Ignore:
Timestamp:
02/22/21 16:13:31 (3 years ago)
Author:
yushan
Message:

XIOS_COUPLING : update unit test files

File:
1 edited

Legend:

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  • XIOS/dev/dev_ym/XIOS_COUPLING/xios_test_suite/TEST_SUITE/test_axis_algo/context_atm.xml

    r1921 r2036  
    33   
    44  <calendar type="Gregorian" time_origin="1850-01-01 00:00:00" />  
    5    
    6   <domain_definition> 
    7     <domain id="domain" /> 
    8     <domain id="other_domain" /> 
    9   </domain> 
    10    
     5  
     6  <scalar_definition> 
     7    <scalar id="scalar" />  
     8    <scalar id="other_scalar" />  
     9  </scalar_definition> 
     10  
     11  
    1112  <axis_definition> 
    1213    <axis id="axis" /> 
     14    <axis id="axis_str" n_glo="10" label="(0,9) [toto titi tata turlututu tito tati tuto tato tete tetu ] "/> 
    1315    <axis id="domain_X" /> 
    1416    <axis id="domain_Y" /> 
    1517    <axis id="ensemble" /> 
    16     <axis id="axis_interpolate" n_glo="2" value="(0,1)[80000 40000]"> 
    17       <interpolate_axis type="polynomial" order="1" coordinate="pressure"/>  
    18     </axis> 
    19     <axis id="axis_temporal_splitting" n_glo="4"> 
    20       <temporal_splitting />  
    21     </axis> 
    22      
    23     <axis id="axis_duplicate_scalar" n_glo="5"> 
    24       <duplicate_scalar />  
    25     </axis> 
    26  
    27  
    28  
    2918 
    3019    <axis id="other_axis" /> 
     
    3221    <axis id="other_domain_Y" /> 
    3322    <axis id="other_ensemble" /> 
     23 
     24    <axis id="axis_zoom" axis_ref="axis"> 
     25        <zoom_axis begin="0" n="5"/> 
     26    </axis> 
    3427  </axis_definition> 
    3528 
    36   <scalar_definition> 
    37     <scalar id="scalar" />  
    38   </scalar_definition> 
     29  
     30  <domain_definition> 
     31    <domain id="domain" /> 
     32    <domain id="other_domain" /> 
     33  </domain_definition> 
    3934   
    4035   
     
    4641      <axis axis_ref="axis" /> 
    4742    </grid> 
    48       
    49     <grid id="grid3D_interpolate_axis"> 
    50       <domain domain_ref="domain" /> 
    51       <axis axis_ref="axis_interpolate" /> 
    52     </grid> 
    53  
    54  
     43     
    5544    <grid id="grid2D"> 
    56       <domain domain_ref="domain" /> 
    57     </grid> 
    58  
    59     <grid id="grid2D_extract_domain"> 
    60       <axis n_glo="36" > 
    61       <extract_domain direction="iDir" position="5" /> 
    62       </axis> 
    63     </grid> 
    64  
    65  
     45      <domain domain_ref="domain" id="grid2D_dom" /> 
     46    </grid> 
    6647 
    6748    <grid id="grid1D"> 
    6849      <axis axis_ref="axis" /> 
    6950    </grid> 
    70    
    71     <grid id="grid1D_extract"> 
    72       <axis id="axis_extract" axis_ref="axis"> 
    73       <extract_axis n="5" begin="0" /> 
    74       </axis> 
    75     </grid>    
    76  
    77     <grid id="grid1D_zoom"> 
    78       <axis id="axis_zoom" axis_ref="axis"> 
    79       <zoom_axis n="5" begin="0" /> 
    80       </axis> 
    81     </grid>    
    82  
    83  
    84     <grid id="grid1D_inverse"> 
    85       <axis id="axis_inverse" axis_ref="axis"> 
    86       <inverse_axis /> 
    87       </axis> 
    88     </grid>    
    89  
    90     <grid id="grid1D_reduce_sum"> 
    91       <axis id="axis_reduce_sum" axis_ref="axis"> 
    92       <reduce_axis operation="sum"/> 
    93       </axis> 
    94     </grid>    
    95  
    96     <grid id="grid1D_reduce_max"> 
    97       <axis id="axis_reduce_max" axis_ref="axis"> 
    98       <reduce_axis operation="max"/> 
    99       </axis> 
    100     </grid>    
    101  
    102  
    103     <grid id="grid1D_reduce_min"> 
    104       <axis id="axis_reduce_min" axis_ref="axis"> 
    105       <reduce_axis operation="min"/> 
    106       </axis> 
    107     </grid>    
    108    
    109     <grid id="grid1D_reduce_ave"> 
    110       <axis id="axis_reduce_ave" axis_ref="axis"> 
    111       <reduce_axis operation="average"/> 
    112       </axis> 
    113     </grid>    
    114  
    115     <grid id="grid_src"> 
    116       <domain domain_ref="domain" /> 
    117       <axis axis_ref="axis" /> 
    118       <scalar scalar_ref="scalar"/> 
    119     </grid> 
    120    
    121      <grid id="grid_dst"> 
    122       <domain domain_ref="domain" /> 
    123       <axis axis_ref="axis" /> 
    124       <axis axis_ref="axis_temporal_splitting"/> 
    125     </grid> 
    126    
    127    <grid id="grid0D"> 
     51 
     52    <grid id="grid0D"> 
    12853      <scalar scalar_ref="scalar" /> 
    12954    </grid> 
    130     
    131     <grid id="grid1D_duplicate_scalar"> 
    132       <axis axis_ref="axis_duplicate_scalar" /> 
    133     </grid> 
    134   
    135  
    136  
    13755 
    13856    <grid id="grid_X"> 
     
