Ignore:
Timestamp:
06/03/24 15:18:06 (5 weeks ago)
Author:
jgipsl
Message:

Update all experiments using ORCHIDEE_4 according to settings choosen in offline mode by ORCHIDEE project groupe.

  • All experiements follow the set up accoring to the TRENDY protocol: changes in nitrogen input files and vegetation file
  • update parameter files for ORCHIDEE_4 according to changes in offline setup
  • added new experiments for ORCHIDEE_4 LMDZOR/clim_pdControl.orch4 and IPSLCM-reg/piControl_TEST.orch4
Location:
CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP
Files:
3 edited

Legend:

Unmodified
Added
Removed

  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/dynamico.card

    r6838 r6870  
    1616# If guided_type=nudging, add nudging files(u.nc, v.nc, hur.nc,...) in BoundaryFiles section below 
    1717guided_type=none 
     18 
    1819 
    1920[InitialStateFiles] 

  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/orchidee.card

    r6855 r6870  
    1919# ROUTING=standard   => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=standard 
    2020# ROUTING=simple     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=simple 
     21# ROUTING=native     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=native (note: routing_simple.nc is used also for this case) 
    2122# ROUTING=off        => in orchidee.def RIVER_ROUTING=n  
    2223ROUTING=simple 
    … …  
    2728# output_level_filename=12    : highest level which will output all variables 
    2829# output_level_filename=NONE  : deactivate the file 
    29 output_level_sechiba_history = 11 
     30output_level_sechiba_history = 2 
    3031output_level_sechiba_out_2 = NONE 
    3132output_level_sechiba_history_4dim = NONE 
    3233 
    33 # Specify output frequency for each file [1y, 1mo, 1d, 3h, 1h, 1ts] 
     34# Specify output frequency for each file [1y, 1mo, 1d, 10800s, 1ts] 
    3435# Settings using WriteFrequency in config.card is not longer used 
    3536output_freq_sechiba_history = 1mo 
    3637output_freq_sechiba_out_2 = 1d 
    37 output_freq_sechiba_history_4dim = 1d 
    38  
     38output_freq_sechiba_history_4dim = 1mo 
    3939 
    4040[InitialStateFiles] 
    41 List=   (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soils_param.nc ), \ 
    42         (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc ), \ 
    43         (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
    44         (${R_IN}/SRF/reftemp4.nc, reftemp.nc ), \ 
    45         (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc) 
     41List=       (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
     42            (${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc, soils_param.nc), \ 
     43            (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
     44            (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc), \ 
     45            (${R_IN}/SRF/reftemp4.nc, reftemp.nc), \ 
     46            (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_1700.nc, PFTmap.nc) 
    4647 
    4748[BoundaryFiles] 
    48 List= () 
    49 ListNonDel= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2/PFTmap_1850.nc, PFTmap.nc),\ 
    50             (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    51  
     49List=   () 
     50ListNonDel= (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    5251 
    5352[SmoothFiles] 
    … …  
    5554 
    5655[ParametersFiles] 
    57 List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
     56List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
    5857        (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4, orchidee_pft.def) ,\ 
    59         (${SUBMIT_DIR}/PARAM/ORCHIDEE/ping_orchidee.xml, . )               ,\ 
    60         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .) ,\ 
     58        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
    6159        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
    62         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
    63         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
    64         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
     60        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
     61        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
     62        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
    6563 
    6664[RestartFiles] 
    67 List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc),\ 
    68         (routing_restart.nc, routing_restart.nc, routing_start.nc) 
     65List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
     66        (routing_restart.nc, routing_restart.nc, routing_start.nc) 
    6967 
    7068[OutputText] 
    71 List=   (out_orchidee*, orchidee.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_routing_orchidee.xml, context_input_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
     69List=   (out_orchidee*, orchidee.def, orchidee_pft.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, context_routing_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
    7270 
    7371[OutputFiles] 
    74 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
    75         (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
    76         (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
     72List=   (sechiba_history.nc,      ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
     73        (sechiba_history_4dim.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
     74        (sechiba_out_2.nc,        ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
    7775        (ORCHIDEE_interp_diag.nc, ${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc, NONE), \ 
    78         (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc,  NONE) 
     76        (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE), \ 
     77        (diag_routing.nc,         ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc, NONE),\ 
     78        (diag_routing_r.nc,       ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc, NONE) 
     79 
    7980 
    8081[Post_1M_sechiba_history] 

