source: trunk/libIGCM/libIGCM_sys/libIGCM_sys_titane.ksh @ 590

Last change on this file since 590 was 590, checked in by sdipsl, 12 years ago
  • can extract needed restart from a tar (up to 20 minutes on titane)
    • still to do : introduce a lag when cleaning the restart buffer so that we don't look into the tar too often
    • still to do : work on the clean_month procedure
  • rebuild process submit pack_output process if needed
    • still to do : a pack_output able to submit create_ts/create_se if needed
  • bugfixes/cosmetics/cleaning
  • SX9 and titane OK.
  • Property svn:keywords set to Revision Author Date
File size: 51.2 KB
Line 
1#!/bin/ksh
2
3#**************************************************************
4# Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel
5# Contact: Arnaud.Caubel__at__lsce.ipsl.fr
6# $Revision::                                          $ Revision of last commit
7# $Author::                                            $ Author of last commit
8# $Date::                                              $ Date of last commit
9# IPSL (2006)
10#  This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC
11#
12#**************************************************************
13
14#=========================================================
15# The documentation of this file can be automatically generated
16# if you use the prefix #D- for comments to be extracted.
17# Extract with command: cat lib* | grep "^#D-" | cut -c "4-"
18#=========================================================
19
20#D-#==================================================
21#D-LibIGCM_sys for Titane
22#D-#==================================================
23#D-
24#D- This ksh library if a layer under some usefull
25#D-environment variables and shell commands.
26#D-All those definitions depend on host particularities.
27#D-It manages a stack mechanism and test validity of operations.
28#D-All function described bellow must be prefixed by IGCM_sys.
29
30#====================================================
31# libIGCM_sys PARAMETERS
32#====================================================
33
34#====================================================
35# set DEBUG_sys to true to output calls of function
36typeset -r DEBUG_sys=${DEBUG_sys:=true}
37
38#====================================================
39# Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get)
40typeset -r DRYRUN=${DRYRUN:=0}
41
42# YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE !
43# -------------------------------------------------------------------------------------
44# | DRYRUN=  |  Date computations, | sys_Get    |  Exe    | sys_Put_Out; sys_Put_Rest |
45# |          |  Cp/Exe param files |            |  Chmod  |                           |
46# |          |      Qsub           |            |         |                           |
47# -------------------------------------------------------------------------------------
48# |    0     |       yes           |    yes     |  yes    |      yes                  |
49# -------------------------------------------------------------------------------------
50# |    1     |       yes           |    yes     |  yes    |      no                   |
51# -------------------------------------------------------------------------------------
52# |    2     |       yes           |    yes     |  no     |      no                   |
53# -------------------------------------------------------------------------------------
54# |    3     |       yes           |    no      |  no     |      no                   |
55# -------------------------------------------------------------------------------------
56
57#=====================================================
58# Global Variables :
59#=====================================================
60# Language : "fr" or "en"
61typeset -r MYLANG="fr"
62
63#=====================================================
64# Host and user names
65# $hostname ou hostname
66typeset  HOST=${HOST:=$( hostname )}
67# $username ou whoami
68typeset  LOGIN=${LOGIN:=$( whoami )}
69# $hostname of the MASTER job
70typeset MASTER=titane
71
72#D-
73#D-#==================================================
74#D-Program used in libIGCM
75#D-#==================================================
76
77# rsync with path
78typeset -r RSYNC=/usr/bin/rsync
79# RSYNC_opt args to rsync
80typeset -r RSYNC_opt="-va"
81# ie storage filesystem
82typeset -r STOREHOST=${MASTER}
83
84#====================================================
85# Source default environment
86#====================================================
87. /etc/profile
88
89#====================================================
90# Set environment tools (ferret, nco, cdo)
91#====================================================
92. /home/cont003/p86ipsl/.atlas_env_titane_ksh
93
94module switch nco/3.9.4 nco/3.9.4_netcdf4
95
96#====================================================
97# Specific for ocean additionnal diagnostic
98export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO"
99export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET"
100
101#====================================================
102# Host specific DIRECTORIES
103#====================================================
104
105# ============ CESIUM START ============ #
106
107#====================================================
108#- Mirror libIGCM from titane to cesium if needed
109#ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' )
110#if [ ! ${ROOTSYS} = "home" ] ; then
111#  typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true}
112#else
113#  typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false}
114#fi
115
116#====================================================
117#- libIGCM_POST
118#if ( ${MirrorlibIGCM} ) ; then
119#  PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" )
120#  typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM
121#else
122#  typeset -r libIGCM_POST=${libIGCM}
123#fi
124
125# ============ CESIUM  END  ============ #
126
127#====================================================
128#- MirrorlibIGCM for frontend
129typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false}
130
131#====================================================
132#- libIGCM_POST for frontend
133typeset -r libIGCM_POST=${libIGCM}
134
135#====================================================
136#- R_EXE   (==> BIN_DIR = ${MODIPSL}/bin )
137typeset -r R_EXE="${MODIPSL}/bin"
138
139#====================================================
140#- SUBMIT_DIR : submission dir
141typeset SUBMIT_DIR=${SUBMIT_DIR:=${LS_SUBCWD}}
142
143#====================================================
144#- ARCHIVE (dedicated to large files)
145typeset -r ARCHIVE=${CCCSTOREDIR}
146
147#- ARCHIVE (dedicated to small/medium files)
148typeset -r STORAGE=${CCCWORKDIR}
149
150#====================================================
151#- IN
152typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM}
153typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/dmnfs/cont003/p24data}
154
155#====================================================
156#- R_OUT
157typeset -r R_OUT=${ARCHIVE}/IGCM_OUT
158
159#====================================================
160#- R_FIG (hosting figures : monitoring and atlas, and/or small files)
161typeset -r R_FIG=${STORAGE}/IGCM_OUT
162
163#====================================================
164#- R_BUF (ONLY FOR double copy an scratch)
165typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT
166
167#====================================================
168#- BIG_DIR : BIG_DIR to store files waiting for rebuild
169typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD}
170
171#====================================================
172#- OUT_POST
173typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT
174
175#====================================================
176#- RUN_DIR_PATH : Temporary working directory (=> TMP)
177if [ ! X${LSB_QUEUE} = Xmono ] ; then
178  typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${LSB_JOBID}}
179else
180  typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/TMPDIR_IGCM/${LSB_JOBID}}
181fi
182
183#====================================================
184#- HOST_MPIRUN_COMMAND
185typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time mpirun"}
186
187#====================================================
188#- Max number of arguments passed to nco operator or demigration command
189UNIX_MAX_LIMIT=360
190
191#D-#==================================================
192#D-function IGCM_sys_RshMaster
193#D-* Purpose: Connection to frontend machine.
194#D-* Examples:
195#D-
196function IGCM_sys_RshMaster {
197  IGCM_debug_PushStack "IGCM_sys_RshMaster" $@
198  /bin/ksh <<-EOF
199    export libIGCM=${libIGCM}
200    export DEBUG_debug=${DEBUG_debug}
201    . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh
202    . ${libIGCM}/libIGCM_card/libIGCM_card.ksh
203    ${@}
204EOF
205  if [ $? -gt 0 ] ; then
206    echo "IGCM_sys_RshMaster : erreur."
207    IGCM_debug_Exit "IGCM_sys_RshMaster"
208  fi
209  IGCM_debug_PopStack "IGCM_sys_RshMaster"
210}
211
212#D-#==================================================
213#D-function IGCM_sys_RshArchive
214#D-* Purpose: Archive rsh command
215#D-* Examples:
216#D-
217function IGCM_sys_RshArchive {
218  IGCM_debug_PushStack "IGCM_sys_RshArchive" $@
219  /bin/ksh <<-EOF
220    ${@}
221EOF
222  if [ $? -gt 0 ] ; then
223    echo "IGCM_sys_RshArchive : erreur."