    14866      <axis axis_ref="domain_Y" /> 
    14967    </grid> 
    150      
    151     <grid id="gridXY_zoomX"> 
    152       <axis id="domain_X_zoom" axis_ref="domain_X"> 
    153       <zoom_axis n="6" begin="1" /> 
    154       </axis> 
    155       <axis axis_ref="domain_Y" /> 
    156     </grid> 
    157     
    158     <grid id="gridXY_zoomY"> 
    159       <axis axis_ref="domain_X" /> 
    160       <axis id="domain_Y_zoom" axis_ref="domain_Y"> 
    161       <zoom_axis n="4" begin="2" /> 
    162       </axis> 
    163     </grid> 
    164  
    165  
    16668 
    16769    <grid id="grid_XYZ"> 
     
    198100    </grid> 
    199101 
     102    <grid id="grid0D_W"> 
     103      <scalar scalar_ref="scalar" /> 
     104      <axis axis_ref="ensemble" /> 
     105    </grid> 
     106 
    200107    <grid id="grid_XW"> 
    201108      <axis axis_ref="domain_X" /> 
     
    233140    </grid> 
    234141 
    235   
    236142  
    237143    <grid id="other_grid3D"> 
     
    241147     
    242148    <grid id="other_grid2D"> 
    243       <domain domain_ref="other_domain" /> 
     149      <domain domain_ref="other_domain" id="test_dom" /> 
    244150    </grid> 
    245151 
    246152    <grid id="other_grid1D"> 
    247153      <axis axis_ref="other_axis" /> 
     154    </grid> 
     155 
     156    <grid id="other_grid0D"> 
     157      <scalar scalar_ref="other_scalar" /> 
    248158    </grid> 
    249159 
     
    294204    </grid> 
    295205 
     206    <grid id="other_grid0D_W"> 
     207      <scalar scalar_ref="other_scalar" /> 
     208      <axis axis_ref="other_ensemble" /> 
     209    </grid> 
     210 
    296211    <grid id="other_grid_XW"> 
    297212      <axis axis_ref="other_domain_X" /> 
     
    329244    </grid> 
    330245 
    331     
     246 
    332247  </grid_definition> 
    333248   
    334249   
    335250  <field_definition level="1" prec="8" operation="instant" freq_op="1ts" enabled=".true." default_value="1.e+20" detect_missing_value="true"> 
     251    <field id="field0D" grid_ref="grid0D"/> 
    336252    <field id="field2D" grid_ref="grid2D" /> 
    337253    <field id="field3D" grid_ref="grid3D"  /> 
    338254    <field id="pressure" grid_ref="grid3D"  /> 
    339     <field id="field3D_recv" read_access="true" grid_ref="grid3D"  field_ref="field3D" /> 
    340     <field id="field3D_resend" grid_ref="grid3D" /> 
    341  
     255 
     256   <!-- <field id="field3D_recv" read_access="true" grid_ref="grid3D"  field_ref="field3D"/> 
     257    <field id="field3D_resend" grid_ref="grid3D" /> --> 
    342258    <field id="field_X" grid_ref="grid_X" /> 
    343259    <field id="field_Y" grid_ref="grid_Y" /> 
     
