- Timestamp:
- 2021-02-22T17:37:38+01:00 (4 years ago)
- Location:
- NEMO/trunk/doc/latex
- Files:
-
- 19 edited
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NEMO/trunk/doc/latex/NEMO/subfiles/apdx_DOMAINcfg.tex
r14375 r14526 42 42 43 43 \begin{listing} 44 % \nlst{namdom_domcfg}45 44 \begin{forlines} 46 45 !----------------------------------------------------------------------- … … 409 408 410 409 \begin{listing} 411 % \nlst{namzgr_sco_domcfg}412 410 \caption{\forcode{&namzgr_sco_domcfg}} 413 411 \label{lst:namzgr_sco_domcfg} -
NEMO/trunk/doc/latex/NEMO/subfiles/apdx_triads.tex
r14257 r14526 2 2 3 3 \begin{document} 4 5 %% Local cmds6 \newcommand{\rML}[1][i]{\ensuremath{_{\mathrm{ML}\,#1}}}7 \newcommand{\rMLt}[1][i]{\tilde{r}_{\mathrm{ML}\,#1}}8 %% Move to ../../global/new_cmds.tex to avoid error with \listoffigures9 %\newcommand{\triad}[6][]{\ensuremath{{}_{#2}^{#3}{\mathbb{#4}_{#1}}_{#5}^{\,#6}}10 \newcommand{\triadd}[5]{\ensuremath{{}_{#1}^{#2}{\mathbb{#3}}_{#4}^{\,#5}}}11 \newcommand{\triadt}[5]{\ensuremath{{}_{#1}^{#2}{\tilde{\mathbb{#3}}}_{#4}^{\,#5}}}12 \newcommand{\rtriad}[2][]{\ensuremath{\triad[#1]{i}{k}{#2}{i_p}{k_p}}}13 \newcommand{\rtriadt}[1]{\ensuremath{\triadt{i}{k}{#1}{i_p}{k_p}}}14 4 15 5 \chapter{Iso-Neutral Diffusion and Eddy Advection using Triads} -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_ASM.tex
r14257 r14526 148 148 the ORCA2 grid. 149 149 150 \begin{listing} 151 \nlst{nam_asminc} 152 \caption{\forcode{&nam_asminc}} 153 \label{lst:nam_asminc} 154 \end{listing} 150 \nlst{nam_asminc} 155 151 156 152 The header of an assimilation increments file produced using the NetCDF tool -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_DIA.tex
r14257 r14526 1331 1331 setting the \np{ln_nc4zip}{ln\_nc4zip} logical to false in the \nam{nc4}{nc4} namelist: 1332 1332 1333 \begin{listing} 1334 \nlst{namnc4} 1335 \caption{\forcode{&namnc4}} 1336 \label{lst:namnc4} 1337 \end{listing} 1333 \nlst{namnc4} 1338 1334 1339 1335 If \key{netcdf4} has not been defined, these namelist parameters are not read. … … 1429 1425 \label{sec:DIA_trd} 1430 1426 1431 \begin{listing} 1432 \nlst{namtrd} 1433 \caption{\forcode{&namtrd}} 1434 \label{lst:namtrd} 1435 \end{listing} 1427 \nlst{namtrd} 1436 1428 1437 1429 Each trend of the dynamics and/or temperature and salinity time evolution equations can be send to … … 1468 1460 \label{sec:DIA_FLO} 1469 1461 1470 \begin{listing} 1471 \nlst{namflo} 1472 \caption{\forcode{&namflo}} 1473 \label{lst:namflo} 1474 \end{listing} 1462 \nlst{namflo} 1475 1463 1476 1464 The on-line computation of floats advected either by the three dimensional velocity field or constraint to … … 1571 1559 \label{sec:DIA_diag_dct} 1572 1560 1573 \begin{listing} 1574 \nlst{nam_diadct} 1575 \caption{\forcode{&nam_diadct}} 1576 \label{lst:nam_diadct} 1577 \end{listing} 1561 \nlst{nam_diadct} 1578 1562 1579 1563 A module is available to compute the transport of volume, heat and salt through sections. … … 1943 1927 the Indo-Pacific mask been deduced from the sum of the Indian and Pacific mask (\autoref{fig:DIA_mask_subasins}). 