224    IGCM_debug_Exit "IGCM_sys_RshArchive"
225  fi
226  IGCM_debug_PopStack "IGCM_sys_RshArchive"
227}
228
229#D-#==================================================
230#D-function IGCM_sys_RshPost
231#D-* Purpose: Post-process rsh command
232#D-* Examples:
233#D-
234function IGCM_sys_RshPost {
235  IGCM_debug_PushStack "IGCM_sys_RshPost" $@
236  if ( $DEBUG_sys ) ; then
237    echo "IGCM_sys_RshPost :" $@
238  fi
239
240  #echo cat tmp_IGCM_sys_RshPost_$$ INITIAL
241  #cat tmp_IGCM_sys_RshPost_$$
242  # keep standard input (stdin) for the loop onto temporary file
243  cat >tmp_IGCM_sys_RshPost_$$
244
245# ============ FRONTEND START ============ #
246
247  /bin/ksh <tmp_IGCM_sys_RshPost_$$
248  if [ $? -gt 0 ] ; then
249    echo "IGCM_sys_RshPost : erreur."
250    IGCM_debug_Exit "IGCM_sys_RshPost"
251  fi
252  # delete temporary file
253  \rm tmp_IGCM_sys_RshPost_$$
254
255# ============ FRONTEND  END  ============ #
256
257# ============ CESIUM START ============ #
258#  typeset NB_ESSAI DELAI status i
259#  if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then
260#    #little hack so that rebuild submission is done on titane not an cesium
261#   
262#    libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' )
263#    POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' )
264#    sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt
265#    sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$
266#    sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt
267#    sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$
268#    \mv tmp.txt tmp_IGCM_sys_RshPost_$$
269#   
270#    echo cat tmp_IGCM_sys_RshPost_$$ AFTER
271#    cat tmp_IGCM_sys_RshPost_$$
272#
273#    /bin/ksh <tmp_IGCM_sys_RshPost_$$
274#    if [ $? -gt 0 ] ; then
275#      echo "IGCM_sys_RshPost : erreur."
276#      IGCM_debug_Exit "IGCM_sys_RshPost"
277#    fi
278#    # delete temporary file
279#    \rm tmp_IGCM_sys_RshPost_$$
280#
281#  else
282#    # number of tentative
283#    NB_ESSAI=10
284#    # time delay between tentative
285#    DELAI=10
286#    i=0
287#    while [ $i -ne $NB_ESSAI ] ; do
288#      ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$
289#      status=$?
290#      if [ ${status} -ne 0 ];
291#      then
292#       sleep $DELAI
293#      else
294#       break
295#      fi
296#      let i=$i+1
297#    done
298#    # delete temporary file
299#    \rm tmp_IGCM_sys_RshPost_$$
300#
301#    if [ ${status} -gt 0 ] ; then
302#      echo "IGCM_sys_RshPost : erreur."
303#      IGCM_debug_Exit "IGCM_sys_RshPost"
304#    fi
305#  fi
306
307# ============ CESIUM  END  ============ #
308
309  IGCM_debug_PopStack "IGCM_sys_RshPost"
310}
311
312#D-#==================================================
313#D-function IGCM_sys_SendMail
314#D-* Purpose: Send mail when simulation is over
315#D-* Examples:
316#D-
317function IGCM_sys_SendMail {
318  IGCM_debug_PushStack "IGCM_sys_SendMail" $@
319  if ( $DEBUG_sys ) ; then
320    echo "IGCM_sys_SendMail :" $@
321  fi
322
323  if ( ${ExitFlag} ) ; then
324    status=failed
325  else
326    status=completed
327  fi
328
329    cat  << END_MAIL > job_end.mail
330Dear ${LOGIN},
331
332  Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`.
333  Job started : ${DateBegin}
334  Job ended   : ${DateEnd}
335  Output files are available in ${R_SAVE}
336  Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR}
337END_MAIL
338
339    if [ ! -z ${config_UserChoices_MailName} ] ; then
340        mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail
341    elif [ -f ~/.forward ] ; then
342        mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail
343    fi
344    sleep 10
345    rm -f job_end.mail
346
347  if [ $? -gt 0 ] ; then
348    echo "IGCM_sys_SendMail : erreur."
349    IGCM_debug_Exit "IGCM_sys_SendMail"
350  fi
351  IGCM_debug_PopStack "IGCM_sys_SendMail"
352}
353
354#D-#==================================================
355#D-function IGCM_sys_Mkdir
356#D-* Purpose: Master locale mkdir command
357#D-* Examples:
358#D-
359function IGCM_sys_Mkdir {
360  IGCM_debug_PushStack "IGCM_sys_Mkdir" $@
361  if ( $DEBUG_sys ) ; then
362    echo "IGCM_sys_Mkdir :" $@
363  fi
364  if [ ! -d ${1} ]; then
365    \mkdir -p $1
366    if [ $? -gt 0 ] ; then
367      echo "IGCM_sys_Mkdir : erreur."
368      IGCM_debug_Exit "IGCM_sys_Mkdir"
369    fi
370  fi
371  # vérification :
372  if [ ! -d ${1} ] ; then
373    echo "IGCM_sys_Mkdir : erreur."
374    IGCM_debug_Exit "IGCM_sys_Mkdir"
375  fi
376  IGCM_debug_PopStack "IGCM_sys_Mkdir"
377}
378
379#D-#==================================================
380#D-function IGCM_sys_MkdirArchive
381#D-* Purpose: Mkdir on Archive
382#D-* Examples:
383#D-
384function IGCM_sys_MkdirArchive {
385  IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@
386  if ( $DEBUG_sys ) ; then
387    echo "IGCM_sys_MkdirArchive :" $@
388  fi
389  #- creation de repertoire sur le serveur fichier
390  if [ ! -d ${1} ]; then 
391    \mkdir -p $1
392    if [ $? -gt 0 ] ; then
393      echo "IGCM_sys_MkdirArchive : erreur."
394      IGCM_debug_Exit "IGCM_sys_MkdirArchive"
395    fi
396  fi
397  IGCM_debug_PopStack "IGCM_sys_MkdirArchive"
398}
399
400#D-#==================================================
401#D-function IGCM_sys_MkdirWork
402#D-* Purpose: Mkdir on Work
403#D-* Examples:
404#D-
405function IGCM_sys_MkdirWork {
406  IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@
407  if ( $DEBUG_sys ) ; then
408    echo "IGCM_sys_MkdirWork :" $@
409  fi
410  #- creation de repertoire sur le serveur fichier
411  if [ ! -d ${1} ]; then 
412    \mkdir -p $1
413    if [ $? -gt 0 ] ; then
414      echo "IGCM_sys_MkdirWork : erreur."
415      IGCM_debug_Exit "IGCM_sys_MkdirWork"
416    fi
417  fi
418  IGCM_debug_PopStack "IGCM_sys_MkdirWork"
419}
420
421#D-#==================================================
422#D-function IGCM_sys_Cd
423#D-* Purpose: master cd command
424#D-* Examples:
425#D-
426function IGCM_sys_Cd {
427  IGCM_debug_PushStack "IGCM_sys_Cd" $@
428  if ( $DEBUG_sys ) ; then
429    echo "IGCM_sys_Cd :" $@
430  fi
431  \cd $1
432  if [ $? -gt 0 ] ; then
433    echo "IGCM_sys_Cd : erreur."
434    IGCM_debug_Exit "IGCM_sys_Cd"
435  fi
436  IGCM_debug_PopStack "IGCM_sys_Cd"
437}
438
439#D-#==================================================
440#D-function IGCM_sys_Chmod
441#D-* Purpose: Chmod
442#D-* Examples:
443#D-
444function IGCM_sys_Chmod {
445  IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@
446  if ( $DEBUG_sys ) ; then
447    echo "IGCM_sys_Chmod :" $@
448  fi
449  if [ $DRYRUN -le 1 ]; then
450    \chmod $@
451    if [ $? -gt 0 ] ; then
452      echo "IGCM_sys_Chmod : erreur."