    348264    <field id="field_YZ" grid_ref="grid_YZ" /> 
    349265 
    350  
     266    <field id="field_zoom_vert" field_ref="field3D" grid_ref="grid_zoom_vert"  /> 
     267    <field id="field_zoom_vert_sum" field_ref="field_zoom_vert" grid_ref="grid_zoom_vert_sum"  /> 
     268 
     269 
     270    <field id="field0D_W" grid_ref="grid0D_W"/> 
    351271    <field id="field2D_W" grid_ref="grid2D_W"/> 
    352272    <field id="field3D_W" grid_ref="grid3D_W"  /> 
    353273    <field id="pressure_W" grid_ref="grid3D_W"  /> 
     274<!-- ym disable for now 
    354275    <field id="field3D_recv_W" read_access="true" grid_ref="grid3D_W"  field_ref="field3D_W"/> 
    355276    <field id="field3D_resend_W" grid_ref="grid3D_W" /> 
    356  
     277--> 
    357278    <field id="field_XW" grid_ref="grid_XW" /> 
    358279    <field id="field_YW" grid_ref="grid_YW" /> 
     
    364285 
    365286 
    366     <field id="other_field2D" grid_ref="other_grid2D"/> 
     287 
     288    <field id="other_field0D" grid_ref="other_grid0D"/> 
     289<!--    <field id="other_field2D" grid_ref="other_grid2D"/> --> 
     290    <field id="other_field2D" grid_ref="zoom1"/> 
    367291    <field id="other_field3D" grid_ref="other_grid3D"  /> 
    368292    <field id="other_pressure" grid_ref="other_grid3D"  /> 
     293<!-- ym disable for now 
    369294    <field id="other_field3D_recv" read_access="true" grid_ref="other_grid3D"  field_ref="other_field3D"/> 
    370295    <field id="other_field3D_resend" grid_ref="other_grid3D" /> 
    371  
     296--> 
    372297    <field id="other_field_X" grid_ref="other_grid_X" /> 
    373298    <field id="other_field_Y" grid_ref="other_grid_Y" /> 
     
    378303    <field id="other_field_YZ" grid_ref="other_grid_YZ" /> 
    379304 
     305    <field id="other_field0D_W" grid_ref="other_grid0D_W"/> 
    380306    <field id="other_field2D_W" grid_ref="other_grid2D_W"/> 
    381307    <field id="other_field3D_W" grid_ref="other_grid3D_W"  /> 
    382308    <field id="other_pressure_W" grid_ref="other_grid3D_W"  /> 
     309<!-- ym disable for now 
    383310    <field id="other_field3D_recv_W" read_access="true" grid_ref="other_grid3D_W"  field_ref="other_field3D_W"/> 
    384311    <field id="other_field3D_resend_W" grid_ref="other_grid3D_W" /> 
    385  
     312--> 
    386313    <field id="other_field_XW" grid_ref="other_grid_XW" /> 
    387314    <field id="other_field_YW" grid_ref="other_grid_YW" /> 
     
