[222] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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[373] | 4 | # Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel |
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| 5 | # Contact: Arnaud.Caubel__at__lsce.ipsl.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[222] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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| 16 | # if you use the prefix #D- for comments to be extracted. |
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| 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Titane |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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| 24 | #D- This ksh library if a layer under some usefull |
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| 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[245] | 64 | # Host and user names |
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| 65 | # $hostname ou hostname |
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| 66 | typeset HOST=${HOST:=$( hostname )} |
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[222] | 67 | # $username ou whoami |
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[245] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[222] | 69 | # $hostname of the MASTER job |
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[544] | 70 | typeset MASTER=titane |
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[222] | 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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| 77 | # rsync with path |
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| 78 | typeset -r RSYNC=/usr/bin/rsync |
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| 79 | # RSYNC_opt args to rsync |
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| 80 | typeset -r RSYNC_opt="-va" |
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| 81 | # ie storage filesystem |
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[538] | 82 | typeset -r STOREHOST=${MASTER} |
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[222] | 83 | |
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| 84 | #==================================================== |
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[451] | 85 | # Source default environment |
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| 86 | #==================================================== |
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| 87 | . /etc/profile |
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| 88 | |
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| 89 | #==================================================== |
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[305] | 90 | # Set environment tools (ferret, nco, cdo) |
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| 91 | #==================================================== |
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[451] | 92 | . /home/cont003/p86ipsl/.atlas_env_titane_ksh |
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[222] | 93 | |
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[584] | 94 | module switch nco/3.9.4 nco/3.9.4_netcdf4 |
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[545] | 95 | |
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[222] | 96 | #==================================================== |
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| 97 | # Specific for ocean additionnal diagnostic |
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[451] | 98 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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| 99 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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[222] | 100 | |
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| 101 | #==================================================== |
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| 102 | # Host specific DIRECTORIES |
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| 103 | #==================================================== |
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| 104 | |
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[544] | 105 | # ============ CESIUM START ============ # |
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| 106 | |
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[222] | 107 | #==================================================== |
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| 108 | #- Mirror libIGCM from titane to cesium if needed |
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[544] | 109 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' ) |
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| 110 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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| 111 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 112 | #else |
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| 113 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 114 | #fi |
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[222] | 115 | |
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| 116 | #==================================================== |
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| 117 | #- libIGCM_POST |
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[544] | 118 | #if ( ${MirrorlibIGCM} ) ; then |
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| 119 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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| 120 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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| 121 | #else |
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| 122 | # typeset -r libIGCM_POST=${libIGCM} |
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| 123 | #fi |
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[222] | 124 | |
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[544] | 125 | # ============ CESIUM END ============ # |
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| 126 | |
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[222] | 127 | #==================================================== |
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[544] | 128 | #- MirrorlibIGCM for frontend |
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| 129 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 130 | |
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| 131 | #==================================================== |
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| 132 | #- libIGCM_POST for frontend |
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| 133 | typeset -r libIGCM_POST=${libIGCM} |
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| 134 | |
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| 135 | #==================================================== |
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[587] | 136 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 137 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 138 | |
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| 139 | #==================================================== |
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| 140 | #- SUBMIT_DIR : submission dir |
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| 141 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LS_SUBCWD}} |
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| 142 | |
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| 143 | #==================================================== |
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| 144 | #- ARCHIVE (dedicated to large files) |
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| 145 | typeset -r ARCHIVE=${CCCSTOREDIR} |
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| 146 | |
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| 147 | #- ARCHIVE (dedicated to small/medium files) |
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| 148 | typeset -r STORAGE=${CCCWORKDIR} |
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| 149 | |
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| 150 | #==================================================== |
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[222] | 151 | #- IN |
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[545] | 152 | typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM} |
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[438] | 153 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/dmnfs/cont003/p24data} |
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[222] | 154 | |
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| 155 | #==================================================== |
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[544] | 156 | #- R_OUT |
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[222] | 157 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 158 | |
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| 159 | #==================================================== |
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[587] | 160 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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| 161 | typeset -r R_FIG=${STORAGE}/IGCM_OUT |
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| 162 | |
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| 163 | #==================================================== |
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[544] | 164 | #- R_BUF (ONLY FOR double copy an scratch) |
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| 165 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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[222] | 166 | |
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| 167 | #==================================================== |
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[544] | 168 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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| 169 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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| 170 | |
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| 171 | #==================================================== |
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[222] | 172 | #- OUT_POST |
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| 173 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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| 174 | |
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| 175 | #==================================================== |
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| 176 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[459] | 177 | if [ ! X${LSB_QUEUE} = Xmono ] ; then |
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[544] | 178 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${LSB_JOBID}} |
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[459] | 179 | else |