453      IGCM_debug_Exit "IGCM_sys_Chmod"
454    fi
455  else
456    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
457  fi
458  IGCM_debug_PopStack "IGCM_sys_Chmod"
459}
460
461#D-#==================================================
462#D-function IGCM_sys_FileSize
463#D-* Purpose: Filesize
464#D-* Examples:
465#D-
466function IGCM_sys_FileSize {
467  IGCM_debug_PushStack "IGCM_sys_FileSize" $@
468
469  typeset sizeF
470  set +A sizeF -- $( ls -la ${1} )
471  if [ $? -gt 0 ] ; then
472    IGCM_debug_Exit "IGCM_sys_FileSize"
473  fi
474  eval ${2}=${sizeF[4]}
475
476  IGCM_debug_PopStack "IGCM_sys_FileSize"
477}
478
479#D-#==================================================
480#D-function IGCM_sys_TestDir
481#D-* Purpose: Test Directory that must exists
482#D-* Examples:
483#D-
484function IGCM_sys_TestDir {
485  IGCM_debug_PushStack "IGCM_sys_TestDir" $@
486  if ( $DEBUG_sys ) ; then
487    echo "IGCM_sys_TestDir :" $@
488  fi
489  typeset ExistFlag
490  ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 )
491  IGCM_debug_PopStack "IGCM_sys_TestDir"
492
493  return ${ExistFlag}
494}
495
496#D-#==================================================
497#D-function IGCM_sys_TestDirArchive
498#D-* Purpose: Test Directory that must exists on Archive
499#D-* Examples:
500#D-
501function IGCM_sys_TestDirArchive {
502  IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@
503  if ( $DEBUG_sys ) ; then
504    echo "IGCM_sys_TestDirArchive :" $@
505  fi
506  typeset ExistFlag
507  ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 )
508  IGCM_debug_PopStack "IGCM_sys_TestDirArchive"
509
510  return ${ExistFlag}
511}
512
513#D-#==================================================
514#D-function IGCM_sys_IsFileArchived
515#D-* Purpose: Test file that must NOT EXISTS on Archive
516#D-* Examples:
517#D-
518function IGCM_sys_IsFileArchived {
519  IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@
520  if ( $DEBUG_sys ) ; then
521    echo "IGCM_sys_IsFileArchived :" $@
522  fi
523  typeset IsArchivedFlag
524  IsArchivedFlag=$( [ X$( echo $1 | grep ^\/dmnfs ) != X ] && echo 0 || echo 1 )
525  IGCM_debug_PopStack "IGCM_sys_IsFileArchived"
526
527  return ${IsArchivedFlag}
528}
529
530#D-#==================================================
531#D-function IGCM_sys_TestFileArchive
532#D-* Purpose: Test file that must NOT EXISTS on Archive
533#D-* Examples:
534#D-
535function IGCM_sys_TestFileArchive {
536  IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@
537  if ( $DEBUG_sys ) ; then
538    echo "IGCM_sys_TestFileArchive :" $@
539  fi
540  typeset ExistFlag
541  ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 )
542  IGCM_debug_PopStack "IGCM_sys_TestFileArchive"
543
544  return ${ExistFlag}
545}
546
547#D-#==================================================
548#D-function IGCM_sys_TestFileBuffer
549#D-* Purpose: Test file that must NOT EXISTS on Buffer
550#D-* Examples:
551#D-
552function IGCM_sys_TestFileBuffer {
553  IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@
554  typeset ExistFlag
555  ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 )
556  IGCM_debug_PopStack "IGCM_sys_TestFileBuffer"
557
558  return ${ExistFlag}
559}
560
561#D-#==================================================
562#D-function IGCM_sys_CountFileArchive
563#D-* Purpose: Count files on Archive filesystem
564#D-* Examples:
565#D-
566function IGCM_sys_CountFileArchive {
567  IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@
568  ls ${@} 2>/dev/null | wc -l
569  if [ $? -gt 0 ] ; then
570    echo "IGCM_sys_CountFileArchive : erreur."
571  fi
572  IGCM_debug_PopStack "IGCM_sys_CountFileArchive"
573}
574
575#D-#==================================================
576#D-function IGCM_sys_CountFileBuffer
577#D-* Purpose: Count files on Scratch filesystem
578#D-* Examples:
579#D-
580function IGCM_sys_CountFileBuffer {
581  IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@
582  ls ${@} 2>/dev/null | wc -l
583  if [ $? -gt 0 ] ; then
584    echo "IGCM_sys_CountFileBuffer : erreur."
585  fi
586  IGCM_debug_PopStack "IGCM_sys_CountFileBuffer"
587}
588
589#D-#==================================================
590#D-function IGCM_sys_Tree
591#D-* Purpose: Tree directories with files on ${ARCHIVE}
592#D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT}
593#D-
594function IGCM_sys_Tree {
595  IGCM_debug_PushStack "IGCM_sys_Tree" $@
596  if ( $DEBUG_sys ) ; then
597    echo "IGCM_sys_Tree :" $@
598  fi
599
600  \ls -lR ${@}
601
602  IGCM_debug_PopStack "IGCM_sys_Tree"
603}
604
605#D-#==================================================
606#D-function IGCM_sys_Tar
607#D-* Purpose: master tar command
608#D-* Examples:
609#D-
610function IGCM_sys_Tar {
611  IGCM_debug_PushStack "IGCM_sys_Tar" $@
612  if ( $DEBUG_sys ) ; then
613    echo "IGCM_sys_Tar :" $@
614  fi
615  \tar cf $@
616  if [ $? -gt 0 ] ; then
617    echo "IGCM_sys_Tar : erreur."
618    IGCM_debug_Exit "IGCM_sys_Tar"
619  fi
620  IGCM_debug_PopStack "IGCM_sys_Tar"
621}
622
623#D-#==================================================
624#D-function IGCM_sys_UnTar
625#D-* Purpose: master un-tar command
626#D-* Examples:
627#D-
628function IGCM_sys_UnTar {
629  IGCM_debug_PushStack "IGCM_sys_UnTar" $@
630  if ( $DEBUG_sys ) ; then
631    echo "IGCM_sys_UnTar :" $@
632  fi
633  \tar xvf $1
634  if [ $? -gt 0 ] ; then
635    echo "IGCM_sys_UnTar : erreur."
636    IGCM_debug_Exit "IGCM_sys_UnTar"
637  fi
638  IGCM_debug_PopStack "IGCM_sys_UnTar"
639}
640
641#D-#==================================================
642#D-function IGCM_sys_Qsub
643#D-* Purpose: Qsub new job
644#D-* Examples:
645#D-
646function IGCM_sys_Qsub {
647  IGCM_debug_PushStack "IGCM_sys_Qsub" $@
648  if ( $DEBUG_sys ) ; then
649    echo "IGCM_sys_Qsub :" $@
650  fi
651  typeset options
652  if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then
653    options=" -o ${Script_Output} -e ${Script_Output}"
654  else
655    options=" -o ${Script_Output} -e ${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}"
656  fi
657
658  /usr/local/bin/ccc_msub ${options} < $1
659  if [ $? -gt 0 ] ; then
660    echo "IGCM_sys_Qsub : erreur ${options} $1"
661    IGCM_debug_Exit "IGCM_sys_Qsub"
662  fi
663  IGCM_debug_PopStack "IGCM_sys_Qsub"
664}
665
666#D-#==================================================
667#D-function IGCM_sys_QsubPost
668#D-* Purpose: Qsub new job on scalaire
669#D-* Examples:
670#D-
671function IGCM_sys_QsubPost {
672  IGCM_debug_PushStack "IGCM_sys_QsubPost" $@
673  if ( $DEBUG_sys ) ; then
674    echo "IGCM_sys_QsubPost :" $@
675  fi
676
677  # Need to export listVarEnv for cesium
678  # NO Need to export listVarEnv for titane
679# ============ FRONTEND START ============ #
680
681  /usr/local/bin/ccc_msub -p ${BRIDGE_MSUB_PROJECT} -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job
682
683# ============ FRONTEND  END  ============ #
684
685# ============ CESIUM START ============ #
686#  typeset NB_ESSAI DELAI status i
687#  # number of tentative
688#  NB_ESSAI=10
689#  # time delay between tentative
690#  DELAI=10
691#  (( i = 0 ))
692#  while [ $i -lt $NB_ESSAI ] ; do
693#    /usr/local/bin/ccc_msub -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job
694#    status=$?