    391318    <field id="other_field_XZW" grid_ref="other_grid_XZW" /> 
    392319    <field id="other_field_YZW" grid_ref="other_grid_YZW" /> 
    393  
    394     <field id="field_src" grid_ref="grid_src" > field3D </field> 
    395      
    396320     
    397321  </field_definition> 
    398  
    399  
    400  
    401 <!-- implementation of specifics test case --> 
    402 <!-- simplest test cases : output data to file --> 
    403  
    404    
    405  
    406   <file_definition  type="one_file" > 
    407     <file id="atm_output_axis_transformation_reduce" output_freq="4ts" type="one_file" enabled="true"> 
    408        <field field_ref="field_Z" /> 
    409        <field id="field_Z_reduce_sum" field_ref="field_Z" grid_ref="grid1D_reduce_sum" /> 
    410        <field id="field_Z_reduce_max" field_ref="field_Z" grid_ref="grid1D_reduce_max" /> 
    411        <field id="field_Z_reduce_min" field_ref="field_Z" grid_ref="grid1D_reduce_min" /> 
    412        <field id="field_Z_reduce_ave" field_ref="field_Z" grid_ref="grid1D_reduce_ave" /> 
    413     </file> 
    414  
    415     <file id="atm_output_axis_transformation_zoom" output_freq="12ts" type="one_file" enabled="true"> 
    416        <field field_ref="field_Z" /> 
    417        <field id="field_Z_zoom"       field_ref="field_Z" grid_ref="grid1D_zoom"       /> 
    418        <field field_ref="field_XY" /> 
    419        <field id="field_XY_zoomX"       field_ref="field_XY" grid_ref="gridXY_zoomX"       /> 
    420        <field id="field_XY_zoomY"       field_ref="field_XY" grid_ref="gridXY_zoomY"       /> 
    421     </file> 
    422      
    423     <file id="atm_output_axis_transformation_extract" output_freq="12ts" type="one_file" enabled="true"> 
    424        <field field_ref="field_Z" /> 
    425        <field id="field_Z_extract"    field_ref="field_Z" grid_ref="grid1D_extract"    />  
    426     </file> 
    427      
    428   
    429     <file id="atm_output_axis_transformation_inverse" output_freq="12ts" type="one_file" enabled="true"> 
    430        <field field_ref="field_Z" /> 
    431        <field id="field_Z_inverse"    field_ref="field_Z" grid_ref="grid1D_inverse"    /> 
    432     </file> 
    433      
    434     <file id="atm_output_axis_transformation_extract_domain" output_freq="12ts" type="one_file" enabled="true"> 
    435        <field field_ref="field2D" /> 
    436        <field id="field2D_extract"       field_ref="field2D" grid_ref="grid2D_extract_domain"       /> 
    437     </file> 
    438      
    439     <file id="atm_output_axis_transformation_interpolate" output_freq="24ts" type="one_file" enabled="true"> 
    440        <field field_ref="field3D"  /> 
    441        <field field_ref="pressure"  /> 
    442        <field id="field_interpolate_axis" field_ref="field3D" grid_ref="grid3D_interpolate_axis" /> 
    443     </file> 
    444  
    445     <file id="atm_output_axis_transformation_temporal_splitting" output_freq="4ts" type="one_file" enabled="true"> 
    446        <field field_ref="field_src" operation="instant" /> 
    447        <field id="field_temporal_splitting" field_ref="field_src" grid_ref="grid_dst" /> 
    448     </file> 
    449      
    450     <file id="atm_output_axis_transformation_duplicate_scalar" output_freq="4ts" type="one_file" enabled="true"> 
    451        <field field_ref="field_Z" /> 
    452        <field id="field_0D" field_ref="field_Z" name="field_0D" grid_ref="grid0D" /> 
    453        <field id="field_duplicate_scalar" field_ref="field_0D" name="field_duplicate_scalar" grid_ref="grid1D_duplicate_scalar" /> 
    454     </file> 
    455  
    456  
    457  
    458  
    459  
    460     <file id="atm_output" output_freq="1ts" type="one_file" enabled="false"> 
    461        <field field_ref="field3D" /> 
    462        <field field_ref="field2D" />  
    463        <field field_ref="field_X" /> 
    464        <field field_ref="field_Y" /> 
    465        <field field_ref="field_XY" /> 
    466        <field field_ref="field_Z" /> 
    467        <field field_ref="field_XYZ" /> 
    468        <field field_ref="field_XZ" /> 
    469        <field field_ref="field_YZ" /> 