1944 1928 1945 \begin{listing}1946 1929 % \nlst{namptr} 1947 \caption{\forcode{&namptr}}1948 \label{lst:namptr}1949 \end{listing}1950 1930 1951 1931 %% ================================================================================================= 1952 1932 \subsection{25 hour mean output for tidal models} 1953 1933 1954 \begin{listing} 1955 \nlst{nam_dia25h} 1956 \caption{\forcode{&nam_dia25h}} 1957 \label{lst:nam_dia25h} 1958 \end{listing} 1934 \nlst{nam_dia25h} 1959 1935 1960 1936 A module is available to compute a crudely detided M2 signal by obtaining a 25 hour mean. -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_DIU.tex
r14257 r14526 43 43 Both the cool skin and warm layer models are controlled through the namelist \nam{diu}{diu}: 44 44 45 \begin{listing} 46 \nlst{namdiu} 47 \caption{\forcode{&namdiu}} 48 \label{lst:namdiu} 49 \end{listing} 45 \nlst{namdiu} 50 46 51 47 This namelist contains only two variables: 48 52 49 \begin{description} 53 50 \item [{\np{ln_diurnal}{ln\_diurnal}}] A logical switch for turning on/off both the cool skin and warm layer. -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_DOM.tex
r14433 r14526 456 456 \label{subsec:DOM_zgr} 457 457 458 \begin{listing} 459 \nlst{namdom} 460 \caption{\forcode{&namdom}} 461 \label{lst:namdom} 462 \end{listing} 458 \nlst{namdom} 463 459 464 460 In the vertical, the model mesh is determined by four things: … … 670 666 \label{sec:DOM_DTA_tsd} 671 667 672 \begin{listing} 673 \nlst{namtsd} 674 \caption{\forcode{&namtsd}} 675 \label{lst:namtsd} 676 \end{listing} 668 \nlst{namtsd} 677 669 678 670 Basic initial state options are defined in \nam{tsd}{tsd}. -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_DYN.tex
r14257 r14526 168 168 \label{sec:DYN_adv_cor_vect} 169 169 170 \begin{listing} 171 \nlst{namdyn_adv} 172 \caption{\forcode{&namdyn_adv}} 173 \label{lst:namdyn_adv} 174 \end{listing} 170 \nlst{namdyn_adv} 175 171 176 172 The vector invariant form of the momentum equations is the one most often used in … … 187 183 \label{subsec:DYN_vor} 188 184 189 \begin{listing} 190 \nlst{namdyn_vor} 191 \caption{\forcode{&namdyn_vor}} 192 \label{lst:namdyn_vor} 193 \end{listing} 185 \nlst{namdyn_vor} 194 186 195 187 Options are defined through the \nam{dyn_vor}{dyn\_vor} namelist variables. … … 538 530 \label{sec:DYN_hpg} 539 531 540 \begin{listing} 541 \nlst{namdyn_hpg} 542 \caption{\forcode{&namdyn_hpg}} 543 \label{lst:namdyn_hpg} 544 \end{listing} 532 \nlst{namdyn_hpg} 545 533 546 534 Options are defined through the \nam{dyn_hpg}{dyn\_hpg} namelist variables. … … 745 733 \label{sec:DYN_spg} 746 734 747 \begin{listing} 748 \nlst{namdyn_spg} 749 \caption{\forcode{&namdyn_spg}} 750 \label{lst:namdyn_spg} 751 \end{listing} 735 \nlst{namdyn_spg} 752 736 753 737 Options are defined through the \nam{dyn_spg}{dyn\_spg} namelist variables. … … 1062 1046 \label{sec:DYN_ldf} 1063 1047 1064 \begin{listing} 1065 \nlst{namdyn_ldf} 1066 \caption{\forcode{&namdyn_ldf}} 1067 \label{lst:namdyn_ldf} 1068 \end{listing} 1048 \nlst{namdyn_ldf} 1069 1049 1070 1050 Options are defined through the \nam{dyn_ldf}{dyn\_ldf} namelist variables. … … 1266 1246 by setting $\mathrm{ln\_wd\_dl} = \mathrm{.true.