695#    if [ ${status} -gt 0 ]; then
696#      sleep $DELAI
697#    else
698#      break
699#    fi
700#    (( i = i + 1 ))
701#  done
702# ============ CESIUM  END  ============ #
703
704  if [ $? -gt 0 ] ; then
705    echo "IGCM_sys_QsubPost : erreur " $@
706    IGCM_debug_Exit "IGCM_sys_QsubPost"
707  fi
708  IGCM_debug_PopStack "IGCM_sys_QsubPost"
709}
710
711#D-*************************
712#D- File transfer functions
713#D-*************************
714#D-
715
716#D-#==================================================
717#D-function IGCM_sys_Rsync_out
718#D-* Purpose: treat return val of rsync
719#D-* Examples: IGCM_sys_Rsync_out out_RET_rsync
720#D-  Error values and explanations can depend on your system version.
721function IGCM_sys_Rsync_out {
722  RET=$1
723  if [ ! $RET ] ; then
724    echo "rsync error !"
725  fi
726
727  if [ $MYLANG = "fr" ]; then
728    case $RET in
729    0)  return ;;
730    1)  echo "Erreur de rsync ; RERR_SYNTAX : "
731      echo "Erreur de syntaxe ou d'utilisation."
732      return;;
733    2)  echo "Erreur de rsync ; RERR_PROTOCOL : "
734      echo "Incompatibilité de protocole."
735      return;;
736    3)  echo "Erreur de rsync ; RERR_FILESELECT 3"
737      echo "Erreurs  lors  de  la  sélection des fichiers d'entrée sortie et"
738      echo "répertoires"
739      return;;
740    4)  echo "Erreur de rsync ; RERR_UNSUPPORTED"
741      echo "Action demandée non supportée : une tentative de manipulation de"
742      echo "fichiers  64-bits  sur une plate-forme qui ne les supporte pas a"
743      echo "été faite ; ou une option qui est supportée par le  client  mais"
744      echo "pas par le serveur a été spécifiée."
745      return;;
746    10) echo "Erreur de rsync ; RERR_SOCKETIO"
747      echo "Erreur dans le socket d'entrée sortie"
748      return;;
749    11) echo "Erreur de rsync ; RERR_FILEIO"
750      echo "Erreur d'entrée sortie fichier"
751      return;;
752    12) echo "Erreur de rsync ; RERR_STREAMIO"
753      echo "Erreur dans flux de donnée du protocole rsync"
754      return;;
755    13) echo "Erreur de rsync ; RERR_MESSAGEIO"
756      echo "Erreur avec les diagnostics du programme"
757      return;;
758    14) echo "Erreur de rsync ; RERR_IPC"
759      echo "Erreur dans le code IPC"
760      return;;
761    20) echo "Erreur de rsync ; RERR_SIGNAL"
762      echo "SIGUSR1 ou SIGINT reçu"
763      return;;
764    21) echo "Erreur de rsync ; RERR_WAITCHILD"
765      echo "Une erreur retournée par waitpid()"
766      return;;
767    22) echo "Erreur de rsync ; RERR_MALLOC"
768      echo "Erreur lors de l'allocation des tampons de mémoire de coeur"
769      return;;
770    23) echo ""
771      echo "Erreur fichier inexistant"
772      return;;
773    30) echo "Erreur de rsync ; RERR_TIMEOUT"
774      echo "Temps d'attente écoulé dans l'envoi/réception de données"
775      return;;
776    *)  echo "Erreur de rsync : code de retour de rsync inconnu :" $RET
777      return;;
778    esac
779  elif [ $MYLANG = "en" ] ; then
780    case $RET in
781    0)  return;;               
782    1)  echo "rsync error : Syntax or usage error "
783      return;;
784    2)  echo "rsync error : Protocol incompatibility "
785      return;;
786    3)  echo "rsync error : Errors selecting input/output files, dirs"
787      return;;
788    4)  echo "rsync error : Requested action not supported: an attempt"
789      echo "was made to manipulate 64-bit files on a platform that cannot support"
790      echo "them; or an option was specified that is supported by the client and"
791      echo "not by the server."
792      return;;
793    5)  echo "rsync error : Error starting client-server protocol"
794      return;;
795    10) echo "rsync error : Error in socket I/O "
796      return;;
797    11) echo "rsync error : Error in file I/O "
798      return;;
799    12) echo "rsync error : Error in rsync protocol data stream "
800      return;;
801    13) echo "rsync error : Errors with program diagnostics "
802      return;;
803    14) echo "rsync error : Error in IPC code "
804      return;;
805    20) echo "rsync error : Received SIGUSR1 or SIGINT "
806      return;;
807    21) echo "rsync error : Some error returned by waitpid() "
808      return;;
809    22) echo "rsync error : Error allocating core memory buffers "
810      return;;
811    23) echo "rsync error : Partial transfer due to error"
812      return;;
813    24) echo "rsync error : Partial transfer due to vanished source files"
814      return;;
815    30) echo "rsync error : Timeout in data send/receive "
816      return;;
817    *)  echo "rsync error : return code of rsync unknown :" $RET
818      return;;
819    esac
820  else
821    echo "unknown language $MYLANG."
822    return
823  fi
824}
825
826#D-#==================================================
827#D-function IGCM_sys_Miror_libIGCM
828#D-* Purpose: Mirror libIGCM PATH and lib to cesium
829#D-* Examples:
830#D-
831function IGCM_sys_Mirror_libIGCM {
832  IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM"
833  if ( $DEBUG_sys ) ; then
834    echo "IGCM_sys_Mirror_libIGCM"
835  fi
836
837  typeset RET DEST
838
839  mkdir -p ${HOME}/MIRROR/${PATHlibIGCM}
840
841  echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1
842  ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1
843  RET=$?
844
845  if [ ${RET} -gt 0 ] ; then
846    echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium."
847    cat out_rsync
848  fi
849  IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM"
850}
851
852#====================================================
853#- Call IGCM_sys_Mirror_libIGCM now !
854if ( $MirrorlibIGCM ) ; then
855  IGCM_sys_Mirror_libIGCM
856fi
857
858#D-#==================================================
859#D-function IGCM_sys_Cp
860#D-* Purpose: generic cp
861#D-* Examples:
862#D-
863function IGCM_sys_Cp {
864  IGCM_debug_PushStack "IGCM_sys_Cp" $@
865  if ( $DEBUG_sys ) ; then
866    echo "IGCM_sys_Cp :" $@
867  fi
868
869  typeset RET
870
871  echo cp $@ > out_rsync 2>&1
872  \cp $@ >> out_rsync 2>&1
873  RET=$?
874
875  if [ ${RET} -gt 0 ] ; then
876    echo "IGCM_sys_Cp : error."
877    cat out_rsync
878    IGCM_debug_Exit "IGCM_sys_Cp"
879  else
880    \rm out_rsync
881  fi
882  IGCM_debug_PopStack "IGCM_sys_Cp"
883}
884
885#D-#==================================================
886#D-function IGCM_sys_Rm
887#D-* Purpose: generic rm
888#D-* Examples:
889#D-
890function IGCM_sys_Rm {
891  IGCM_debug_PushStack "IGCM_sys_Rm" -- $@
892  if ( $DEBUG_sys ) ; then
893    echo "IGCM_sys_Rm :" $@
894  fi
895
896  typeset RET
897
898  echo rm $@ > out_rsync 2>&1
899  \rm $@ >> out_rsync 2>&1
900  RET=$?
901
902  if [ ${RET} -gt 0 ] ; then
903    echo "IGCM_sys_Rm : error."
904    cat out_rsync
905    IGCM_debug_Exit "IGCM_sys_Rm"
906  else
907    \rm out_rsync
908  fi
909  IGCM_debug_PopStack "IGCM_sys_Rm"
910}
911
912#D-#==================================================
913#D-function IGCM_sys_RmRunDir
914#D-* Purpose: rm tmpdir (dummy function most of the time batch
915#D-                      scheduler will do the job)
916#D-* Examples:
917#D-
918function IGCM_sys_RmRunDir {
919  IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@
920  if ( $DEBUG_sys ) ; then
921    echo "IGCM_sys_RmRunDir :" $@
922  fi
923
924  typeset RET
925
926  echo rm $@ > out_rsync 2>&1
927  \rm $@ >> out_rsync 2>&1
928  RET=$?
929
930  if [ ${RET} -gt 0 ] ; then
931    echo "IGCM_sys_RmRunDir : error."