    470        <field field_ref="pressure"  />  
    471        <field field_ref="field3D_resend" /> 
    472     </file> 
    473  
    474     <file id="atm_output_other" output_freq="1ts" type="one_file" enabled="false"> 
    475        <field field_ref="other_field3D" /> 
    476        <field field_ref="other_field2D" />  
    477        <field field_ref="other_field_X" /> 
    478        <field field_ref="other_field_Y" /> 
    479        <field field_ref="other_field_XY" /> 
    480        <field field_ref="other_field_Z" /> 
    481        <field field_ref="other_field_XYZ" /> 
    482        <field field_ref="other_field_XZ" /> 
    483        <field field_ref="other_field_YZ" /> 
    484        <field field_ref="other_pressure"  />  
    485        <field field_ref="other_field3D_resend" /> 
    486     </file> 
    487  
    488     <file id="atm_output_W" output_freq="1ts" enabled="false"> 
    489        <field field_ref="field3D_W" /> 
    490        <field field_ref="field2D_W" />  
    491        <field field_ref="field_XW" /> 
    492        <field field_ref="field_YW" /> 
    493        <field field_ref="field_XYW" /> 
    494        <field field_ref="field_ZW" /> 
    495        <field field_ref="field_XYZW" /> 
    496        <field field_ref="field_XZW" /> 
    497        <field field_ref="field_YZW" /> 
    498     </file> 
    499      
    500      
     322   
     323 
     324<!-- test transform  --> 
     325 
     326 
     327  <axis_definition> 
     328    <axis id="axis_inverse" axis_ref="axis"> 
     329      <inverse_axis /> 
     330    </axis> 
     331 
     332    <axis id="axis_extract" > 
     333      <extract_axis begin="1" n="5" /> 
     334    </axis> 
     335 
     336 
     337 
     338  </axis_definition> 
     339 
     340  <domain_definition> 
     341 
     342    <domain id="domain_extract"> 
     343      <extract_domain ibegin="0" ni="36" jbegin="2" nj="3" /> 
     344    </domain> 
     345  
     346  
     347    <domain id="domain_reorder" domain_ref="domain"> 
     348      <reorder_domain invert_lat="true" shift_lon_fraction="0.5"/> 
     349    </domain> 
     350   
     351    <domain id="domain_expand" > 
     352      <expand_domain order="1" type="edge"/> 
     353    </domain> 
     354   
     355    <domain id="domain_interpolate" domain_ref="other_domain" > 
     356      <interpolate_domain detect_missing_value="false"/> 
     357    </domain> 
     358   
     359    <domain id="domain_connect" > 
     360      <compute_connectivity_domain type="edge"/> 
     361    </domain> 
     362 
     363    <domain id="domain_recti" ni_glo="40" nj_glo="20" type="rectilinear" /> 
     364 
     365   
     366    <domain id="domain_expand_extract" > 
     367      <expand_domain order="1" type="edge"/> 
     368      <extract_domain ibegin="0" ni="38" jbegin="2" nj="3" /> 
     369    </domain> 
     370   
     371 
     372 
     373  </domain_definition> 
     374   
     375  <grid_definition> 
     376  
     377    <grid id="grid1D_inverse"> 
     378      <axis axis_ref="axis_inverse" /> 
     379    </grid> 
     380   
     381    <grid id="grid1D_extract"> 
     382      <axis axis_ref="axis_extract" /> 
     383    </grid> 
     384   
     385 
     386    <grid id="grid2D_extract"> 
     387      <domain domain_ref="domain_extract" /> 
     388    </grid> 
     389   
     390    <grid id="grid2D_zoom"> 
     391      <domain domain_ref="domain_zoom" /> 
     392    </grid> 
     393  
     394 
     395    <grid id="grid2D_reorder"> 
     396      <domain domain_ref="domain_reorder" /> 
     397    </grid> 
     398  
     399    <grid id="grid2D_expand"> 
     400      <domain domain_ref="domain_expand" /> 
     401    </grid> 
     402 
     403    <grid id="grid2D_interpolate"> 
     404      <domain domain_ref="domain_interpolate" /> 
     405    </grid> 
     406   
     407 
     408    <grid id="grid2D_connect"> 
     409      <domain domain_ref="domain_connect" /> 
     410    </grid> 
     411 
     412 
     413    <grid id="grid2D_recti"> 
     414      <domain domain_ref="domain_recti" > 