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[544] | 180 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/TMPDIR_IGCM/${LSB_JOBID}} |
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[459] | 181 | fi |
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[222] | 182 | |
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| 183 | #==================================================== |
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| 184 | #- HOST_MPIRUN_COMMAND |
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| 185 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time mpirun"} |
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| 186 | |
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| 187 | #==================================================== |
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| 188 | #- Max number of arguments passed to nco operator or demigration command |
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| 189 | UNIX_MAX_LIMIT=360 |
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| 190 | |
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| 191 | #D-#================================================== |
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| 192 | #D-function IGCM_sys_RshMaster |
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[531] | 193 | #D-* Purpose: Connection to frontend machine. |
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[222] | 194 | #D-* Examples: |
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| 195 | #D- |
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| 196 | function IGCM_sys_RshMaster { |
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[544] | 197 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 198 | /bin/ksh <<-EOF |
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[222] | 199 | export libIGCM=${libIGCM} |
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| 200 | export DEBUG_debug=${DEBUG_debug} |
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| 201 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 202 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 203 | ${@} |
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| 204 | EOF |
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[544] | 205 | if [ $? -gt 0 ] ; then |
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| 206 | echo "IGCM_sys_RshMaster : erreur." |
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| 207 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 208 | fi |
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| 209 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[222] | 210 | } |
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| 211 | |
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| 212 | #D-#================================================== |
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| 213 | #D-function IGCM_sys_RshArchive |
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| 214 | #D-* Purpose: Archive rsh command |
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| 215 | #D-* Examples: |
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| 216 | #D- |
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| 217 | function IGCM_sys_RshArchive { |
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[544] | 218 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 219 | /bin/ksh <<-EOF |
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[222] | 220 | ${@} |
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| 221 | EOF |
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[544] | 222 | if [ $? -gt 0 ] ; then |
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| 223 | echo "IGCM_sys_RshArchive : erreur." |
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| 224 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 225 | fi |
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| 226 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[222] | 227 | } |
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| 228 | |
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| 229 | #D-#================================================== |
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| 230 | #D-function IGCM_sys_RshPost |
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| 231 | #D-* Purpose: Post-process rsh command |
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| 232 | #D-* Examples: |
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| 233 | #D- |
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| 234 | function IGCM_sys_RshPost { |
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[544] | 235 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 236 | if ( $DEBUG_sys ) ; then |
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| 237 | echo "IGCM_sys_RshPost :" $@ |
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| 238 | fi |
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[324] | 239 | |
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[544] | 240 | #echo cat tmp_IGCM_sys_RshPost_$$ INITIAL |
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| 241 | #cat tmp_IGCM_sys_RshPost_$$ |
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| 242 | # keep standard input (stdin) for the loop onto temporary file |
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| 243 | cat >tmp_IGCM_sys_RshPost_$$ |
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[222] | 244 | |
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[544] | 245 | # ============ FRONTEND START ============ # |
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[451] | 246 | |
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[544] | 247 | /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 248 | if [ $? -gt 0 ] ; then |
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| 249 | echo "IGCM_sys_RshPost : erreur." |
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| 250 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 251 | fi |
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| 252 | # delete temporary file |
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| 253 | \rm tmp_IGCM_sys_RshPost_$$ |
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[451] | 254 | |
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[544] | 255 | # ============ FRONTEND END ============ # |
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| 256 | |
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| 257 | # ============ CESIUM START ============ # |
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| 258 | # typeset NB_ESSAI DELAI status i |
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| 259 | # if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then |
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| 260 | # #little hack so that rebuild submission is done on titane not an cesium |
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| 261 | # |
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| 262 | # libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' ) |
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| 263 | # POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' ) |
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| 264 | # sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 265 | # sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 266 | # sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 267 | # sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 268 | # \mv tmp.txt tmp_IGCM_sys_RshPost_$$ |
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| 269 | # |
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| 270 | # echo cat tmp_IGCM_sys_RshPost_$$ AFTER |
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| 271 | # cat tmp_IGCM_sys_RshPost_$$ |
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| 272 | # |
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| 273 | # /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 274 | # if [ $? -gt 0 ] ; then |
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| 275 | # echo "IGCM_sys_RshPost : erreur." |
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| 276 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 277 | # fi |
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| 278 | # # delete temporary file |
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| 279 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 280 | # |
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| 281 | # else |
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| 282 | # # number of tentative |
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| 283 | # NB_ESSAI=10 |
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| 284 | # # time delay between tentative |
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| 285 | # DELAI=10 |
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| 286 | # i=0 |
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| 287 | # while [ $i -ne $NB_ESSAI ] ; do |
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| 288 | # ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 289 | # status=$? |
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| 290 | # if [ ${status} -ne 0 ]; |
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| 291 | # then |
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| 292 | # sleep $DELAI |
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| 293 | # else |
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| 294 | # break |
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| 295 | # fi |
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| 296 | # let i=$i+1 |
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| 297 | # done |
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| 298 | # # delete temporary file |
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| 299 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 300 | # |
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| 301 | # if [ ${status} -gt 0 ] ; then |
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| 302 | # echo "IGCM_sys_RshPost : erreur." |
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| 303 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 304 | # fi |
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| 305 | # fi |
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| 306 | |
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| 307 | # ============ CESIUM END ============ # |
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| 308 | |
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| 309 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[222] | 310 | } |
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| 311 | |
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| 312 | #D-#================================================== |
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| 313 | #D-function IGCM_sys_SendMail |
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| 314 | #D-* Purpose: Send mail when simulation is over |
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| 315 | #D-* Examples: |
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| 316 | #D- |