932    cat out_rsync
933    IGCM_debug_Exit "IGCM_sys_RmRunDir"
934  else
935    \rm out_rsync
936  fi
937  IGCM_debug_PopStack "IGCM_sys_RmRunDir"
938}
939
940#D-#==================================================
941#D-function IGCM_sys_Mv
942#D-* Purpose: generic move
943#D-* Examples:
944#D-
945function IGCM_sys_Mv {
946  IGCM_debug_PushStack "IGCM_sys_Mv" $@
947  if ( $DEBUG_sys ) ; then
948    echo "IGCM_sys_Mv :" $@
949  fi
950
951  if [ $DRYRUN = 0 ]; then
952
953    typeset RET
954   
955    echo mv $@ > out_rsync 2>&1
956    \mv $@ >> out_rsync 2>&1
957    RET=$?
958   
959    if [ ${RET} -gt 0 ] ; then
960      echo "IGCM_sys_Mv : error in mv."
961      cat out_rsync
962      IGCM_debug_Exit "IGCM_sys_Mv"
963    else
964      \rm out_rsync
965    fi
966  else
967    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
968  fi
969
970  IGCM_debug_PopStack "IGCM_sys_Mv"
971}
972
973#D-#==================================================
974#D-function IGCM_sys_Put_Dir
975#D-* Purpose: Copy a complete directory on $(ARCHIVE)
976#D-* Examples:
977#D-
978function IGCM_sys_Put_Dir {
979  IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@
980  if ( $DEBUG_sys ) ; then
981    echo "IGCM_sys_Put_Dir :" $@
982  fi
983  if [ $DRYRUN = 0 ]; then
984    if [ ! -d ${1} ] ; then
985      echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ."
986      IGCM_debug_PopStack "IGCM_sys_Put_Dir"
987      return
988    fi
989
990    typeset RET
991
992    # Only if we use rsync
993    #IGCM_sys_TestDirArchive $( dirname $2 )
994    #
995    #USUAL WAY
996    \cp -r $1 $2 > out_rsync 2>&1
997    RET=$?
998
999    if [ ${RET} -gt 0 ] ; then
1000      echo "IGCM_sys_Put_Dir : error."
1001      cat out_rsync
1002      IGCM_debug_Exit "IGCM_sys_Put_Dir"
1003    else
1004      \rm out_rsync
1005    fi
1006  else
1007    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1008  fi
1009  IGCM_debug_PopStack "IGCM_sys_Put_Dir"
1010}
1011
1012#D-#==================================================
1013#D-function IGCM_sys_Get_Dir
1014#D-* Purpose: Copy a complete directory from ${ARCHIVE}
1015#D-* Examples:
1016#D-
1017function IGCM_sys_Get_Dir {
1018  IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@
1019  if ( $DEBUG_sys ) ; then
1020    echo "IGCM_sys_Get_Dir :" $@
1021  fi
1022  if [ $DRYRUN = 0 ]; then
1023#    if [ ! -d ${1} ] ; then
1024#      echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ."
1025#      IGCM_debug_PopStack "IGCM_sys_Get_Dir"
1026#      return
1027#    fi
1028
1029    typeset RET
1030
1031    # Only if we use rsync
1032    #IGCM_sys_TestDirArchive $( dirname $2 )
1033    #
1034    # USUAL WAY
1035    # add dmfind/dmget (to demigrate all offline files) :
1036    #dmfind $1 -state MIG -o -state OFL -o -state PAR | dmget
1037    \cp -r $1 $2 > out_rsync 2>&1
1038    RET=$?
1039
1040    if [ ${RET} -gt 0 ] ; then
1041      echo "IGCM_sys_Get_Dir : error."
1042      cat out_rsync
1043      IGCM_debug_Exit "IGCM_sys_Get_Dir"
1044    else
1045      \rm out_rsync
1046    fi
1047  else
1048    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1049  fi
1050  IGCM_debug_PopStack "IGCM_sys_Get_Dir"
1051}
1052
1053#D-#==================================================
1054#D-function IGCM_sys_Get_Master
1055#D-* Purpose: Copy a complete directory from MASTER filesystem
1056#D-* Examples:
1057#D-
1058function IGCM_sys_Get_Master {
1059  IGCM_debug_PushStack "IGCM_sys_Get_Master" $@
1060  if ( $DEBUG_sys ) ; then
1061    echo "IGCM_sys_Get_Master :" $@
1062  fi
1063  if [ $DRYRUN = 0 ]; then
1064    if [ ! -d ${1} ] ; then
1065      echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ."
1066      IGCM_debug_PopStack "IGCM_sys_Get_Master"
1067      return
1068    fi
1069
1070    typeset RET
1071
1072    #USUAL WAY
1073    \cp -r $1 $2 > out_rsync 2>&1
1074    RET=$?
1075
1076    if [ ${RET} -gt 0 ] ; then
1077      echo "IGCM_sys_Get_Master : error."
1078      cat out_rsync
1079      IGCM_debug_Exit "IGCM_sys_Get_Master"
1080    else
1081      \rm out_rsync
1082    fi
1083  else
1084    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1085  fi
1086  IGCM_debug_PopStack "IGCM_sys_Get_Master"
1087}
1088
1089#D-#==================================================
1090#D-function IGCM_sys_Put_Rest
1091#D-* Purpose: Put computied restarts on ${ARCHIVE}.
1092#D-           File and target directory must exist.
1093#D-* Examples:
1094#D-
1095function IGCM_sys_Put_Rest {
1096  IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@
1097  if ( $DEBUG_sys ) ; then
1098    echo "IGCM_sys_Put_Rest :" $@
1099  fi
1100  if [ $DRYRUN = 0 ]; then
1101    if [ ! -f ${1} ] ; then
1102      echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ."
1103      IGCM_debug_Exit "IGCM_sys_Put_Rest"
1104    fi
1105
1106    typeset RET
1107    #
1108    if [ X${JobType} = XRUN ] ; then
1109      IGCM_sys_Chmod 444 ${1}
1110    fi
1111
1112    #
1113    # USUAL WAY
1114    \cp $1 $2 > out_rsync 2>&1
1115    RET=$?
1116
1117#       #RSYNC WITH NETWORK SSH CALL
1118#       echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1
1119#       ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1
1120
1121#       #RSYNC WITH NFS USE
1122#       echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
1123#       ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1
1124
1125#       RET=$?
1126#       IGCM_sys_Rsync_out $RET
1127
1128#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
1129#       (( RET=RET+$? ))
1130
1131    if [ ${RET} -gt 0 ] ; then
1132      echo "IGCM_sys_Put_Rest : error."
1133      cat out_rsync
1134      IGCM_debug_Exit "IGCM_sys_Put_Rest"
1135    else
1136      \rm out_rsync
1137    fi
1138  else
1139    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1140  fi
1141  IGCM_debug_PopStack "IGCM_sys_Put_Rest"
1142}
1143
1144#D-#==================================================
1145#D-function IGCM_sys_PutBuffer_Rest
1146#D-* Purpose: Put computied restarts on ${SCRATCHDIR}.
1147#D-           File and target directory must exist.
1148#D-* Examples:
1149#D-
1150function IGCM_sys_PutBuffer_Rest {
1151  IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@
1152  if ( $DEBUG_sys ) ; then
1153    echo "IGCM_sys_PutBuffer_Rest :" $@
1154  fi
1155  if [ $DRYRUN = 0 ]; then
1156    if [ ! -f ${1} ] ; then
1157      echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ."
1158      IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest"
1159    fi
1160
1161    typeset RET
1162    #
1163    if [ X${JobType} = XRUN ] ; then
1164      IGCM_sys_Chmod 444 ${1}
1165    fi
1166
1167    #
1168    # USUAL WAY
1169    \cp $1 $2 > out_rsync 2>&1
1170    RET=$?
1171
1172    if [ ${RET} -gt 0 ] ; then
1173      echo "IGCM_sys_PutBuffer_Rest : error."
