAILED" 166 if ( $pass == 1 ) then 167 echo "<return> to view solver.stat differences" 168 set y = $< 169 sdiff f1.tmp$$ $f2s 170 echo "<return> to view ocean.output differences" 171 set y = $< 172 sdiff $f1o $f2o | grep "|" 173 echo "<return> to continue" 174 set y = $< 175 endif 176 endif 177 rm f1.tmp$$ 178 endif 179 180 NEXT: 139 181 echo 140 182 141 183 if ( -d ./WGYRE_4 ) then 184 set dorv = `ls -1rtd ./WGYRE_4/{$mach}/* | tail -1l ` 185 set dorv = $dorv:t 142 186 set f1o = ./WGYRE_4/{$mach}/{$dorv}/REPRO_1_4/ocean.output 143 187 set f1s = ./WGYRE_4/{$mach}/{$dorv}/REPRO_1_4/solver.stat … … 147 191 cmp -s $f1s $f2s 148 192 if ( $status == 0 ) then 149 echo "GYRE reproducibility passed"150 else 151 echo "GYRE reproducibility FAILED"193 echo "GYRE reproducibility passed" 194 else 195 echo "GYRE reproducibility FAILED" 152 196 if ( $pass == 1 ) then 153 197 echo "<return> to view solver.stat differences" … … 164 208 165 209 if ( -d ./WORCA2LIMPIS_16 ) then 210 set dorv = `ls -1rtd ./WORCA2LIMPIS_16/{$mach}/* | tail -1l ` 211 set dorv = $dorv:t 166 212 set f1o = ./WORCA2LIMPIS_16/{$mach}/{$dorv}/REPRO_2_8/ocean.output 167 213 set f1s = ./WORCA2LIMPIS_16/{$mach}/{$dorv}/REPRO_2_8/solver.stat … … 188 234 189 235 if ( -d ./WORCA2OFFPIS_16 ) then 236 set dorv = `ls -1rtd ./WORCA2OFFPIS_16/{$mach}/* | tail -1l ` 237 set dorv = $dorv:t 190 238 set f1o = ./WORCA2OFFPIS_16/{$mach}/{$dorv}/REPRO_2_8/ocean.output 191 239 set f1s = ./WORCA2OFFPIS_16/{$mach}/{$dorv}/REPRO_2_8/tracer.stat … … 212 260 213 261 if ( -d ./WAMM12_32 ) then 262 set dorv = `ls -1rtd ./WAMM12_32/{$mach}/* | tail -1l ` 263 set dorv = $dorv:t 214 264 set f1o = ./WAMM12_32/{$mach}/{$dorv}/REPRO_4_8/ocean.output 215 265 set f1s = ./WAMM12_32/{$mach}/{$dorv}/REPRO_4_8/solver.stat … … 235 285 endif 236 286 287 if ( -d ./WSAS_32 ) then 288 set dorv = `ls -1rtd ./WSAS_32/{$mach}/* | tail -1l ` 289 set dorv = $dorv:t 290 set f1o = ./WSAS_32/{$mach}/{$dorv}/REPRO_4_8/ocean.output 291 set f1s = ./WSAS_32/{$mach}/{$dorv}/REPRO_4_8/solver.stat 292 set f2o = ./WSAS_32/{$mach}/{$dorv}/REPRO_8_4/ocean.output 293 set f2s = ./WSAS_32/{$mach}/{$dorv}/REPRO_8_4/solver.stat 294 295 foreach f ( $f1o $f1s $f2o $f2s ) 296 if ( ! -f $f ) then 297 echo 'SAS reproducibility inconclusive ( ' $f:t ' not found )' 298 goto NEXT1 299 endif 300 end 301 302 cmp -s $f1s $f2s 303 if ( $status == 0 ) then 304 echo "SAS reproducibility passed" 305 else 306 echo "SAS reproducibility FAILED" 307 if ( $pass == 1 ) then 308 echo "<return> to view solver.stat differences" 309 set y = $< 310 sdiff $f1s $f2s 311 echo "<return> to view ocean.output differences" 312 set y = $< 313 sdiff $f1o $f2o | grep "|" 314 echo "<return> to continue" 315 set y = $< 316 endif 317 endif 318 endif 319 NEXT1: 320 237 321 if ( -d ./WORCA2AGUL_1_2 ) then 322 set dorv = `ls -1rtd ./WORCA2AGUL_1_2/{$mach}/* | tail -1l ` 323 set dorv = $dorv:t 238 324 set f1o = ./WORCA2AGUL_1_2/{$mach}/{$dorv}/SHORT/ocean.output 239 325 set f1s = ./WORCA2AGUL_1_2/{$mach}/{$dorv}/SHORT/solver.stat -
trunk/NEMOGCM/SETTE/sette_xios.sh