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| 317 | function IGCM_sys_SendMail { |
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[544] | 318 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 319 | if ( $DEBUG_sys ) ; then |
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| 320 | echo "IGCM_sys_SendMail :" $@ |
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| 321 | fi |
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[222] | 322 | |
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[544] | 323 | if ( ${ExitFlag} ) ; then |
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| 324 | status=failed |
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| 325 | else |
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| 326 | status=completed |
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| 327 | fi |
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[452] | 328 | |
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[222] | 329 | cat << END_MAIL > job_end.mail |
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| 330 | Dear ${LOGIN}, |
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| 331 | |
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[452] | 332 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[222] | 333 | Job started : ${DateBegin} |
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| 334 | Job ended : ${DateEnd} |
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[434] | 335 | Output files are available in ${R_SAVE} |
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[452] | 336 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[222] | 337 | END_MAIL |
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| 338 | |
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| 339 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[550] | 340 | mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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[222] | 341 | elif [ -f ~/.forward ] ; then |
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[550] | 342 | mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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[222] | 343 | fi |
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| 344 | sleep 10 |
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| 345 | rm -f job_end.mail |
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| 346 | |
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[544] | 347 | if [ $? -gt 0 ] ; then |
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| 348 | echo "IGCM_sys_SendMail : erreur." |
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| 349 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 350 | fi |
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| 351 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[222] | 352 | } |
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| 353 | |
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| 354 | #D-#================================================== |
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| 355 | #D-function IGCM_sys_Mkdir |
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| 356 | #D-* Purpose: Master locale mkdir command |
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| 357 | #D-* Examples: |
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| 358 | #D- |
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| 359 | function IGCM_sys_Mkdir { |
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[544] | 360 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 361 | if ( $DEBUG_sys ) ; then |
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| 362 | echo "IGCM_sys_Mkdir :" $@ |
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| 363 | fi |
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| 364 | if [ ! -d ${1} ]; then |
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| 365 | \mkdir -p $1 |
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| 366 | if [ $? -gt 0 ] ; then |
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| 367 | echo "IGCM_sys_Mkdir : erreur." |
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| 368 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[222] | 369 | fi |
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[544] | 370 | fi |
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| 371 | # vérification : |
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| 372 | if [ ! -d ${1} ] ; then |
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| 373 | echo "IGCM_sys_Mkdir : erreur." |
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| 374 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 375 | fi |
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| 376 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[222] | 377 | } |
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| 378 | |
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| 379 | #D-#================================================== |
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| 380 | #D-function IGCM_sys_MkdirArchive |
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| 381 | #D-* Purpose: Mkdir on Archive |
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| 382 | #D-* Examples: |
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| 383 | #D- |
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| 384 | function IGCM_sys_MkdirArchive { |
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[544] | 385 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 386 | if ( $DEBUG_sys ) ; then |
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| 387 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 388 | fi |
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| 389 | #- creation de repertoire sur le serveur fichier |
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| 390 | if [ ! -d ${1} ]; then |
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| 391 | \mkdir -p $1 |
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| 392 | if [ $? -gt 0 ] ; then |
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| 393 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 394 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[222] | 395 | fi |
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[544] | 396 | fi |
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| 397 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[222] | 398 | } |
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| 399 | |
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| 400 | #D-#================================================== |
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| 401 | #D-function IGCM_sys_MkdirWork |
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| 402 | #D-* Purpose: Mkdir on Work |
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| 403 | #D-* Examples: |
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| 404 | #D- |
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| 405 | function IGCM_sys_MkdirWork { |
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[544] | 406 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 407 | if ( $DEBUG_sys ) ; then |
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| 408 | echo "IGCM_sys_MkdirWork :" $@ |
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| 409 | fi |
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| 410 | #- creation de repertoire sur le serveur fichier |
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| 411 | if [ ! -d ${1} ]; then |
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| 412 | \mkdir -p $1 |
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| 413 | if [ $? -gt 0 ] ; then |
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| 414 | echo "IGCM_sys_MkdirWork : erreur." |
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| 415 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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[222] | 416 | fi |
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[544] | 417 | fi |
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| 418 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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[222] | 419 | } |
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| 420 | |
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| 421 | #D-#================================================== |
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| 422 | #D-function IGCM_sys_Cd |
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| 423 | #D-* Purpose: master cd command |
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| 424 | #D-* Examples: |
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| 425 | #D- |
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| 426 | function IGCM_sys_Cd { |
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[544] | 427 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 428 | if ( $DEBUG_sys ) ; then |
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| 429 | echo "IGCM_sys_Cd :" $@ |
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| 430 | fi |
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| 431 | \cd $1 |
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| 432 | if [ $? -gt 0 ] ; then |
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| 433 | echo "IGCM_sys_Cd : erreur." |
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| 434 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 435 | fi |
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| 436 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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[222] | 437 | } |
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| 438 | |
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| 439 | #D-#================================================== |
---|
| 440 | #D-function IGCM_sys_Chmod |
---|
| 441 | #D-* Purpose: Chmod |
---|
| 442 | #D-* Examples: |
---|
| 443 | #D- |
---|
| 444 | function IGCM_sys_Chmod { |
---|
[544] | 445 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
---|
| 446 | if ( $DEBUG_sys ) ; then |
---|
| 447 | echo "IGCM_sys_Chmod :" $@ |
---|
| 448 | fi |
---|
| 449 | if [ $DRYRUN -le 1 ]; then |
---|
| 450 | \chmod $@ |
---|
| 451 | if [ $? -gt 0 ] ; then |
---|
| 452 | echo "IGCM_sys_Chmod : erreur." |
---|
| 453 | IGCM_debug_Exit "IGCM_sys_Chmod" |
---|
[222] | 454 | fi |
---|
[544] | 455 | else |
---|
| 456 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 457 | fi |
---|
| 458 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
---|
[222] | 459 | } |
---|
| 460 | |
---|
| 461 | #D-#================================================== |
---|
| 462 | #D-function IGCM_sys_FileSize |
---|
| 463 | #D-* Purpose: Filesize |
---|
| 464 | #D-* Examples: |
---|
| 465 | #D- |
---|
| 466 | function IGCM_sys_FileSize { |
---|
[544] | 467 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
---|
[222] | 468 | |
---|
[544] | 469 | typeset sizeF |
---|
| 470 | set +A sizeF -- $( ls -la ${1} ) |
---|
| 471 | if [ $? -gt 0 ] ; then |
---|
| 472 | IGCM_debug_Exit "IGCM_sys_FileSize" |
---|
| 473 | fi |
---|
| 474 | eval ${2}=${sizeF[4]} |
---|
[222] | 475 | |
---|
[544] | 476 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