1174      cat out_rsync
1175      IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest"
1176    else
1177      \rm out_rsync
1178    fi
1179  else
1180    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1181  fi
1182  IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest"
1183}
1184
1185#D-#==================================================
1186#D-function IGCM_sys_Put_Out
1187#D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly
1188#D-* Examples:
1189#D-
1190function IGCM_sys_Put_Out {
1191  IGCM_debug_PushStack "IGCM_sys_Put_Out" $@
1192  if ( $DEBUG_sys ) ; then
1193    echo "IGCM_sys_Put_Out :" $@
1194  fi
1195  if [ $DRYRUN = 0 ]; then
1196    if [ ! -f ${1} ] ; then
1197      echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ."
1198      IGCM_debug_PopStack "IGCM_sys_Put_Out"
1199      return 1
1200    fi
1201    #
1202    IGCM_sys_MkdirArchive $( dirname $2 )
1203    #
1204    typeset RET
1205
1206    #=====================================================
1207    #         COMMENT OUT DOUBLE COPY ON SCRATCHDIR
1208    #=====================================================
1209
1210    #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1
1211    #if [ $? -eq 0 ] ; then
1212    #    typeset WORKPATH FILEPATH
1213    #    WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" )
1214    #    IGCM_sys_MkdirWork ${WORKPATH}
1215    #    FILEPATH=${WORKPATH}/$( basename $2 )
1216    #    #
1217    #    IGCM_sys_Cp ${1} ${FILEPATH}
1218    #fi
1219
1220    if [ X${JobType} = XRUN ] ; then
1221      if [ X${3} = X ] ; then
1222        IGCM_sys_Chmod 444 ${1}
1223      fi
1224    fi
1225    #
1226    # USUAL WAY
1227    \cp $1 $2 > out_rsync 2>&1
1228    RET=$?
1229
1230#       #RSYNC WITH NETWORK SSH CALL
1231#       echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1
1232#       ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1
1233
1234#       #RSYNC WITH NFS USE
1235#       echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1
1236#       ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1
1237
1238#       RET=$?
1239#       IGCM_sys_Rsync_out $RET
1240
1241#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
1242#       (( RET=RET+$? ))
1243
1244    if [ ${RET} -gt 0 ] ; then
1245      echo "IGCM_sys_Put_Out : error."
1246      cat out_rsync
1247      IGCM_debug_Exit "IGCM_sys_Put_Out"
1248    else
1249      \rm out_rsync
1250    fi
1251  else
1252    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1253  fi
1254  IGCM_debug_PopStack "IGCM_sys_Put_Out"
1255  return 0
1256}
1257
1258#D-#==================================================
1259#D-function IGCM_sys_PutBuffer_Out
1260#D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly
1261#D-* Examples:
1262#D-
1263function IGCM_sys_PutBuffer_Out {
1264  IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@
1265  if ( $DEBUG_sys ) ; then
1266    echo "IGCM_sys_PutBuffer_Out :" $@
1267  fi
1268  if [ $DRYRUN = 0 ]; then
1269    if [ ! -f ${1} ] ; then
1270      echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ."
1271      IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out"
1272      return 1
1273    fi
1274    #
1275    IGCM_sys_Mkdir $( dirname $2 )
1276    #
1277    typeset RET
1278
1279    if [ X${JobType} = XRUN ] ; then
1280      if [ X${3} = X ] ; then
1281        IGCM_sys_Chmod 444 ${1}
1282      fi
1283    fi
1284    #
1285    # USUAL WAY
1286    \cp $1 $2 > out_rsync 2>&1
1287    RET=$?
1288
1289    if [ ${RET} -gt 0 ] ; then
1290      echo "IGCM_sys_PutBuffer_Out : error."
1291      cat out_rsync
1292      IGCM_debug_Exit "IGCM_sys_PutBuffer_Out"
1293    else
1294      \rm out_rsync
1295    fi
1296  else
1297    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1298  fi
1299  IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out"
1300  return 0
1301}
1302
1303#D-#==================================================
1304#D-function IGCM_sys_Get
1305#D-* Purpose: Get a file from ${ARCHIVE}
1306#D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX
1307#D-            IGCM_sys_Get /l Array_contain_myfiles /destpath/
1308function IGCM_sys_Get {
1309  IGCM_debug_PushStack "IGCM_sys_Get" $@
1310
1311  typeset DEST RET dm_liste ifile target file_work
1312
1313  if ( $DEBUG_sys ) ; then
1314    echo "IGCM_sys_Get :" $@
1315  fi
1316  if [ $DRYRUN -le 2 ]; then
1317    if [ X${1} = X'/l' ] ; then
1318      # test if the first file is present in the old computation :
1319      eval set +A dm_liste \${${2}}
1320    else
1321      eval set +A dm_liste ${1}
1322    fi
1323    eval DEST=\${${#}}
1324
1325    #=====================================================
1326    #         COMMENT OUT DOUBLE COPY ON SCRATCHDIR
1327    #=====================================================
1328
1329    # Is it an R_OUT file (not R_IN) ?
1330    #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1
1331    #if [ $? -eq 0 ] ; then
1332    #    # Yes  ? then we try to get it in SCRATCHDIR
1333    #    set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" )
1334    #    if [ -f ${file_work[0]} ] ; then
1335    #   IGCM_sys_Cp ${file_work[*]} ${DEST}
1336    #   IGCM_debug_PopStack "IGCM_sys_Get"
1337    #   return
1338    #    fi
1339    #fi
1340
1341    # test if the (first) file is present in the old computation :
1342    IGCM_sys_TestFileArchive ${dm_liste[0]}
1343    RET=$?
1344    if [ ${RET} -gt 0 ] ; then
1345      echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ."
1346      IGCM_debug_Exit "IGCM_sys_Get"
1347    fi
1348
1349    #dmget ${dm_liste[*]} > out_rsync 2>&1
1350    ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1
1351    RET=$?
1352    if [ ${RET} -gt 0 ] ; then
1353      echo "WARNING IGCM_sys_Get : demigration error."
1354      cat out_rsync
1355      echo "WARNING IGCM_sys_Get : will stop later if the cp fails."
1356    fi
1357
1358    #if [ ${RET} -gt 0 ] ; then
1359    #    if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then
1360    #   cat out_rsync
1361    #   echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : "
1362    #   sleep 30
1363    #   echo "We try another time"
1364    ##  dmget ${dm_liste[*]} > out_rsync 2>&1
1365    #   ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1
1366    #   RET=$?
1367    #   if [ ${RET} -gt 0 ] ; then
1368    #       echo "ERROR IGCM_sys_Get : again demigration error :"
1369    #       cat out_rsync
1370    #       IGCM_debug_Exit "IGCM_sys_Get"
1371    #   fi
1372    #    else
1373    #   echo "ERROR IGCM_sys_Get : demigration error :"
1374    #   cat out_rsync
1375    #   IGCM_debug_Exit "IGCM_sys_Get"
1376    #    fi
1377    #fi
1378
1379    #USUAL WAY
1380    if [ X${1} = X'/l' ] ; then
1381      (( RET=0 ))
1382      for target in ${dm_liste[*]} ; do
1383        local_file=$( basename ${target} )
1384        \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1
1385        (( RET = RET + $? ))
1386      done
1387    else
1388      \cp ${dm_liste} ${DEST} >> out_rsync 2>&1
1389      RET=$?
1390    fi
1391
1392#       #RSYNC WITH NETWORK SSH CALL
1393#       echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1
1394#       ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1
1395
1396#       #RSYNC WITH NFS USE
1397#       echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1
1398#       ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1
1399
1400#       RET=$?
1401#       IGCM_sys_Rsync_out $RET
1402
1403#       ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync
1404#       (( RET=RET+$? ))
1405
1406    if [ ${RET} -gt 0 ] ; then
1407      echo "IGCM_sys_Get : copy error."
