1 | MODULE sms_pisces |
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2 | !!---------------------------------------------------------------------- |
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3 | !! *** sms_pisces.F90 *** |
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4 | !! TOP : PISCES Source Minus Sink variables |
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5 | !!---------------------------------------------------------------------- |
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6 | !! History : 1.0 ! 2000-02 (O. Aumont) original code |
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7 | !! 3.2 ! 2009-04 (C. Ethe & NEMO team) style |
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8 | !!---------------------------------------------------------------------- |
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9 | #if defined key_pisces || defined key_pisces_reduced || defined key_pisces_quota |
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10 | !!---------------------------------------------------------------------- |
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11 | !! 'key_pisces' PISCES model |
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12 | !!---------------------------------------------------------------------- |
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13 | USE par_oce |
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14 | USE par_trc |
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15 | |
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16 | IMPLICIT NONE |
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17 | PUBLIC |
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18 | |
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19 | INTEGER :: numnatp_ref = -1 !! Logical units for namelist pisces |
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20 | INTEGER :: numnatp_cfg = -1 !! Logical units for namelist pisces |
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21 | INTEGER :: numonp = -1 !! Logical unit for namelist pisces output |
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22 | |
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23 | !!* Biological fluxes for light : variables shared by pisces & lobster |
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24 | INTEGER , ALLOCATABLE, SAVE, DIMENSION(:,:) :: neln !: number of T-levels + 1 in the euphotic layer |
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25 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:) :: heup !: euphotic layer depth |
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26 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: etot !: par (photosynthetic available radiation) |
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27 | ! |
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28 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:) :: xksi !: LOBSTER : zooplakton closure |
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29 | ! !: PISCES : silicon dependant half saturation |
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30 | |
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31 | #if defined key_pisces || defined key_pisces_quota |
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32 | !!* Time variables |
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33 | INTEGER :: nrdttrc !: ??? |
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34 | INTEGER :: ndayflxtr !: ??? |
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35 | REAL(wp) :: rfact , rfactr !: ??? |
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36 | REAL(wp) :: rfact2, rfact2r !: ??? |
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37 | REAL(wp) :: xstep !: Time step duration for biology |
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38 | |
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39 | !!* Biological parameters |
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40 | INTEGER :: niter1max, niter2max !: Maximum number of iterations for sinking |
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41 | REAL(wp) :: rno3 !: ??? |
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42 | REAL(wp) :: o2ut !: ??? |
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43 | REAL(wp) :: po4r !: ??? |
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44 | REAL(wp) :: rdenit !: ??? |
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45 | REAL(wp) :: rdenita !: ??? |
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46 | REAL(wp) :: o2nit !: ??? |
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47 | REAL(wp) :: wsbio, wsbio2 !: ??? |
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48 | REAL(wp) :: xkmort !: ??? |
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49 | REAL(wp) :: ferat3 !: ??? |
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50 | |
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51 | !!* diagnostic parameters |
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52 | REAL(wp) :: tpp !: total primary production |
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53 | REAL(wp) :: t_oce_co2_exp !: total carbon export |
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54 | REAL(wp) :: t_oce_co2_flx !: Total ocean carbon flux |
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55 | REAL(wp) :: t_atm_co2_flx !: global mean of atmospheric pco2 |
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56 | |
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57 | !!* restoring |
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58 | LOGICAL :: ln_pisdmp !: restoring or not of nutrients to a mean value |
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59 | INTEGER :: nn_pisdmp !: frequency of relaxation or not of nutrients to a mean value |
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60 | |
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61 | !!* Mass conservation |
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62 | LOGICAL :: ln_check_mass !: Flag to check mass conservation |
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63 | |
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64 | !!* Biological fluxes for primary production |
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65 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:) :: xksimax !: ??? |
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66 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnanono3 !: ??? |
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67 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiatno3 !: ??? |
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68 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnanonh4 !: ??? |
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69 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiatnh4 !: ??? |
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70 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnanopo4 !: ??? |
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71 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiatpo4 !: ??? |
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72 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimphy !: ??? |
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73 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimdia !: ??? |
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74 | #if ! defined key_pisces_quota |
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75 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: concdfe !: ??? |
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76 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: concnfe !: ??? |
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77 | #endif |
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78 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimnfe !: ??? |
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79 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimdfe !: ??? |
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80 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimsi !: ??? |
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81 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: biron !: bioavailable fraction of iron |
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82 | |
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83 | !!* SMS for the organic matter |
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84 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xfracal !: ?? |
