1 | MODULE sedrst |
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2 | #if defined key_sed |
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3 | !!====================================================================== |
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4 | !! *** MODULE sedrst *** |
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5 | !! Read and write the restart files for sediment |
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6 | !!====================================================================== |
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7 | |
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8 | !!---------------------------------------------------------------------- |
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9 | !! * Modules used |
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10 | !! ============== |
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11 | USE sed |
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12 | USE sedarr |
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13 | |
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14 | |
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15 | !! * Accessibility |
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16 | IMPLICIT NONE |
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17 | PRIVATE |
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18 | |
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19 | !! * Accessibility |
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20 | PUBLIC sed_rst_read |
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21 | PUBLIC sed_rst_wri |
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22 | |
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23 | !! * Module variables |
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24 | INTEGER, PUBLIC :: numrsr, numrsw !: logical unit for sed restart (read and write) |
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25 | |
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26 | |
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27 | !! $Id$ |
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28 | CONTAINS |
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29 | |
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30 | |
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31 | SUBROUTINE sed_rst_read |
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32 | !!---------------------------------------------------------------------- |
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33 | !! *** ROUTINE sed_rst_read *** |
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34 | !! |
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35 | !! ** Purpose : Initialization of sediment module |
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36 | !! - sets initial sediment composition |
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37 | !! ( only clay or reading restart file ) |
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38 | !! |
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39 | !! History : |
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40 | !! ! 06-07 (C. Ethe) original |
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41 | !!---------------------------------------------------------------------- |
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42 | !! * Modules used |
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43 | USE iom |
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44 | |
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45 | !! * local declarations |
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46 | INTEGER :: ji, jk, jn |
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47 | REAL(wp), ALLOCATABLE, DIMENSION(:,:,:,:) :: zdta |
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48 | REAL(wp), ALLOCATABLE, DIMENSION(:,:,: ) :: zdta1 |
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49 | REAL(wp), ALLOCATABLE, DIMENSION(:,: ) :: zhipor |
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50 | REAL(wp) :: zkt |
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51 | CHARACTER(len = 20) :: cltra |
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52 | INTEGER :: jlibalt = jprstlib |
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53 | LOGICAL :: llok |
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54 | !-------------------------------------------------------------------- |
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55 | |
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56 | |
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57 | WRITE(numsed,*) ' ' |
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58 | WRITE(numsed,*) ' Initilization of Sediment components from restart' |
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59 | WRITE(numsed,*) ' ' |
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60 | |
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61 | ALLOCATE( zdta(jpi,jpj,jpksed,jptrased), zdta1(jpi,jpj,jpksed,2), zhipor(jpoce,jpksed) ) |
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62 | |
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63 | IF ( jprstlib == jprstdimg ) THEN |
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64 | ! eventually read netcdf file (monobloc) for restarting on different number of processors |
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65 | ! if restart_sed.nc exists, then set jlibalt to jpnf90 |
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66 | INQUIRE( FILE = 'restart_sed.nc', EXIST = llok ) |
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67 | IF ( llok ) THEN ; jlibalt = jpnf90 ; ELSE ; jlibalt = jprstlib ; ENDIF |
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68 | ENDIF |
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69 | |
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70 | CALL iom_open( 'restart_sed', numrsr, kiolib = jlibalt ) |
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71 | CALL iom_get( numrsr, 'kt' , zkt ) ! time-step |
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72 | |
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73 | DO jn = 1, jptrased |
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74 | cltra = sedtrcd(jn) |
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75 | CALL iom_get( numrsr, jpdom_unknown, cltra, zdta(:,:,:,jn), & |
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76 | & kstart=(/1,1,1/), kcount=(/jpi,jpj,jpksed/) ) |
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77 | ENDDO |
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78 | |
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79 | |
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80 | CALL pack_arr( jpoce, solcp(1:jpoce,1:jpksed,jsopal), & |
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81 | & zdta(1:jpi,1:jpj,1:jpksed,1), iarroce(1:jpoce) ) |
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82 | |
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83 | CALL pack_arr( jpoce, solcp(1:jpoce,1:jpksed,jsclay), & |
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84 | & zdta(1:jpi,1:jpj,1:jpksed,2), iarroce(1:jpoce) ) |
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85 | |
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86 | CALL pack_arr( jpoce, solcp(1:jpoce,1:jpksed,jspoc), & |
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87 | & zdta(1:jpi,1:jpj,1:jpksed,3), iarroce(1:jpoce) ) |
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88 | |
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89 | CALL pack_arr( jpoce, solcp(1:jpoce,1:jpksed,jscal), & |
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90 | & zdta(1:jpi,1:jpj,1:jpksed,4), iarroce(1:jpoce) ) |
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91 | |
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92 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwsil), & |
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93 | & zdta(1:jpi,1:jpj,1:jpksed,5), iarroce(1:jpoce) ) |
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94 | |
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95 | |
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96 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwoxy), & |