1408      cat out_rsync
1409      IGCM_debug_Exit "IGCM_sys_Get"
1410    else
1411      \rm out_rsync
1412    fi
1413  else
1414    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1415  fi
1416  IGCM_debug_PopStack "IGCM_sys_Get"
1417}
1418
1419#D-#==================================================
1420#D-function IGCM_sys_GetBuffer
1421#D-* Purpose: Get a file from ${SCRATCHDIR}
1422#D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX
1423#D-            IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/
1424function IGCM_sys_GetBuffer {
1425  IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@
1426
1427  typeset DEST RET buf_liste ifile target file_work
1428
1429  if ( $DEBUG_sys ) ; then
1430    echo "IGCM_sys_GetBuffer :" $@
1431  fi
1432  if [ $DRYRUN -le 2 ]; then
1433    if [ X${1} = X'/l' ] ; then
1434      # test if the first file is present in the old computation :
1435      eval set +A buf_liste \${${2}}
1436    else
1437      eval set +A buf_liste ${1}
1438    fi
1439    eval DEST=\${${#}}
1440
1441    #USUAL WAY
1442    if [ X${1} = X'/l' ] ; then
1443      (( RET=0 ))
1444      for target in ${buf_liste[*]} ; do
1445        local_file=$( basename ${target} )
1446        \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1
1447        (( RET = RET + $? ))
1448      done
1449    else
1450      \cp ${buf_liste} ${DEST} >> out_rsync 2>&1
1451      RET=$?
1452    fi
1453
1454    if [ ${RET} -gt 0 ] ; then
1455      echo "IGCM_sys_GetBuffer : copy error."
1456      cat out_rsync
1457      IGCM_debug_Exit "IGCM_sys_GetBuffer"
1458    else
1459      \rm out_rsync
1460    fi
1461  else
1462    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1463  fi
1464  IGCM_debug_PopStack "IGCM_sys_GetBuffer"
1465}
1466
1467#D-#==================================================
1468#D-function IGCM_sys_GetDate_FichWork
1469#D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK
1470#D-* Examples:
1471#D-
1472function IGCM_sys_GetDate_FichWork {
1473  IGCM_debug_PushStack "IGCM_sys_FichWork" $@
1474  if ( $DEBUG_sys ) ; then
1475    echo "IGCM_sys_GetDate_FichWork :" $@
1476  fi
1477  typeset dateF
1478  set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} )
1479  eval ${2}=${dateF[5]}
1480
1481    # donne la date filesys d'un fichier sur la machine work
1482  IGCM_debug_PopStack "IGCM_sys_FichWork"
1483}
1484
1485#D-#==================================================
1486#D-function IGCM_sys_GetDate_FichArchive
1487#D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE
1488#D-* Examples:
1489#D-
1490function IGCM_sys_GetDate_FichArchive {
1491  IGCM_debug_PushStack "IGCM_sys_FichArchive" $@
1492  if ( $DEBUG_sys ) ; then
1493    echo "IGCM_sys_GetDate_FichArchive :" $@
1494  fi
1495  typeset dateF
1496  set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} )
1497  eval ${2}=${dateF[5]}
1498
1499  IGCM_debug_PopStack "IGCM_sys_FichArchive"
1500}
1501
1502#D-#==================================================
1503#D-function IGCM_sys_Dods_Rm
1504#D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole.
1505#D-* Examples:
1506#D-
1507function IGCM_sys_Dods_Rm {
1508  if ( $DEBUG_sys ) ; then
1509    echo "IGCM_sys_Dods_Rm :" $@
1510  fi
1511  typeset RET
1512  RET=0
1513  if [ $DRYRUN = 0 ]; then
1514    if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then
1515      echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ."
1516      echo "Nothing has been done."
1517      return
1518    fi
1519    dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1
1520    RET=$?
1521   
1522#       if [ ${RET} -gt 0 ] ; then
1523#           echo "IGCM_sys_Dods_Rm : error."
1524#           cat out_dods_rm
1525#           IGCM_debug_Exit "IGCM_sys_Dods_Rm"
1526#       else
1527#           rm out_dods_rm
1528#       fi
1529
1530  else
1531    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1532  fi
1533  return $RET
1534}
1535
1536#D-#==================================================
1537#D-function IGCM_sys_Dods_Cp
1538#D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole.
1539#D-* Examples:
1540#D-
1541function IGCM_sys_Dods_Cp {
1542  if ( $DEBUG_sys ) ; then
1543    echo "IGCM_sys_Dods_Cp :" $@
1544  fi
1545  typeset RET
1546  RET=0
1547  if [ $DRYRUN = 0 ]; then
1548    if [ ! -d ${R_SAVE}/${1} ] ; then
1549      echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ."
1550      echo "Nothing has been done."
1551      return
1552    fi
1553    #
1554    dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1
1555    RET=$?
1556
1557#       if [ ${RET} -gt 0 ] ; then
1558#           echo "IGCM_sys_Dods_Cp : error."
1559#           cat out_dods_cp
1560#           IGCM_debug_Exit "IGCM_sys_Dods_Cp"
1561#       else
1562#           rm out_dods_cp
1563#       fi
1564
1565  else
1566    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1567  fi
1568  return $RET
1569}
1570
1571#D-#==================================================
1572#D-function IGCM_sys_Put_Dods
1573#D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole.
1574#D-* Examples:
1575#D-
1576function IGCM_sys_Put_Dods {
1577  IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@
1578  if ( $DEBUG_sys ) ; then
1579    echo "IGCM_sys_Put_Dods :" $@
1580  fi
1581  typeset RET
1582  if [ $DRYRUN = 0 ]; then
1583    if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then
1584      echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should."
1585      echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST."
1586      echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST."
1587      IGCM_debug_PopStack "IGCM_sys_Put_Dods"
1588      return
1589    fi
1590
1591    if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then
1592      echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should."
1593      echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS."
1594      echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS."
1595      IGCM_debug_PopStack "IGCM_sys_Put_Dods"
1596      return
1597    fi
1598    #
1599    if [ -d ${R_SAVE}/${1} ] ; then
1600      cd ${R_SAVE}
1601    elif [ -d ${R_FIGR}/${1} ] ; then
1602      cd ${R_FIGR}
1603    fi
1604
1605    IGCM_sys_Dods_Rm ${1}
1606    IGCM_sys_Dods_Cp ${1}
1607    RET=0
1608   
1609    if [ ${RET} -gt 0 ] ; then
1610      echo "IGCM_sys_Put_Dods : error."
1611      IGCM_debug_Exit "IGCM_sys_Put_Dods"
1612    fi
1613  else
1614    ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack
1615  fi
1616  IGCM_debug_PopStack "IGCM_sys_Put_Dods"
1617}
1618
1619##############################################################
1620# REBUILD OPERATOR
1621
1622function IGCM_sys_rebuild {
1623  IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@
1624  if ( $DEBUG_sys ) ; then
1625    echo "IGCM_sys_rebuild :" $@
1626  fi
1627  /home/cont003/p86ipsl/X64/bin/rebuild -f -o $@
1628  if [ $? -gt 0 ] ; then
1629    echo "IGCM_sys_rebuild : erreur ${@}."
1630    IGCM_debug_Exit "rebuild"
1631  fi
1632
1633  IGCM_debug_PopStack "IGCM_sys_rebuild"
1634}
1635
1636############################################################
1637# Activate Running Environnment Variables
1638
1639function IGCM_sys_activ_variables {
1640  IGCM_debug_PushStack "IGCM_sys_activ_variables"
1641  if ( $DEBUG_sys ) ; then
1642    echo "IGCM_sys_activ_variables"
1643  fi
1644  ulimit -s 2097152
1645  IGCM_debug_PopStack "IGCM_sys_activ_variables"
1646}
1647
1648############################################################
1649# Desactivate Running Environnment Variables
1650
1651function IGCM_sys_desactiv_variables {
1652  IGCM_debug_PushStack "IGCM_sys_desactiv_variables"
1653  if ( $DEBUG_sys ) ; then
1654    echo "IGCM_sys_desactiv_variables"
1655  fi
1656  IGCM_debug_PopStack "IGCM_sys_desactiv_variables"
1657}
1658
1659############################################################
1660# Build run file
1661
1662function IGCM_sys_build_run_file {
1663  IGCM_debug_PushStack "IGCM_sys_build_run_file" $@
1664  if ( $DEBUG_sys ) ; then
1665    echo "IGCM_sys_build_run_file " $@
1666  fi
1667
1668  # set Number of processors for OCE here
1669  NUM_PROC_OCE=5
1670
1671  (( NUM_PROC_ATM = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE - 1))
1672  (( nb_tot_m1    = $BATCH_NUM_PROC_TOT - NUM_PROC_OCE ))
1673  if [ $1 = MPI1 ]; then
1674    cat <<EOF > run_file
1675-np 1 ./oasis
1676-np ${NUM_PROC_ATM} ./lmdz.x
1677-np ${NUM_PROC_OCE} ./opa.xx
1678EOF
1679    config_UserChoices_JobRunOptions='"--app"'
1680    IGCM_sys_Chmod u+x run_file
1681  fi
1682  IGCM_debug_PopStack "IGCM_sys_build_run_file"
1683 
1684}
1685
1686##############################################################
1687# NCO OPERATOR
1688
1689function IGCM_sys_ncap2 {
1690  IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@
1691  if ( $DEBUG_sys ) ; then
1692    echo "IGCM_sys_ncap2 :" $@
1693  fi
1694  ncap2 "$@"
1695  if [ $? -gt 0 ] ; then
1696    echo "IGCM_sys_ncap2 : erreur ${@}."
