[219] | 1 | #include "context.hpp" |
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[352] | 2 | #include "attribute_template.hpp" |
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| 3 | #include "object_template.hpp" |
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| 4 | #include "group_template.hpp" |
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[219] | 5 | |
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| 6 | #include "calendar_type.hpp" |
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[278] | 7 | #include "duration.hpp" |
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[219] | 8 | |
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[300] | 9 | #include "context_client.hpp" |
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| 10 | #include "context_server.hpp" |
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| 11 | #include "nc4_data_output.hpp" |
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[346] | 12 | #include "node_type.hpp" |
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[352] | 13 | #include "message.hpp" |
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| 14 | #include "type.hpp" |
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[591] | 15 | #include "xios_spl.hpp" |
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[1158] | 16 | #include "timer.hpp" |
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| 17 | #include "memtrack.hpp" |
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[1215] | 18 | #include <limits> |
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[1349] | 19 | #include <fstream> |
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[992] | 20 | #include "server.hpp" |
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[1349] | 21 | #include "distribute_file_server2.hpp" |
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[697] | 22 | |
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[335] | 23 | namespace xios { |
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[509] | 24 | |
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[549] | 25 | shared_ptr<CContextGroup> CContext::root; |
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[509] | 26 | |
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[219] | 27 | /// ////////////////////// Définitions ////////////////////// /// |
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| 28 | |
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| 29 | CContext::CContext(void) |
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| 30 | : CObjectTemplate<CContext>(), CContextAttributes() |
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[983] | 31 | , calendar(), hasClient(false), hasServer(false) |
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[1139] | 32 | , isPostProcessed(false), finalized(false) |
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[1009] | 33 | , idServer_(), client(0), server(0) |
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[1130] | 34 | , allProcessed(false), countChildCtx_(0) |
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[219] | 35 | { /* Ne rien faire de plus */ } |
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| 36 | |
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| 37 | CContext::CContext(const StdString & id) |
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| 38 | : CObjectTemplate<CContext>(id), CContextAttributes() |
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[983] | 39 | , calendar(), hasClient(false), hasServer(false) |
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[1139] | 40 | , isPostProcessed(false), finalized(false) |
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[1009] | 41 | , idServer_(), client(0), server(0) |
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[1130] | 42 | , allProcessed(false), countChildCtx_(0) |
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[219] | 43 | { /* Ne rien faire de plus */ } |
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| 44 | |
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| 45 | CContext::~CContext(void) |
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[509] | 46 | { |
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[597] | 47 | delete client; |
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| 48 | delete server; |
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[1071] | 49 | for (std::vector<CContextClient*>::iterator it = clientPrimServer.begin(); it != clientPrimServer.end(); it++) delete *it; |
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| 50 | for (std::vector<CContextServer*>::iterator it = serverPrimServer.begin(); it != serverPrimServer.end(); it++) delete *it; |
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[1139] | 51 | |
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[300] | 52 | } |
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[219] | 53 | |
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| 54 | //---------------------------------------------------------------- |
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[509] | 55 | //! Get name of context |
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[219] | 56 | StdString CContext::GetName(void) { return (StdString("context")); } |
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| 57 | StdString CContext::GetDefName(void){ return (CContext::GetName()); } |
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| 58 | ENodeType CContext::GetType(void) { return (eContext); } |
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| 59 | |
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| 60 | //---------------------------------------------------------------- |
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[640] | 61 | |
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[509] | 62 | /*! |
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| 63 | \brief Get context group (context root) |
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| 64 | \return Context root |
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| 65 | */ |
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[347] | 66 | CContextGroup* CContext::getRoot(void) |
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[509] | 67 | { |
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[549] | 68 | if (root.get()==NULL) root=shared_ptr<CContextGroup>(new CContextGroup(xml::CXMLNode::GetRootName())); |
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[509] | 69 | return root.get(); |
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[219] | 70 | } |
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| 71 | |
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[640] | 72 | //---------------------------------------------------------------- |
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[509] | 73 | |
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| 74 | /*! |
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| 75 | \brief Get calendar of a context |
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| 76 | \return Calendar |
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| 77 | */ |
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[343] | 78 | boost::shared_ptr<CCalendar> CContext::getCalendar(void) const |
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[219] | 79 | { |
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| 80 | return (this->calendar); |
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| 81 | } |
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[509] | 82 | |
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[219] | 83 | //---------------------------------------------------------------- |
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[640] | 84 | |
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[509] | 85 | /*! |
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| 86 | \brief Set a context with a calendar |
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| 87 | \param[in] newCalendar new calendar |
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| 88 | */ |
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[343] | 89 | void CContext::setCalendar(boost::shared_ptr<CCalendar> newCalendar) |
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[219] | 90 | { |
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| 91 | this->calendar = newCalendar; |
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| 92 | } |
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[509] | 93 | |
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[219] | 94 | //---------------------------------------------------------------- |
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[509] | 95 | /*! |
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| 96 | \brief Parse xml file and write information into context object |
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| 97 | \param [in] node xmld node corresponding in xml file |
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| 98 | */ |
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[219] | 99 | void CContext::parse(xml::CXMLNode & node) |
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| 100 | { |
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| 101 | CContext::SuperClass::parse(node); |
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| 102 | |
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| 103 | // PARSING POUR GESTION DES ENFANTS |
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[278] | 104 | xml::THashAttributes attributes = node.getAttributes(); |
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[219] | 105 | |
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[278] | 106 | if (attributes.end() != attributes.find("src")) |
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| 107 | { |
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| 108 | StdIFStream ifs ( attributes["src"].c_str() , StdIFStream::in ); |
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[462] | 109 | if ( (ifs.rdstate() & std::ifstream::failbit ) != 0 ) |
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| 110 | ERROR("void CContext::parse(xml::CXMLNode & node)", |
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| 111 | <<endl<< "Can not open <"<<attributes["src"].c_str()<<"> file" ); |
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[278] | 112 | if (!ifs.good()) |
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| 113 | ERROR("CContext::parse(xml::CXMLNode & node)", |
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| 114 | << "[ filename = " << attributes["src"] << " ] Bad xml stream !"); |
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[462] | 115 | xml::CXMLParser::ParseInclude(ifs, attributes["src"], *this); |
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[278] | 116 | } |
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| 117 | |
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[219] | 118 | if (node.getElementName().compare(CContext::GetName())) |
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[421] | 119 | DEBUG("Le noeud is wrong defined but will be considered as a context !"); |
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[219] | 120 | |
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| 121 | if (!(node.goToChildElement())) |
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| 122 | { |
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| 123 | DEBUG("Le context ne contient pas d'enfant !"); |
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| 124 | } |
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| 125 | else |
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| 126 | { |
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| 127 | do { // Parcours des contextes pour traitement. |
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| 128 | |
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| 129 | StdString name = node.getElementName(); |
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| 130 | attributes.clear(); |
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| 131 | attributes = node.getAttributes(); |
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| 132 | |
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| 133 | if (attributes.end() != attributes.find("id")) |
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[509] | 134 | { |
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| 135 | DEBUG(<< "Definition node has an id," |
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| 136 | << "it will not be taking account !"); |
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| 137 | } |
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[219] | 138 | |
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| 139 | #define DECLARE_NODE(Name_, name_) \ |
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| 140 | if (name.compare(C##Name_##Definition::GetDefName()) == 0) \ |
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[549] | 141 | { C##Name_##Definition::create(C##Name_##Definition::GetDefName()) -> parse(node); continue; } |
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[219] | 142 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 143 | #include "node_type.conf" |
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[286] | 144 | |
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[421] | 145 | DEBUG(<< "The element \'" << name |
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| 146 | << "\' in the context \'" << CContext::getCurrent()->getId() |
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| 147 | << "\' is not a definition !"); |
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[219] | 148 | |
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| 149 | } while (node.goToNextElement()); |
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| 150 | |
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| 151 | node.goToParentElement(); // Retour au parent |
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| 152 | } |
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| 153 | } |
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| 154 | |