}$ and $\mathrm{ln\_wd\_il} = \mathrm{.false.}$. 1267 1247 1268 \begin{listing} 1269 \nlst{namwad} 1270 \caption{\forcode{&namwad}} 1271 \label{lst:namwad} 1272 \end{listing} 1248 \nlst{namwad} 1273 1249 1274 1250 The following terminology is used. The depth of the topography (positive downwards) -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_LBC.tex
r14433 r14526 30 30 \label{sec:LBC_coast} 31 31 32 \begin{listing} 33 \nlst{namlbc} 34 \caption{\forcode{&namlbc}} 35 \label{lst:namlbc} 36 \end{listing} 32 \nlst{namlbc} 37 33 38 34 %The lateral ocean boundary conditions contiguous to coastlines are Neumann conditions for heat and salt … … 230 226 \label{sec:LBC_mpp} 231 227 232 \begin{listing} 233 \nlst{nammpp} 234 \caption{\forcode{&nammpp}} 235 \label{lst:nammpp} 236 \end{listing} 228 \nlst{nammpp} 237 229 238 230 For massively parallel processing (mpp), a domain decomposition method is used. … … 339 331 \label{sec:LBC_bdy} 340 332 341 \begin{listing} 342 \nlst{nambdy} 343 \caption{\forcode{&nambdy}} 344 \label{lst:nambdy} 345 \end{listing} 346 347 \begin{listing} 348 \nlst{nambdy_dta} 349 \caption{\forcode{&nambdy_dta}} 350 \label{lst:nambdy_dta} 351 \end{listing} 333 \nlst{nambdy} 334 335 \nlst{nambdy_dta} 352 336 353 337 Options are defined through the \nam{bdy}{bdy} and \nam{bdy_dta}{bdy\_dta} namelist variables. … … 657 641 \label{subsec:LBC_bdy_tides} 658 642 659 \begin{listing} 660 \nlst{nambdy_tide} 661 \caption{\forcode{&nambdy_tide}} 662 \label{lst:nambdy_tide} 663 \end{listing} 643 \nlst{nambdy_tide} 664 644 665 645 Tidal forcing at open boundaries requires the activation of surface -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_LDF.tex
r14257 r14526 469 469 \label{sec:LDF_eiv} 470 470 471 \begin{listing} 472 \nlst{namtra_eiv} 473 \caption{\forcode{&namtra_eiv}} 474 \label{lst:namtra_eiv} 475 \end{listing} 471 \nlst{namtra_eiv} 476 472 477 473 %%gm from Triad appendix : to be incorporated.... … … 532 528 \label{sec:LDF_mle} 533 529 534 \begin{listing} 535 \nlst{namtra_mle} 536 \caption{\forcode{&namtra_mle}} 537 \label{lst:namtra_mle} 538 \end{listing} 530 \nlst{namtra_mle} 539 531 540 532 If \np[=.true.]{ln_mle}{ln\_mle} in \nam{tra_mle}{tra\_mle} namelist, a parameterization of the mixing due to unresolved mixed layer instabilities is activated (\citet{fox-kemper.ferrari.ea_JPO08}). Additional transport is computed in \rou{ldf\_mle\_trp} and added to the eulerian transport in \rou{tra\_adv} as done for eddy induced advection. -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_OBS.tex
r14257 r14526 124 124 the observation files that may be used with the observation operator. 125 125 126 \begin{listing} 127 \nlst{namobs} 128 \caption{\forcode{&namobs}} 129 \label{lst:namobs} 130 \end{listing} 126 \nlst{namobs} 131 127 132 128 The observation operator code uses the feedback observation file format for all data types. … … 913 909 914 910 \begin{listing} 915 % \nlst{namsao}916 911 \begin{forlines} 917 912 !---------------------------------------------------------------------- -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_SBC.tex