1697    IGCM_debug_Exit "ncap2"
1698  fi
1699
1700  IGCM_debug_PopStack "IGCM_sys_ncap2"
1701}
1702
1703function IGCM_sys_ncatted {
1704  IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@
1705  if ( $DEBUG_sys ) ; then
1706    echo "IGCM_sys_ncatted :" $@
1707  fi
1708  ncatted "$@"
1709  if [ $? -gt 0 ] ; then
1710    echo "IGCM_sys_ncatted : erreur ${@}."
1711    IGCM_debug_Exit "ncatted"
1712  fi
1713
1714  IGCM_debug_PopStack "IGCM_sys_ncatted"
1715}
1716
1717function IGCM_sys_ncbo {
1718  IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@
1719  if ( $DEBUG_sys ) ; then
1720    echo "IGCM_sys_ncbo :" $@
1721  fi
1722  ncbo $@
1723  if [ $? -gt 0 ] ; then
1724    echo "IGCM_sys_ncbo : erreur ${@}."
1725    IGCM_debug_Exit "ncbo"
1726  fi
1727
1728  IGCM_debug_PopStack "IGCM_sys_ncbo"
1729}
1730
1731function IGCM_sys_ncdiff {
1732  IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@
1733  if ( $DEBUG_sys ) ; then
1734    echo "IGCM_sys_ncdiff :" $@
1735  fi
1736  ncdiff $@
1737  if [ $? -gt 0 ] ; then
1738    echo "IGCM_sys_ncdiff : erreur ${@}."
1739    IGCM_debug_Exit "ncdiff"
1740  fi
1741
1742  IGCM_debug_PopStack "IGCM_sys_ncdiff"
1743}
1744
1745function IGCM_sys_ncea {
1746  IGCM_debug_PushStack "IGCM_sys_ncea" -- $@
1747  if ( $DEBUG_sys ) ; then
1748    echo "IGCM_sys_ncea :" $@
1749  fi
1750  ncea $@
1751  if [ $? -gt 0 ] ; then
1752    echo "IGCM_sys_ncea : erreur ${@}."
1753    IGCM_debug_Exit "ncea"
1754  fi
1755
1756  IGCM_debug_PopStack "IGCM_sys_ncea"
1757}
1758
1759function IGCM_sys_ncecat {
1760  IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@
1761  if ( $DEBUG_sys ) ; then
1762    echo "IGCM_sys_ncecat :" $@
1763  fi
1764  ncecat $@
1765  if [ $? -gt 0 ] ; then
1766    echo "IGCM_sys_ncecat : erreur ${@}."
1767    IGCM_debug_Exit "ncecat"
1768  fi
1769
1770  IGCM_debug_PopStack "IGCM_sys_ncecat"
1771}
1772
1773function IGCM_sys_ncflint {
1774  IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@
1775  if ( $DEBUG_sys ) ; then
1776    echo "IGCM_sys_ncflint :" $@
1777  fi
1778  ncflint $@
1779  if [ $? -gt 0 ] ; then
1780    echo "IGCM_sys_ncflint : erreur ${@}."
1781    IGCM_debug_Exit "ncflint"
1782  fi
1783
1784  IGCM_debug_PopStack "IGCM_sys_ncflint"
1785}
1786
1787function IGCM_sys_ncks {
1788  IGCM_debug_PushStack "IGCM_sys_ncks" -- $@
1789  if ( $DEBUG_sys ) ; then
1790    echo "IGCM_sys_ncks :" $@
1791  fi
1792  ncks $@
1793  if [ $? -gt 0 ] ; then
1794    echo "IGCM_sys_ncks : erreur ${@}."
1795    IGCM_debug_Exit "ncks"
1796  fi
1797
1798  IGCM_debug_PopStack "IGCM_sys_ncks"
1799}
1800
1801function IGCM_sys_ncpdq {
1802  IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@
1803  if ( $DEBUG_sys ) ; then
1804    echo "IGCM_sys_ncpdq :" $@
1805  fi
1806  ncpdq $@
1807  if [ $? -gt 0 ] ; then
1808    echo "IGCM_sys_ncpdq : erreur ${@}."
1809    IGCM_debug_Exit "ncpdq"
1810  fi
1811
1812  IGCM_debug_PopStack "IGCM_sys_ncpdq"
1813}
1814
1815function IGCM_sys_ncra {
1816  IGCM_debug_PushStack "IGCM_sys_ncra" -- $@
1817  if ( $DEBUG_sys ) ; then
1818    echo "IGCM_sys_ncra :" $@
1819  fi
1820  ncra $@
1821  if [ $? -gt 0 ] ; then
1822    echo "IGCM_sys_ncra : erreur ${@}."
1823    IGCM_debug_Exit "ncra"
1824  fi
1825
1826  IGCM_debug_PopStack "IGCM_sys_ncra"
1827}
1828
1829function IGCM_sys_ncrcat {
1830  IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@
1831  if ( $DEBUG_sys ) ; then
1832    echo "IGCM_sys_ncrcat :" $@
1833  fi
1834  ncrcat --omp_num_threads 2 $@
1835  if [ $? -gt 0 ] ; then
1836    echo "IGCM_sys_ncrcat : erreur ${@}."
1837#       IGCM_debug_Exit "ncrcat"
1838  fi
1839
1840  IGCM_debug_PopStack "IGCM_sys_ncrcat"
1841}
1842
1843function IGCM_sys_ncrename {
1844  IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@
1845  if ( $DEBUG_sys ) ; then
1846    echo "IGCM_sys_ncrename :" $@
1847  fi
1848  ncrename $@
1849  if [ $? -gt 0 ] ; then
1850    echo "IGCM_sys_ncrename : erreur ${@}."
1851    IGCM_debug_Exit "ncrename"
1852  fi
1853
1854  IGCM_debug_PopStack "IGCM_sys_ncrename"
1855}
1856
1857function IGCM_sys_ncwa {
1858  IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@
1859  if ( $DEBUG_sys ) ; then
1860    echo "IGCM_sys_ncwa :" $@
1861  fi
1862  ncwa $@
1863  if [ $? -gt 0 ] ; then
1864    echo "IGCM_sys_ncwa : erreur ${@}."
1865    IGCM_debug_Exit "ncwa"
1866  fi
1867
1868  IGCM_debug_PopStack "IGCM_sys_ncwa"
1869}
1870
1871##############################################################
1872# CDO OPERATOR
1873
1874function IGCM_sys_cdo {
1875  IGCM_debug_PushStack "IGCM_sys_cdo" -- $@
1876  if ( $DEBUG_sys ) ; then
1877    echo "IGCM_sys_cdo :" $@
1878  fi
1879  \cdo $@
1880  if [ $? -gt 0 ] ; then
1881    echo "IGCM_sys_cdo : erreur ${@}."
1882    IGCM_debug_PopStack "IGCM_sys_cdo"
1883    return 1
1884  else
1885    IGCM_debug_PopStack "IGCM_sys_cdo"
1886    return 0
1887  fi
1888
1889  IGCM_debug_PopStack "IGCM_sys_cdo"
1890}
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