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| 155 | //---------------------------------------------------------------- |
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[509] | 156 | //! Show tree structure of context |
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[219] | 157 | void CContext::ShowTree(StdOStream & out) |
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| 158 | { |
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[549] | 159 | StdString currentContextId = CContext::getCurrent() -> getId(); |
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[347] | 160 | std::vector<CContext*> def_vector = |
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[346] | 161 | CContext::getRoot()->getChildList(); |
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[347] | 162 | std::vector<CContext*>::iterator |
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[219] | 163 | it = def_vector.begin(), end = def_vector.end(); |
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| 164 | |
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| 165 | out << "<? xml version=\"1.0\" ?>" << std::endl; |
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| 166 | out << "<" << xml::CXMLNode::GetRootName() << " >" << std::endl; |
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[509] | 167 | |
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[219] | 168 | for (; it != end; it++) |
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| 169 | { |
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[509] | 170 | CContext* context = *it; |
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| 171 | CContext::setCurrent(context->getId()); |
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[219] | 172 | out << *context << std::endl; |
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| 173 | } |
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[509] | 174 | |
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[219] | 175 | out << "</" << xml::CXMLNode::GetRootName() << " >" << std::endl; |
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[509] | 176 | CContext::setCurrent(currentContextId); |
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[219] | 177 | } |
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[346] | 178 | |
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[509] | 179 | |
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[219] | 180 | //---------------------------------------------------------------- |
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| 181 | |
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[509] | 182 | //! Convert context object into string (to print) |
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[219] | 183 | StdString CContext::toString(void) const |
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| 184 | { |
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| 185 | StdOStringStream oss; |
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| 186 | oss << "<" << CContext::GetName() |
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| 187 | << " id=\"" << this->getId() << "\" " |
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| 188 | << SuperClassAttribute::toString() << ">" << std::endl; |
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| 189 | if (!this->hasChild()) |
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| 190 | { |
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| 191 | //oss << "<!-- No definition -->" << std::endl; // fait planter l'incrémentation |
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| 192 | } |
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| 193 | else |
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| 194 | { |
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| 195 | |
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| 196 | #define DECLARE_NODE(Name_, name_) \ |
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[346] | 197 | if (C##Name_##Definition::has(C##Name_##Definition::GetDefName())) \ |
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| 198 | oss << * C##Name_##Definition::get(C##Name_##Definition::GetDefName()) << std::endl; |
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[219] | 199 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 200 | #include "node_type.conf" |
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| 201 | |
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| 202 | } |
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| 203 | |
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| 204 | oss << "</" << CContext::GetName() << " >"; |
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| 205 | |
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| 206 | return (oss.str()); |
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| 207 | } |
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| 208 | |
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| 209 | //---------------------------------------------------------------- |
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| 210 | |
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[509] | 211 | /*! |
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| 212 | \brief Find all inheritace among objects in a context. |
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| 213 | \param [in] apply (true) write attributes of parent into ones of child if they are empty |
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| 214 | (false) write attributes of parent into a new container of child |
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| 215 | \param [in] parent unused |
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| 216 | */ |
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[445] | 217 | void CContext::solveDescInheritance(bool apply, const CAttributeMap * const UNUSED(parent)) |
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[219] | 218 | { |
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| 219 | #define DECLARE_NODE(Name_, name_) \ |
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[354] | 220 | if (C##Name_##Definition::has(C##Name_##Definition::GetDefName())) \ |
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[445] | 221 | C##Name_##Definition::get(C##Name_##Definition::GetDefName())->solveDescInheritance(apply); |
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[219] | 222 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 223 | #include "node_type.conf" |
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| 224 | } |
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| 225 | |
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| 226 | //---------------------------------------------------------------- |
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| 227 | |
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[509] | 228 | //! Verify if all root definition in the context have child. |
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[219] | 229 | bool CContext::hasChild(void) const |
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| 230 | { |
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| 231 | return ( |
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| 232 | #define DECLARE_NODE(Name_, name_) \ |
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[346] | 233 | C##Name_##Definition::has(C##Name_##Definition::GetDefName()) || |
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[219] | 234 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 235 | #include "node_type.conf" |
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| 236 | false); |
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| 237 | } |
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| 238 | |
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| 239 | //---------------------------------------------------------------- |
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| 240 | |
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| 241 | void CContext::CleanTree(void) |
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| 242 | { |
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[549] | 243 | #define DECLARE_NODE(Name_, name_) C##Name_##Definition::ClearAllAttributes(); |
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[219] | 244 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 245 | #include "node_type.conf" |
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| 246 | } |
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| 247 | ///--------------------------------------------------------------- |
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[509] | 248 | |
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| 249 | //! Initialize client side |
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[597] | 250 | void CContext::initClient(MPI_Comm intraComm, MPI_Comm interComm, CContext* cxtServer /*= 0*/) |
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[300] | 251 | { |
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[983] | 252 | |
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| 253 | hasClient = true; |
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[1071] | 254 | MPI_Comm intraCommServer, interCommServer; |
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[1316] | 255 | |
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[1054] | 256 | |
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[1021] | 257 | if (CServer::serverLevel != 1) |
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[1071] | 258 | // initClient is called by client |
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[983] | 259 | { |
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| 260 | client = new CContextClient(this, intraComm, interComm, cxtServer); |
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[1054] | 261 | if (cxtServer) // Attached mode |
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| 262 | { |
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| 263 | intraCommServer = intraComm; |
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| 264 | interCommServer = interComm; |
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| 265 | } |
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| 266 | else |
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| 267 | { |
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[1071] | 268 | MPI_Comm_dup(intraComm, &intraCommServer); |
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| 269 | comms.push_back(intraCommServer); |
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| 270 | MPI_Comm_dup(interComm, &interCommServer); |
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| 271 | comms.push_back(interCommServer); |
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[1054] | 272 | } |
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[1316] | 273 | /* for registry take the id of client context */ |
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| 274 | /* for servers, supress the _server_ from id */ |
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| 275 | string contextRegistryId=getId() ; |
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| 276 | size_t pos=contextRegistryId.find("_server_") ; |
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| 277 | if (pos!=std::string::npos) contextRegistryId=contextRegistryId.substr(0,pos) ; |
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| 278 | |
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[1071] | 279 | registryIn=new CRegistry(intraComm); |
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[1316] | 280 | registryIn->setPath(contextRegistryId) ; |
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[1071] | 281 | if (client->clientRank==0) registryIn->fromFile("xios_registry.bin") ; |
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| 282 | registryIn->bcastRegistry() ; |
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| 283 | registryOut=new CRegistry(intraComm) ; |
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[1316] | 284 | |
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| 285 | registryOut->setPath(contextRegistryId) ; |
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[1071] | 286 | |
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| 287 | server = new CContextServer(this, intraCommServer, interCommServer); |
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[983] | 288 | } |
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[1021] | 289 | else |
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[1054] | 290 | // initClient is called by primary server |
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[983] | 291 | { |
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[1009] | 292 | clientPrimServer.push_back(new CContextClient(this, intraComm, interComm)); |
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[1071] | 293 | MPI_Comm_dup(intraComm, &intraCommServer); |
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| 294 | comms.push_back(intraCommServer); |
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| 295 | MPI_Comm_dup(interComm, &interCommServer); |
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| 296 | comms.push_back(interCommServer); |
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| 297 | serverPrimServer.push_back(new CContextServer(this, intraCommServer, interCommServer)); |
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[983] | 298 | } |
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[509] | 299 | } |
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[219] | 300 | |
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[1330] | 301 | /*! |
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| 302 | Sets client buffers. |
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| 303 | \param [in] contextClient |
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| 304 | \param [in] bufferForWriting True if buffers are used for sending data for writing |
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| 305 | This flag is only true for client and server-1 for communication with server-2 |
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| 306 | */ |