[222] | 477 | } |
---|
| 478 | |
---|
| 479 | #D-#================================================== |
---|
| 480 | #D-function IGCM_sys_TestDir |
---|
| 481 | #D-* Purpose: Test Directory that must exists |
---|
| 482 | #D-* Examples: |
---|
| 483 | #D- |
---|
| 484 | function IGCM_sys_TestDir { |
---|
[544] | 485 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
| 486 | if ( $DEBUG_sys ) ; then |
---|
| 487 | echo "IGCM_sys_TestDir :" $@ |
---|
| 488 | fi |
---|
| 489 | typeset ExistFlag |
---|
| 490 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 491 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
[222] | 492 | |
---|
[544] | 493 | return ${ExistFlag} |
---|
[222] | 494 | } |
---|
| 495 | |
---|
| 496 | #D-#================================================== |
---|
| 497 | #D-function IGCM_sys_TestDirArchive |
---|
| 498 | #D-* Purpose: Test Directory that must exists on Archive |
---|
| 499 | #D-* Examples: |
---|
| 500 | #D- |
---|
| 501 | function IGCM_sys_TestDirArchive { |
---|
[544] | 502 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
| 503 | if ( $DEBUG_sys ) ; then |
---|
| 504 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
| 505 | fi |
---|
| 506 | typeset ExistFlag |
---|
| 507 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 508 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
[222] | 509 | |
---|
[544] | 510 | return ${ExistFlag} |
---|
[222] | 511 | } |
---|
| 512 | |
---|
| 513 | #D-#================================================== |
---|
[548] | 514 | #D-function IGCM_sys_IsFileArchived |
---|
| 515 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 516 | #D-* Examples: |
---|
| 517 | #D- |
---|
| 518 | function IGCM_sys_IsFileArchived { |
---|
| 519 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
| 520 | if ( $DEBUG_sys ) ; then |
---|
| 521 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
| 522 | fi |
---|
| 523 | typeset IsArchivedFlag |
---|
| 524 | IsArchivedFlag=$( [ X$( echo $1 | grep ^\/dmnfs ) != X ] && echo 0 || echo 1 ) |
---|
| 525 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
| 526 | |
---|
| 527 | return ${IsArchivedFlag} |
---|
| 528 | } |
---|
| 529 | |
---|
| 530 | #D-#================================================== |
---|
[222] | 531 | #D-function IGCM_sys_TestFileArchive |
---|
| 532 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 533 | #D-* Examples: |
---|
| 534 | #D- |
---|
| 535 | function IGCM_sys_TestFileArchive { |
---|
[544] | 536 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
| 537 | if ( $DEBUG_sys ) ; then |
---|
| 538 | echo "IGCM_sys_TestFileArchive :" $@ |
---|
| 539 | fi |
---|
| 540 | typeset ExistFlag |
---|
| 541 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 542 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
[222] | 543 | |
---|
[544] | 544 | return ${ExistFlag} |
---|
[222] | 545 | } |
---|
| 546 | |
---|
| 547 | #D-#================================================== |
---|
[544] | 548 | #D-function IGCM_sys_TestFileBuffer |
---|
| 549 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
| 550 | #D-* Examples: |
---|
| 551 | #D- |
---|
| 552 | function IGCM_sys_TestFileBuffer { |
---|
| 553 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
| 554 | typeset ExistFlag |
---|
| 555 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 556 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
| 557 | |
---|
| 558 | return ${ExistFlag} |
---|
| 559 | } |
---|
| 560 | |
---|
| 561 | #D-#================================================== |
---|
[222] | 562 | #D-function IGCM_sys_CountFileArchive |
---|
| 563 | #D-* Purpose: Count files on Archive filesystem |
---|
| 564 | #D-* Examples: |
---|
| 565 | #D- |
---|
| 566 | function IGCM_sys_CountFileArchive { |
---|
[544] | 567 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
| 568 | ls ${@} 2>/dev/null | wc -l |
---|
| 569 | if [ $? -gt 0 ] ; then |
---|
| 570 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
| 571 | fi |
---|
| 572 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
[222] | 573 | } |
---|
| 574 | |
---|
| 575 | #D-#================================================== |
---|
[544] | 576 | #D-function IGCM_sys_CountFileBuffer |
---|
| 577 | #D-* Purpose: Count files on Scratch filesystem |
---|
| 578 | #D-* Examples: |
---|
| 579 | #D- |
---|
| 580 | function IGCM_sys_CountFileBuffer { |
---|
| 581 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
| 582 | ls ${@} 2>/dev/null | wc -l |
---|
| 583 | if [ $? -gt 0 ] ; then |
---|
| 584 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
| 585 | fi |
---|
| 586 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
| 587 | } |
---|
| 588 | |
---|
| 589 | #D-#================================================== |
---|
[222] | 590 | #D-function IGCM_sys_Tree |
---|
| 591 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 592 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 593 | #D- |
---|
| 594 | function IGCM_sys_Tree { |
---|
[544] | 595 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 596 | if ( $DEBUG_sys ) ; then |
---|
| 597 | echo "IGCM_sys_Tree :" $@ |
---|
| 598 | fi |
---|
[222] | 599 | |
---|
[544] | 600 | \ls -lR ${@} |
---|
[222] | 601 | |
---|
[544] | 602 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[222] | 603 | } |
---|
| 604 | |
---|
| 605 | #D-#================================================== |
---|
| 606 | #D-function IGCM_sys_Tar |
---|
[544] | 607 | #D-* Purpose: master tar command |
---|
[222] | 608 | #D-* Examples: |
---|
| 609 | #D- |
---|
| 610 | function IGCM_sys_Tar { |
---|
[544] | 611 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 612 | if ( $DEBUG_sys ) ; then |
---|
| 613 | echo "IGCM_sys_Tar :" $@ |
---|
| 614 | fi |
---|
| 615 | \tar cf $@ |
---|
| 616 | if [ $? -gt 0 ] ; then |
---|
| 617 | echo "IGCM_sys_Tar : erreur." |
---|
| 618 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 619 | fi |
---|
| 620 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[222] | 621 | } |
---|
| 622 | |
---|
| 623 | #D-#================================================== |
---|
| 624 | #D-function IGCM_sys_UnTar |
---|
| 625 | #D-* Purpose: master un-tar command |
---|
| 626 | #D-* Examples: |
---|
| 627 | #D- |
---|
| 628 | function IGCM_sys_UnTar { |
---|
[544] | 629 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 630 | if ( $DEBUG_sys ) ; then |
---|
| 631 | echo "IGCM_sys_UnTar :" $@ |
---|
| 632 | fi |
---|
| 633 | \tar xvf $1 |
---|
| 634 | if [ $? -gt 0 ] ; then |
---|
| 635 | echo "IGCM_sys_UnTar : erreur." |
---|
| 636 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 637 | fi |
---|
| 638 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[222] | 639 | } |
---|
| 640 | |
---|
| 641 | #D-#================================================== |
---|
| 642 | #D-function IGCM_sys_Qsub |
---|
| 643 | #D-* Purpose: Qsub new job |
---|
| 644 | #D-* Examples: |
---|
| 645 | #D- |
---|
| 646 | function IGCM_sys_Qsub { |
---|
[544] | 647 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 648 | if ( $DEBUG_sys ) ; then |
---|
| 649 | echo "IGCM_sys_Qsub :" $@ |
---|
| 650 | fi |
---|
| 651 | typeset options |
---|
| 652 | if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then |
---|
| 653 | options=" -o ${Script_Output} -e ${Script_Output}" |
---|
| 654 | else |
---|
| 655 | options=" -o ${Script_Output} -e ${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}" |
---|
| 656 | fi |
---|
[467] | 657 | |
---|
[544] | 658 | /usr/local/bin/ccc_msub ${options} < $1 |
---|
| 659 | if [ $? -gt 0 ] ; then |
---|
| 660 | echo "IGCM_sys_Qsub : erreur ${options} $1" |
---|
| 661 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 662 | fi |
---|
| 663 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
[222] | 664 | } |
---|
| 665 | |
---|
| 666 | #D-#================================================== |
---|
| 667 | #D-function IGCM_sys_QsubPost |
---|
| 668 | #D-* Purpose: Qsub new job on scalaire |
---|
| 669 | #D-* Examples: |
---|
| 670 | #D- |
---|
| 671 | function IGCM_sys_QsubPost { |
---|
[544] | 672 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 673 | if ( $DEBUG_sys ) ; then |
---|
| 674 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 675 | fi |
---|
| 676 | |
---|
| 677 | # Need to export listVarEnv for cesium |
---|
| 678 | # NO Need to export listVarEnv for titane |
---|
| 679 | # ============ FRONTEND START ============ # |
---|
| 680 | |
---|
| 681 | /usr/local/bin/ccc_msub -p ${BRIDGE_MSUB_PROJECT} -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job |
---|
| 682 | |
---|
| 683 | # ============ FRONTEND END ============ # |
---|
| 684 | |
---|
| 685 | # ============ CESIUM START ============ # |
---|
| 686 | # typeset NB_ESSAI DELAI status i |
---|
| 687 | # # number of tentative |
---|
| 688 | # NB_ESSAI=10 |
---|
| 689 | # # time delay between tentative |
---|
| 690 | # DELAI=10 |
---|
| 691 | # (( i = 0 )) |
---|
| 692 | # while [ $i -lt $NB_ESSAI ] ; do |
---|
| 693 | # /usr/local/bin/ccc_msub -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job |
---|
| 694 | # status=$? |
---|
| 695 | # if [ ${status} -gt 0 ]; then |
---|
| 696 | # sleep $DELAI |
---|
| 697 | # else |
---|
| 698 | # break |
---|
| 699 | # fi |
---|
| 700 | # (( i = i + 1 )) |
---|
| 701 | # done |
---|
| 702 | # ============ CESIUM END ============ # |
---|
| 703 | |
---|
| 704 | if [ $? -gt 0 ] ; then |
---|
| 705 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 706 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 707 | fi |
---|
| 708 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[222] | 709 | } |
---|
| 710 | |
---|
| 711 | #D-************************* |
---|
| 712 | #D- File transfer functions |
---|
| 713 | #D-************************* |
---|
| 714 | #D- |
---|
| 715 | |
---|
| 716 | #D-#================================================== |
---|
| 717 | #D-function IGCM_sys_Rsync_out |
---|
| 718 | #D-* Purpose: treat return val of rsync |
---|
| 719 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 720 | #D- Error values and explanations can depend on your system version. |
---|
| 721 | function IGCM_sys_Rsync_out { |
---|
[544] | 722 | RET=$1 |
---|
| 723 | if [ ! $RET ] ; then |
---|
| 724 | echo "rsync error !" |
---|
| 725 | fi |
---|
[222] | 726 | |
---|
[544] | 727 | if [ $MYLANG = "fr" ]; then |
---|
| 728 | case $RET in |
---|
| 729 | 0) return ;; |
---|
| 730 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 731 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 732 | return;; |
---|
| 733 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 734 | echo "Incompatibilité de protocole." |
---|
| 735 | return;; |
---|
| 736 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 737 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 738 | echo "répertoires" |
---|
| 739 | return;; |
---|
| 740 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 741 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 742 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 743 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 744 | echo "pas par le serveur a été spécifiée." |
---|
| 745 | return;; |
---|
| 746 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 747 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 748 | return;; |