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85 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: nitrfac !: ?? |
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86 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimbac !: ?? |
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87 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimbacl !: ?? |
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88 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiss !: ?? |
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89 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: prodcal !: Calcite production |
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90 | |
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91 | !!* Variable for chemistry of the CO2 cycle |
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92 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: akb3 !: ??? |
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93 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: ak13 !: ??? |
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94 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: ak23 !: ??? |
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95 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: aksp !: ??? |
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96 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: akw3 !: ??? |
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97 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: borat !: ??? |
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98 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: hi !: ??? |
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99 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: excess !: ??? |
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100 | |
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101 | !!* Temperature dependancy of SMS terms |
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102 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: tgfunc !: Temp. dependancy of various biological rates |
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103 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: tgfunc2 !: Temp. dependancy of mesozooplankton rates |
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104 | |
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105 | !!* Array used to indicate negative tracer values |
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106 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnegtr !: ??? |
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107 | |
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108 | #if defined key_kriest |
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109 | !!* Kriest parameter for aggregation |
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110 | REAL(wp) :: xkr_eta !: Sinking exponent |
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111 | REAL(wp) :: xkr_zeta !: N content exponent |
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112 | REAL(wp) :: xkr_ncontent !: N content factor |
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113 | REAL(wp) :: xkr_massp !: |
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114 | REAL(wp) :: xkr_mass_min, xkr_mass_max !: Minimum, Maximum mass for Aggregates |
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115 | #endif |
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116 | |
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117 | #endif |
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118 | |
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119 | # if defined key_pisces_quota |
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120 | !!* Biological parameters |
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121 | REAL(wp) :: no3rat3 !: ??? |
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122 | REAL(wp) :: po4rat3 !: ??? |
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123 | |
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124 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xpicono3 !: ??? |
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125 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xpiconh4 !: ??? |
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126 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xpicopo4 !: ??? |
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127 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnanodop !: ??? |
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128 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xpicodop !: ??? |
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129 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiatdop !: ??? |
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130 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xnanofer !: ??? |
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131 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xpicofer !: ??? |
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132 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xdiatfer !: ??? |
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133 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimpic !: ??? |
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134 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xlimpfe !: ??? |
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135 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: fvnuptk |
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136 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: fvpuptk |
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137 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: fvduptk |
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138 | |
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139 | !!* Allometric variations of the quotas |
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140 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqnnmin !: ??? |
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141 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqnnmax !: ??? |
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142 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqpnmin !: ??? |
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143 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqpnmax !: ??? |
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144 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqnpmin !: ??? |
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145 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqnpmax !: ??? |
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146 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqppmin !: ??? |
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147 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqppmax !: ??? |
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148 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqndmin !: ??? |
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149 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqndmax !: ??? |
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150 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqpdmin !: ??? |
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151 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: xqpdmax !: ??? |
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152 | |
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153 | !!* SMS for the organic matter |
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154 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: sizen !: size of diatoms |
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155 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: sizep !: size of diatoms |
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156 | REAL(wp), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: sized !: size of diatoms |
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157 | |
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158 | #endif |
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159 | !!---------------------------------------------------------------------- |
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160 | !! NEMO/TOP 3.3 , NEMO Consortium (2010) |
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161 | !! $Id$ |
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162 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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163 | !!---------------------------------------------------------------------- |