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| 307 | void CContext::setClientServerBuffer(CContextClient* contextClient, bool bufferForWriting) |
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[509] | 308 | { |
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[1201] | 309 | // Estimated minimum event size for small events (10 is an arbitrary constant just for safety) |
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[1372] | 310 | const size_t minEventSize = CEventClient::headerSize + getIdServer().size() + 10 * sizeof(int); |
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[1201] | 311 | |
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| 312 | // Ensure there is at least some room for 20 of such events in the buffers |
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| 313 | size_t minBufferSize = std::max(CXios::minBufferSize, 20 * minEventSize); |
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| 314 | |
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[583] | 315 | #define DECLARE_NODE(Name_, name_) \ |
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[731] | 316 | if (minBufferSize < sizeof(C##Name_##Definition)) minBufferSize = sizeof(C##Name_##Definition); |
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[583] | 317 | #define DECLARE_NODE_PAR(Name_, name_) |
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| 318 | #include "node_type.conf" |
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[719] | 319 | #undef DECLARE_NODE |
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| 320 | #undef DECLARE_NODE_PAR |
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| 321 | |
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[1201] | 322 | // Compute the buffer sizes needed to send the attributes and data corresponding to fields |
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[917] | 323 | std::map<int, StdSize> maxEventSize; |
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[1330] | 324 | std::map<int, StdSize> bufferSize = getAttributesBufferSize(maxEventSize, contextClient, bufferForWriting); |
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| 325 | std::map<int, StdSize> dataBufferSize = getDataBufferSize(maxEventSize, contextClient, bufferForWriting); |
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[729] | 326 | |
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[909] | 327 | std::map<int, StdSize>::iterator it, ite = dataBufferSize.end(); |
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[731] | 328 | for (it = dataBufferSize.begin(); it != ite; ++it) |
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| 329 | if (it->second > bufferSize[it->first]) bufferSize[it->first] = it->second; |
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| 330 | |
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[1227] | 331 | // Apply the buffer size factor, check that we are above the minimum buffer size and below the maximum size |
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[909] | 332 | ite = bufferSize.end(); |
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| 333 | for (it = bufferSize.begin(); it != ite; ++it) |
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| 334 | { |
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| 335 | it->second *= CXios::bufferSizeFactor; |
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| 336 | if (it->second < minBufferSize) it->second = minBufferSize; |
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[1227] | 337 | if (it->second > CXios::maxBufferSize) it->second = CXios::maxBufferSize; |
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[909] | 338 | } |
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| 339 | |
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[1201] | 340 | // Leaders will have to send some control events so ensure there is some room for those in the buffers |
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[1184] | 341 | if (contextClient->isServerLeader()) |
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[598] | 342 | { |
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[1184] | 343 | const std::list<int>& ranks = contextClient->getRanksServerLeader(); |
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[729] | 344 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
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[1201] | 345 | { |
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| 346 | if (!bufferSize.count(*itRank)) |
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| 347 | { |
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| 348 | bufferSize[*itRank] = minBufferSize; |
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| 349 | maxEventSize[*itRank] = minEventSize; |
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| 350 | } |
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| 351 | } |
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[598] | 352 | } |
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[1184] | 353 | contextClient->setBufferSize(bufferSize, maxEventSize); |
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[584] | 354 | |
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[509] | 355 | } |
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| 356 | |
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| 357 | //! Verify whether a context is initialized |
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[461] | 358 | bool CContext::isInitialized(void) |
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| 359 | { |
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[549] | 360 | return hasClient; |
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[461] | 361 | } |
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[509] | 362 | |
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[983] | 363 | void CContext::initServer(MPI_Comm intraComm, MPI_Comm interComm, CContext* cxtClient /*= 0*/) |
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[300] | 364 | { |
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[549] | 365 | hasServer=true; |
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| 366 | server = new CContextServer(this,intraComm,interComm); |
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[697] | 367 | |
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[1316] | 368 | /* for registry take the id of client context */ |
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| 369 | /* for servers, supress the _server_ from id */ |
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| 370 | string contextRegistryId=getId() ; |
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| 371 | size_t pos=contextRegistryId.find("_server_") ; |
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| 372 | if (pos!=std::string::npos) contextRegistryId=contextRegistryId.substr(0,pos) ; |
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| 373 | |
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[1071] | 374 | registryIn=new CRegistry(intraComm); |
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[1316] | 375 | registryIn->setPath(contextRegistryId) ; |
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[1071] | 376 | if (server->intraCommRank==0) registryIn->fromFile("xios_registry.bin") ; |
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| 377 | registryIn->bcastRegistry() ; |
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| 378 | registryOut=new CRegistry(intraComm) ; |
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[1316] | 379 | registryOut->setPath(contextRegistryId) ; |
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[775] | 380 | |
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[597] | 381 | MPI_Comm intraCommClient, interCommClient; |
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| 382 | if (cxtClient) // Attached mode |
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| 383 | { |
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| 384 | intraCommClient = intraComm; |
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| 385 | interCommClient = interComm; |
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| 386 | } |
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| 387 | else |
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| 388 | { |
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[1071] | 389 | MPI_Comm_dup(intraComm, &intraCommClient); |
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| 390 | comms.push_back(intraCommClient); |
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| 391 | MPI_Comm_dup(interComm, &interCommClient); |
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| 392 | comms.push_back(interCommClient); |
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[597] | 393 | } |
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[1158] | 394 | client = new CContextClient(this,intraCommClient,interCommClient, cxtClient); |
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[509] | 395 | } |
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[300] | 396 | |
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[597] | 397 | //! Try to send the buffers and receive possible answers |
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[1378] | 398 | bool CContext::checkBuffersAndListen(bool enableEventsProcessing /*= true*/) |
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[1130] | 399 | { |
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| 400 | bool clientReady, serverFinished; |
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[1054] | 401 | |
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[1130] | 402 | // Only classical servers are non-blocking |
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| 403 | if (CServer::serverLevel == 0) |
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| 404 | { |
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| 405 | client->checkBuffers(); |
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| 406 | bool hasTmpBufferedEvent = client->hasTemporarilyBufferedEvent(); |
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| 407 | if (hasTmpBufferedEvent) |
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| 408 | hasTmpBufferedEvent = !client->sendTemporarilyBufferedEvent(); |
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| 409 | // Don't process events if there is a temporarily buffered event |
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[1378] | 410 | return server->eventLoop(!hasTmpBufferedEvent || !enableEventsProcessing); |
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[1130] | 411 | } |
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| 412 | else if (CServer::serverLevel == 1) |
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| 413 | { |
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[1139] | 414 | if (!finalized) |
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| 415 | client->checkBuffers(); |
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| 416 | bool serverFinished = true; |
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| 417 | if (!finalized) |
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[1380] | 418 | serverFinished = server->eventLoop(enableEventsProcessing); |
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[1130] | 419 | bool serverPrimFinished = true; |
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| 420 | for (int i = 0; i < clientPrimServer.size(); ++i) |
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| 421 | { |
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[1139] | 422 | if (!finalized) |
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| 423 | clientPrimServer[i]->checkBuffers(); |
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| 424 | if (!finalized) |
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[1378] | 425 | serverPrimFinished *= serverPrimServer[i]->eventLoop(enableEventsProcessing); |
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[1130] | 426 | } |
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| 427 | return ( serverFinished && serverPrimFinished); |
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| 428 | } |
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[1054] | 429 | |
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[1130] | 430 | else if (CServer::serverLevel == 2) |
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| 431 | { |
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| 432 | client->checkBuffers(); |
---|
[1378] | 433 | return server->eventLoop(enableEventsProcessing); |
---|
[1130] | 434 | } |
---|
| 435 | } |
---|
[1054] | 436 | |
---|
[509] | 437 | //! Terminate a context |
---|
[300] | 438 | void CContext::finalize(void) |
---|
| 439 | { |
---|
[1418] | 440 | if (hasClient && !hasServer) // For now we only use server level 1 to read data |
---|
| 441 | { |
---|
| 442 | doPreTimestepOperationsForEnabledReadModeFiles(); |
---|
| 443 | } |
---|
[1130] | 444 | // Send registry upon calling the function the first time |
---|
| 445 | if (countChildCtx_ == 0) |
---|
| 446 | if (hasClient) sendRegistry() ; |
---|
| 447 | |
---|
| 448 | // Client: |
---|
| 449 | // (1) blocking send context finalize to its server |
---|
| 450 | // (2) blocking receive context finalize from its server |
---|
[1194] | 451 | // (3) some memory deallocations |
---|
[1130] | 452 | if (CXios::isClient) |
---|
[1009] | 453 | { |
---|
[1130] | 454 | // Make sure that client (model) enters the loop only once |
---|
| 455 | if (countChildCtx_ < 1) |
---|
| 456 | { |
---|
| 457 | ++countChildCtx_; |
---|
[983] | 458 | |
---|
[1130] | 459 | client->finalize(); |
---|
| 460 | while (client->havePendingRequests()) |
---|
| 461 | client->checkBuffers(); |
---|
[1054] | 462 | |
---|
[1130] | 463 | while (!server->hasFinished()) |
---|
| 464 | server->eventLoop(); |
---|
[1139] | 465 | |
---|
[1194] | 466 | if (hasServer) // Mode attache |
---|
| 467 | { |
---|
| 468 | closeAllFile(); |
---|
| 469 | registryOut->hierarchicalGatherRegistry() ; |
---|
| 470 | if (server->intraCommRank==0) CXios::globalRegistry->mergeRegistry(*registryOut) ; |
---|
| 471 | } |
---|
[1139] | 472 | |
---|
[1194] | 473 | //! Deallocate client buffers |
---|
| 474 | client->releaseBuffers(); |
---|