r14525 r14526 25 25 \clearpage 26 26 27 \begin{listing} 28 \nlst{namsbc} 29 \caption{\forcode{&namsbc}} 30 \label{lst:namsbc} 31 \end{listing} 27 \nlst{namsbc} 32 28 33 29 The ocean needs seven fields as surface boundary condition: … … 438 434 \label{subsec:SBC_SAS} 439 435 440 \begin{listing} 441 \nlst{namsbc_sas} 442 \caption{\forcode{&namsbc_sas}} 443 \label{lst:namsbc_sas} 444 \end{listing} 436 \nlst{namsbc_sas} 445 437 446 438 In some circumstances, it may be useful to avoid calculating the 3D temperature, … … 503 495 % parameterization'' (i.e NCAR, COARE, ECMWF...) 504 496 505 \begin{listing} 506 \nlst{namsbc_flx} 507 \caption{\forcode{&namsbc_flx}} 508 \label{lst:namsbc_flx} 509 \end{listing} 497 \nlst{namsbc_flx} 510 498 511 499 In the flux formulation (\np[=.true.]{ln_flx}{ln\_flx}), … … 525 513 % L. Brodeau, December 2019... % 526 514 527 \begin{listing} 528 \nlst{namsbc_blk} 529 \caption{\forcode{&namsbc_blk}} 530 \label{lst:namsbc_blk} 531 \end{listing} 515 \nlst{namsbc_blk} 532 516 533 517 If the bulk formulation is selected (\np[=.true.]{ln_blk}{ln\_blk}), the air-sea … … 884 868 \label{sec:SBC_cpl} 885 869 886 \begin{listing} 887 \nlst{namsbc_cpl} 888 \caption{\forcode{&namsbc_cpl}} 889 \label{lst:namsbc_cpl} 890 \end{listing} 870 \nlst{namsbc_cpl} 891 871 892 872 In the coupled formulation of the surface boundary condition, … … 920 900 \label{sec:SBC_apr} 921 901 922 \begin{listing} 923 \nlst{namsbc_apr} 924 \caption{\forcode{&namsbc_apr}} 925 \label{lst:namsbc_apr} 926 \end{listing} 902 \nlst{namsbc_apr} 927 903 928 904 The optional atmospheric pressure can be used to force ocean and ice dynamics … … 956 932 \label{sec:SBC_TDE} 957 933 958 \begin{listing} 959 \nlst{nam_tide} 960 \caption{\forcode{&nam_tide}} 961 \label{lst:nam_tide} 962 \end{listing} 934 \nlst{nam_tide} 963 935 964 936 \subsection{Tidal constituents} … … 1043 1015 \label{sec:SBC_rnf} 1044 1016 1045 \begin{listing} 1046 \nlst{namsbc_rnf} 1047 \caption{\forcode{&namsbc_rnf}} 1048 \label{lst:namsbc_rnf} 1049 \end{listing} 1017 \nlst{namsbc_rnf} 1050 1018 1051 1019 %River runoff generally enters the ocean at a nonzero depth rather than through the surface. … … 1181 1149 \label{sec:SBC_isf} 1182 1150 1183 \begin{listing} 1184 \nlst{namisf} 1185 \caption{\forcode{&namisf}} 1186 \label{lst:namisf} 1187 \end{listing} 1151 \nlst{namisf} 1188 1152 1189 1153 The namelist variable in \nam{isf}{isf}, \np{ln_isf}{ln\_isf}, controls the ice shelf interactions: … … 1491 1455 \label{sec:SBC_ICB_icebergs} 1492 1456 1493 \begin{listing} 1494 \nlst{namberg} 1495 \caption{\forcode{&namberg}} 1496 \label{lst:namberg} 1497 \end{listing} 1457 \nlst{namberg} 1498 1458 1499 1459 Icebergs are modelled as lagrangian particles in \NEMO\ \citep{marsh.ivchenko.ea_GMD15}. … … 1564 1524 \label{sec:SBC_wave} 1565 1525 1566 \begin{listing} 1567 \nlst{namsbc_wave} 1568 \caption{\forcode{&namsbc_wave}} 1569 \label{lst:namsbc_wave} 1570 \end{listing} 1526 \nlst{namsbc_wave} 1571 1527 1572 1528 Ocean waves represent the interface between the ocean and the atmosphere, so \NEMO\ is extended to incorporate … … 1818 1774 \label{subsec:SBC_ssr} 1819 1775 1820 \begin{listing} 1821 \nlst{namsbc_ssr} 1822 \caption{\forcode{&namsbc_ssr}} 1823 \label{lst:namsbc_ssr} 1824 \end{listing} 1776 \nlst{namsbc_ssr} 1825 1777 1826 1778 Options are defined through the \nam{sbc_ssr}{sbc\_ssr} namelist variables. … … 1927 1879 \label{subsec:SBC_fwb} 1928 1880 1929 \begin{listing} 1930 \nlst{namsbc_fwb} 1931 \caption{\forcode{&namsbc_fwb}} 1932 \label{lst:namsbc_fwb} 1933 \end{listing} 1881 \nlst{namsbc_fwb} 1934 1882 1935 1883 For global ocean simulations, it can be useful to introduce a control of the -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_STO.tex
r14257 r14526 181 181 (only the subset for equation of state stochastic parametrisation is listed below): 182 182 183 \begin{listing} 184 \nlst{namsto} 185 \caption{\forcode{&namsto}} 186 \label{lst:namsto} 187 \end{listing} 183 \nlst{namsto} 188 184 189 185 The variables of stochastic paramtetrisation itself (based on the global 2° experiments as in \cite{brankart_OM13} are: -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_TRA.tex
r14375 r14526 76 76 \label{sec:TRA_adv} 77 77 78 \begin{listing} 79 \nlst{namtra_adv} 80 \caption{\forcode{&namtra_adv}} 81 \label{lst:namtra_adv} 82 \end{listing} 78 \nlst{namtra_adv} 83 79 84 80 When considered (\ie\ when \np{ln_traadv_OFF}{ln\_traadv\_OFF} is not set to \forcode{.true.}), … … 456 452 \label{sec:TRA_ldf} 457 453 458 \begin{listing} 459 \nlst{namtra_ldf} 460 \caption{\forcode{&namtra_ldf}} 461 \label{lst:namtra_ldf} 462 \end{listing} 454 \nlst{namtra_ldf} 463 455 464 456 Options are defined through the \nam{tra_ldf}{tra\_ldf} namelist variables. … … 772 764 \label{subsec:TRA_qsr} 773 765 774 \begin{listing} 775 \nlst{namtra_qsr} 776 \caption{\forcode{&namtra_qsr}} 777 \label{lst:namtra_qsr} 778 \end{listing} 766 \nlst{namtra_qsr} 779 767 780 768 Options are defined through the \nam{tra_qsr}{tra\_qsr} namelist variables. … … 894 882 \label{subsec:TRA_bbc} 895 883 896 \begin{listing} 897 \nlst{nambbc} 898 \caption{\forcode{&nambbc}} 899 \label{lst:nambbc} 900 \end{listing} 884 \nlst{nambbc} 901 885 902 886 \begin{figure} … … 935 919 \label{sec:TRA_bbl} 936 920 937 \begin{listing} 938 \nlst{nambbl} 939 \caption{\forcode{&nambbl}} 940 \label{lst:nambbl} 941 \end{listing} 921 \nlst{nambbl} 942 922 943 923 Options are defined through the \nam{bbl}{bbl} namelist variables. … … 1097 1077 \label{sec:TRA_dmp} 1098 1078 1099 \begin{listing} 1100 \nlst{namtra_dmp} 1101 \caption{\forcode{&namtra_dmp}} 1102 \label{lst:namtra_dmp} 1103 \end{listing} 1079 \nlst{namtra_dmp} 1104 1080 1105 1081 In some applications it can be useful to add a Newtonian damping term into … … 1188 1164 \label{sec:TRA_eosbn2} 1189 1165 1190 \begin{listing} 1191 \nlst{nameos} 1192 \caption{\forcode{&nameos}} 1193 \label{lst:nameos} 1194 \end{listing} 1166 \nlst{nameos} 1195 1167 1196 1168 %% ================================================================================================= -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_ZDF.tex