---|
| 749 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 750 | echo "Erreur d'entrée sortie fichier" |
---|
| 751 | return;; |
---|
| 752 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 753 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 754 | return;; |
---|
| 755 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 756 | echo "Erreur avec les diagnostics du programme" |
---|
| 757 | return;; |
---|
| 758 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 759 | echo "Erreur dans le code IPC" |
---|
| 760 | return;; |
---|
| 761 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 762 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 763 | return;; |
---|
| 764 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 765 | echo "Une erreur retournée par waitpid()" |
---|
| 766 | return;; |
---|
| 767 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 768 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 769 | return;; |
---|
| 770 | 23) echo "" |
---|
| 771 | echo "Erreur fichier inexistant" |
---|
| 772 | return;; |
---|
| 773 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 774 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 775 | return;; |
---|
| 776 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
| 777 | return;; |
---|
| 778 | esac |
---|
| 779 | elif [ $MYLANG = "en" ] ; then |
---|
| 780 | case $RET in |
---|
| 781 | 0) return;; |
---|
| 782 | 1) echo "rsync error : Syntax or usage error " |
---|
| 783 | return;; |
---|
| 784 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 785 | return;; |
---|
| 786 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 787 | return;; |
---|
| 788 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 789 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 790 | echo "them; or an option was specified that is supported by the client and" |
---|
| 791 | echo "not by the server." |
---|
| 792 | return;; |
---|
| 793 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 794 | return;; |
---|
| 795 | 10) echo "rsync error : Error in socket I/O " |
---|
| 796 | return;; |
---|
| 797 | 11) echo "rsync error : Error in file I/O " |
---|
| 798 | return;; |
---|
| 799 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 800 | return;; |
---|
| 801 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 802 | return;; |
---|
| 803 | 14) echo "rsync error : Error in IPC code " |
---|
| 804 | return;; |
---|
| 805 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 806 | return;; |
---|
| 807 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 808 | return;; |
---|
| 809 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 810 | return;; |
---|
| 811 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 812 | return;; |
---|
| 813 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 814 | return;; |
---|
| 815 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 816 | return;; |
---|
| 817 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
| 818 | return;; |
---|
| 819 | esac |
---|
| 820 | else |
---|
| 821 | echo "unknown language $MYLANG." |
---|
| 822 | return |
---|
| 823 | fi |
---|
[222] | 824 | } |
---|
| 825 | |
---|
| 826 | #D-#================================================== |
---|
| 827 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 828 | #D-* Purpose: Mirror libIGCM PATH and lib to cesium |
---|
| 829 | #D-* Examples: |
---|
| 830 | #D- |
---|
| 831 | function IGCM_sys_Mirror_libIGCM { |
---|
[544] | 832 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 833 | if ( $DEBUG_sys ) ; then |
---|
| 834 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 835 | fi |
---|
[222] | 836 | |
---|
[544] | 837 | typeset RET DEST |
---|
[222] | 838 | |
---|
[544] | 839 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
[222] | 840 | |
---|
[544] | 841 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 842 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
| 843 | RET=$? |
---|
[222] | 844 | |
---|
[544] | 845 | if [ ${RET} -gt 0 ] ; then |
---|
| 846 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium." |
---|
| 847 | cat out_rsync |
---|
| 848 | fi |
---|
| 849 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
[222] | 850 | } |
---|
| 851 | |
---|
| 852 | #==================================================== |
---|
| 853 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 854 | if ( $MirrorlibIGCM ) ; then |
---|
[544] | 855 | IGCM_sys_Mirror_libIGCM |
---|
[222] | 856 | fi |
---|
| 857 | |
---|
| 858 | #D-#================================================== |
---|
| 859 | #D-function IGCM_sys_Cp |
---|
| 860 | #D-* Purpose: generic cp |
---|
| 861 | #D-* Examples: |
---|
| 862 | #D- |
---|
| 863 | function IGCM_sys_Cp { |
---|
[544] | 864 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 865 | if ( $DEBUG_sys ) ; then |
---|
| 866 | echo "IGCM_sys_Cp :" $@ |
---|
| 867 | fi |
---|
[222] | 868 | |
---|
[544] | 869 | typeset RET |
---|
[222] | 870 | |
---|
[544] | 871 | echo cp $@ > out_rsync 2>&1 |
---|
| 872 | \cp $@ >> out_rsync 2>&1 |
---|
| 873 | RET=$? |
---|
[222] | 874 | |
---|
[544] | 875 | if [ ${RET} -gt 0 ] ; then |
---|
| 876 | echo "IGCM_sys_Cp : error." |
---|
| 877 | cat out_rsync |
---|
| 878 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 879 | else |
---|
| 880 | \rm out_rsync |
---|
| 881 | fi |
---|
| 882 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[222] | 883 | } |
---|
| 884 | |
---|
| 885 | #D-#================================================== |
---|
| 886 | #D-function IGCM_sys_Rm |
---|
| 887 | #D-* Purpose: generic rm |
---|
| 888 | #D-* Examples: |
---|
| 889 | #D- |
---|
| 890 | function IGCM_sys_Rm { |
---|
[544] | 891 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 892 | if ( $DEBUG_sys ) ; then |
---|
| 893 | echo "IGCM_sys_Rm :" $@ |
---|
| 894 | fi |
---|
[222] | 895 | |
---|
[544] | 896 | typeset RET |
---|
[222] | 897 | |
---|
[544] | 898 | echo rm $@ > out_rsync 2>&1 |
---|
| 899 | \rm $@ >> out_rsync 2>&1 |
---|
| 900 | RET=$? |
---|
[222] | 901 | |
---|
[544] | 902 | if [ ${RET} -gt 0 ] ; then |
---|
| 903 | echo "IGCM_sys_Rm : error." |
---|
| 904 | cat out_rsync |
---|
| 905 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 906 | else |
---|
| 907 | \rm out_rsync |
---|
| 908 | fi |
---|
| 909 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[222] | 910 | } |
---|
| 911 | |
---|
| 912 | #D-#================================================== |
---|
[467] | 913 | #D-function IGCM_sys_RmRunDir |
---|
| 914 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 915 | #D- scheduler will do the job) |
---|
| 916 | #D-* Examples: |
---|
| 917 | #D- |
---|
| 918 | function IGCM_sys_RmRunDir { |
---|
[544] | 919 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 920 | if ( $DEBUG_sys ) ; then |
---|
| 921 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 922 | fi |
---|
[467] | 923 | |
---|
[544] | 924 | typeset RET |
---|
[467] | 925 | |
---|
[544] | 926 | echo rm $@ > out_rsync 2>&1 |
---|
| 927 | \rm $@ >> out_rsync 2>&1 |
---|
| 928 | RET=$? |
---|
[467] | 929 | |
---|
[544] | 930 | if [ ${RET} -gt 0 ] ; then |
---|
| 931 | echo "IGCM_sys_RmRunDir : error." |
---|
| 932 | cat out_rsync |
---|
| 933 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
| 934 | else |
---|
| 935 | \rm out_rsync |
---|
| 936 | fi |
---|
| 937 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[467] | 938 | } |
---|
| 939 | |
---|
| 940 | #D-#================================================== |
---|
[222] | 941 | #D-function IGCM_sys_Mv |
---|
| 942 | #D-* Purpose: generic move |
---|
| 943 | #D-* Examples: |
---|
| 944 | #D- |
---|
| 945 | function IGCM_sys_Mv { |
---|
[544] | 946 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 947 | if ( $DEBUG_sys ) ; then |
---|
| 948 | echo "IGCM_sys_Mv :" $@ |
---|
| 949 | fi |
---|
[222] | 950 | |
---|
[544] | 951 | if [ $DRYRUN = 0 ]; then |
---|
[222] | 952 | |
---|
[544] | 953 | typeset RET |
---|
[222] | 954 | |
---|
[544] | 955 | echo mv $@ > out_rsync 2>&1 |
---|
| 956 | \mv $@ >> out_rsync 2>&1 |
---|
| 957 | RET=$? |
---|
| 958 | |
---|
| 959 | if [ ${RET} -gt 0 ] ; then |
---|
| 960 | echo "IGCM_sys_Mv : error in mv." |
---|
| 961 | cat out_rsync |
---|
| 962 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[222] | 963 | else |
---|
[544] | 964 | \rm out_rsync |
---|
[222] | 965 | fi |
---|
[544] | 966 | else |
---|
| 967 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 968 | fi |
---|
[222] | 969 | |
---|
[544] | 970 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[222] | 971 | } |
---|
| 972 | |
---|
| 973 | #D-#================================================== |
---|
| 974 | #D-function IGCM_sys_Put_Dir |
---|
| 975 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 976 | #D-* Examples: |
---|
| 977 | #D- |
---|
| 978 | function IGCM_sys_Put_Dir { |
---|
[544] | 979 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 980 | if ( $DEBUG_sys ) ; then |
---|
| 981 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 982 | fi |
---|
| 983 | if [ $DRYRUN = 0 ]; then |
---|
| 984 | if [ ! -d ${1} ] ; then |
---|
| 985 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 986 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 987 | return |
---|
[222] | 988 | fi |
---|
| 989 | |
---|
[544] | 990 | typeset RET |
---|
[222] | 991 | |
---|
[544] | 992 | # Only if we use rsync |
---|
| 993 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 994 | # |
---|
| 995 | #USUAL WAY |
---|
| 996 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 997 | RET=$? |
---|
[222] | 998 | |
---|
[544] | 999 | if [ ${RET} -gt 0 ] ; then |
---|
| 1000 | echo "IGCM_sys_Put_Dir : error." |
---|
| 1001 | cat out_rsync |
---|
| 1002 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[222] | 1003 | else |
---|
[544] | 1004 | \rm out_rsync |
---|
[222] | 1005 | fi |
---|
[544] | 1006 | else |
---|
| 1007 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1008 | fi |
---|
| 1009 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[222] | 1010 | } |
---|
| 1011 | |
---|
| 1012 | #D-#================================================== |
---|
| 1013 | #D-function IGCM_sys_Get_Dir |
---|
[544] | 1014 | #D-* Purpose: Copy a complete directory from ${ARCHIVE} |
---|
[222] | 1015 | #D-* Examples: |
---|
| 1016 | #D- |
---|
| 1017 | function IGCM_sys_Get_Dir { |
---|
[544] | 1018 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 1019 | if ( $DEBUG_sys ) ; then |
---|
| 1020 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 1021 | fi |
---|
| 1022 | if [ $DRYRUN = 0 ]; then |
---|
| 1023 | # if [ ! -d ${1} ] ; then |
---|
| 1024 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 1025 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 1026 | # return |
---|
| 1027 | # fi |
---|
[222] | 1028 | |
---|
[544] | 1029 | typeset RET |
---|
[222] | 1030 | |
---|
[544] | 1031 | # Only if we use rsync |
---|
| 1032 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1033 | # |
---|
| 1034 | # USUAL WAY |
---|
| 1035 | # add dmfind/dmget (to demigrate all offline files) : |
---|
[587] | 1036 | #dmfind $1 -state MIG -o -state OFL -o -state PAR | dmget |
---|