| 475 | |
---|
| 476 | //! Free internally allocated communicators |
---|
| 477 | for (std::list<MPI_Comm>::iterator it = comms.begin(); it != comms.end(); ++it) |
---|
| 478 | MPI_Comm_free(&(*it)); |
---|
| 479 | comms.clear(); |
---|
| 480 | |
---|
| 481 | info(20)<<"CContext: Context <"<<getId()<<"> is finalized."<<endl; |
---|
[1130] | 482 | } |
---|
| 483 | } |
---|
| 484 | else if (CXios::isServer) |
---|
| 485 | { |
---|
[1194] | 486 | // First context finalize message received from a model |
---|
| 487 | // Send context finalize to its child contexts (if any) |
---|
[1130] | 488 | if (countChildCtx_ == 0) |
---|
[1009] | 489 | for (int i = 0; i < clientPrimServer.size(); ++i) |
---|
| 490 | clientPrimServer[i]->finalize(); |
---|
[983] | 491 | |
---|
[1139] | 492 | // (Last) context finalized message received |
---|
[1130] | 493 | if (countChildCtx_ == clientPrimServer.size()) |
---|
[1194] | 494 | { |
---|
| 495 | // Blocking send of context finalize message to its client (e.g. primary server or model) |
---|
[1378] | 496 | info(100)<<"DEBUG: context "<<getId()<<" Send client finalize<<"<<endl ; |
---|
[1130] | 497 | client->finalize(); |
---|
[1194] | 498 | bool bufferReleased; |
---|
| 499 | do |
---|
| 500 | { |
---|
| 501 | client->checkBuffers(); |
---|
| 502 | bufferReleased = !client->havePendingRequests(); |
---|
| 503 | } while (!bufferReleased); |
---|
| 504 | finalized = true; |
---|
[983] | 505 | |
---|
[1232] | 506 | closeAllFile(); // Just move to here to make sure that server-level 1 can close files |
---|
[1194] | 507 | if (hasServer && !hasClient) |
---|
[1232] | 508 | { |
---|
[1194] | 509 | registryOut->hierarchicalGatherRegistry() ; |
---|
| 510 | if (server->intraCommRank==0) CXios::globalRegistry->mergeRegistry(*registryOut) ; |
---|
| 511 | } |
---|
[1077] | 512 | |
---|
[1194] | 513 | //! Deallocate client buffers |
---|
| 514 | client->releaseBuffers(); |
---|
| 515 | for (int i = 0; i < clientPrimServer.size(); ++i) |
---|
| 516 | clientPrimServer[i]->releaseBuffers(); |
---|
[1139] | 517 | |
---|
[1194] | 518 | //! Free internally allocated communicators |
---|
| 519 | for (std::list<MPI_Comm>::iterator it = comms.begin(); it != comms.end(); ++it) |
---|
| 520 | MPI_Comm_free(&(*it)); |
---|
| 521 | comms.clear(); |
---|
| 522 | |
---|
| 523 | info(20)<<"CContext: Context <"<<getId()<<"> is finalized."<<endl; |
---|
[1139] | 524 | } |
---|
| 525 | |
---|
[1194] | 526 | ++countChildCtx_; |
---|
[1130] | 527 | } |
---|
| 528 | } |
---|
| 529 | |
---|
[1071] | 530 | //! Free internally allocated communicators |
---|
| 531 | void CContext::freeComms(void) |
---|
| 532 | { |
---|
| 533 | for (std::list<MPI_Comm>::iterator it = comms.begin(); it != comms.end(); ++it) |
---|
| 534 | MPI_Comm_free(&(*it)); |
---|
| 535 | comms.clear(); |
---|
| 536 | } |
---|
[509] | 537 | |
---|
[1130] | 538 | //! Deallocate buffers allocated by clientContexts |
---|
| 539 | void CContext::releaseClientBuffers(void) |
---|
| 540 | { |
---|
| 541 | client->releaseBuffers(); |
---|
| 542 | for (int i = 0; i < clientPrimServer.size(); ++i) |
---|
| 543 | clientPrimServer[i]->releaseBuffers(); |
---|
| 544 | } |
---|
| 545 | |
---|
[1025] | 546 | void CContext::postProcessingGlobalAttributes() |
---|
[300] | 547 | { |
---|
[1144] | 548 | if (allProcessed) return; |
---|
[1025] | 549 | |
---|
[1144] | 550 | // After xml is parsed, there are some more works with post processing |
---|
| 551 | postProcessing(); |
---|
[983] | 552 | |
---|
[1144] | 553 | // Check grid and calculate its distribution |
---|
[1232] | 554 | checkGridEnabledFields(); |
---|
| 555 | |
---|
[1208] | 556 | // Distribute files between secondary servers according to the data size |
---|
| 557 | distributeFiles(); |
---|
| 558 | |
---|
[1330] | 559 | setClientServerBuffer(client, (hasClient && !hasServer)); |
---|
[1255] | 560 | for (int i = 0; i < clientPrimServer.size(); ++i) |
---|
[1330] | 561 | setClientServerBuffer(clientPrimServer[i], true); |
---|
[300] | 562 | |
---|
[983] | 563 | if (hasClient) |
---|
[510] | 564 | { |
---|
[509] | 565 | // Send all attributes of current context to server |
---|
| 566 | this->sendAllAttributesToServer(); |
---|
[459] | 567 | |
---|
[549] | 568 | // Send all attributes of current calendar |
---|
| 569 | CCalendarWrapper::get(CCalendarWrapper::GetDefName())->sendAllAttributesToServer(); |
---|
| 570 | |
---|
[509] | 571 | // We have enough information to send to server |
---|
[1021] | 572 | // First of all, send all enabled files |
---|
[1232] | 573 | sendEnabledFiles(this->enabledWriteModeFiles); |
---|
| 574 | // We only use server-level 1 (for now) to read data |
---|
| 575 | if (!hasServer) |
---|
| 576 | sendEnabledFiles(this->enabledReadModeFiles); |
---|
[509] | 577 | |
---|
[1232] | 578 | // Then, send all enabled fields |
---|
| 579 | sendEnabledFieldsInFiles(this->enabledWriteModeFiles); |
---|
| 580 | if (!hasServer) |
---|
| 581 | sendEnabledFieldsInFiles(this->enabledReadModeFiles); |
---|
[1021] | 582 | |
---|
[1239] | 583 | // Then, check whether we have domain_ref, axis_ref or scalar_ref attached to the enabled fields |
---|
| 584 | // If any, so send them to server |
---|
[1232] | 585 | sendRefDomainsAxisScalars(this->enabledWriteModeFiles); |
---|
| 586 | if (!hasServer) |
---|
| 587 | sendRefDomainsAxisScalars(this->enabledReadModeFiles); |
---|
[1021] | 588 | |
---|
[1239] | 589 | // Check whether enabled fields have grid_ref, if any, send this info to server |
---|
[1237] | 590 | sendRefGrid(this->enabledFiles); |
---|
| 591 | // This code may be useful in the future when we want to seperate completely read and write |
---|
| 592 | // sendRefGrid(this->enabledWriteModeFiles); |
---|
| 593 | // if (!hasServer) |
---|
| 594 | // sendRefGrid(this->enabledReadModeFiles); |
---|
[1239] | 595 | |
---|
| 596 | // A grid of enabled fields composed of several components which must be checked then their |
---|
| 597 | // checked attributes should be sent to server |
---|
| 598 | sendGridComponentEnabledFieldsInFiles(this->enabledFiles); // This code can be seperated in two (one for reading, another for writing) |
---|
[1021] | 599 | |
---|
[983] | 600 | // We have a xml tree on the server side and now, it should be also processed |
---|
[1239] | 601 | sendPostProcessing(); |
---|
[1232] | 602 | |
---|
[1239] | 603 | // Finally, we send information of grid itself to server |
---|
| 604 | sendGridEnabledFieldsInFiles(this->enabledWriteModeFiles); |
---|
| 605 | if (!hasServer) |
---|
[1232] | 606 | sendGridEnabledFieldsInFiles(this->enabledReadModeFiles); |
---|
[983] | 607 | } |
---|
[1025] | 608 | allProcessed = true; |
---|
| 609 | } |
---|
[983] | 610 | |
---|
[1025] | 611 | void CContext::sendPostProcessingGlobalAttributes() |
---|
| 612 | { |
---|
[1027] | 613 | // Use correct context client to send message |
---|
[1030] | 614 | // int nbSrvPools = (hasServer) ? clientPrimServer.size() : 1; |
---|
| 615 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1027] | 616 | for (int i = 0; i < nbSrvPools; ++i) |
---|
| 617 | { |
---|
| 618 | CContextClient* contextClientTmp = (0 != clientPrimServer.size()) ? clientPrimServer[i] : client; |
---|
| 619 | CEventClient event(getType(),EVENT_ID_POST_PROCESS_GLOBAL_ATTRIBUTES); |
---|
[987] | 620 | |
---|
[1027] | 621 | if (contextClientTmp->isServerLeader()) |
---|
| 622 | { |
---|
| 623 | CMessage msg; |
---|
[1099] | 624 | if (hasServer) |
---|
| 625 | msg<<this->getIdServer(i); |
---|
| 626 | else |
---|
| 627 | msg<<this->getIdServer(); |
---|
[1027] | 628 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 629 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 630 | event.push(*itRank,1,msg); |
---|
| 631 | contextClientTmp->sendEvent(event); |
---|
| 632 | } |
---|
| 633 | else contextClientTmp->sendEvent(event); |
---|
[1025] | 634 | } |
---|
| 635 | } |
---|
| 636 | |
---|
| 637 | void CContext::recvPostProcessingGlobalAttributes(CEventServer& event) |
---|
| 638 | { |
---|
| 639 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 640 | string id; |
---|
| 641 | *buffer>>id; |
---|
[1099] | 642 | get(id)->recvPostProcessingGlobalAttributes(*buffer); |
---|
[1025] | 643 | } |
---|
| 644 | |
---|
| 645 | void CContext::recvPostProcessingGlobalAttributes(CBufferIn& buffer) |
---|
[1144] | 646 | { |
---|
[1025] | 647 | postProcessingGlobalAttributes(); |
---|
| 648 | } |
---|
| 649 | |
---|
| 650 | /*! |
---|
| 651 | \brief Close all the context defintion and do processing data |
---|
| 652 | After everything is well defined on client side, they will be processed and sent to server |
---|
| 653 | From the version 2.0, sever and client work no more on the same database. Moreover, client(s) will send |
---|
| 654 | all necessary information to server, from which each server can build its own database. |
---|
| 655 | Because the role of server is to write out field data on a specific netcdf file, |
---|
| 656 | the only information that it needs is the enabled files |
---|
| 657 | and the active fields (fields will be written onto active files) |
---|
| 658 | */ |
---|
| 659 | void CContext::closeDefinition(void) |
---|
| 660 | { |
---|
[1158] | 661 | CTimer::get("Context : close definition").resume() ; |
---|
[1025] | 662 | postProcessingGlobalAttributes(); |
---|
[983] | 663 | |
---|
[1130] | 664 | if (hasClient) sendPostProcessingGlobalAttributes(); |
---|
| 665 | |
---|
| 666 | // There are some processings that should be done after all of above. For example: check mask or index |
---|
[1025] | 667 | this->buildFilterGraphOfEnabledFields(); |
---|
| 668 | |
---|
[1130] | 669 | if (hasClient && !hasServer) |
---|
[509] | 670 | { |
---|
[1130] | 671 | buildFilterGraphOfFieldsWithReadAccess(); |
---|
[1358] | 672 | postProcessFilterGraph(); |
---|
[509] | 673 | } |
---|
[1144] | 674 | |
---|
[1232] | 675 | checkGridEnabledFields(); |
---|
[509] | 676 | |
---|
[1025] | 677 | if (hasClient) this->sendProcessingGridOfEnabledFields(); |
---|
[1077] | 678 | if (hasClient) this->sendCloseDefinition(); |
---|
[510] | 679 | |
---|
[584] | 680 | // Nettoyage de l'arborescence |
---|
[983] | 681 | if (hasClient) CleanTree(); // Only on client side?? |
---|
[510] | 682 | |
---|
[598] | 683 | if (hasClient) |
---|
| 684 | { |
---|
| 685 | sendCreateFileHeader(); |
---|
[983] | 686 | if (!hasServer) startPrefetchingOfEnabledReadModeFiles(); |
---|
[598] | 687 | } |
---|
[1158] | 688 | CTimer::get("Context : close definition").suspend() ; |
---|
[300] | 689 | } |
---|
[509] | 690 | |
---|
[1232] | 691 | void CContext::findAllEnabledFieldsInFiles(const std::vector<CFile*>& activeFiles) |
---|
[300] | 692 | { |
---|
[1232] | 693 | for (unsigned int i = 0; i < activeFiles.size(); i++) |
---|
| 694 | (void)activeFiles[i]->getEnabledFields(); |
---|
[300] | 695 | } |
---|
| 696 | |
---|
[775] | 697 | void CContext::readAttributesOfEnabledFieldsInReadModeFiles() |
---|
| 698 | { |
---|
| 699 | for (unsigned int i = 0; i < this->enabledReadModeFiles.size(); ++i) |
---|
| 700 | (void)this->enabledReadModeFiles[i]->readAttributesOfEnabledFieldsInReadMode(); |
---|
| 701 | } |
---|
| 702 | |
---|
[1239] | 703 | void CContext::sendGridComponentEnabledFieldsInFiles(const std::vector<CFile*>& activeFiles) |
---|
| 704 | { |
---|
| 705 | int size = activeFiles.size(); |
---|
| 706 | for (int i = 0; i < size; ++i) |
---|
| 707 | { |
---|
| 708 | activeFiles[i]->sendGridComponentOfEnabledFields(); |
---|
| 709 | } |
---|
| 710 | } |
---|
| 711 | |
---|
[1232] | 712 | /*! |
---|
| 713 | Send active (enabled) fields in file from a client to others |
---|
| 714 | \param [in] activeFiles files contains enabled fields to send |
---|
| 715 | */ |
---|
| 716 | void CContext::sendGridEnabledFieldsInFiles(const std::vector<CFile*>& activeFiles) |
---|
[1025] | 717 | { |
---|
[1232] | 718 | int size = activeFiles.size(); |
---|
[1025] | 719 | for (int i = 0; i < size; ++i) |
---|
[1099] | 720 | { |
---|
[1232] | 721 | activeFiles[i]->sendGridOfEnabledFields(); |
---|
[1025] | 722 | } |
---|
| 723 | } |
---|
| 724 | |
---|
[1099] | 725 | void CContext::checkGridEnabledFields() |
---|
| 726 | { |
---|
[1232] | 727 | int size = enabledFiles.size(); |
---|
[1099] | 728 | for (int i = 0; i < size; ++i) |
---|
| 729 | { |
---|
[1232] | 730 | enabledFiles[i]->checkGridOfEnabledFields(); |
---|
[1099] | 731 | } |
---|
| 732 | } |
---|
[1025] | 733 | |
---|
[1232] | 734 | /*! |
---|
| 735 | Check grid of active (enabled) fields in file |
---|
| 736 | \param [in] activeFiles files contains enabled fields whose grid needs checking |
---|
| 737 | */ |
---|
| 738 | void CContext::checkGridEnabledFieldsInFiles(const std::vector<CFile*>& activeFiles) |
---|
| 739 | { |
---|
| 740 | int size = activeFiles.size(); |
---|
| 741 | for (int i = 0; i < size; ++i) |
---|
| 742 | { |
---|
| 743 | activeFiles[i]->checkGridOfEnabledFields(); |
---|
| 744 | } |
---|
| 745 | } |
---|
| 746 | |
---|
| 747 | /*! |
---|
| 748 | Go up the hierachical tree via field_ref and do check of attributes of fields |
---|
| 749 | This can be done in a client then all computed information will be sent from this client to others |
---|
| 750 | \param [in] sendToServer Flag to indicate whether calculated information will be sent |
---|
| 751 | */ |
---|
[823] | 752 | void CContext::solveOnlyRefOfEnabledFields(bool sendToServer) |
---|
| 753 | { |
---|
| 754 | int size = this->enabledFiles.size(); |
---|
| 755 | for (int i = 0; i < size; ++i) |
---|
| 756 | { |
---|
| 757 | this->enabledFiles[i]->solveOnlyRefOfEnabledFields(sendToServer); |
---|
| 758 | } |
---|
| 759 | |
---|
| 760 | for (int i = 0; i < size; ++i) |
---|
| 761 | { |
---|
| 762 | this->enabledFiles[i]->generateNewTransformationGridDest(); |
---|
| 763 | } |
---|
| 764 | } |
---|
| 765 | |
---|
[1232] | 766 | /*! |
---|
| 767 | Go up the hierachical tree via field_ref and do check of attributes of fields. |
---|
| 768 | The transformation can be done in this step. |
---|
| 769 | All computed information will be sent from this client to others. |
---|
| 770 | \param [in] sendToServer Flag to indicate whether calculated information will be sent |
---|
| 771 | */ |
---|
[1129] | 772 | void CContext::solveAllRefOfEnabledFieldsAndTransform(bool sendToServer) |
---|
[300] | 773 | { |
---|