r14257 r14526 2 2 3 3 \begin{document} 4 5 %% Custom aliases6 \newcommand{\cf}{\ensuremath{C\kern-0.14em f}}7 4 8 5 \chapter{Vertical Ocean Physics (ZDF)} … … 56 53 %and thus of the formulation used (see \autoref{chap:TD}). 57 54 58 \begin{listing} 59 \nlst{namzdf} 60 \caption{\forcode{&namzdf}} 61 \label{lst:namzdf} 62 \end{listing} 55 \nlst{namzdf} 63 56 64 57 %% ================================================================================================= … … 86 79 \label{subsec:ZDF_ric} 87 80 88 \begin{listing} 89 \nlst{namzdf_ric} 90 \caption{\forcode{&namzdf_ric}} 91 \label{lst:namzdf_ric} 92 \end{listing} 81 \nlst{namzdf_ric} 93 82 94 83 When \np[=.true.]{ln_zdfric}{ln\_zdfric}, a local Richardson number dependent formulation for the vertical momentum and … … 142 131 \label{subsec:ZDF_tke} 143 132 144 \begin{listing} 145 \nlst{namzdf_tke} 146 \caption{\forcode{&namzdf_tke}} 147 \label{lst:namzdf_tke} 148 \end{listing} 133 \nlst{namzdf_tke} 149 134 150 135 The vertical eddy viscosity and diffusivity coefficients are computed from a TKE turbulent closure model based on … … 420 405 \label{subsec:ZDF_gls} 421 406 422 \begin{listing} 423 \nlst{namzdf_gls} 424 \caption{\forcode{&namzdf_gls}} 425 \label{lst:namzdf_gls} 426 \end{listing} 407 \nlst{namzdf_gls} 427 408 428 409 The Generic Length Scale (GLS) scheme is a turbulent closure scheme based on two prognostic equations: … … 539 520 \label{subsec:ZDF_osm} 540 521 541 \begin{listing} 542 \nlst{namzdf_osm} 543 \caption{\forcode{&namzdf_osm}} 544 \label{lst:namzdf_osm} 545 \end{listing} 522 \nlst{namzdf_osm} 546 523 547 524 %-------------------------------------------------------------------------------------------------------------- … … 1078 1055 \label{sec:ZDF_drg} 1079 1056 1080 \begin{listing} 1081 \nlst{namdrg} 1082 \caption{\forcode{&namdrg}} 1083 \label{lst:namdrg} 1084 \end{listing} 1085 \begin{listing} 1086 \nlst{namdrg_top} 1087 \caption{\forcode{&namdrg_top}} 1088 \label{lst:namdrg_top} 1089 \end{listing} 1090 \begin{listing} 1091 \nlst{namdrg_bot} 1092 \caption{\forcode{&namdrg_bot}} 1093 \label{lst:namdrg_bot} 1094 \end{listing} 1057 \nlst{namdrg} 1058 1059 \nlst{namdrg_top} 1060 1061 \nlst{namdrg_bot} 1095 1062 1096 1063 Options to define the top and bottom friction are defined through the \nam{drg}{drg} namelist variables. … … 1346 1313 \label{subsec:ZDF_tmx_new} 1347 1314 1348 \begin{listing} 1349 \nlst{namzdf_iwm} 1350 \caption{\forcode{&namzdf_iwm}} 1351 \label{lst:namzdf_iwm} 1352 \end{listing} 1315 \nlst{namzdf_iwm} 1353 1316 1354 1317 The parameterization of mixing induced by breaking internal waves is a generalization of … … 1562 1525 by only a few extra physics choices namely: 1563 1526 1564 \begin{ verbatim}1527 \begin{forlines} 1565 1528 ln_dynldf_OFF = .false. 1566 1529 ln_dynldf_lap = .true. … … 1570 1533 nn_fct_h = 2 1571 1534 nn_fct_v = 2 1572 \end{ verbatim}1535 \end{forlines} 1573 1536 1574 1537 \noindent which were chosen to provide a slightly more stable and less noisy solution. The -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_cfgs.tex
