Changeset 11019 for NEMO/trunk/doc/latex/TOP/subfiles

Timestamp:

2019-05-20T22:21:43+02:00 (5 years ago)

Author:

nicolasmartin

Message:

Apply more or less same modifications on TOP as for SI³ for compliance
Despite remaining issues with references, TOP manual can be build like NEMO & SI³ with ./build_manual.sh TOP
For the record, the building of the 3 manuals can be launched with ./manual_build.sh all

Location:

NEMO/trunk/doc/latex/TOP/subfiles

Files:

• . (moved) (moved from NEMO/trunk/doc/latex/TOP/tex_sub)
• introduction.tex (modified) (1 diff)
• model_description.tex (modified) (15 diffs)
• model_setup.tex (modified) (1 diff)

NEMO/trunk/doc/latex/TOP/subfiles/introduction.tex

@@ -37 +37 @@
 \begin{center}
 \vspace{0cm}
-\includegraphics[width=0.80\textwidth]{../Figures/Fig_TOP_design.png}
-%\includegraphics[height=6cm,angle=-00]{../Figures/Fig_TOP_design.png}
+\includegraphics[width=0.80\textwidth]{Fig_TOP_design}
+%\includegraphics[height=6cm,angle=-00]{Fig_TOP_design}
 \caption{A schematic view of NEMO-TOP component}
 \label{topdesign}

NEMO/trunk/doc/latex/TOP/subfiles/model_description.tex

@@ -71 +71 @@
  \subsection{ Advection}
 %------------------------------------------namtrc_adv----------------------------------------------------
-\forfile{../namelists/namtrc_adv}
+\nlst{namtrc_adv}
 %-------------------------------------------------------------------------------------------------------------
 The advection schemes used for the passive tracers are the same than the ones for $T$ and $S$ and described in section 5.1 of \citep{Madec_Bk2008}. The choice of an advection scheme  can be selected independently and  can differ from the ones used for active tracers. This choice is made in the \textit{namtrc\_adv} namelist, by  setting to \textit{true} one and only one of the logicals \textit{ln\_trcadv\_xxx}, the same way of what is done for dynamics.
@@ -78 +78 @@
  \subsection{ Lateral diffusion}
 %------------------------------------------namtrc_ldf----------------------------------------------------
-\forfile{../namelists/namtrc_ldf}
+\nlst{namtrc_ldf}
 %-------------------------------------------------------------------------------------------------------------
 In NEMO v4.0, the passive tracer diffusion has necessarily the same form as the active tracer diffusion, meaning that the numerical scheme must be the same. However the passive tracer mixing coefficient can be chosen as a multiple of the active ones by changing the value of \textit{rn\_ldf\_multi} in namelist \textit{namtrc\_ldf}. The choice of numerical scheme is then set  in the \ngn{namtra\_ldf} namelist for the dynamic described in section 5.2 of \citep{Madec_Bk2008}. 
@@ -91 +91 @@
  
 %------------------------------------------namtrc_dmp----------------------------------------------------
-\forfile{../namelists/namtrc_dmp}
+\nlst{namtrc_dmp}
 %-------------------------------------------------------------------------------------------------------------
 
@@ -100 +100 @@
  
 %------------------------------------------namtrc_rad----------------------------------------------------
-\forfile{../namelists/namtrc_rad}
+\nlst{namtrc_rad}
 %-------------------------------------------------------------------------------------------------------------
 
@@ -110 +110 @@
 \label{SMS_models}
 %------------------------------------------namtrc_sms----------------------------------------------------
-%\forfile{../namelists/namtrc}
+%\nlst{namtrc}
 %-------------------------------------------------------------------------------------------------------------
 
@@ -116 +116 @@
 %------------------------------------------namage----------------------------------------------------
 %
-\forfile{../namelists/namage}
+\nlst{namage}
 %----------------------------------------------------------------------------------------------------------
 
@@ -151 +151 @@
 %------------------------------------------namage----------------------------------------------------
 %
-\forfile{../namelists/namcfc}
+\nlst{namcfc}
 %----------------------------------------------------------------------------------------------------------
 
@@ -324 +324 @@
 \begin{figure}[!h]
 \centering
-\includegraphics[width=0.80\textwidth]{../Figures/CFC-atm-evol.png}
+\includegraphics[width=0.80\textwidth]{CFC-atm-evol}
   \caption{Atmospheric CFC11, CFC12 and SF6 partial pressure evolution in both hemispheres.}
 \label{img_cfcatm}
@@ -331 +331 @@
 \begin{figure}[!h]
 \centering
-\includegraphics[width=0.80\textwidth]{../Figures/CFC_solub.png}
+\includegraphics[width=0.80\textwidth]{CFC_solub}
   \caption{CFC11 solubility in mol m$^{-3}$ pptv$^{-1}$, calculated from the World Ocean Atlas 2013 temperature and salinity annual climatology.}
 \label{img_cfcsol}
@@ -338 +338 @@
 \begin{figure}[!h]
 \centering
-\includegraphics[width=0.80\textwidth]{../Figures/CFC_inventory.png}
+\includegraphics[width=0.80\textwidth]{CFC_inventory}
   \caption{CFC11 vertical inventory in $\mu$mol m$^{-2}$, from one of the UK Earth System Model 1 model (UKESM1 - which uses NEMO as ocean component, with TOP for the passive tracers) historical run at year 2000.}
 \label{img_cfcinv}
@@ -348 +348 @@
 %------------------------------------------namage----------------------------------------------------
 %
-\forfile{../namelists/namc14}
+\nlst{namc14_fcg}
+\nlst{namc14_typ}
+\nlst{namc14_sbc}
 %----------------------------------------------------------------------------------------------------------
 
@@ -444 +446 @@
 \begin{figure}[!h]
 \begin{center}
-\includegraphics[width=0.9\hsize]{../Figures/drift-EXP06.png}
+\includegraphics[width=0.9\hsize]{drift-EXP06}
 \end{center}
 \vspace{-4ex}
@@ -456 +458 @@
 \begin{figure}[!h]
 \begin{center}
-\includegraphics[width=0.9\hsize]{../Figures/C14bombCO2-NB.png}
+\includegraphics[width=0.9\hsize]{C14bombCO2-NB}
 \end{center}
 \vspace{-4ex}
@@ -485 +487 @@
 \begin{figure}[!h]
 \begin{center}
-\includegraphics[width=0.9\hsize]{../Figures/PaleoCO2C14-NB.png}
+\includegraphics[width=0.9\hsize]{PaleoCO2C14-NB}
 \end{center}
 \vspace{-4ex}
@@ -591 +593 @@
 
 %------------------------------------------namtrc_sms----------------------------------------------------
-\forfile{../namelists/namdta_dyn}
+\nlst{namdta_dyn}
 %-------------------------------------------------------------------------------------------------------------
 

NEMO/trunk/doc/latex/TOP/subfiles/model_setup.tex

@@ -7 +7 @@
 \section{ Setting up a passive tracer configuration}
 %------------------------------------------namtrc_int----------------------------------------------------
-\forfile{../namelists/namtrc}
+\nlst{namtrc}
 %-------------------------------------------------------------------------------------------------------------