[509] | 774 | int size = this->enabledFiles.size(); |
---|
| 775 | for (int i = 0; i < size; ++i) |
---|
| 776 | { |
---|
[1129] | 777 | this->enabledFiles[i]->solveAllRefOfEnabledFieldsAndTransform(sendToServer); |
---|
[509] | 778 | } |
---|
[300] | 779 | } |
---|
| 780 | |
---|
[640] | 781 | void CContext::buildFilterGraphOfEnabledFields() |
---|
| 782 | { |
---|
| 783 | int size = this->enabledFiles.size(); |
---|
| 784 | for (int i = 0; i < size; ++i) |
---|
| 785 | { |
---|
| 786 | this->enabledFiles[i]->buildFilterGraphOfEnabledFields(garbageCollector); |
---|
| 787 | } |
---|
| 788 | } |
---|
| 789 | |
---|
[1358] | 790 | void CContext::postProcessFilterGraph() |
---|
| 791 | { |
---|
| 792 | int size = enabledFiles.size(); |
---|
| 793 | for (int i = 0; i < size; ++i) |
---|
| 794 | { |
---|
| 795 | enabledFiles[i]->postProcessFilterGraph(); |
---|
| 796 | } |
---|
| 797 | } |
---|
| 798 | |
---|
[598] | 799 | void CContext::startPrefetchingOfEnabledReadModeFiles() |
---|
| 800 | { |
---|
| 801 | int size = enabledReadModeFiles.size(); |
---|
| 802 | for (int i = 0; i < size; ++i) |
---|
| 803 | { |
---|
| 804 | enabledReadModeFiles[i]->prefetchEnabledReadModeFields(); |
---|
| 805 | } |
---|
| 806 | } |
---|
| 807 | |
---|
[1358] | 808 | void CContext::doPreTimestepOperationsForEnabledReadModeFiles() |
---|
| 809 | { |
---|
| 810 | int size = enabledReadModeFiles.size(); |
---|
| 811 | for (int i = 0; i < size; ++i) |
---|
| 812 | { |
---|
| 813 | enabledReadModeFiles[i]->doPreTimestepOperationsForEnabledReadModeFields(); |
---|
| 814 | } |
---|
| 815 | } |
---|
| 816 | |
---|
[1318] | 817 | void CContext::doPostTimestepOperationsForEnabledReadModeFiles() |
---|
[598] | 818 | { |
---|
| 819 | int size = enabledReadModeFiles.size(); |
---|
| 820 | for (int i = 0; i < size; ++i) |
---|
| 821 | { |
---|
[1318] | 822 | enabledReadModeFiles[i]->doPostTimestepOperationsForEnabledReadModeFields(); |
---|
[598] | 823 | } |
---|
| 824 | } |
---|
| 825 | |
---|
[593] | 826 | void CContext::findFieldsWithReadAccess(void) |
---|
| 827 | { |
---|
| 828 | fieldsWithReadAccess.clear(); |
---|
| 829 | const vector<CField*> allFields = CField::getAll(); |
---|
| 830 | for (size_t i = 0; i < allFields.size(); ++i) |
---|
| 831 | { |
---|
[740] | 832 | CField* field = allFields[i]; |
---|
| 833 | |
---|
| 834 | if (field->file && !field->file->mode.isEmpty() && field->file->mode == CFile::mode_attr::read) |
---|
| 835 | field->read_access = true; |
---|
| 836 | else if (!field->read_access.isEmpty() && field->read_access && (field->enabled.isEmpty() || field->enabled)) |
---|
| 837 | fieldsWithReadAccess.push_back(field); |
---|
[593] | 838 | } |
---|
| 839 | } |
---|
| 840 | |
---|
| 841 | void CContext::solveAllRefOfFieldsWithReadAccess() |
---|
| 842 | { |
---|
| 843 | for (size_t i = 0; i < fieldsWithReadAccess.size(); ++i) |
---|
| 844 | fieldsWithReadAccess[i]->solveAllReferenceEnabledField(false); |
---|
| 845 | } |
---|
| 846 | |
---|
[640] | 847 | void CContext::buildFilterGraphOfFieldsWithReadAccess() |
---|
| 848 | { |
---|
| 849 | for (size_t i = 0; i < fieldsWithReadAccess.size(); ++i) |
---|
| 850 | fieldsWithReadAccess[i]->buildFilterGraph(garbageCollector, true); |
---|
| 851 | } |
---|
| 852 | |
---|
[445] | 853 | void CContext::solveAllInheritance(bool apply) |
---|
[300] | 854 | { |
---|
| 855 | // Résolution des héritages descendants (cà d des héritages de groupes) |
---|
| 856 | // pour chacun des contextes. |
---|
[445] | 857 | solveDescInheritance(apply); |
---|
[300] | 858 | |
---|
| 859 | // Résolution des héritages par référence au niveau des fichiers. |
---|
[549] | 860 | const vector<CFile*> allFiles=CFile::getAll(); |
---|
[540] | 861 | const vector<CGrid*> allGrids= CGrid::getAll(); |
---|
[300] | 862 | |
---|
[983] | 863 | if (hasClient && !hasServer) |
---|
| 864 | //if (hasClient) |
---|
[540] | 865 | { |
---|
[510] | 866 | for (unsigned int i = 0; i < allFiles.size(); i++) |
---|
| 867 | allFiles[i]->solveFieldRefInheritance(apply); |
---|
[540] | 868 | } |
---|
| 869 | |
---|
| 870 | unsigned int vecSize = allGrids.size(); |
---|
| 871 | unsigned int i = 0; |
---|
| 872 | for (i = 0; i < vecSize; ++i) |
---|
| 873 | allGrids[i]->solveDomainAxisRefInheritance(apply); |
---|
| 874 | |
---|
[300] | 875 | } |
---|
| 876 | |
---|
| 877 | void CContext::findEnabledFiles(void) |
---|
| 878 | { |
---|
[347] | 879 | const std::vector<CFile*> allFiles = CFile::getAll(); |
---|
[1158] | 880 | const CDate& initDate = calendar->getInitDate(); |
---|
[300] | 881 | |
---|
| 882 | for (unsigned int i = 0; i < allFiles.size(); i++) |
---|
| 883 | if (!allFiles[i]->enabled.isEmpty()) // Si l'attribut 'enabled' est défini. |
---|
[430] | 884 | { |
---|
[300] | 885 | if (allFiles[i]->enabled.getValue()) // Si l'attribut 'enabled' est fixé à vrai. |
---|
[1158] | 886 | { |
---|
[1489] | 887 | if (allFiles[i]->output_freq.isEmpty()) |
---|
[1488] | 888 | { |
---|
| 889 | ERROR("CContext::findEnabledFiles()", |
---|
| 890 | << "Mandatory attribute output_freq must be defined for file \""<<allFiles[i]->getFileOutputName() |
---|
| 891 | <<" \".") |
---|
| 892 | } |
---|
[1158] | 893 | if ((initDate + allFiles[i]->output_freq.getValue()) < (initDate + this->getCalendar()->getTimeStep())) |
---|
| 894 | { |
---|
| 895 | error(0)<<"WARNING: void CContext::findEnabledFiles()"<<endl |
---|
| 896 | << "Output frequency in file \""<<allFiles[i]->getFileOutputName() |
---|
| 897 | <<"\" is less than the time step. File will not be written."<<endl; |
---|
| 898 | } |
---|
| 899 | else |
---|
[300] | 900 | enabledFiles.push_back(allFiles[i]); |
---|
[1158] | 901 | } |
---|
[430] | 902 | } |
---|
[1158] | 903 | else |
---|
| 904 | { |
---|
[1489] | 905 | if (allFiles[i]->output_freq.isEmpty()) |
---|
[1488] | 906 | { |
---|
| 907 | ERROR("CContext::findEnabledFiles()", |
---|
| 908 | << "Mandatory attribute output_freq must be defined for file \""<<allFiles[i]->getFileOutputName() |
---|
| 909 | <<" \".") |
---|
| 910 | } |
---|
[1158] | 911 | if ( (initDate + allFiles[i]->output_freq.getValue()) < (initDate + this->getCalendar()->getTimeStep())) |
---|
| 912 | { |
---|
| 913 | error(0)<<"WARNING: void CContext::findEnabledFiles()"<<endl |
---|
| 914 | << "Output frequency in file \""<<allFiles[i]->getFileOutputName() |
---|
| 915 | <<"\" is less than the time step. File will not be written."<<endl; |
---|
| 916 | } |
---|
| 917 | else |
---|
| 918 | enabledFiles.push_back(allFiles[i]); // otherwise true by default |
---|
| 919 | } |
---|
[300] | 920 | |
---|
| 921 | if (enabledFiles.size() == 0) |
---|
| 922 | DEBUG(<<"Aucun fichier ne va être sorti dans le contexte nommé \"" |
---|
| 923 | << getId() << "\" !"); |
---|
[1021] | 924 | |
---|
[300] | 925 | } |
---|
| 926 | |
---|
[1208] | 927 | void CContext::distributeFiles(void) |
---|
| 928 | { |
---|
[1349] | 929 | bool distFileMemory=false ; |
---|
| 930 | distFileMemory=CXios::getin<bool>("server2_dist_file_memory", distFileMemory); |
---|
| 931 | |
---|
| 932 | if (distFileMemory) distributeFileOverMemoryBandwith() ; |
---|
| 933 | else distributeFileOverBandwith() ; |
---|
| 934 | } |
---|
| 935 | |
---|
| 936 | |
---|
| 937 | void CContext::distributeFileOverBandwith(void) |
---|
| 938 | { |
---|
[1215] | 939 | double eps=std::numeric_limits<double>::epsilon()*10 ; |
---|
| 940 | |
---|
[1208] | 941 | // If primary server |
---|
| 942 | if (hasServer && hasClient) |
---|
| 943 | { |
---|
[1349] | 944 | std::ofstream ofs(("distribute_file_"+getId()+".dat").c_str(), std::ofstream::out); |
---|
[1212] | 945 | int nbPools = clientPrimServer.size(); |
---|
| 946 | |
---|
[1208] | 947 | // (1) Find all enabled files in write mode |
---|
[1232] | 948 | // for (int i = 0; i < this->enabledFiles.size(); ++i) |
---|
| 949 | // { |
---|
| 950 | // if (enabledFiles[i]->mode.isEmpty() || (!enabledFiles[i]->mode.isEmpty() && enabledFiles[i]->mode.getValue() == CFile::mode_attr::write )) |
---|
| 951 | // enabledWriteModeFiles.push_back(enabledFiles[i]); |
---|
| 952 | // } |
---|
[1208] | 953 | |
---|
| 954 | // (2) Estimate the data volume for each file |
---|
| 955 | int size = this->enabledWriteModeFiles.size(); |
---|
[1215] | 956 | std::vector<std::pair<double, CFile*> > dataSizeMap; |
---|
| 957 | double dataPerPool = 0; |
---|
| 958 | int nfield=0 ; |
---|
[1349] | 959 | ofs<<size<<endl ; |
---|
[1208] | 960 | for (size_t i = 0; i < size; ++i) |
---|
| 961 | { |
---|
| 962 | CFile* file = this->enabledWriteModeFiles[i]; |
---|
[1349] | 963 | ofs<<file->getId()<<endl ; |
---|
[1215] | 964 | StdSize dataSize=0; |
---|
[1208] | 965 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
| 966 | size_t numEnabledFields = enabledFields.size(); |
---|
[1349] | 967 | ofs<<numEnabledFields<<endl ; |
---|
| 968 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
| 969 | { |
---|
| 970 | dataSize += enabledFields[j]->getGlobalWrittenSize() ; |
---|
| 971 | ofs<<enabledFields[j]->grid->getId()<<endl ; |
---|
| 972 | ofs<<enabledFields[j]->getGlobalWrittenSize()<<endl ; |
---|
| 973 | } |
---|
[1215] | 974 | double outFreqSec = (Time)(calendar->getCurrentDate()+file->output_freq)-(Time)(calendar->getCurrentDate()) ; |
---|
| 975 | double dataSizeSec= dataSize/ outFreqSec; |
---|
[1349] | 976 | ofs<<dataSizeSec<<endl ; |
---|
[1215] | 977 | nfield++ ; |
---|
| 978 | // add epsilon*nField to dataSizeSec in order to preserve reproductive ordering when sorting |
---|
| 979 | dataSizeMap.push_back(make_pair(dataSizeSec + dataSizeSec * eps * nfield , file)); |
---|
| 980 | dataPerPool += dataSizeSec; |
---|
[1208] | 981 | } |
---|
[1212] | 982 | dataPerPool /= nbPools; |
---|
[1208] | 983 | std::sort(dataSizeMap.begin(), dataSizeMap.end()); |
---|
| 984 | |
---|
[1212] | 985 | // (3) Assign contextClient to each enabled file |
---|
[1215] | 986 | |
---|
| 987 | std::multimap<double,int> poolDataSize ; |
---|
| 988 | // multimap is not garanty to preserve stable sorting in c++98 but it seems it does for c++11 |
---|
| 989 | |
---|
| 990 | int j; |
---|
| 991 | double dataSize ; |
---|
| 992 | for (j = 0 ; j < nbPools ; ++j) poolDataSize.insert(std::pair<double,int>(0.,j)) ; |
---|
| 993 | |
---|
[1212] | 994 | for (int i = dataSizeMap.size()-1; i >= 0; --i) |
---|
[1208] | 995 | { |
---|
[1215] | 996 | dataSize=(*poolDataSize.begin()).first ; |
---|
| 997 | j=(*poolDataSize.begin()).second ; |
---|
| 998 | dataSizeMap[i].second->setContextClient(clientPrimServer[j]); |
---|
| 999 | dataSize+=dataSizeMap[i].first; |
---|
| 1000 | poolDataSize.erase(poolDataSize.begin()) ; |
---|
| 1001 | poolDataSize.insert(std::pair<double,int>(dataSize,j)) ; |
---|
[1208] | 1002 | } |
---|
[1212] | 1003 | |
---|
[1215] | 1004 | for (std::multimap<double,int>:: iterator it=poolDataSize.begin() ; it!=poolDataSize.end(); ++it) info(30)<<"Load Balancing for servers (perfect=1) : "<<it->second<<" : ratio "<<it->first*1./dataPerPool<<endl ; |
---|
| 1005 | |
---|
[1212] | 1006 | for (int i = 0; i < this->enabledReadModeFiles.size(); ++i) |
---|
[1232] | 1007 | { |
---|
| 1008 | enabledReadModeFiles[i]->setContextClient(client); |
---|
| 1009 | } |
---|
[1208] | 1010 | } |
---|
| 1011 | else |
---|
| 1012 | { |
---|
| 1013 | for (int i = 0; i < this->enabledFiles.size(); ++i) |
---|
| 1014 | enabledFiles[i]->setContextClient(client); |
---|
| 1015 | } |
---|
| 1016 | } |
---|
| 1017 | |
---|
[1349] | 1018 | void CContext::distributeFileOverMemoryBandwith(void) |
---|
| 1019 | { |
---|
| 1020 | // If primary server |
---|
| 1021 | if (hasServer && hasClient) |
---|
| 1022 | { |
---|
| 1023 | int nbPools = clientPrimServer.size(); |
---|
| 1024 | double ratio=0.5 ; |
---|
| 1025 | ratio=CXios::getin<double>("server2_dist_file_memory_ratio", ratio); |
---|
| 1026 | |
---|
| 1027 | int nFiles = this->enabledWriteModeFiles.size(); |
---|
| 1028 | vector<SDistFile> files(nFiles); |
---|
| 1029 | vector<SDistGrid> grids; |
---|
| 1030 | map<string,int> gridMap ; |
---|
| 1031 | string gridId; |
---|
| 1032 | int gridIndex=0 ; |
---|
| 1033 | |
---|
| 1034 | for (size_t i = 0; i < nFiles; ++i) |
---|
| 1035 | { |
---|
| 1036 | StdSize dataSize=0; |
---|
| 1037 | CFile* file = this->enabledWriteModeFiles[i]; |
---|
| 1038 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
| 1039 | size_t numEnabledFields = enabledFields.size(); |
---|
| 1040 | |
---|
| 1041 | files[i].id_=file->getId() ; |
---|
| 1042 | files[i].nbGrids_=numEnabledFields; |
---|
| 1043 | files[i].assignedGrid_ = new int[files[i].nbGrids_] ; |
---|
| 1044 | |
---|
| 1045 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
| 1046 | { |
---|
| 1047 | gridId=enabledFields[j]->grid->getId() ; |
---|
| 1048 | if (gridMap.find(gridId)==gridMap.end()) |
---|
| 1049 | { |
---|
| 1050 | gridMap[gridId]=gridIndex ; |
---|
| 1051 | SDistGrid newGrid; |
---|
| 1052 | grids.push_back(newGrid) ; |
---|
| 1053 | gridIndex++ ; |
---|
| 1054 | } |
---|
| 1055 | files[i].assignedGrid_[j]=gridMap[gridId] ; |
---|
| 1056 | grids[files[i].assignedGrid_[j]].size_=enabledFields[j]->getGlobalWrittenSize() ; |
---|
| 1057 | dataSize += enabledFields[j]->getGlobalWrittenSize() ; // usefull |
---|
| 1058 | } |
---|
| 1059 | double outFreqSec = (Time)(calendar->getCurrentDate()+file->output_freq)-(Time)(calendar->getCurrentDate()) ; |
---|
| 1060 | files[i].bandwith_= dataSize/ outFreqSec ; |
---|
| 1061 | } |
---|
| 1062 | |
---|
| 1063 | double bandwith=0 ; |
---|
| 1064 | double memory=0 ; |
---|
| 1065 | |
---|
| 1066 | for(int i=0; i<nFiles; i++) bandwith+=files[i].bandwith_ ; |
---|
| 1067 | for(int i=0; i<nFiles; i++) files[i].bandwith_ = files[i].bandwith_/bandwith * ratio ; |
---|
| 1068 | |
---|
| 1069 | for(int i=0; i<grids.size(); i++) memory+=grids[i].size_ ; |
---|
| 1070 | for(int i=0; i<grids.size(); i++) grids[i].size_ = grids[i].size_ / memory * (1.0-ratio) ; |
---|
| 1071 | |
---|
| 1072 | distributeFileOverServer2(nbPools, grids.size(), &grids[0], nFiles, &files[0]) ; |
---|
| 1073 | |
---|
| 1074 | vector<double> memorySize(nbPools,0.) ; |
---|
| 1075 | vector< set<int> > serverGrids(nbPools) ; |
---|
| 1076 | vector<double> bandwithSize(nbPools,0.) ; |
---|
| 1077 | |
---|
| 1078 | for (size_t i = 0; i < nFiles; ++i) |
---|
| 1079 | { |
---|
| 1080 | bandwithSize[files[i].assignedServer_] += files[i].bandwith_* bandwith /ratio ; |
---|