r14257 r14526 35 35 Configuration is defined manually through the \nam{cfg}{cfg} namelist variables. 36 36 37 \begin{listing} 38 \nlst{namcfg} 39 \caption{\forcode{&namcfg}} 40 \label{lst:namcfg} 41 \end{listing} 37 \nlst{namcfg} 42 38 43 39 %% ================================================================================================= -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_misc.tex
r14303 r14526 12 12 {\footnotesize 13 13 \begin{tabularx}{\textwidth}{l||X|X} 14 Release & Author(s) & Modifications\\14 Release & Author(s) & Modifications \\ 15 15 \hline 16 {\em X.X} & {\em Pierre Mathiot} & { update of the closed sea section}17 {\em 4.0} & {\em ... } & {\em ...} \\18 {\em 3.6} & {\em ... } & {\em ...} \\19 {\em 3.4} & {\em ... } & {\em ...} \\20 {\em <=3.4} & {\em ... } & {\em ...}16 {\em X.X} & {\em Pierre Mathiot} & {Update of the closed sea section} \\ 17 {\em 4.0} & {\em ... } & {\em ... } \\ 18 {\em 3.6} & {\em ... } & {\em ... } \\ 19 {\em 3.4} & {\em ... } & {\em ... } \\ 20 {\em <=3.4} & {\em ... } & {\em ... } 21 21 \end{tabularx} 22 22 } … … 112 112 \label{sec:MISC_closea} 113 113 114 \begin{listing} 115 \nlst{namclo} 116 \caption{\forcode{&namclo}} 117 \label{lst:namclo} 118 \end{listing} 114 \nlst{namclo} 119 115 120 116 Some configurations include inland seas and lakes as ocean … … 330 326 \label{sec:MISC_opt} 331 327 332 \begin{listing} 333 \nlst{namctl} 334 \caption{\forcode{&namctl}} 335 \label{lst:namctl} 336 \end{listing} 328 \nlst{namctl} 337 329 338 330 Options are defined through the \nam{ctl}{ctl} namelist variables. -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_model_basics_zstar.tex
r14257 r14526 83 83 84 84 %\nlst{nam_dynspg} 85 85 86 Options are defined through the \nam{_dynspg}{\_dynspg} namelist variables. 86 87 The surface pressure gradient term is related to the representation of the free surface (\autoref{sec:MB_hor_pg}). -
NEMO/trunk/doc/latex/NEMO/subfiles/chap_time_domain.tex
r14257 r14526 12 12 {\footnotesize 13 13 \begin{tabularx}{0.5\textwidth}{l||X|X} 14 Release & Author(s) & 14 Release & Author(s) & 15 15 Modifications \\ 16 16 \hline 17 {\em 4.0} & {\em J\'{e}r\^{o}me Chanut \newline Tim Graham} & 17 {\em 4.0} & {\em J\'{e}r\^{o}me Chanut \newline Tim Graham} & 18 18 {\em Review \newline Update } \\ 19 {\em 3.6} & {\em Christian \'{E}th\'{e} } & 19 {\em 3.6} & {\em Christian \'{E}th\'{e} } & 20 20 {\em Update } \\ 21 {\em $\leq$ 3.4} & {\em Gurvan Madec } & 21 {\em $\leq$ 3.4} & {\em Gurvan Madec } & 22 22 {\em First version } \\ 23 23 \end{tabularx} … … 44 44 45 45 The time stepping used in \NEMO\ is a three level scheme that can be represented as follows: 46 46 47 \begin{equation} 47 48 \label{eq:TD} 48 49 x^{t + \rdt} = x^{t - \rdt} + 2 \, \rdt \ \text{RHS}_x^{t - \rdt, \, t, \, t + \rdt} 49 50 \end{equation} 51 50 52 where $x$ stands for $u$, $v$, $T$ or $S$; 51 53 RHS is the \textbf{R}ight-\textbf{H}and-\textbf{S}ide