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97 | & zdta(1:jpi,1:jpj,1:jpksed,6), iarroce(1:jpoce) ) |
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98 | |
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99 | |
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100 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwdic), & |
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101 | & zdta(1:jpi,1:jpj,1:jpksed,7), iarroce(1:jpoce) ) |
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102 | |
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103 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwno3), & |
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104 | & zdta(1:jpi,1:jpj,1:jpksed,8), iarroce(1:jpoce) ) |
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105 | |
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106 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwpo4), & |
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107 | & zdta(1:jpi,1:jpj,1:jpksed,9), iarroce(1:jpoce) ) |
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108 | |
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109 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwalk), & |
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110 | & zdta(1:jpi,1:jpj,1:jpksed,10), iarroce(1:jpoce) ) |
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111 | |
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112 | CALL pack_arr( jpoce, pwcp(1:jpoce,1:jpksed,jwc13), & |
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113 | & zdta(1:jpi,1:jpj,1:jpksed,11), iarroce(1:jpoce) ) |
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114 | |
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115 | DO jn = 1, 2 |
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116 | cltra = seddia3d(jn) |
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117 | CALL iom_get( numrsr, jpdom_unknown, cltra, zdta1(:,:,:,jn), & |
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118 | & kstart=(/1,1,1/), kcount=(/jpi,jpj,jpksed/) ) |
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119 | ENDDO |
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120 | |
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121 | zhipor(:,:) = 0. |
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122 | CALL pack_arr( jpoce, zhipor(1:jpoce,1:jpksed), & |
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123 | & zdta1(1:jpi,1:jpj,1:jpksed,1), iarroce(1:jpoce) ) |
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124 | |
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125 | ! Initialization of [h+] in mol/kg |
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126 | DO jk = 1, jpksed |
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127 | DO ji = 1, jpoce |
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128 | hipor (ji,jk) = 10.**( -1. * zhipor(ji,jk) ) |
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129 | ENDDO |
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130 | ENDDO |
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131 | |
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132 | CALL pack_arr( jpoce, co3por(1:jpoce,1:jpksed), & |
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133 | & zdta1(1:jpi,1:jpj,1:jpksed,2), iarroce(1:jpoce) ) |
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134 | |
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135 | ! Initialization of sediment composant only ie jk=2 to jk=jpksed |
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136 | ! ( nothing in jk=1) |
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137 | solcp(1:jpoce,1,:) = 0. |
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138 | pwcp (1:jpoce,1,:) = 0. |
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139 | |
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140 | DEALLOCATE( zdta ) |
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141 | DEALLOCATE( zdta1 ) |
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142 | DEALLOCATE( zhipor ) |
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143 | |
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144 | END SUBROUTINE sed_rst_read |
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145 | |
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146 | SUBROUTINE sed_rst_wri( kt ) |
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147 | !!---------------------------------------------------------------------- |
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148 | !! *** ROUTINE sed_rst_wri *** |
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149 | !! |
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150 | !! ** Purpose : save field which are necessary for sediment restart |
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151 | !! |
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152 | !! History : |
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153 | !! ! 06-07 (C. Ethe) original |
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154 | !!---------------------------------------------------------------------- |
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155 | !!* Modules used |
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156 | USE ioipsl |
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157 | !! *Arguments |
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158 | INTEGER, INTENT(in) :: kt ! number of iteration |
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159 | !! * local declarations |
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160 | INTEGER :: ji, jk |
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161 | INTEGER :: ic, jc, jn, itime |
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162 | REAL(wp) :: zdate0 |
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163 | REAL(wp), DIMENSION(1) :: zinfo |
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164 | CHARACTER(len=50) :: clname,cln |
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165 | CHARACTER(len=20) :: cltra |
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166 | REAL(wp), DIMENSION(:,:) , ALLOCATABLE :: zdta |
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167 | !! ----------------------------------------------------------------------- |
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168 | |
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169 | ALLOCATE( zdta(jpoce,jpksed) ) |
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170 | |
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171 | IF( MOD(kt,nstock) == 0 .OR. kt == nitsedend ) THEN |
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172 | |
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173 | !! 0. initialisations |
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174 | !! ------------------ |
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175 | |
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176 | IF(lwp) WRITE(numsed,*) ' ' |
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177 | IF(lwp) WRITE(numsed,*) 'sed_rst_write : write the sediment restart file in NetCDF format ', & |
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178 | 'at it= ',kt |
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179 | IF(lwp) WRITE(numsed,*) '~~~~~~~~~' |
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180 | |
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181 | !! 1. WRITE in nutwrs |
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182 | !! ------------------ |
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183 | |
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184 | ic = 1 |
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185 | DO jc = 1,16 |
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186 | IF( cexper(jc:jc) /= ' ') ic = jc |
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187 | END DO |
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188 | WRITE( cln,'("_",i5.5,i2.2,i2.2,"_restart.sed")') nyear, nmonth, nday |
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189 | clname = cexper(1:ic)//cln |
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190 | itime = 0 |
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191 | CALL ymds2ju( nyear, nmonth, nday, rdt, zdate0 ) |