| 1081 | for(int j=0 ; j<files[i].nbGrids_;j++) |
---|
| 1082 | { |
---|
| 1083 | if (serverGrids[files[i].assignedServer_].find(files[i].assignedGrid_[j]) == serverGrids[files[i].assignedServer_].end()) |
---|
| 1084 | { |
---|
| 1085 | memorySize[files[i].assignedServer_]+= grids[files[i].assignedGrid_[j]].size_ * memory / (1.0-ratio); |
---|
| 1086 | serverGrids[files[i].assignedServer_].insert(files[i].assignedGrid_[j]) ; |
---|
| 1087 | } |
---|
| 1088 | } |
---|
| 1089 | enabledWriteModeFiles[i]->setContextClient(clientPrimServer[files[i].assignedServer_]) ; |
---|
| 1090 | delete [] files[i].assignedGrid_ ; |
---|
| 1091 | } |
---|
| 1092 | |
---|
| 1093 | for (int i = 0; i < nbPools; ++i) info(100)<<"Pool server level2 "<<i<<" assigned file bandwith "<<bandwithSize[i]*86400.*4./1024/1024.<<" Mb / days"<<endl ; |
---|
| 1094 | for (int i = 0; i < nbPools; ++i) info(100)<<"Pool server level2 "<<i<<" assigned grid memory "<<memorySize[i]*100/1024./1024.<<" Mb"<<endl ; |
---|
| 1095 | |
---|
| 1096 | |
---|
| 1097 | for (int i = 0; i < this->enabledReadModeFiles.size(); ++i) |
---|
| 1098 | { |
---|
| 1099 | enabledReadModeFiles[i]->setContextClient(client); |
---|
| 1100 | } |
---|
| 1101 | |
---|
| 1102 | } |
---|
| 1103 | else |
---|
| 1104 | { |
---|
| 1105 | for (int i = 0; i < this->enabledFiles.size(); ++i) |
---|
| 1106 | enabledFiles[i]->setContextClient(client); |
---|
| 1107 | } |
---|
| 1108 | } |
---|
| 1109 | |
---|
| 1110 | |
---|
| 1111 | |
---|
[1232] | 1112 | /*! |
---|
| 1113 | Find all files in write mode |
---|
| 1114 | */ |
---|
| 1115 | void CContext::findEnabledWriteModeFiles(void) |
---|
| 1116 | { |
---|
| 1117 | int size = this->enabledFiles.size(); |
---|
| 1118 | for (int i = 0; i < size; ++i) |
---|
| 1119 | { |
---|
| 1120 | if (enabledFiles[i]->mode.isEmpty() || |
---|
| 1121 | (!enabledFiles[i]->mode.isEmpty() && enabledFiles[i]->mode.getValue() == CFile::mode_attr::write )) |
---|
| 1122 | enabledWriteModeFiles.push_back(enabledFiles[i]); |
---|
| 1123 | } |
---|
| 1124 | } |
---|
| 1125 | |
---|
| 1126 | /*! |
---|
| 1127 | Find all files in read mode |
---|
| 1128 | */ |
---|
[598] | 1129 | void CContext::findEnabledReadModeFiles(void) |
---|
| 1130 | { |
---|
| 1131 | int size = this->enabledFiles.size(); |
---|
| 1132 | for (int i = 0; i < size; ++i) |
---|
| 1133 | { |
---|
| 1134 | if (!enabledFiles[i]->mode.isEmpty() && enabledFiles[i]->mode.getValue() == CFile::mode_attr::read) |
---|
| 1135 | enabledReadModeFiles.push_back(enabledFiles[i]); |
---|
| 1136 | } |
---|
| 1137 | } |
---|
| 1138 | |
---|
[300] | 1139 | void CContext::closeAllFile(void) |
---|
| 1140 | { |
---|
[347] | 1141 | std::vector<CFile*>::const_iterator |
---|
[300] | 1142 | it = this->enabledFiles.begin(), end = this->enabledFiles.end(); |
---|
[509] | 1143 | |
---|
[300] | 1144 | for (; it != end; it++) |
---|
| 1145 | { |
---|
| 1146 | info(30)<<"Closing File : "<<(*it)->getId()<<endl; |
---|
| 1147 | (*it)->close(); |
---|
| 1148 | } |
---|
| 1149 | } |
---|
[509] | 1150 | |
---|
| 1151 | /*! |
---|
| 1152 | \brief Dispatch event received from client |
---|
| 1153 | Whenever a message is received in buffer of server, it will be processed depending on |
---|
| 1154 | its event type. A new event type should be added in the switch list to make sure |
---|
| 1155 | it processed on server side. |
---|
| 1156 | \param [in] event: Received message |
---|
| 1157 | */ |
---|
[300] | 1158 | bool CContext::dispatchEvent(CEventServer& event) |
---|
| 1159 | { |
---|
[509] | 1160 | |
---|
[549] | 1161 | if (SuperClass::dispatchEvent(event)) return true; |
---|
[300] | 1162 | else |
---|
| 1163 | { |
---|
| 1164 | switch(event.type) |
---|
| 1165 | { |
---|
| 1166 | case EVENT_ID_CLOSE_DEFINITION : |
---|
[549] | 1167 | recvCloseDefinition(event); |
---|
| 1168 | return true; |
---|
| 1169 | break; |
---|
[584] | 1170 | case EVENT_ID_UPDATE_CALENDAR: |
---|
[549] | 1171 | recvUpdateCalendar(event); |
---|
| 1172 | return true; |
---|
| 1173 | break; |
---|
[300] | 1174 | case EVENT_ID_CREATE_FILE_HEADER : |
---|
[549] | 1175 | recvCreateFileHeader(event); |
---|
| 1176 | return true; |
---|
| 1177 | break; |
---|
[509] | 1178 | case EVENT_ID_POST_PROCESS: |
---|
[549] | 1179 | recvPostProcessing(event); |
---|
| 1180 | return true; |
---|
[697] | 1181 | case EVENT_ID_SEND_REGISTRY: |
---|
| 1182 | recvRegistry(event); |
---|
| 1183 | return true; |
---|
[1025] | 1184 | break; |
---|
| 1185 | case EVENT_ID_POST_PROCESS_GLOBAL_ATTRIBUTES: |
---|
| 1186 | recvPostProcessingGlobalAttributes(event); |
---|
| 1187 | return true; |
---|
| 1188 | break; |
---|
| 1189 | case EVENT_ID_PROCESS_GRID_ENABLED_FIELDS: |
---|
| 1190 | recvProcessingGridOfEnabledFields(event); |
---|
| 1191 | return true; |
---|
| 1192 | break; |
---|
[300] | 1193 | default : |
---|
| 1194 | ERROR("bool CContext::dispatchEvent(CEventServer& event)", |
---|
[549] | 1195 | <<"Unknown Event"); |
---|
| 1196 | return false; |
---|
[300] | 1197 | } |
---|
| 1198 | } |
---|
| 1199 | } |
---|
[509] | 1200 | |
---|
| 1201 | //! Client side: Send a message to server to make it close |
---|
[300] | 1202 | void CContext::sendCloseDefinition(void) |
---|
| 1203 | { |
---|
[987] | 1204 | // Use correct context client to send message |
---|
[1030] | 1205 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1009] | 1206 | for (int i = 0; i < nbSrvPools; ++i) |
---|
[300] | 1207 | { |
---|
[1009] | 1208 | CContextClient* contextClientTmp = (hasServer) ? clientPrimServer[i] : client; |
---|
| 1209 | CEventClient event(getType(),EVENT_ID_CLOSE_DEFINITION); |
---|
| 1210 | if (contextClientTmp->isServerLeader()) |
---|
| 1211 | { |
---|
| 1212 | CMessage msg; |
---|
| 1213 | if (hasServer) |
---|
| 1214 | msg<<this->getIdServer(i); |
---|
| 1215 | else |
---|
| 1216 | msg<<this->getIdServer(); |
---|
| 1217 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 1218 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 1219 | event.push(*itRank,1,msg); |
---|
| 1220 | contextClientTmp->sendEvent(event); |
---|
| 1221 | } |
---|
| 1222 | else contextClientTmp->sendEvent(event); |
---|
[300] | 1223 | } |
---|
| 1224 | } |
---|
[509] | 1225 | |
---|
| 1226 | //! Server side: Receive a message of client announcing a context close |
---|
[300] | 1227 | void CContext::recvCloseDefinition(CEventServer& event) |
---|
| 1228 | { |
---|
| 1229 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1230 | string id; |
---|
[549] | 1231 | *buffer>>id; |
---|
[509] | 1232 | get(id)->closeDefinition(); |
---|
[300] | 1233 | } |
---|
[509] | 1234 | |
---|
| 1235 | //! Client side: Send a message to update calendar in each time step |
---|
[300] | 1236 | void CContext::sendUpdateCalendar(int step) |
---|
| 1237 | { |
---|
[987] | 1238 | // Use correct context client to send message |
---|
[1030] | 1239 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1009] | 1240 | for (int i = 0; i < nbSrvPools; ++i) |
---|
| 1241 | { |
---|
| 1242 | CContextClient* contextClientTmp = (hasServer) ? clientPrimServer[i] : client; |
---|
| 1243 | CEventClient event(getType(),EVENT_ID_UPDATE_CALENDAR); |
---|
[987] | 1244 | |
---|
[1009] | 1245 | if (contextClientTmp->isServerLeader()) |
---|
| 1246 | { |
---|
| 1247 | CMessage msg; |
---|
| 1248 | if (hasServer) |
---|
| 1249 | msg<<this->getIdServer(i)<<step; |
---|
| 1250 | else |
---|
| 1251 | msg<<this->getIdServer()<<step; |
---|
| 1252 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 1253 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 1254 | event.push(*itRank,1,msg); |
---|
| 1255 | contextClientTmp->sendEvent(event); |
---|
| 1256 | } |
---|
| 1257 | else contextClientTmp->sendEvent(event); |
---|
| 1258 | } |
---|
[300] | 1259 | } |
---|
[509] | 1260 | |
---|
| 1261 | //! Server side: Receive a message of client annoucing calendar update |
---|
[300] | 1262 | void CContext::recvUpdateCalendar(CEventServer& event) |
---|
| 1263 | { |
---|
| 1264 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1265 | string id; |
---|
[549] | 1266 | *buffer>>id; |
---|
| 1267 | get(id)->recvUpdateCalendar(*buffer); |
---|
[300] | 1268 | } |
---|
[509] | 1269 | |
---|
| 1270 | //! Server side: Receive a message of client annoucing calendar update |
---|
[300] | 1271 | void CContext::recvUpdateCalendar(CBufferIn& buffer) |
---|
| 1272 | { |
---|
[549] | 1273 | int step; |
---|
| 1274 | buffer>>step; |
---|
| 1275 | updateCalendar(step); |
---|
[987] | 1276 | if (hasClient && hasServer) |
---|
| 1277 | { |
---|
| 1278 | sendUpdateCalendar(step); |
---|
| 1279 | } |
---|
[300] | 1280 | } |
---|
[509] | 1281 | |
---|
| 1282 | //! Client side: Send a message to create header part of netcdf file |
---|
[300] | 1283 | void CContext::sendCreateFileHeader(void) |
---|
| 1284 | { |
---|
[987] | 1285 | // Use correct context client to send message |
---|
[1030] | 1286 | // int nbSrvPools = (hasServer) ? clientPrimServer.size() : 1; |
---|
| 1287 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1009] | 1288 | for (int i = 0; i < nbSrvPools; ++i) |
---|
| 1289 | { |
---|
| 1290 | CContextClient* contextClientTmp = (hasServer) ? clientPrimServer[i] : client; |
---|
| 1291 | CEventClient event(getType(),EVENT_ID_CREATE_FILE_HEADER); |
---|
[983] | 1292 | |
---|
[1009] | 1293 | if (contextClientTmp->isServerLeader()) |
---|
| 1294 | { |
---|
| 1295 | CMessage msg; |
---|
| 1296 | if (hasServer) |
---|
| 1297 | msg<<this->getIdServer(i); |
---|
| 1298 | else |
---|
| 1299 | msg<<this->getIdServer(); |
---|
| 1300 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 1301 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 1302 | event.push(*itRank,1,msg) ; |
---|
| 1303 | contextClientTmp->sendEvent(event); |
---|
| 1304 | } |
---|
| 1305 | else contextClientTmp->sendEvent(event); |
---|
[300] | 1306 | } |
---|
| 1307 | } |
---|
[509] | 1308 | |
---|
| 1309 | //! Server side: Receive a message of client annoucing the creation of header part of netcdf file |
---|
[300] | 1310 | void CContext::recvCreateFileHeader(CEventServer& event) |
---|
| 1311 | { |
---|
| 1312 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1313 | string id; |
---|
[549] | 1314 | *buffer>>id; |
---|
| 1315 | get(id)->recvCreateFileHeader(*buffer); |
---|
[300] | 1316 | } |
---|
[509] | 1317 | |
---|
| 1318 | //! Server side: Receive a message of client annoucing the creation of header part of netcdf file |
---|
[300] | 1319 | void CContext::recvCreateFileHeader(CBufferIn& buffer) |
---|
| 1320 | { |
---|
[987] | 1321 | if (!hasClient && hasServer) |
---|
| 1322 | createFileHeader(); |
---|
[300] | 1323 | } |
---|
[509] | 1324 | |
---|
| 1325 | //! Client side: Send a message to do some post processing on server |
---|
[1025] | 1326 | void CContext::sendProcessingGridOfEnabledFields() |
---|
| 1327 | { |
---|
| 1328 | // Use correct context client to send message |
---|
[1030] | 1329 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1027] | 1330 | for (int i = 0; i < nbSrvPools; ++i) |
---|
| 1331 | { |
---|
| 1332 | CContextClient* contextClientTmp = (0 != clientPrimServer.size()) ? clientPrimServer[i] : client; |
---|
| 1333 | CEventClient event(getType(),EVENT_ID_PROCESS_GRID_ENABLED_FIELDS); |
---|
[1025] | 1334 | |
---|
[1027] | 1335 | if (contextClientTmp->isServerLeader()) |
---|
| 1336 | { |
---|
| 1337 | CMessage msg; |
---|
[1099] | 1338 | if (hasServer) |
---|
| 1339 | msg<<this->getIdServer(i); |
---|
| 1340 | else |
---|
| 1341 | msg<<this->getIdServer(); |
---|
[1027] | 1342 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 1343 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 1344 | event.push(*itRank,1,msg); |
---|
| 1345 | contextClientTmp->sendEvent(event); |
---|
| 1346 | } |
---|
| 1347 | else contextClientTmp->sendEvent(event); |
---|
[1025] | 1348 | } |
---|
| 1349 | } |
---|
| 1350 | |
---|
| 1351 | //! Server side: Receive a message to do some post processing |
---|
| 1352 | void CContext::recvProcessingGridOfEnabledFields(CEventServer& event) |
---|
| 1353 | { |
---|
| 1354 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1355 | string id; |
---|
[1144] | 1356 | *buffer>>id; |
---|
[1025] | 1357 | } |
---|
| 1358 | |
---|
| 1359 | //! Client side: Send a message to do some post processing on server |
---|
[509] | 1360 | void CContext::sendPostProcessing() |
---|
| 1361 | { |
---|
[987] | 1362 | // Use correct context client to send message |
---|
[1030] | 1363 | // int nbSrvPools = (hasServer) ? clientPrimServer.size() : 1; |
---|
| 1364 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1009] | 1365 | for (int i = 0; i < nbSrvPools; ++i) |
---|
[509] | 1366 | { |
---|
[1009] | 1367 | CContextClient* contextClientTmp = (hasServer) ? clientPrimServer[i] : client; |
---|
| 1368 | CEventClient event(getType(),EVENT_ID_POST_PROCESS); |
---|
| 1369 | if (contextClientTmp->isServerLeader()) |
---|
| 1370 | { |
---|
| 1371 | CMessage msg; |
---|
| 1372 | if (hasServer) |
---|
| 1373 | msg<<this->getIdServer(i); |
---|
| 1374 | else |
---|
| 1375 | msg<<this->getIdServer(); |
---|
| 1376 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
| 1377 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
[987] | 1378 | event.push(*itRank,1,msg); |
---|
[1009] | 1379 | contextClientTmp->sendEvent(event); |
---|
| 1380 | } |
---|
| 1381 | else contextClientTmp->sendEvent(event); |
---|
[509] | 1382 | } |
---|
| 1383 | } |
---|
| 1384 | |
---|
| 1385 | //! Server side: Receive a message to do some post processing |
---|
| 1386 | void CContext::recvPostProcessing(CEventServer& event) |
---|
| 1387 | { |
---|
| 1388 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1389 | string id; |
---|
| 1390 | *buffer>>id; |
---|
| 1391 | get(id)->recvPostProcessing(*buffer); |
---|
| 1392 | } |
---|
| 1393 | |
---|
| 1394 | //! Server side: Receive a message to do some post processing |
---|
| 1395 | void CContext::recvPostProcessing(CBufferIn& buffer) |
---|
| 1396 | { |
---|
[549] | 1397 | CCalendarWrapper::get(CCalendarWrapper::GetDefName())->createCalendar(); |
---|
[509] | 1398 | postProcessing(); |
---|
| 1399 | } |
---|
| 1400 | |
---|
[511] | 1401 | const StdString& CContext::getIdServer() |
---|
| 1402 | { |
---|
| 1403 | if (hasClient) |
---|
| 1404 | { |
---|
| 1405 | idServer_ = this->getId(); |
---|