of the corresponding time evolution equation; … … 97 99 first designed by \citet{robert_JMSJ66} and more comprehensively studied by \citet{asselin_MWR72}, 98 100 is a kind of laplacian diffusion in time that mixes odd and even time steps: 101 99 102 \begin{equation} 100 103 \label{eq:TD_asselin} 101 104 x_F^t = x^t + \gamma \, \lt[ x_F^{t - \rdt} - 2 x^t + x^{t + \rdt} \rt] 102 105 \end{equation} 106 103 107 where the subscript $F$ denotes filtered values and $\gamma$ is the Asselin coefficient. 104 108 $\gamma$ is initialized as \np{rn_atfp}{rn\_atfp} (namelist parameter). … … 132 136 The conditions for stability of second and fourth order horizontal diffusion schemes are 133 137 \citep{griffies_bk04}: 138 134 139 \begin{equation} 135 140 \label{eq:TD_euler_stability} … … 140 145 \end{cases} 141 146 \end{equation} 147 142 148 where $e$ is the smallest grid size in the two horizontal directions and 143 149 $A^h$ is the mixing coefficient. … … 151 157 To overcome the stability constraint, a backward (or implicit) time differencing scheme is used. 152 158 This scheme is unconditionally stable but diffusive and can be written as follows: 159 153 160 \begin{equation} 154 161 \label{eq:TD_imp} … … 168 175 where RHS is the right hand side of the equation except for the vertical diffusion term. 169 176 We rewrite \autoref{eq:TD_imp} as: 177 170 178 \begin{equation} 171 179 \label{eq:TD_imp_mat} 172 180 -c(k + 1) \; T^{t + 1}(k + 1) + d(k) \; T^{t + 1}(k) - \; c(k) \; T^{t + 1}(k - 1) \equiv b(k) 173 181 \end{equation} 182 174 183 where 184 175 185 \[ 176 186 c(k) = A_w^{vT} (k) \, / \, e_{3w} (k) \text{,} \quad … … 239 249 $Q$ is redistributed over several time step. 240 250 In the modified LF-RA environment, these two formulations have been replaced by: 251 241 252 \begin{gather} 242 253 \label{eq:TD_forcing} … … 246 257 - \gamma \, \rdt \, \lt( Q^{t + \rdt / 2} - Q^{t - \rdt / 2} \rt) 247 258 \end{gather} 259 248 260 The change in the forcing formulation given by \autoref{eq:TD_forcing} 249 261 (see \autoref{fig:TD_MLF_forcing}) has a significant effect: … … 290 302 \label{sec:TD_rst} 291 303 292 \begin{listing} 293 \nlst{namrun} 294 \caption{\forcode{&namrun}} 295 \label{lst:namrun} 296 \end{listing} 304 \nlst{namrun} 297 305 298 306 The first time step of this three level scheme when starting from initial conditions is … … 375 383 % 376 384 \end{flalign*} 385 377 386 \begin{flalign*} 378 387 \allowdisplaybreaks … … 387 396 % 388 397 \end{flalign*} 398 389 399 \begin{flalign*} 390 400 \allowdisplaybreaks -
NEMO/trunk/doc/latex/global/highlighting.tex
r14257 r14526 29 29 30 30 %% Namelists inclusion 31 \newcommand{\nlst}[1]{\forfile{../../../namelists/#1}} 32 %\newcommand{\nlst}[1]{ 33 % \begin{listing} 34 % \newmintedfile{fortran}{../../../namelists/#1} 35 % \caption{\forcode{}} 36 % \label{lst:#1} 37 % \end{listing} 38 %} 31 \newcommand{\nlst}[1]{ 32 \begin{listing} 33 \newmintedfile{fortran}{../../../namelists/#1} 34 \caption{\forcode{}} 35 \label{lst:#1} 36 \end{listing} 37 }
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