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192 | zdate0 = zdate0 - adatrj ! set calendar origin to the beginning of the experiment |
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193 | CALL restini( 'NONE', jpi, jpj, glamt, gphit, jpksed, dz, & |
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194 | & clname, itime, zdate0, dtsed*nstock, numrsw, domain_id=nidom ) |
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195 | zinfo(1) = REAL( kt) |
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196 | CALL restput( numrsw, 'kt', 1,1, 1,0, zinfo ) |
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197 | |
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198 | |
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199 | |
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200 | ! Back to 2D geometry |
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201 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,1) , iarroce(1:jpoce), & |
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202 | & solcp(1:jpoce,1:jpksed,jsopal ) ) |
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203 | |
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204 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,2) , iarroce(1:jpoce), & |
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205 | & solcp(1:jpoce,1:jpksed,jsclay ) ) |
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206 | |
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207 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,3) , iarroce(1:jpoce), & |
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208 | & solcp(1:jpoce,1:jpksed,jspoc ) ) |
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209 | |
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210 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,4) , iarroce(1:jpoce), & |
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211 | & solcp(1:jpoce,1:jpksed,jscal ) ) |
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212 | |
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213 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,5) , iarroce(1:jpoce), & |
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214 | & pwcp(1:jpoce,1:jpksed,jwsil ) ) |
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215 | |
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216 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,6) , iarroce(1:jpoce), & |
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217 | & pwcp(1:jpoce,1:jpksed,jwoxy ) ) |
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218 | |
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219 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,7) , iarroce(1:jpoce), & |
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220 | & pwcp(1:jpoce,1:jpksed,jwdic ) ) |
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221 | |
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222 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,8) , iarroce(1:jpoce), & |
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223 | & pwcp(1:jpoce,1:jpksed,jwno3 ) ) |
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224 | |
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225 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,9) , iarroce(1:jpoce), & |
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226 | & pwcp(1:jpoce,1:jpksed,jwpo4 ) ) |
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227 | |
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228 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,10) , iarroce(1:jpoce), & |
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229 | & pwcp(1:jpoce,1:jpksed,jwalk ) ) |
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230 | |
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231 | CALL unpack_arr( jpoce, trcsedi(1:jpi,1:jpj,1:jpksed,11) , iarroce(1:jpoce), & |
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232 | & pwcp(1:jpoce,1:jpksed,jwc13 ) ) |
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233 | |
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234 | ! porosity |
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235 | zdta(:,:) = 0. |
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236 | DO jk = 1, jpksed |
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237 | DO ji = 1, jpoce |
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238 | zdta(ji,jk) = -LOG10( hipor(ji,jk) / densSW(ji) ) |
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239 | ENDDO |
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240 | ENDDO |
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241 | CALL unpack_arr( jpoce, flxsedi3d(1:jpi,1:jpj,1:jpksed,1) , iarroce(1:jpoce), & |
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242 | & zdta(1:jpoce,1:jpksed) ) |
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243 | |
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244 | CALL unpack_arr( jpoce, flxsedi3d(1:jpi,1:jpj,1:jpksed,2) , iarroce(1:jpoce), & |
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245 | & co3por(1:jpoce,1:jpksed) ) |
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246 | |
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247 | ! prognostic variables |
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248 | ! -------------------- |
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249 | |
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250 | |
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251 | DO jn = 1, jptrased |
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252 | cltra = sedtrcd(jn) |
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253 | CALL restput( numrsw, cltra, jpi, jpj, jpksed, 0, trcsedi(:,:,:,jn) ) |
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254 | ENDDO |
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255 | |
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256 | DO jn = 1, 2 |
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257 | cltra = seddia3d(jn) |
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258 | CALL restput( numrsw, cltra, jpi, jpj, jpksed, 0, flxsedi3d(:,:,:,jn) ) |
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259 | ENDDO |
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260 | |
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261 | |
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262 | CALL restclo( numrsw ) |
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263 | |
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264 | ENDIF |
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265 | |
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266 | DEALLOCATE( zdta ) |
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267 | |
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268 | END SUBROUTINE sed_rst_wri |
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269 | #else |
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270 | !!====================================================================== |
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271 | !! MODULE sedrst : Dummy module |
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272 | !!====================================================================== |
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273 | !! $Id$ |
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274 | CONTAINS |
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275 | SUBROUTINE sed_rst_read ! Empty routines |
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276 | END SUBROUTINE sed_rst_read |
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277 | SUBROUTINE sed_rst_wri( kt ) |
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278 | INTEGER, INTENT ( in ) :: kt |
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279 | WRITE(*,*) 'sed_rst_wri: You should not have seen this print! error?', kt |
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280 | END SUBROUTINE sed_rst_wri |
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281 | #endif |
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282 | |
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283 | END MODULE sedrst |
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