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164 | CONTAINS |
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165 | |
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166 | INTEGER FUNCTION sms_pisces_alloc() |
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167 | !!---------------------------------------------------------------------- |
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168 | !! *** ROUTINE sms_pisces_alloc *** |
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169 | !!---------------------------------------------------------------------- |
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170 | USE lib_mpp , ONLY: ctl_warn |
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171 | #if defined key_pisces_quota |
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172 | INTEGER :: ierr(9) ! Local variables |
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173 | #else |
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174 | INTEGER :: ierr(6) ! Local variables |
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175 | #endif |
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176 | !!---------------------------------------------------------------------- |
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177 | ierr(:) = 0 |
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178 | !* Biological fluxes for light : shared variables for pisces & lobster |
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179 | ALLOCATE( etot(jpi,jpj,jpk), neln(jpi,jpj), heup(jpi,jpj), xksi(jpi,jpj), STAT=ierr(1) ) |
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180 | ! |
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181 | #if defined key_pisces || defined key_pisces_quota |
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182 | !* Biological fluxes for primary production |
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183 | ALLOCATE( xksimax(jpi,jpj) , biron (jpi,jpj,jpk), & |
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184 | & xnanono3(jpi,jpj,jpk), xdiatno3(jpi,jpj,jpk), & |
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185 | & xnanonh4(jpi,jpj,jpk), xdiatnh4(jpi,jpj,jpk), & |
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186 | & xnanopo4(jpi,jpj,jpk), xdiatpo4(jpi,jpj,jpk), & |
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187 | & xlimphy (jpi,jpj,jpk), xlimdia (jpi,jpj,jpk), & |
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188 | #if ! defined key_pisces_quota |
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189 | & concnfe (jpi,jpj,jpk), concdfe (jpi,jpj,jpk), & |
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190 | #endif |
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191 | & xlimnfe (jpi,jpj,jpk), xlimdfe (jpi,jpj,jpk), & |
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192 | & xlimsi (jpi,jpj,jpk), STAT=ierr(2) ) |
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193 | ! |
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194 | !* SMS for the organic matter |
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195 | ALLOCATE( xfracal (jpi,jpj,jpk), nitrfac (jpi,jpj,jpk), & |
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196 | & xlimbac (jpi,jpj,jpk), xdiss (jpi,jpj,jpk), & |
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197 | & xlimbacl(jpi,jpj,jpk), prodcal(jpi,jpj,jpk), STAT=ierr(3) ) |
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198 | |
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199 | !* Variable for chemistry of the CO2 cycle |
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200 | ALLOCATE( akb3(jpi,jpj,jpk) , ak13 (jpi,jpj,jpk) , & |
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201 | & ak23(jpi,jpj,jpk) , aksp (jpi,jpj,jpk) , & |
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202 | & akw3(jpi,jpj,jpk) , borat (jpi,jpj,jpk) , & |
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203 | & hi (jpi,jpj,jpk) , excess(jpi,jpj,jpk) , STAT=ierr(4) ) |
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204 | ! |
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205 | !* Temperature dependancy of SMS terms |
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206 | ALLOCATE( tgfunc(jpi,jpj,jpk) , tgfunc2(jpi,jpj,jpk) , STAT=ierr(5) ) |
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207 | ! |
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208 | !* Array used to indicate negative tracer values |
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209 | ALLOCATE( xnegtr(jpi,jpj,jpk) , STAT=ierr(6) ) |
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210 | #endif |
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211 | |
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212 | #if defined key_pisces_quota |
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213 | !* Biological arrays for phytoplankton growth |
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214 | ALLOCATE( xpicono3(jpi,jpj,jpk), xpiconh4(jpi,jpj,jpk), & |
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215 | & xpicopo4(jpi,jpj,jpk), xpicodop(jpi,jpj,jpk), & |
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216 | & xnanodop(jpi,jpj,jpk), xdiatdop(jpi,jpj,jpk), & |
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217 | & xnanofer(jpi,jpj,jpk), xdiatfer(jpi,jpj,jpk), & |
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218 | & xpicofer(jpi,jpj,jpk), xlimpfe (jpi,jpj,jpk), & |
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219 | & fvnuptk (jpi,jpj,jpk), fvduptk (jpi,jpj,jpk), & |
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220 | & fvpuptk (jpi,jpj,jpk), xlimpic (jpi,jpj,jpk), & |
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221 | & STAT=ierr(7) ) |
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222 | |
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223 | !* Minimum/maximum quotas of phytoplankton |
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224 | ALLOCATE( xqnnmin (jpi,jpj,jpk), xqnnmax(jpi,jpj,jpk), & |
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225 | & xqpnmin (jpi,jpj,jpk), xqpnmax(jpi,jpj,jpk), & |
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226 | & xqnpmin (jpi,jpj,jpk), xqnpmax(jpi,jpj,jpk), & |
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227 | & xqppmin (jpi,jpj,jpk), xqppmax(jpi,jpj,jpk), & |
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228 | & xqndmin (jpi,jpj,jpk), xqndmax(jpi,jpj,jpk), & |
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229 | & xqpdmin (jpi,jpj,jpk), xqpdmax(jpi,jpj,jpk), STAT=ierr(8) ) |
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230 | ! |
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231 | !* Size of phytoplankton cells |
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232 | ALLOCATE( sizen (jpi,jpj,jpk), sizep (jpi,jpj,jpk), & |
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233 | & sized (jpi,jpj,jpk), STAT=ierr(9) ) |
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234 | ! |
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235 | #endif |
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236 | |
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237 | ! |
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238 | sms_pisces_alloc = MAXVAL( ierr ) |
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239 | ! |
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240 | IF( sms_pisces_alloc /= 0 ) CALL ctl_warn('sms_pisces_alloc: failed to allocate arrays') |
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241 | ! |
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242 | END FUNCTION sms_pisces_alloc |
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243 | |
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244 | #else |
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245 | !!---------------------------------------------------------------------- |
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246 | !! Empty module : NO PISCES model |
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247 | !!---------------------------------------------------------------------- |
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248 | #endif |
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249 | |
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250 | !!====================================================================== |
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251 | END MODULE sms_pisces |
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