[544] | 1037 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 1038 | RET=$? |
---|
[222] | 1039 | |
---|
[544] | 1040 | if [ ${RET} -gt 0 ] ; then |
---|
| 1041 | echo "IGCM_sys_Get_Dir : error." |
---|
| 1042 | cat out_rsync |
---|
| 1043 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[222] | 1044 | else |
---|
[544] | 1045 | \rm out_rsync |
---|
[222] | 1046 | fi |
---|
[544] | 1047 | else |
---|
| 1048 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1049 | fi |
---|
| 1050 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[222] | 1051 | } |
---|
| 1052 | |
---|
| 1053 | #D-#================================================== |
---|
| 1054 | #D-function IGCM_sys_Get_Master |
---|
| 1055 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 1056 | #D-* Examples: |
---|
| 1057 | #D- |
---|
| 1058 | function IGCM_sys_Get_Master { |
---|
[544] | 1059 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 1060 | if ( $DEBUG_sys ) ; then |
---|
| 1061 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 1062 | fi |
---|
| 1063 | if [ $DRYRUN = 0 ]; then |
---|
| 1064 | if [ ! -d ${1} ] ; then |
---|
| 1065 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 1066 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 1067 | return |
---|
[222] | 1068 | fi |
---|
| 1069 | |
---|
[544] | 1070 | typeset RET |
---|
[222] | 1071 | |
---|
[544] | 1072 | #USUAL WAY |
---|
| 1073 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 1074 | RET=$? |
---|
[222] | 1075 | |
---|
[544] | 1076 | if [ ${RET} -gt 0 ] ; then |
---|
| 1077 | echo "IGCM_sys_Get_Master : error." |
---|
| 1078 | cat out_rsync |
---|
| 1079 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[222] | 1080 | else |
---|
[544] | 1081 | \rm out_rsync |
---|
[222] | 1082 | fi |
---|
[544] | 1083 | else |
---|
| 1084 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1085 | fi |
---|
| 1086 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[222] | 1087 | } |
---|
| 1088 | |
---|
| 1089 | #D-#================================================== |
---|
| 1090 | #D-function IGCM_sys_Put_Rest |
---|
[544] | 1091 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
[222] | 1092 | #D- File and target directory must exist. |
---|
| 1093 | #D-* Examples: |
---|
| 1094 | #D- |
---|
| 1095 | function IGCM_sys_Put_Rest { |
---|
[544] | 1096 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 1097 | if ( $DEBUG_sys ) ; then |
---|
| 1098 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 1099 | fi |
---|
| 1100 | if [ $DRYRUN = 0 ]; then |
---|
| 1101 | if [ ! -f ${1} ] ; then |
---|
| 1102 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 1103 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1104 | fi |
---|
| 1105 | |
---|
[544] | 1106 | typeset RET |
---|
| 1107 | # |
---|
| 1108 | if [ X${JobType} = XRUN ] ; then |
---|
| 1109 | IGCM_sys_Chmod 444 ${1} |
---|
| 1110 | fi |
---|
[222] | 1111 | |
---|
[544] | 1112 | # |
---|
| 1113 | # USUAL WAY |
---|
| 1114 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1115 | RET=$? |
---|
| 1116 | |
---|
[245] | 1117 | # #RSYNC WITH NETWORK SSH CALL |
---|
[538] | 1118 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1119 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1120 | |
---|
| 1121 | # #RSYNC WITH NFS USE |
---|
| 1122 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1123 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
| 1124 | |
---|
| 1125 | # RET=$? |
---|
| 1126 | # IGCM_sys_Rsync_out $RET |
---|
| 1127 | |
---|
| 1128 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1129 | # (( RET=RET+$? )) |
---|
| 1130 | |
---|
[544] | 1131 | if [ ${RET} -gt 0 ] ; then |
---|
| 1132 | echo "IGCM_sys_Put_Rest : error." |
---|
| 1133 | cat out_rsync |
---|
| 1134 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1135 | else |
---|
[544] | 1136 | \rm out_rsync |
---|
[222] | 1137 | fi |
---|
[544] | 1138 | else |
---|
| 1139 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1140 | fi |
---|
| 1141 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[222] | 1142 | } |
---|
| 1143 | |
---|
| 1144 | #D-#================================================== |
---|
[544] | 1145 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 1146 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 1147 | #D- File and target directory must exist. |
---|
| 1148 | #D-* Examples: |
---|
| 1149 | #D- |
---|
| 1150 | function IGCM_sys_PutBuffer_Rest { |
---|
| 1151 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 1152 | if ( $DEBUG_sys ) ; then |
---|
| 1153 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 1154 | fi |
---|
| 1155 | if [ $DRYRUN = 0 ]; then |
---|
| 1156 | if [ ! -f ${1} ] ; then |
---|
| 1157 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 1158 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1159 | fi |
---|
| 1160 | |
---|
| 1161 | typeset RET |
---|
| 1162 | # |
---|
| 1163 | if [ X${JobType} = XRUN ] ; then |
---|
| 1164 | IGCM_sys_Chmod 444 ${1} |
---|
| 1165 | fi |
---|
| 1166 | |
---|
| 1167 | # |
---|
| 1168 | # USUAL WAY |
---|
| 1169 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1170 | RET=$? |
---|
| 1171 | |
---|
| 1172 | if [ ${RET} -gt 0 ] ; then |
---|
| 1173 | echo "IGCM_sys_PutBuffer_Rest : error." |
---|
| 1174 | cat out_rsync |
---|
| 1175 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1176 | else |
---|
| 1177 | \rm out_rsync |
---|
| 1178 | fi |
---|
| 1179 | else |
---|
| 1180 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1181 | fi |
---|
| 1182 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 1183 | } |
---|
| 1184 | |
---|
| 1185 | #D-#================================================== |
---|
[222] | 1186 | #D-function IGCM_sys_Put_Out |
---|
[544] | 1187 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
[222] | 1188 | #D-* Examples: |
---|
| 1189 | #D- |
---|
| 1190 | function IGCM_sys_Put_Out { |
---|
[544] | 1191 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 1192 | if ( $DEBUG_sys ) ; then |
---|
| 1193 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 1194 | fi |
---|
| 1195 | if [ $DRYRUN = 0 ]; then |
---|
| 1196 | if [ ! -f ${1} ] ; then |
---|
| 1197 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 1198 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1199 | return 1 |
---|
[222] | 1200 | fi |
---|
[544] | 1201 | # |
---|
| 1202 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 1203 | # |
---|
| 1204 | typeset RET |
---|
[222] | 1205 | |
---|
[544] | 1206 | #===================================================== |
---|
| 1207 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1208 | #===================================================== |
---|
[222] | 1209 | |
---|
[544] | 1210 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1211 | #if [ $? -eq 0 ] ; then |
---|
| 1212 | # typeset WORKPATH FILEPATH |
---|
| 1213 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
| 1214 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
| 1215 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
| 1216 | # # |
---|
| 1217 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
| 1218 | #fi |
---|
[222] | 1219 | |
---|
[544] | 1220 | if [ X${JobType} = XRUN ] ; then |
---|
| 1221 | if [ X${3} = X ] ; then |
---|
| 1222 | IGCM_sys_Chmod 444 ${1} |
---|
| 1223 | fi |
---|
| 1224 | fi |
---|
| 1225 | # |
---|
| 1226 | # USUAL WAY |
---|
| 1227 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1228 | RET=$? |
---|
[222] | 1229 | |
---|
[245] | 1230 | # #RSYNC WITH NETWORK SSH CALL |
---|
[538] | 1231 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1232 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1233 | |
---|
| 1234 | # #RSYNC WITH NFS USE |
---|
| 1235 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1236 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
| 1237 | |
---|
| 1238 | # RET=$? |
---|
| 1239 | # IGCM_sys_Rsync_out $RET |
---|
| 1240 | |
---|
| 1241 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1242 | # (( RET=RET+$? )) |
---|
| 1243 | |
---|
[544] | 1244 | if [ ${RET} -gt 0 ] ; then |
---|
| 1245 | echo "IGCM_sys_Put_Out : error." |
---|
| 1246 | cat out_rsync |
---|
| 1247 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
[222] | 1248 | else |
---|
[544] | 1249 | \rm out_rsync |
---|
[222] | 1250 | fi |
---|
[544] | 1251 | else |
---|
| 1252 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1253 | fi |
---|
| 1254 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1255 | return 0 |
---|
[222] | 1256 | } |
---|
| 1257 | |
---|
| 1258 | #D-#================================================== |
---|
[544] | 1259 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1260 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1261 | #D-* Examples: |
---|
| 1262 | #D- |
---|
| 1263 | function IGCM_sys_PutBuffer_Out { |
---|
| 1264 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1265 | if ( $DEBUG_sys ) ; then |
---|
| 1266 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1267 | fi |
---|
| 1268 | if [ $DRYRUN = 0 ]; then |
---|
| 1269 | if [ ! -f ${1} ] ; then |
---|
| 1270 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1271 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1272 | return 1 |
---|
| 1273 | fi |
---|
| 1274 | # |
---|
| 1275 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1276 | # |
---|
| 1277 | typeset RET |
---|
| 1278 | |
---|
| 1279 | if [ X${JobType} = XRUN ] ; then |
---|
| 1280 | if [ X${3} = X ] ; then |
---|
| 1281 | IGCM_sys_Chmod 444 ${1} |
---|
| 1282 | fi |
---|
| 1283 | fi |
---|
| 1284 | # |
---|
| 1285 | # USUAL WAY |
---|
| 1286 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1287 | RET=$? |
---|
| 1288 | |
---|
| 1289 | if [ ${RET} -gt 0 ] ; then |
---|
| 1290 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1291 | cat out_rsync |
---|
| 1292 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
| 1293 | else |
---|
| 1294 | \rm out_rsync |
---|
| 1295 | fi |
---|
| 1296 | else |
---|
| 1297 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1298 | fi |
---|
| 1299 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1300 | return 0 |
---|
| 1301 | } |
---|
| 1302 | |
---|
| 1303 | #D-#================================================== |
---|
[222] | 1304 | #D-function IGCM_sys_Get |
---|
| 1305 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1306 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1307 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1308 | function IGCM_sys_Get { |
---|
[544] | 1309 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[222] | 1310 | |
---|
[544] | 1311 | typeset DEST RET dm_liste ifile target file_work |
---|
[222] | 1312 | |
---|
[544] | 1313 | if ( $DEBUG_sys ) ; then |
---|
| 1314 | echo "IGCM_sys_Get :" $@ |
---|
| 1315 | fi |
---|
| 1316 | if [ $DRYRUN -le 2 ]; then |
---|
| 1317 | if [ X${1} = X'/l' ] ; then |
---|
| 1318 | # test if the first file is present in the old computation : |
---|
| 1319 | eval set +A dm_liste \${${2}} |
---|
| 1320 | else |
---|
| 1321 | eval set +A dm_liste ${1} |
---|
[222] | 1322 | fi |
---|
[544] | 1323 | eval DEST=\${${#}} |
---|
[222] | 1324 | |
---|
[544] | 1325 | #===================================================== |
---|