     415        <generate_rectilinear_domain lat_start="-85" lon_start="-175" /> 
     416        <interpolate_domain detect_missing_value="false"/> 
     417      </domain> 
     418    </grid> 
     419  
     420    <grid id="grid2D_expand_extract"> 
     421      <domain domain_ref="domain_expand_extract" /> 
     422    </grid> 
     423   
     424    <grid id="grid2D_extract_domain">   
     425      <axis  n_glo="36"> 
     426        <extract_domain position="2" direction="jDir" /> 
     427      </axis> 
     428    </grid> 
     429 
     430    <grid id="grid3D_axis_interpolate"> 
     431      <domain domain_ref="domain"/> 
     432      <axis n_glo="2" value="(0,1)[40000 20000]"> 
     433        <interpolate_axis coordinate="pressure" /> 
     434      </axis> 
     435    </grid>  
     436  
     437    <grid id="grid3D_axis_interpolate_bis"> 
     438      <domain domain_ref="domain"/> 
     439      <axis n_glo="2" value="(0,1)[40000 20000]"> 
     440        <interpolate_axis /> 
     441      </axis> 
     442    </grid>  
     443 
     444 
     445  </grid_definition> 
     446  
     447  
     448  <field_definition> 
     449    <field_group id="fields_with_domain_transformation" operation="instant" > 
     450      <field id="field2D_extract"  field_ref="field2D" grid_ref="grid2D_extract"/> 
     451      <field id="field2D_reorder"  field_ref="field2D" grid_ref="grid2D_reorder" /> 
     452      <field id="field2D_expand"   field_ref="field2D" grid_ref="grid2D_expand"/> 
     453      <field id="field2D_connect"  field_ref="field2D" grid_ref="grid2D_connect"/> 
     454      <field id="field2D_interpo"  field_ref="field2D" grid_ref="grid2D_interpolate"/> 
     455      <field id="field2D_recti"    field_ref="field2D" grid_ref="grid2D_recti"/> 
     456      <field id="field2D_exp_ext"  field_ref="field2D" grid_ref="grid2D_expand_extract"/> 
     457      <field id="field2D_reorder_ext"  field_ref="field2D_reorder" grid_ref="grid2D_extract"/> 
     458    </field_group> 
     459 
     460    <field_group id="fields_with_axis_transformation" operation="instant"  > 
     461      <field id="fieldZ_inverse"   field_ref="field_Z" grid_ref="grid1D_inverse"/> 
     462      <field id="fieldZ_extract"   field_ref="field_Z" grid_ref="grid1D_extract"/> 
     463      <field id="field2D_extract_domain"   field_ref="field2D" grid_ref="grid2D_extract_domain"/> 
     464      <field id="field3D_interpo"  field_ref="field3D" grid_ref="grid3D_axis_interpolate"/> 
     465      <field id="field3D_interpo_bis"  field_ref="field3D" grid_ref="grid3D_axis_interpolate_bis"/> 
     466    </field_group> 
     467 
     468  </field_definition> 
     469 
     470 
     471 
     472  <file_definition> 
     473     
     474  <file id="atm_output_domain" output_freq="1ts" type="one_file" enabled="false"> 
     475      <field field_ref="field2D_extract" /> 
     476      <field field_ref="field2D_reorder" /> 
     477      <field field_ref="field2D_expand" /> 
     478      <field field_ref="field2D_interpo" /> 
     479      <field field_ref="field2D_recti" /> 
     480      <field field_ref="field2D_exp_ext" /> 
     481      <field field_ref="field2D_reorder_ext" /> 
     482      <field id="field2D"  /> 
     483  </file> 
     484      
     485  <file id="atm_output_axis" output_freq="4ts" type="one_file" enabled="false"> 
     486      <field field_ref="fieldZ_inverse" enabled="false"  /> 
     487      <field field_ref="fieldZ_extract"  enabled="true"/> 
     488      <field field_ref="field2D_extract_domain"  enabled="false"/> 
     489      <field id="field_Z"  enabled="true"/> 
     490      <field id="field2D"  enabled="true"/> 
     491  </file> 
     492      
     493  <file id="atm_output_interpolate" output_freq="1ts" type="one_file" enabled="true"> 
     494      <field field_ref="field3D_interpo" /> 
     495      <field field_ref="field3D_interpo_bis" /> 
     496      <field id="field3D"  /> 
     497  </file> 
     498     
     499 
     500 
    501501  </file_definition> 
    502    
     502 
     503 
     504 
    503505   
    504506</context> 
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