r4373 r4687 104 104 CMP_NAM=${1:-$COMPILER} 105 105 # Copy job_batch_COMPILER file for specific compiler into job_batch_template 106 #================================================================================= 107 # Note this script sets up and submits a mixture of SPMD and MPMD jobs corresponding 108 # to ATTACHED and DETACHED mode, XIOS jobs. In general, the launch command for these 109 # jobs is different and is accommodated here by employing two different batch-file 110 # templates. This script expects to find both a BATCH_TEMPLATE/batch-${COMPILER} and 111 # a BATCH_TEMPLATE/batch-mpmd-${COMPILER} template. If your test system doesn't 112 # require this distinction, simply make both files identical. 113 #================================================================================= 114 # Initially copy standard (SPMD) template for attached mode tests 106 115 cd ${SETTE_DIR} 107 116 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 124 133 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_XIOS_LR -r GYRE_XIOS -j 8 125 134 cd ${SETTE_DIR} 126 . param.cfg127 . all_functions.sh128 . prepare_exe_dir.sh135 . ./param.cfg 136 . ./all_functions.sh 137 . ./prepare_exe_dir.sh 129 138 JOB_FILE=${EXE_DIR}/run_job.sh 130 139 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 154 163 export USING_MPMD="false" 155 164 cd ${SETTE_DIR} 156 . prepare_exe_dir.sh165 . ./prepare_exe_dir.sh 157 166 JOB_FILE=${EXE_DIR}/run_job.sh 158 167 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 182 191 export USING_MPMD="true" 183 192 cd ${SETTE_DIR} 184 . prepare_exe_dir.sh 193 # 194 # Copy MPMD job_batch_COMPILER file for specific compiler into job_batch_template 195 cp BATCH_TEMPLATE/batch-mpmd-${COMPILER} job_batch_template || exit 196 # 197 . ./prepare_exe_dir.sh 185 198 JOB_FILE=${EXE_DIR}/run_job.sh 186 199 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 209 222 export USING_MPMD="true" 210 223 cd ${SETTE_DIR} 211 . prepare_exe_dir.sh224 . ./prepare_exe_dir.sh 212 225 JOB_FILE=${EXE_DIR}/run_job.sh 213 226 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 246 259 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_XIOS_HR -r GYRE_XIOS -j 8 247 260 cd ${SETTE_DIR} 248 . param.cfg 249 . all_functions.sh 250 . prepare_exe_dir.sh 261 # 262 # Copy SPMD job_batch_COMPILER file for specific compiler into job_batch_template 263 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit 264 # 265 . ./param.cfg 266 . ./all_functions.sh 267 . ./prepare_exe_dir.sh 268 # 251 269 JOB_FILE=${EXE_DIR}/run_job.sh 252 270 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 278 296 export USING_MPMD="false" 279 297 cd ${SETTE_DIR} 280 . prepare_exe_dir.sh 298 # 299 # Copy SPMD job_batch_COMPILER file for specific compiler into job_batch_template 300 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit 301 # 302 . ./prepare_exe_dir.sh 303 # 281 304 JOB_FILE=${EXE_DIR}/run_job.sh 282 305 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 306 329 export USING_MPMD="true" 307 330 cd ${SETTE_DIR} 308 . prepare_exe_dir.sh 331 # 332 # Copy MPMD job_batch_COMPILER file for specific compiler into job_batch_template 333 cp BATCH_TEMPLATE/batch-mpmd-${COMPILER} job_batch_template || exit 334 # 335 . ./prepare_exe_dir.sh 336 # 309 337 JOB_FILE=${EXE_DIR}/run_job.sh 310 338 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi … … 334 362 export USING_MPMD="true" 335 363 cd ${SETTE_DIR} 336 . prepare_exe_dir.sh364 . ./prepare_exe_dir.sh 337 365 JOB_FILE=${EXE_DIR}/run_job.sh 338 366 if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
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