| 1326 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1327 | #===================================================== |
---|
[222] | 1328 | |
---|
[544] | 1329 | # Is it an R_OUT file (not R_IN) ? |
---|
| 1330 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1331 | #if [ $? -eq 0 ] ; then |
---|
| 1332 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
| 1333 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
| 1334 | # if [ -f ${file_work[0]} ] ; then |
---|
| 1335 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 1336 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1337 | # return |
---|
| 1338 | # fi |
---|
| 1339 | #fi |
---|
[222] | 1340 | |
---|
[544] | 1341 | # test if the (first) file is present in the old computation : |
---|
| 1342 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
| 1343 | RET=$? |
---|
| 1344 | if [ ${RET} -gt 0 ] ; then |
---|
| 1345 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 1346 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1347 | fi |
---|
[222] | 1348 | |
---|
[587] | 1349 | #dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1350 | ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[544] | 1351 | RET=$? |
---|
| 1352 | if [ ${RET} -gt 0 ] ; then |
---|
| 1353 | echo "WARNING IGCM_sys_Get : demigration error." |
---|
| 1354 | cat out_rsync |
---|
| 1355 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
| 1356 | fi |
---|
[222] | 1357 | |
---|
[544] | 1358 | #if [ ${RET} -gt 0 ] ; then |
---|
| 1359 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
| 1360 | # cat out_rsync |
---|
| 1361 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
| 1362 | # sleep 30 |
---|
| 1363 | # echo "We try another time" |
---|
[587] | 1364 | ## dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1365 | # ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[544] | 1366 | # RET=$? |
---|
| 1367 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1368 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
| 1369 | # cat out_rsync |
---|
| 1370 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1371 | # fi |
---|
| 1372 | # else |
---|
| 1373 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
| 1374 | # cat out_rsync |
---|
| 1375 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1376 | # fi |
---|
| 1377 | #fi |
---|
[520] | 1378 | |
---|
[544] | 1379 | #USUAL WAY |
---|
| 1380 | if [ X${1} = X'/l' ] ; then |
---|
| 1381 | (( RET=0 )) |
---|
| 1382 | for target in ${dm_liste[*]} ; do |
---|
| 1383 | local_file=$( basename ${target} ) |
---|
| 1384 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1385 | (( RET = RET + $? )) |
---|
| 1386 | done |
---|
| 1387 | else |
---|
| 1388 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1389 | RET=$? |
---|
| 1390 | fi |
---|
[520] | 1391 | |
---|
[245] | 1392 | # #RSYNC WITH NETWORK SSH CALL |
---|
[538] | 1393 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1394 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[222] | 1395 | |
---|
| 1396 | # #RSYNC WITH NFS USE |
---|
| 1397 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1398 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
| 1399 | |
---|
| 1400 | # RET=$? |
---|
| 1401 | # IGCM_sys_Rsync_out $RET |
---|
| 1402 | |
---|
| 1403 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1404 | # (( RET=RET+$? )) |
---|
| 1405 | |
---|
[544] | 1406 | if [ ${RET} -gt 0 ] ; then |
---|
| 1407 | echo "IGCM_sys_Get : copy error." |
---|
| 1408 | cat out_rsync |
---|
| 1409 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
[222] | 1410 | else |
---|
[544] | 1411 | \rm out_rsync |
---|
[222] | 1412 | fi |
---|
[544] | 1413 | else |
---|
| 1414 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1415 | fi |
---|
| 1416 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[222] | 1417 | } |
---|
| 1418 | |
---|
| 1419 | #D-#================================================== |
---|
[544] | 1420 | #D-function IGCM_sys_GetBuffer |
---|
| 1421 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1422 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1423 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1424 | function IGCM_sys_GetBuffer { |
---|
| 1425 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1426 | |
---|
| 1427 | typeset DEST RET buf_liste ifile target file_work |
---|
| 1428 | |
---|
| 1429 | if ( $DEBUG_sys ) ; then |
---|
| 1430 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1431 | fi |
---|
| 1432 | if [ $DRYRUN -le 2 ]; then |
---|
| 1433 | if [ X${1} = X'/l' ] ; then |
---|
| 1434 | # test if the first file is present in the old computation : |
---|
| 1435 | eval set +A buf_liste \${${2}} |
---|
| 1436 | else |
---|
| 1437 | eval set +A buf_liste ${1} |
---|
| 1438 | fi |
---|
| 1439 | eval DEST=\${${#}} |
---|
| 1440 | |
---|
| 1441 | #USUAL WAY |
---|
| 1442 | if [ X${1} = X'/l' ] ; then |
---|
| 1443 | (( RET=0 )) |
---|
| 1444 | for target in ${buf_liste[*]} ; do |
---|
| 1445 | local_file=$( basename ${target} ) |
---|
| 1446 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1447 | (( RET = RET + $? )) |
---|
| 1448 | done |
---|
| 1449 | else |
---|
| 1450 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1451 | RET=$? |
---|
| 1452 | fi |
---|
| 1453 | |
---|
| 1454 | if [ ${RET} -gt 0 ] ; then |
---|
| 1455 | echo "IGCM_sys_GetBuffer : copy error." |
---|
| 1456 | cat out_rsync |
---|
| 1457 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1458 | else |
---|
| 1459 | \rm out_rsync |
---|
| 1460 | fi |
---|
| 1461 | else |
---|
| 1462 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1463 | fi |
---|
| 1464 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
| 1465 | } |
---|
| 1466 | |
---|
| 1467 | #D-#================================================== |
---|
[222] | 1468 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1469 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1470 | #D-* Examples: |
---|
| 1471 | #D- |
---|
| 1472 | function IGCM_sys_GetDate_FichWork { |
---|
[544] | 1473 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1474 | if ( $DEBUG_sys ) ; then |
---|
| 1475 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1476 | fi |
---|
| 1477 | typeset dateF |
---|
| 1478 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1479 | eval ${2}=${dateF[5]} |
---|
[538] | 1480 | |
---|
[222] | 1481 | # donne la date filesys d'un fichier sur la machine work |
---|
[544] | 1482 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
[222] | 1483 | } |
---|
| 1484 | |
---|
| 1485 | #D-#================================================== |
---|
| 1486 | #D-function IGCM_sys_GetDate_FichArchive |
---|
| 1487 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
| 1488 | #D-* Examples: |
---|
| 1489 | #D- |
---|
| 1490 | function IGCM_sys_GetDate_FichArchive { |
---|
[544] | 1491 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1492 | if ( $DEBUG_sys ) ; then |
---|
| 1493 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1494 | fi |
---|
| 1495 | typeset dateF |
---|
| 1496 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1497 | eval ${2}=${dateF[5]} |
---|
| 1498 | |
---|
| 1499 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1500 | } |
---|
| 1501 | |
---|
| 1502 | #D-#================================================== |
---|
| 1503 | #D-function IGCM_sys_Dods_Rm |
---|
| 1504 | #D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole. |
---|
| 1505 | #D-* Examples: |
---|
| 1506 | #D- |
---|
| 1507 | function IGCM_sys_Dods_Rm { |
---|
| 1508 | if ( $DEBUG_sys ) ; then |
---|
| 1509 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
| 1510 | fi |
---|
| 1511 | typeset RET |
---|
| 1512 | RET=0 |
---|
| 1513 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1514 | |
---|
| 1515 | # if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
| 1516 | # echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
| 1517 | # echo "Nothing has been done." |
---|
| 1518 | # return |
---|
| 1519 | # fi |
---|
| 1520 | |
---|
| 1521 | /ccc/cont003/home/dsm/p86maf/bin/dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
[544] | 1522 | RET=$? |
---|
| 1523 | |
---|
| 1524 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1525 | # echo "IGCM_sys_Dods_Rm : error." |
---|
| 1526 | # cat out_dods_rm |
---|
| 1527 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
| 1528 | # else |
---|
| 1529 | # rm out_dods_rm |
---|
| 1530 | # fi |
---|
[538] | 1531 | |
---|
[544] | 1532 | else |
---|
| 1533 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1534 | fi |
---|
| 1535 | return $RET |
---|
[222] | 1536 | } |
---|
| 1537 | |
---|
[544] | 1538 | #D-#================================================== |
---|
| 1539 | #D-function IGCM_sys_Dods_Cp |
---|
| 1540 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
| 1541 | #D-* Examples: |
---|
| 1542 | #D- |
---|
| 1543 | function IGCM_sys_Dods_Cp { |
---|
| 1544 | if ( $DEBUG_sys ) ; then |
---|
| 1545 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
| 1546 | fi |
---|
| 1547 | typeset RET |
---|
| 1548 | RET=0 |
---|
| 1549 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1550 | |
---|
| 1551 | # if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1552 | # echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1553 | # echo "Nothing has been done." |
---|
| 1554 | # return |
---|
| 1555 | # fi |
---|
| 1556 | |
---|
| 1557 | /ccc/cont003/home/dsm/p86maf/bin/dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
[544] | 1558 | RET=$? |
---|
| 1559 | |
---|
| 1560 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1561 | # echo "IGCM_sys_Dods_Cp : error." |
---|
| 1562 | # cat out_dods_cp |
---|
| 1563 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
| 1564 | # else |
---|
| 1565 | # rm out_dods_cp |
---|
| 1566 | # fi |
---|
| 1567 | |
---|
| 1568 | else |
---|
| 1569 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1570 | fi |
---|
| 1571 | return $RET |
---|
| 1572 | } |
---|
| 1573 | |
---|
| 1574 | #D-#================================================== |
---|
| 1575 | #D-function IGCM_sys_Put_Dods |
---|
| 1576 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1577 | #D-* Examples: |
---|
| 1578 | #D- |
---|
| 1579 | function IGCM_sys_Put_Dods { |
---|
| 1580 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1581 | if ( $DEBUG_sys ) ; then |
---|
| 1582 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1583 | fi |
---|
[591] | 1584 | set -vx |
---|
[587] | 1585 | typeset RET |
---|
[544] | 1586 | if [ $DRYRUN = 0 ]; then |
---|
[587] | 1587 | if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1588 | echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should." |
---|
| 1589 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST." |
---|
| 1590 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST." |
---|
[544] | 1591 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1592 | return |
---|
| 1593 | fi |
---|
| 1594 | |
---|
[587] | 1595 | if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1596 | echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should." |
---|
| 1597 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS." |
---|
| 1598 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS." |
---|
| 1599 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1600 | return |
