source:
utils/CI/sette/BATCH_TEMPLATE/batch-X64_KARA_GNU_OMPI
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14948
Last change on this file since 14948 was 14948, checked in by gsamson, 3 years ago | |
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1 | #!/usr/bin/env bash |
2 | |
3 | #SBATCH -J sette |
4 | #SBATCH -o sette.%j.out |
5 | #SBATCH -e sette.%j.err |
6 | #SBATCH -N NODES |
7 | #SBATCH --ntasks-per-node=32 |
8 | #SBATCH -p mono |
9 | #SBATCH -q normal |
10 | #SBATCH --time=01:00:00 |
11 | #SBATCH --exclusive |
12 | |
13 | # Test specific settings. Do not hand edit these lines; the fcm_job.sh script will set these |
14 | # (via sed operating on this template job file). |
15 | # |
16 | OCEANCORES=NPROCS |
17 | export SETTE_DIR=DEF_SETTE_DIR |
18 | |
19 | ############################################################### |
20 | # |
21 | export MPIRUN="mpirun --map-by node --bind-to core" |
22 | # |
23 | # load sette functions (only post_test_tidyup needed) |
24 | . ${SETTE_DIR}/all_functions.sh |
25 | |
26 | # modules to load |
27 | module purge |
28 | module load gcc/9.3.0 openmpi/4.0.5_gcc9.3.0 hdf5/1.8.18_gcc9.3.0 netcdf/4.7.1_gcc9.3.0 xios/trunk_rev2136_gcc9.3.0 |
29 | export XIO_HOME=${XIOS_DIR} |
30 | |
31 | # Don't remove neither change the following line |
32 | # BODY |
33 | |
34 | # |
35 | # These variables are needed by post_test_tidyup function in all_functions.sh |
36 | # |
37 | export INPUT_DIR=DEF_INPUT_DIR |
38 | export CONFIG_DIR=DEF_CONFIG_DIR |
39 | export TOOLS_DIR=DEF_TOOLS_DIR |
40 | export NEMO_VALIDATION_DIR=DEF_NEMO_VALIDATION |
41 | export NEW_CONF=DEF_NEW_CONF |
42 | export CMP_NAM=DEF_CMP_NAM |
43 | export TEST_NAME=DEF_TEST_NAME |
44 | export EXE_DIR=DEF_EXE_DIR |
45 | ulimit -a |
46 | ulimit -s unlimited |
47 | # |
48 | # end of set up |
49 | ############################################################### |
50 | # |
51 | # change to the working directory |
52 | # |
53 | cd ${EXE_DIR} |
54 | echo Running on host `hostname` |
55 | echo Time is `date` |
56 | echo Directory is `pwd` |
57 | # |
58 | # Run the parallel MPI executable |
59 | # |
60 | echo "Running time ${MPIRUN} ./nemo" |
61 | # |
62 | if [ MPI_FLAG == "yes" ]; then |
63 | ${MPIRUN} -n $OCEANCORES ./nemo |
64 | else |
65 | time ./nemo |
66 | fi |
67 | |
68 | # |
69 | post_test_tidyup |
70 | |
71 | # END_BODY |
72 | # Don't remove neither change the previous line |
73 | |
74 | |
75 | exit |
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