| 1406 | idServer_ += "_server"; |
---|
| 1407 | return idServer_; |
---|
| 1408 | } |
---|
| 1409 | if (hasServer) return (this->getId()); |
---|
| 1410 | } |
---|
| 1411 | |
---|
[1009] | 1412 | const StdString& CContext::getIdServer(const int i) |
---|
| 1413 | { |
---|
| 1414 | idServer_ = this->getId(); |
---|
| 1415 | idServer_ += "_server_"; |
---|
| 1416 | idServer_ += boost::lexical_cast<string>(i); |
---|
| 1417 | return idServer_; |
---|
| 1418 | } |
---|
| 1419 | |
---|
| 1420 | |
---|
[509] | 1421 | /*! |
---|
| 1422 | \brief Do some simple post processings after parsing xml file |
---|
| 1423 | After the xml file (iodef.xml) is parsed, it is necessary to build all relations among |
---|
| 1424 | created object, e.g: inhertance among fields, domain, axis. After that, all fiels as well as their parents (reference fields), |
---|
| 1425 | which will be written out into netcdf files, are processed |
---|
| 1426 | */ |
---|
| 1427 | void CContext::postProcessing() |
---|
| 1428 | { |
---|
| 1429 | if (isPostProcessed) return; |
---|
| 1430 | |
---|
[549] | 1431 | // Make sure the calendar was correctly created |
---|
| 1432 | if (!calendar) |
---|
| 1433 | ERROR("CContext::postProcessing()", << "A calendar must be defined for the context \"" << getId() << "!\"") |
---|
| 1434 | else if (calendar->getTimeStep() == NoneDu) |
---|
| 1435 | ERROR("CContext::postProcessing()", << "A timestep must be defined for the context \"" << getId() << "!\"") |
---|
[550] | 1436 | // Calendar first update to set the current date equals to the start date |
---|
| 1437 | calendar->update(0); |
---|
[509] | 1438 | |
---|
| 1439 | // Find all inheritance in xml structure |
---|
| 1440 | this->solveAllInheritance(); |
---|
| 1441 | |
---|
[992] | 1442 | // ShowTree(info(10)); |
---|
[983] | 1443 | |
---|
[676] | 1444 | // Check if some axis, domains or grids are eligible to for compressed indexed output. |
---|
| 1445 | // Warning: This must be done after solving the inheritance and before the rest of post-processing |
---|
[1025] | 1446 | checkAxisDomainsGridsEligibilityForCompressedOutput(); |
---|
[676] | 1447 | |
---|
[711] | 1448 | // Check if some automatic time series should be generated |
---|
[1144] | 1449 | // Warning: This must be done after solving the inheritance and before the rest of post-processing |
---|
[711] | 1450 | |
---|
[1025] | 1451 | // The timeseries should only be prepared in client |
---|
| 1452 | if (hasClient && !hasServer) prepareTimeseries(); |
---|
| 1453 | |
---|
[509] | 1454 | //Initialisation du vecteur 'enabledFiles' contenant la liste des fichiers à sortir. |
---|
[1232] | 1455 | findEnabledFiles(); |
---|
| 1456 | findEnabledWriteModeFiles(); |
---|
| 1457 | findEnabledReadModeFiles(); |
---|
| 1458 | |
---|
[1025] | 1459 | // For now, only read files with client and only one level server |
---|
[1232] | 1460 | // if (hasClient && !hasServer) findEnabledReadModeFiles(); |
---|
[509] | 1461 | |
---|
[1232] | 1462 | // Find all enabled fields of each file |
---|
| 1463 | findAllEnabledFieldsInFiles(this->enabledWriteModeFiles); |
---|
| 1464 | findAllEnabledFieldsInFiles(this->enabledReadModeFiles); |
---|
| 1465 | |
---|
[1025] | 1466 | // For now, only read files with client and only one level server |
---|
[1232] | 1467 | // if (hasClient && !hasServer) |
---|
| 1468 | // findAllEnabledFieldsInFiles(this->enabledReadModeFiles); |
---|
[509] | 1469 | |
---|
[1144] | 1470 | if (hasClient && !hasServer) |
---|
| 1471 | { |
---|
[1232] | 1472 | initReadFiles(); |
---|
| 1473 | // Try to read attributes of fields in file then fill in corresponding grid (or domain, axis) |
---|
| 1474 | this->readAttributesOfEnabledFieldsInReadModeFiles(); |
---|
[1144] | 1475 | } |
---|
| 1476 | |
---|
[823] | 1477 | // Only search and rebuild all reference objects of enable fields, don't transform |
---|
[1099] | 1478 | this->solveOnlyRefOfEnabledFields(false); |
---|
[823] | 1479 | |
---|
[1099] | 1480 | // Search and rebuild all reference object of enabled fields, and transform |
---|
[1129] | 1481 | this->solveAllRefOfEnabledFieldsAndTransform(false); |
---|
[1099] | 1482 | |
---|
[593] | 1483 | // Find all fields with read access from the public API |
---|
[1025] | 1484 | if (hasClient && !hasServer) findFieldsWithReadAccess(); |
---|
[593] | 1485 | // and solve the all reference for them |
---|
[1025] | 1486 | if (hasClient && !hasServer) solveAllRefOfFieldsWithReadAccess(); |
---|
[593] | 1487 | |
---|
[509] | 1488 | isPostProcessed = true; |
---|
| 1489 | } |
---|
| 1490 | |
---|
[917] | 1491 | /*! |
---|
| 1492 | * Compute the required buffer size to send the attributes (mostly those grid related). |
---|
| 1493 | * \param maxEventSize [in/out] the size of the bigger event for each connected server |
---|
[1330] | 1494 | * \param [in] contextClient |
---|
| 1495 | * \param [in] bufferForWriting True if buffers are used for sending data for writing |
---|
| 1496 | This flag is only true for client and server-1 for communication with server-2 |
---|
[917] | 1497 | */ |
---|
[1330] | 1498 | std::map<int, StdSize> CContext::getAttributesBufferSize(std::map<int, StdSize>& maxEventSize, |
---|
| 1499 | CContextClient* contextClient, bool bufferForWriting /*= "false"*/) |
---|
[509] | 1500 | { |
---|
[1372] | 1501 | // As calendar attributes are sent even if there are no active files or fields, maps are initialized according the size of calendar attributes |
---|
| 1502 | std::map<int, StdSize> attributesSize = CCalendarWrapper::get(CCalendarWrapper::GetDefName())->getMinimumBufferSizeForAttributes(contextClient); |
---|
| 1503 | maxEventSize = CCalendarWrapper::get(CCalendarWrapper::GetDefName())->getMinimumBufferSizeForAttributes(contextClient); |
---|
[731] | 1504 | |
---|
[1370] | 1505 | std::vector<CFile*>& fileList = this->enabledFiles; |
---|
| 1506 | size_t numEnabledFiles = fileList.size(); |
---|
| 1507 | for (size_t i = 0; i < numEnabledFiles; ++i) |
---|
[731] | 1508 | { |
---|
[1370] | 1509 | // CFile* file = this->enabledWriteModeFiles[i]; |
---|
| 1510 | CFile* file = fileList[i]; |
---|
| 1511 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
| 1512 | size_t numEnabledFields = enabledFields.size(); |
---|
| 1513 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
| 1514 | { |
---|
| 1515 | const std::map<int, StdSize> mapSize = enabledFields[j]->getGridAttributesBufferSize(contextClient, bufferForWriting); |
---|
| 1516 | std::map<int, StdSize>::const_iterator it = mapSize.begin(), itE = mapSize.end(); |
---|
| 1517 | for (; it != itE; ++it) |
---|
| 1518 | { |
---|
| 1519 | // If attributesSize[it->first] does not exist, it will be zero-initialized |
---|
| 1520 | // so we can use it safely without checking for its existence |
---|
| 1521 | if (attributesSize[it->first] < it->second) |
---|
| 1522 | attributesSize[it->first] = it->second; |
---|
[917] | 1523 | |
---|
[1370] | 1524 | if (maxEventSize[it->first] < it->second) |
---|
| 1525 | maxEventSize[it->first] = it->second; |
---|
| 1526 | } |
---|
| 1527 | } |
---|
[731] | 1528 | } |
---|
| 1529 | return attributesSize; |
---|
| 1530 | } |
---|
| 1531 | |
---|
[917] | 1532 | /*! |
---|
| 1533 | * Compute the required buffer size to send the fields data. |
---|
| 1534 | * \param maxEventSize [in/out] the size of the bigger event for each connected server |
---|
[1330] | 1535 | * \param [in] contextClient |
---|
| 1536 | * \param [in] bufferForWriting True if buffers are used for sending data for writing |
---|
| 1537 | This flag is only true for client and server-1 for communication with server-2 |
---|
[917] | 1538 | */ |
---|
[1330] | 1539 | std::map<int, StdSize> CContext::getDataBufferSize(std::map<int, StdSize>& maxEventSize, |
---|
| 1540 | CContextClient* contextClient, bool bufferForWriting /*= "false"*/) |
---|
[731] | 1541 | { |
---|
[730] | 1542 | std::map<int, StdSize> dataSize; |
---|
[509] | 1543 | |
---|
| 1544 | // Find all reference domain and axis of all active fields |
---|
[1330] | 1545 | std::vector<CFile*>& fileList = bufferForWriting ? this->enabledWriteModeFiles : this->enabledReadModeFiles; |
---|
| 1546 | size_t numEnabledFiles = fileList.size(); |
---|
[730] | 1547 | for (size_t i = 0; i < numEnabledFiles; ++i) |
---|
[509] | 1548 | { |
---|
[1330] | 1549 | // CFile* file = this->enabledFiles[i]; |
---|
| 1550 | CFile* file = fileList[i]; |
---|
[1193] | 1551 | if (file->getContextClient() == contextClient) |
---|
[1184] | 1552 | { |
---|
[1370] | 1553 | std::vector<CField*> enabledFields = file->getEnabledFields(); |
---|
| 1554 | size_t numEnabledFields = enabledFields.size(); |
---|
| 1555 | for (size_t j = 0; j < numEnabledFields; ++j) |
---|
[509] | 1556 | { |
---|
[1370] | 1557 | // const std::vector<std::map<int, StdSize> > mapSize = enabledFields[j]->getGridDataBufferSize(contextClient); |
---|
| 1558 | const std::map<int, StdSize> mapSize = enabledFields[j]->getGridDataBufferSize(contextClient,bufferForWriting); |
---|
| 1559 | std::map<int, StdSize>::const_iterator it = mapSize.begin(), itE = mapSize.end(); |
---|
| 1560 | for (; it != itE; ++it) |
---|
[509] | 1561 | { |
---|
[1370] | 1562 | // If dataSize[it->first] does not exist, it will be zero-initialized |
---|
| 1563 | // so we can use it safely without checking for its existance |
---|
| 1564 | if (CXios::isOptPerformance) |
---|
| 1565 | dataSize[it->first] += it->second; |
---|
| 1566 | else if (dataSize[it->first] < it->second) |
---|
| 1567 | dataSize[it->first] = it->second; |
---|
[917] | 1568 | |
---|
[1370] | 1569 | if (maxEventSize[it->first] < it->second) |
---|
| 1570 | maxEventSize[it->first] = it->second; |
---|
[598] | 1571 | } |
---|
[509] | 1572 | } |
---|
| 1573 | } |
---|
| 1574 | } |
---|
[730] | 1575 | return dataSize; |
---|
[509] | 1576 | } |
---|
| 1577 | |
---|
| 1578 | //! Client side: Send infomation of active files (files are enabled to write out) |
---|
[1232] | 1579 | void CContext::sendEnabledFiles(const std::vector<CFile*>& activeFiles) |
---|
[509] | 1580 | { |
---|
[1232] | 1581 | int size = activeFiles.size(); |
---|
[509] | 1582 | |
---|
| 1583 | // In a context, each type has a root definition, e.g: axis, domain, field. |
---|
| 1584 | // Every object must be a child of one of these root definition. In this case |
---|
| 1585 | // all new file objects created on server must be children of the root "file_definition" |
---|
| 1586 | StdString fileDefRoot("file_definition"); |
---|
| 1587 | CFileGroup* cfgrpPtr = CFileGroup::get(fileDefRoot); |
---|
[1158] | 1588 | |
---|
[509] | 1589 | for (int i = 0; i < size; ++i) |
---|
| 1590 | { |
---|
[1232] | 1591 | CFile* f = activeFiles[i]; |
---|
| 1592 | cfgrpPtr->sendCreateChild(f->getId(),f->getContextClient()); |
---|
| 1593 | f->sendAllAttributesToServer(f->getContextClient()); |
---|
| 1594 | f->sendAddAllVariables(f->getContextClient()); |
---|
[509] | 1595 | } |
---|
| 1596 | } |
---|
| 1597 | |
---|
| 1598 | //! Client side: Send information of active fields (ones are written onto files) |
---|
[1232] | 1599 | void CContext::sendEnabledFieldsInFiles(const std::vector<CFile*>& activeFiles) |
---|
[509] | 1600 | { |
---|
[1232] | 1601 | int size = activeFiles.size(); |
---|
[509] | 1602 | for (int i = 0; i < size; ++i) |
---|
| 1603 | { |
---|
[1232] | 1604 | activeFiles[i]->sendEnabledFields(activeFiles[i]->getContextClient()); |
---|
[509] | 1605 | } |
---|
| 1606 | } |
---|
| 1607 | |
---|
[676] | 1608 | //! Client side: Check if the defined axis, domains and grids are eligible for compressed indexed output |
---|
| 1609 | void CContext::checkAxisDomainsGridsEligibilityForCompressedOutput() |
---|
| 1610 | { |
---|
| 1611 | if (!hasClient) return; |
---|
| 1612 | |
---|
| 1613 | const vector<CAxis*> allAxis = CAxis::getAll(); |
---|
| 1614 | for (vector<CAxis*>::const_iterator it = allAxis.begin(); it != allAxis.end(); it++) |
---|
| 1615 | (*it)->checkEligibilityForCompressedOutput(); |
---|
| 1616 | |
---|
| 1617 | const vector<CDomain*> allDomains = CDomain::getAll(); |
---|
| 1618 | for (vector<CDomain*>::const_iterator it = allDomains.begin(); it != allDomains.end(); it++) |
---|
| 1619 | (*it)->checkEligibilityForCompressedOutput(); |
---|
| 1620 | |
---|
| 1621 | const vector<CGrid*> allGrids = CGrid::getAll(); |
---|
| 1622 | for (vector<CGrid*>::const_iterator it = allGrids.begin(); it != allGrids.end(); it++) |
---|
| 1623 | (*it)->checkEligibilityForCompressedOutput(); |
---|
| 1624 | } |
---|
| 1625 | |
---|
[711] | 1626 | //! Client side: Prepare the timeseries by adding the necessary files |
---|
| 1627 | void CContext::prepareTimeseries() |
---|
| 1628 | { |
---|
| 1629 | if (!hasClient) return; |
---|
| 1630 | |
---|
| 1631 | const std::vector<CFile*> allFiles = CFile::getAll(); |
---|
| 1632 | for (size_t i = 0; i < allFiles.size(); i++) |
---|
| 1633 | { |
---|
| 1634 | CFile* file = allFiles[i]; |
---|
| 1635 | |
---|
[1158] | 1636 | std::vector<CVariable*> fileVars, fieldVars, vars = file->getAllVariables(); |
---|
| 1637 | for (size_t k = 0; k < vars.size(); k++) |
---|
| 1638 | { |
---|
| 1639 | CVariable* var = vars[k]; |
---|
| 1640 | |
---|
| 1641 | if (var->ts_target.isEmpty() |
---|
| 1642 | || var->ts_target == CVariable::ts_target_attr::file || var->ts_target == CVariable::ts_target_attr::both) |
---|
| 1643 | fileVars.push_back(var); |
---|
| 1644 | |
---|
| 1645 | if (!var->ts_target.isEmpty() |
---|
| 1646 | && (var->ts_target == CVariable::ts_target_attr::field || var->ts_target == CVariable::ts_target_attr::both)) |
---|
| 1647 | fieldVars.push_back(var); |
---|
| 1648 | } |
---|
| 1649 | |
---|
[711] | 1650 | if (!file->timeseries.isEmpty() && file->timeseries != CFile::timeseries_attr::none) |
---|
| 1651 | { |
---|
[1158] | 1652 | StdString fileNameStr("%file_name%") ; |
---|
| 1653 | StdString tsPrefix = !file->ts_prefix.isEmpty() ? file->ts_prefix : fileNameStr ; |
---|
| 1654 | |
---|
| 1655 | StdString fileName=file->getFileOutputName(); |
---|
| 1656 | size_t pos=tsPrefix.find(fileNameStr) ; |
---|
| 1657 | while (pos!=std::string::npos) |
---|
| 1658 | { |
---|
| 1659 | tsPrefix=tsPrefix.replace(pos,fileNameStr.size(),fileName) ; |
---|
| 1660 | pos=tsPrefix.find(fileNameStr) ; |
---|
| 1661 | } |
---|
| 1662 | |
---|
[711] | 1663 | const std::vector<CField*> allFields = file->getAllFields(); |