---|
| 1601 | fi |
---|
| 1602 | # |
---|
| 1603 | if [ -d ${R_SAVE}/${1} ] ; then |
---|
| 1604 | cd ${R_SAVE} |
---|
| 1605 | elif [ -d ${R_FIGR}/${1} ] ; then |
---|
| 1606 | cd ${R_FIGR} |
---|
| 1607 | fi |
---|
| 1608 | |
---|
[544] | 1609 | IGCM_sys_Dods_Rm ${1} |
---|
| 1610 | IGCM_sys_Dods_Cp ${1} |
---|
| 1611 | RET=0 |
---|
| 1612 | |
---|
| 1613 | if [ ${RET} -gt 0 ] ; then |
---|
| 1614 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1615 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1616 | fi |
---|
| 1617 | else |
---|
| 1618 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1619 | fi |
---|
| 1620 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1621 | } |
---|
| 1622 | |
---|
[222] | 1623 | ############################################################## |
---|
| 1624 | # REBUILD OPERATOR |
---|
| 1625 | |
---|
| 1626 | function IGCM_sys_rebuild { |
---|
[544] | 1627 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1628 | if ( $DEBUG_sys ) ; then |
---|
| 1629 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1630 | fi |
---|
| 1631 | /home/cont003/p86ipsl/X64/bin/rebuild -f -o $@ |
---|
| 1632 | if [ $? -gt 0 ] ; then |
---|
| 1633 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1634 | IGCM_debug_Exit "rebuild" |
---|
| 1635 | fi |
---|
[222] | 1636 | |
---|
[544] | 1637 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[222] | 1638 | } |
---|
| 1639 | |
---|
| 1640 | ############################################################ |
---|
| 1641 | # Activate Running Environnment Variables |
---|
| 1642 | |
---|
| 1643 | function IGCM_sys_activ_variables { |
---|
[544] | 1644 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1645 | if ( $DEBUG_sys ) ; then |
---|
| 1646 | echo "IGCM_sys_activ_variables" |
---|
| 1647 | fi |
---|
| 1648 | ulimit -s 2097152 |
---|
| 1649 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[222] | 1650 | } |
---|
| 1651 | |
---|
| 1652 | ############################################################ |
---|
| 1653 | # Desactivate Running Environnment Variables |
---|
| 1654 | |
---|
| 1655 | function IGCM_sys_desactiv_variables { |
---|
[544] | 1656 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1657 | if ( $DEBUG_sys ) ; then |
---|
| 1658 | echo "IGCM_sys_desactiv_variables" |
---|
| 1659 | fi |
---|
| 1660 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
[222] | 1661 | } |
---|
| 1662 | |
---|
| 1663 | ############################################################ |
---|
| 1664 | # Build run file |
---|
| 1665 | |
---|
| 1666 | function IGCM_sys_build_run_file { |
---|
[544] | 1667 | IGCM_debug_PushStack "IGCM_sys_build_run_file" $@ |
---|
| 1668 | if ( $DEBUG_sys ) ; then |
---|
| 1669 | echo "IGCM_sys_build_run_file " $@ |
---|
| 1670 | fi |
---|
[395] | 1671 | |
---|
[544] | 1672 | # set Number of processors for OCE here |
---|
| 1673 | NUM_PROC_OCE=5 |
---|
[395] | 1674 | |
---|
[544] | 1675 | (( NUM_PROC_ATM = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE - 1)) |
---|
| 1676 | (( nb_tot_m1 = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE )) |
---|
| 1677 | if [ $1 = MPI1 ]; then |
---|
| 1678 | cat <<EOF > run_file |
---|
[222] | 1679 | -np 1 ./oasis |
---|
| 1680 | -np ${NUM_PROC_ATM} ./lmdz.x |
---|
| 1681 | -np ${NUM_PROC_OCE} ./opa.xx |
---|
| 1682 | EOF |
---|
[544] | 1683 | config_UserChoices_JobRunOptions='"--app"' |
---|
| 1684 | IGCM_sys_Chmod u+x run_file |
---|
| 1685 | fi |
---|
| 1686 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
[222] | 1687 | |
---|
| 1688 | } |
---|
[451] | 1689 | |
---|
| 1690 | ############################################################## |
---|
| 1691 | # NCO OPERATOR |
---|
| 1692 | |
---|
[544] | 1693 | function IGCM_sys_ncap2 { |
---|
| 1694 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 1695 | if ( $DEBUG_sys ) ; then |
---|
| 1696 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 1697 | fi |
---|
| 1698 | ncap2 "$@" |
---|
| 1699 | if [ $? -gt 0 ] ; then |
---|
| 1700 | echo "IGCM_sys_ncap2 : erreur ${@}." |
---|
| 1701 | IGCM_debug_Exit "ncap2" |
---|
| 1702 | fi |
---|
| 1703 | |
---|
| 1704 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
| 1705 | } |
---|
| 1706 | |
---|
[451] | 1707 | function IGCM_sys_ncatted { |
---|
[544] | 1708 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 1709 | if ( $DEBUG_sys ) ; then |
---|
| 1710 | echo "IGCM_sys_ncatted :" $@ |
---|
| 1711 | fi |
---|
| 1712 | ncatted "$@" |
---|
| 1713 | if [ $? -gt 0 ] ; then |
---|
| 1714 | echo "IGCM_sys_ncatted : erreur ${@}." |
---|
| 1715 | IGCM_debug_Exit "ncatted" |
---|
| 1716 | fi |
---|
[451] | 1717 | |
---|
[544] | 1718 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
[451] | 1719 | } |
---|
| 1720 | |
---|
| 1721 | function IGCM_sys_ncbo { |
---|
[544] | 1722 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 1723 | if ( $DEBUG_sys ) ; then |
---|
| 1724 | echo "IGCM_sys_ncbo :" $@ |
---|
| 1725 | fi |
---|
| 1726 | ncbo $@ |
---|
| 1727 | if [ $? -gt 0 ] ; then |
---|
| 1728 | echo "IGCM_sys_ncbo : erreur ${@}." |
---|
| 1729 | IGCM_debug_Exit "ncbo" |
---|
| 1730 | fi |
---|
[451] | 1731 | |
---|
[544] | 1732 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
[451] | 1733 | } |
---|
| 1734 | |
---|
| 1735 | function IGCM_sys_ncdiff { |
---|
[544] | 1736 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 1737 | if ( $DEBUG_sys ) ; then |
---|
| 1738 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 1739 | fi |
---|
| 1740 | ncdiff $@ |
---|
| 1741 | if [ $? -gt 0 ] ; then |
---|
| 1742 | echo "IGCM_sys_ncdiff : erreur ${@}." |
---|
| 1743 | IGCM_debug_Exit "ncdiff" |
---|
| 1744 | fi |
---|
[451] | 1745 | |
---|
[544] | 1746 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
[451] | 1747 | } |
---|
| 1748 | |
---|
| 1749 | function IGCM_sys_ncea { |
---|
[544] | 1750 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 1751 | if ( $DEBUG_sys ) ; then |
---|
| 1752 | echo "IGCM_sys_ncea :" $@ |
---|
| 1753 | fi |
---|
| 1754 | ncea $@ |
---|
| 1755 | if [ $? -gt 0 ] ; then |
---|
| 1756 | echo "IGCM_sys_ncea : erreur ${@}." |
---|
| 1757 | IGCM_debug_Exit "ncea" |
---|
| 1758 | fi |
---|
[451] | 1759 | |
---|
[544] | 1760 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
[451] | 1761 | } |
---|
| 1762 | |
---|
| 1763 | function IGCM_sys_ncecat { |
---|
[544] | 1764 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 1765 | if ( $DEBUG_sys ) ; then |
---|
| 1766 | echo "IGCM_sys_ncecat :" $@ |
---|
| 1767 | fi |
---|
| 1768 | ncecat $@ |
---|
| 1769 | if [ $? -gt 0 ] ; then |
---|
| 1770 | echo "IGCM_sys_ncecat : erreur ${@}." |
---|
| 1771 | IGCM_debug_Exit "ncecat" |
---|
| 1772 | fi |
---|
[451] | 1773 | |
---|
[544] | 1774 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
[451] | 1775 | } |
---|
| 1776 | |
---|
| 1777 | function IGCM_sys_ncflint { |
---|
[544] | 1778 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 1779 | if ( $DEBUG_sys ) ; then |
---|
| 1780 | echo "IGCM_sys_ncflint :" $@ |
---|
| 1781 | fi |
---|
| 1782 | ncflint $@ |
---|
| 1783 | if [ $? -gt 0 ] ; then |
---|
| 1784 | echo "IGCM_sys_ncflint : erreur ${@}." |
---|
| 1785 | IGCM_debug_Exit "ncflint" |
---|
| 1786 | fi |
---|
[451] | 1787 | |
---|
[544] | 1788 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
[451] | 1789 | } |
---|
| 1790 | |
---|
| 1791 | function IGCM_sys_ncks { |
---|
[544] | 1792 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 1793 | if ( $DEBUG_sys ) ; then |
---|
| 1794 | echo "IGCM_sys_ncks :" $@ |
---|
| 1795 | fi |
---|
| 1796 | ncks $@ |
---|
| 1797 | if [ $? -gt 0 ] ; then |
---|
| 1798 | echo "IGCM_sys_ncks : erreur ${@}." |
---|
| 1799 | IGCM_debug_Exit "ncks" |
---|
| 1800 | fi |
---|
[451] | 1801 | |
---|
[544] | 1802 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
[451] | 1803 | } |
---|
| 1804 | |
---|
| 1805 | function IGCM_sys_ncpdq { |
---|
[544] | 1806 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 1807 | if ( $DEBUG_sys ) ; then |
---|
| 1808 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 1809 | fi |
---|
| 1810 | ncpdq $@ |
---|
| 1811 | if [ $? -gt 0 ] ; then |
---|
| 1812 | echo "IGCM_sys_ncpdq : erreur ${@}." |
---|
| 1813 | IGCM_debug_Exit "ncpdq" |
---|
| 1814 | fi |
---|
[451] | 1815 | |
---|
[544] | 1816 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
[451] | 1817 | } |
---|
| 1818 | |
---|
| 1819 | function IGCM_sys_ncra { |
---|
[544] | 1820 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 1821 | if ( $DEBUG_sys ) ; then |
---|
| 1822 | echo "IGCM_sys_ncra :" $@ |
---|
| 1823 | fi |
---|
| 1824 | ncra $@ |
---|
| 1825 | if [ $? -gt 0 ] ; then |
---|
| 1826 | echo "IGCM_sys_ncra : erreur ${@}." |
---|
| 1827 | IGCM_debug_Exit "ncra" |
---|
| 1828 | fi |
---|
[451] | 1829 | |
---|
[544] | 1830 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
[451] | 1831 | } |
---|
| 1832 | |
---|
| 1833 | function IGCM_sys_ncrcat { |
---|
[544] | 1834 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 1835 | if ( $DEBUG_sys ) ; then |
---|
| 1836 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 1837 | fi |
---|
[590] | 1838 | ncrcat --omp_num_threads 2 $@ |
---|
[544] | 1839 | if [ $? -gt 0 ] ; then |
---|
| 1840 | echo "IGCM_sys_ncrcat : erreur ${@}." |
---|
[451] | 1841 | # IGCM_debug_Exit "ncrcat" |
---|
[544] | 1842 | fi |
---|
[451] | 1843 | |
---|
[544] | 1844 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
[451] | 1845 | } |
---|
| 1846 | |
---|
| 1847 | function IGCM_sys_ncrename { |
---|
[544] | 1848 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 1849 | if ( $DEBUG_sys ) ; then |
---|
| 1850 | echo "IGCM_sys_ncrename :" $@ |
---|
| 1851 | fi |
---|
| 1852 | ncrename $@ |
---|
| 1853 | if [ $? -gt 0 ] ; then |
---|
| 1854 | echo "IGCM_sys_ncrename : erreur ${@}." |
---|
| 1855 | IGCM_debug_Exit "ncrename" |
---|
| 1856 | fi |
---|
[451] | 1857 | |
---|
[544] | 1858 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
[451] | 1859 | } |
---|
| 1860 | |
---|
| 1861 | function IGCM_sys_ncwa { |
---|
[544] | 1862 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 1863 | if ( $DEBUG_sys ) ; then |
---|
| 1864 | echo "IGCM_sys_ncwa :" $@ |
---|
| 1865 | fi |
---|
| 1866 | ncwa $@ |
---|
| 1867 | if [ $? -gt 0 ] ; then |
---|
| 1868 | echo "IGCM_sys_ncwa : erreur ${@}." |
---|
| 1869 | IGCM_debug_Exit "ncwa" |
---|
| 1870 | fi |
---|
[451] | 1871 | |
---|
[544] | 1872 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
[451] | 1873 | } |
---|
[544] | 1874 | |
---|
| 1875 | ############################################################## |
---|
| 1876 | # CDO OPERATOR |
---|
| 1877 | |
---|
| 1878 | function IGCM_sys_cdo { |
---|
| 1879 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
| 1880 | if ( $DEBUG_sys ) ; then |
---|
| 1881 | echo "IGCM_sys_cdo :" $@ |
---|
| 1882 | fi |
---|
| 1883 | \cdo $@ |
---|
| 1884 | if [ $? -gt 0 ] ; then |
---|
| 1885 | echo "IGCM_sys_cdo : erreur ${@}." |
---|
| 1886 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1887 | return 1 |
---|
| 1888 | else |
---|
| 1889 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1890 | return 0 |
---|
| 1891 | fi |
---|
| 1892 | |
---|
| 1893 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1894 | } |
---|