---|
| 1664 | for (size_t j = 0; j < allFields.size(); j++) |
---|
| 1665 | { |
---|
| 1666 | CField* field = allFields[j]; |
---|
| 1667 | |
---|
| 1668 | if (!field->ts_enabled.isEmpty() && field->ts_enabled) |
---|
| 1669 | { |
---|
| 1670 | CFile* tsFile = CFile::create(); |
---|
| 1671 | tsFile->duplicateAttributes(file); |
---|
| 1672 | |
---|
[1158] | 1673 | // Add variables originating from file and targeted to timeserie file |
---|
| 1674 | for (size_t k = 0; k < fileVars.size(); k++) |
---|
| 1675 | tsFile->getVirtualVariableGroup()->addChild(fileVars[k]); |
---|
| 1676 | |
---|
| 1677 | |
---|
[711] | 1678 | tsFile->name = tsPrefix + "_"; |
---|
| 1679 | if (!field->name.isEmpty()) |
---|
| 1680 | tsFile->name.get() += field->name; |
---|
| 1681 | else if (field->hasDirectFieldReference()) // We cannot use getBaseFieldReference() just yet |
---|
| 1682 | tsFile->name.get() += field->field_ref; |
---|
| 1683 | else |
---|
| 1684 | tsFile->name.get() += field->getId(); |
---|
| 1685 | |
---|
| 1686 | if (!field->ts_split_freq.isEmpty()) |
---|
| 1687 | tsFile->split_freq = field->ts_split_freq; |
---|
| 1688 | |
---|
| 1689 | CField* tsField = tsFile->addField(); |
---|
| 1690 | tsField->field_ref = field->getId(); |
---|
| 1691 | |
---|
[1158] | 1692 | // Add variables originating from file and targeted to timeserie field |
---|
| 1693 | for (size_t k = 0; k < fieldVars.size(); k++) |
---|
| 1694 | tsField->getVirtualVariableGroup()->addChild(fieldVars[k]); |
---|
| 1695 | |
---|
| 1696 | vars = field->getAllVariables(); |
---|
| 1697 | for (size_t k = 0; k < vars.size(); k++) |
---|
| 1698 | { |
---|
| 1699 | CVariable* var = vars[k]; |
---|
| 1700 | |
---|
| 1701 | // Add variables originating from field and targeted to timeserie field |
---|
| 1702 | if (var->ts_target.isEmpty() |
---|
| 1703 | || var->ts_target == CVariable::ts_target_attr::field || var->ts_target == CVariable::ts_target_attr::both) |
---|
| 1704 | tsField->getVirtualVariableGroup()->addChild(var); |
---|
| 1705 | |
---|
| 1706 | // Add variables originating from field and targeted to timeserie file |
---|
| 1707 | if (!var->ts_target.isEmpty() |
---|
| 1708 | && (var->ts_target == CVariable::ts_target_attr::file || var->ts_target == CVariable::ts_target_attr::both)) |
---|
| 1709 | tsFile->getVirtualVariableGroup()->addChild(var); |
---|
| 1710 | } |
---|
| 1711 | |
---|
[711] | 1712 | tsFile->solveFieldRefInheritance(true); |
---|
| 1713 | |
---|
| 1714 | if (file->timeseries == CFile::timeseries_attr::exclusive) |
---|
| 1715 | field->enabled = false; |
---|
| 1716 | } |
---|
| 1717 | } |
---|
| 1718 | |
---|
| 1719 | // Finally disable the original file is need be |
---|
| 1720 | if (file->timeseries == CFile::timeseries_attr::only) |
---|
| 1721 | file->enabled = false; |
---|
| 1722 | } |
---|
| 1723 | } |
---|
| 1724 | } |
---|
| 1725 | |
---|
[509] | 1726 | //! Client side: Send information of reference grid of active fields |
---|
[1232] | 1727 | void CContext::sendRefGrid(const std::vector<CFile*>& activeFiles) |
---|
[509] | 1728 | { |
---|
| 1729 | std::set<StdString> gridIds; |
---|
[1232] | 1730 | int sizeFile = activeFiles.size(); |
---|
[509] | 1731 | CFile* filePtr(NULL); |
---|
| 1732 | |
---|
| 1733 | // Firstly, find all reference grids of all active fields |
---|
| 1734 | for (int i = 0; i < sizeFile; ++i) |
---|
| 1735 | { |
---|
[1232] | 1736 | filePtr = activeFiles[i]; |
---|
[509] | 1737 | std::vector<CField*> enabledFields = filePtr->getEnabledFields(); |
---|
| 1738 | int sizeField = enabledFields.size(); |
---|
| 1739 | for (int numField = 0; numField < sizeField; ++numField) |
---|
| 1740 | { |
---|
| 1741 | if (0 != enabledFields[numField]->getRelGrid()) |
---|
| 1742 | gridIds.insert(CGrid::get(enabledFields[numField]->getRelGrid())->getId()); |
---|
| 1743 | } |
---|
| 1744 | } |
---|
| 1745 | |
---|
| 1746 | // Create all reference grids on server side |
---|
| 1747 | StdString gridDefRoot("grid_definition"); |
---|
| 1748 | CGridGroup* gridPtr = CGridGroup::get(gridDefRoot); |
---|
| 1749 | std::set<StdString>::const_iterator it, itE = gridIds.end(); |
---|
| 1750 | for (it = gridIds.begin(); it != itE; ++it) |
---|
| 1751 | { |
---|
| 1752 | gridPtr->sendCreateChild(*it); |
---|
| 1753 | CGrid::get(*it)->sendAllAttributesToServer(); |
---|
[540] | 1754 | CGrid::get(*it)->sendAllDomains(); |
---|
| 1755 | CGrid::get(*it)->sendAllAxis(); |
---|
[887] | 1756 | CGrid::get(*it)->sendAllScalars(); |
---|
[509] | 1757 | } |
---|
| 1758 | } |
---|
| 1759 | |
---|
[1232] | 1760 | //! Client side: Send information of reference domain, axis and scalar of active fields |
---|
| 1761 | void CContext::sendRefDomainsAxisScalars(const std::vector<CFile*>& activeFiles) |
---|
[569] | 1762 | { |
---|
[887] | 1763 | std::set<StdString> domainIds, axisIds, scalarIds; |
---|
[509] | 1764 | |
---|
[569] | 1765 | // Find all reference domain and axis of all active fields |
---|
[1232] | 1766 | int numEnabledFiles = activeFiles.size(); |
---|
[569] | 1767 | for (int i = 0; i < numEnabledFiles; ++i) |
---|
| 1768 | { |
---|
[1232] | 1769 | std::vector<CField*> enabledFields = activeFiles[i]->getEnabledFields(); |
---|
[569] | 1770 | int numEnabledFields = enabledFields.size(); |
---|
| 1771 | for (int j = 0; j < numEnabledFields; ++j) |
---|
| 1772 | { |
---|
[887] | 1773 | const std::vector<StdString>& prDomAxisScalarId = enabledFields[j]->getRefDomainAxisIds(); |
---|
| 1774 | if ("" != prDomAxisScalarId[0]) domainIds.insert(prDomAxisScalarId[0]); |
---|
| 1775 | if ("" != prDomAxisScalarId[1]) axisIds.insert(prDomAxisScalarId[1]); |
---|
| 1776 | if ("" != prDomAxisScalarId[2]) scalarIds.insert(prDomAxisScalarId[2]); |
---|
[569] | 1777 | } |
---|
| 1778 | } |
---|
| 1779 | |
---|
| 1780 | // Create all reference axis on server side |
---|
[887] | 1781 | std::set<StdString>::iterator itDom, itAxis, itScalar; |
---|
[569] | 1782 | std::set<StdString>::const_iterator itE; |
---|
| 1783 | |
---|
[887] | 1784 | StdString scalarDefRoot("scalar_definition"); |
---|
| 1785 | CScalarGroup* scalarPtr = CScalarGroup::get(scalarDefRoot); |
---|
| 1786 | itE = scalarIds.end(); |
---|
| 1787 | for (itScalar = scalarIds.begin(); itScalar != itE; ++itScalar) |
---|
| 1788 | { |
---|
| 1789 | if (!itScalar->empty()) |
---|
| 1790 | { |
---|
| 1791 | scalarPtr->sendCreateChild(*itScalar); |
---|
| 1792 | CScalar::get(*itScalar)->sendAllAttributesToServer(); |
---|
| 1793 | } |
---|
| 1794 | } |
---|
| 1795 | |
---|
[569] | 1796 | StdString axiDefRoot("axis_definition"); |
---|
| 1797 | CAxisGroup* axisPtr = CAxisGroup::get(axiDefRoot); |
---|
| 1798 | itE = axisIds.end(); |
---|
| 1799 | for (itAxis = axisIds.begin(); itAxis != itE; ++itAxis) |
---|
| 1800 | { |
---|
| 1801 | if (!itAxis->empty()) |
---|
| 1802 | { |
---|
| 1803 | axisPtr->sendCreateChild(*itAxis); |
---|
| 1804 | CAxis::get(*itAxis)->sendAllAttributesToServer(); |
---|
| 1805 | } |
---|
| 1806 | } |
---|
| 1807 | |
---|
| 1808 | // Create all reference domains on server side |
---|
| 1809 | StdString domDefRoot("domain_definition"); |
---|
| 1810 | CDomainGroup* domPtr = CDomainGroup::get(domDefRoot); |
---|
| 1811 | itE = domainIds.end(); |
---|
| 1812 | for (itDom = domainIds.begin(); itDom != itE; ++itDom) |
---|
| 1813 | { |
---|
| 1814 | if (!itDom->empty()) { |
---|
| 1815 | domPtr->sendCreateChild(*itDom); |
---|
| 1816 | CDomain::get(*itDom)->sendAllAttributesToServer(); |
---|
| 1817 | } |
---|
| 1818 | } |
---|
| 1819 | } |
---|
| 1820 | |
---|
[509] | 1821 | //! Update calendar in each time step |
---|
[300] | 1822 | void CContext::updateCalendar(int step) |
---|
| 1823 | { |
---|
[1357] | 1824 | int prevStep = calendar->getStep(); |
---|
| 1825 | |
---|
| 1826 | if (prevStep < step) |
---|
[639] | 1827 | { |
---|
[1358] | 1828 | if (hasClient && !hasServer) // For now we only use server level 1 to read data |
---|
| 1829 | { |
---|
| 1830 | doPreTimestepOperationsForEnabledReadModeFiles(); |
---|
| 1831 | } |
---|
| 1832 | |
---|
[1357] | 1833 | info(50) << "updateCalendar : before : " << calendar->getCurrentDate() << endl; |
---|
| 1834 | calendar->update(step); |
---|
| 1835 | info(50) << "updateCalendar : after : " << calendar->getCurrentDate() << endl; |
---|
| 1836 | #ifdef XIOS_MEMTRACK_LIGHT |
---|
| 1837 | info(50) << " Current memory used by XIOS : "<< MemTrack::getCurrentMemorySize()*1.0/(1024*1024)<<" Mbyte, at timestep "<<step<<" of context "<<this->getId()<<endl ; |
---|
| 1838 | #endif |
---|
| 1839 | |
---|
| 1840 | if (hasClient && !hasServer) // For now we only use server level 1 to read data |
---|
| 1841 | { |
---|
| 1842 | doPostTimestepOperationsForEnabledReadModeFiles(); |
---|
| 1843 | garbageCollector.invalidate(calendar->getCurrentDate()); |
---|
| 1844 | } |
---|
[639] | 1845 | } |
---|
[1357] | 1846 | else if (prevStep == step) |
---|
| 1847 | info(50) << "updateCalendar: already at step " << step << ", no operation done." << endl; |
---|
| 1848 | else // if (prevStep > step) |
---|
| 1849 | ERROR("void CContext::updateCalendar(int step)", |
---|
| 1850 | << "Illegal calendar update: previous step was " << prevStep << ", new step " << step << "is in the past!") |
---|
[300] | 1851 | } |
---|
[509] | 1852 | |
---|
[1232] | 1853 | void CContext::initReadFiles(void) |
---|
| 1854 | { |
---|
| 1855 | vector<CFile*>::const_iterator it; |
---|
| 1856 | |
---|
| 1857 | for (it=enabledReadModeFiles.begin(); it != enabledReadModeFiles.end(); it++) |
---|
| 1858 | { |
---|
| 1859 | (*it)->initRead(); |
---|
| 1860 | } |
---|
| 1861 | } |
---|
| 1862 | |
---|
[509] | 1863 | //! Server side: Create header of netcdf file |
---|
[1232] | 1864 | void CContext::createFileHeader(void) |
---|
[300] | 1865 | { |
---|
[549] | 1866 | vector<CFile*>::const_iterator it; |
---|
[509] | 1867 | |
---|
[300] | 1868 | for (it=enabledFiles.begin(); it != enabledFiles.end(); it++) |
---|
[1232] | 1869 | // for (it=enabledWriteModeFiles.begin(); it != enabledWriteModeFiles.end(); it++) |
---|
[300] | 1870 | { |
---|
[1232] | 1871 | (*it)->initWrite(); |
---|
[300] | 1872 | } |
---|
[509] | 1873 | } |
---|
| 1874 | |
---|
| 1875 | //! Get current context |
---|
[347] | 1876 | CContext* CContext::getCurrent(void) |
---|
[300] | 1877 | { |
---|
[549] | 1878 | return CObjectFactory::GetObject<CContext>(CObjectFactory::GetCurrentContextId()).get(); |
---|
[300] | 1879 | } |
---|
[509] | 1880 | |
---|
| 1881 | /*! |
---|
| 1882 | \brief Set context with an id be the current context |
---|
| 1883 | \param [in] id identity of context to be set to current |
---|
| 1884 | */ |
---|
[346] | 1885 | void CContext::setCurrent(const string& id) |
---|
| 1886 | { |
---|
| 1887 | CObjectFactory::SetCurrentContextId(id); |
---|
| 1888 | CGroupFactory::SetCurrentContextId(id); |
---|
| 1889 | } |
---|
[509] | 1890 | |
---|
| 1891 | /*! |
---|
| 1892 | \brief Create a context with specific id |
---|
| 1893 | \param [in] id identity of new context |
---|
| 1894 | \return pointer to the new context or already-existed one with identity id |
---|
| 1895 | */ |
---|
[347] | 1896 | CContext* CContext::create(const StdString& id) |
---|
[346] | 1897 | { |
---|
[549] | 1898 | CContext::setCurrent(id); |
---|
[509] | 1899 | |
---|
[346] | 1900 | bool hasctxt = CContext::has(id); |
---|
[347] | 1901 | CContext* context = CObjectFactory::CreateObject<CContext>(id).get(); |
---|
[549] | 1902 | getRoot(); |
---|
[347] | 1903 | if (!hasctxt) CGroupFactory::AddChild(root, context->getShared()); |
---|
[346] | 1904 | |
---|
| 1905 | #define DECLARE_NODE(Name_, name_) \ |
---|
| 1906 | C##Name_##Definition::create(C##Name_##Definition::GetDefName()); |
---|
| 1907 | #define DECLARE_NODE_PAR(Name_, name_) |
---|
| 1908 | #include "node_type.conf" |
---|
| 1909 | |
---|
| 1910 | return (context); |
---|
| 1911 | } |
---|
[697] | 1912 | |
---|
| 1913 | |
---|
| 1914 | //! Server side: Receive a message to do some post processing |
---|
| 1915 | void CContext::recvRegistry(CEventServer& event) |
---|
| 1916 | { |
---|
| 1917 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
| 1918 | string id; |
---|
| 1919 | *buffer>>id; |
---|
| 1920 | get(id)->recvRegistry(*buffer); |
---|
| 1921 | } |
---|
| 1922 | |
---|
| 1923 | void CContext::recvRegistry(CBufferIn& buffer) |
---|
| 1924 | { |
---|
| 1925 | if (server->intraCommRank==0) |
---|
| 1926 | { |
---|
| 1927 | CRegistry registry(server->intraComm) ; |
---|
| 1928 | registry.fromBuffer(buffer) ; |
---|
| 1929 | registryOut->mergeRegistry(registry) ; |
---|
| 1930 | } |
---|
| 1931 | } |
---|
| 1932 | |
---|
| 1933 | void CContext::sendRegistry(void) |
---|
[1158] | 1934 | { |
---|
[697] | 1935 | registryOut->hierarchicalGatherRegistry() ; |
---|
| 1936 | |
---|
[1009] | 1937 | // Use correct context client to send message |
---|
[1030] | 1938 | int nbSrvPools = (this->hasServer) ? (this->hasClient ? this->clientPrimServer.size() : 0) : 1; |
---|
[1009] | 1939 | for (int i = 0; i < nbSrvPools; ++i) |
---|
| 1940 | { |
---|
| 1941 | CContextClient* contextClientTmp = (hasServer) ? clientPrimServer[i] : client; |
---|
| 1942 | CEventClient event(CContext::GetType(), CContext::EVENT_ID_SEND_REGISTRY); |
---|
[1021] | 1943 | if (contextClientTmp->isServerLeader()) |
---|
[1009] | 1944 | { |
---|
| 1945 | CMessage msg ; |
---|
| 1946 | if (hasServer) |
---|
| 1947 | msg<<this->getIdServer(i); |
---|
| 1948 | else |
---|
| 1949 | msg<<this->getIdServer(); |
---|
| 1950 | if (contextClientTmp->clientRank==0) msg<<*registryOut ; |
---|
[1021] | 1951 | const std::list<int>& ranks = contextClientTmp->getRanksServerLeader(); |
---|
[1009] | 1952 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
| 1953 | event.push(*itRank,1,msg); |
---|
| 1954 | contextClientTmp->sendEvent(event); |
---|
| 1955 | } |
---|
| 1956 | else contextClientTmp->sendEvent(event); |
---|
| 1957 | } |
---|
[697] | 1958 | } |
---|
| 1959 | |
---|
[1130] | 1960 | /*! |
---|
| 1961 | * \fn bool CContext::isFinalized(void) |
---|
[1139] | 1962 | * Context is finalized if it received context post finalize event. |
---|
[1130] | 1963 | */ |
---|
[1054] | 1964 | bool CContext::isFinalized(void) |
---|
| 1965 | { |
---|
[1139] | 1966 | return finalized; |
---|
[1054] | 1967 | } |
---|
| 1968 | |
---|
[335] | 1969 | } // namespace xios |
---|