  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/stomate.card

    r6479 r6870  
    33 
    44[UserChoices] 
    5  
    65# NINPUT_UPDATE=1Y: change in nitrogen input maps every year.  
    76# Nitrogen input maps should be set in BoundaryFiles/List for 1Y or in InitialStateFile for 0Y. 
    … …  
    1211# If STOMATE_IMPOSE_CN=n the other N-input files are needed, see commented files below 
    1312STOMATE_IMPOSE_CN=n 
    14  
    1513 
    1614# Specify output level for output files 
    … …  
    2725output_freq_stomate_ipcc_history = 1mo 
    2826 
    29  
    3027[InitialStateFiles] 
    31 # cnleaf_map.nc is needed if STOMATE_IMPOSE_CN=y 
    32 #List=    (${R_IN}/SRF/NITROGEN/CN_LEAF/cn_leaf_1850_v0.nc, cnleaf_map.nc) 
    33  
    34 # Following files are needed if STOMATE_IMPOSE_CN=n 
    35 List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_pasture_1900.nc, nfert_pasture.nc) ,\ 
    36      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_cropland_1900.nc, nfert_cropland.nc) ,\ 
    37      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_pasture_1900.nc, nmanure_pasture.nc) ,\ 
    38      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_cropland_1900.nc, nmanure_cropland.nc) ,\ 
    39      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_nhx_1900.nc, ndep_nhx.nc), \ 
    40      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_noy_1900.nc, ndep_noy.nc), \ 
    41      (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    42  
     28List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_nh4_1850.nc, Nfert_ammo_cropland.nc) ,\ 
     29        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_no3_1850.nc, Nfert_nitr_cropland.nc) ,\ 
     30        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_nh4_1850.nc,  Nfert_ammo_pasture.nc) ,\ 
     31        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_no3_1850.nc,  Nfert_nitr_pasture.nc) ,\ 
     32        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/nhx__1850.nc, Nammonium.nc), \ 
     33        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/noy__1850.nc, Nnitrate.nc), \ 
     34        (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    4335 
    4436[BoundaryFiles] 
    45 List=   () 
     37List= () 
    4638ListNonDel= () 
    4739 
    … …  
    6052[OutputFiles] 
    6153List=   (stomate_history.nc,      ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc,      Post_1M_stomate_history),    \ 
    62         (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history) 
     54        (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history), \ 
     55        (stomate_history_4dim.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history_4dim.nc, NONE), \ 
     56        (stomate_fixed_dia.nc, ${R_OUT_SBG_O_Y}/${PREFIX}_1Y_stomate_fixed_dia.nc, NONE) 
    6357 
    64 [Post_1M_stomate_history] 
    65 Patches = () 
    66 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    67 TimeSeriesVars2D = (CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE,WOOD_HARVEST) 
     58[Post_1Y_stomate_history] 
     59Patches= () 
     60GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     61TimeSeriesVars2D= (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,FLUX_PROD_S_LCC_c,FLUX_PROD_M_LCC_c,FLUX_PROD_L_LCC_c,FLUX_PROD_S_HARVEST_c,FLUX_PROD_M_HARVEST_c,FLUX_PROD_L_HARVEST_c) 
    6862ChunckJob2D = NONE 
    69 TimeSeriesVars3D = (VEGET_COV_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,WOOD_HARVEST_PFT) 
     63TimeSeriesVars3D= (LAI_MEAN,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M_n,TOTAL_M_c,TOTAL_BM_LITTER_c,TOTAL_BM_LITTER_n,ADAPTATION,REGENERATION,SOIL_ACTIVE_c,SOIL_ACTIVE_n,SOIL_SLOW_c,SOIL_SLOW_n,SOIL_PASSIVE_c,SOIL_PASSIVE_n,SOIL_SURF_c,SOIL_SURF_n,LITTER_STR_AB_c,LITTER_STR_AB_n,LITTER_STR_BE_c,LITTER_STR_BE_n,LITTER_MET_AB_c,LITTER_MET_AB_n,LITTER_MET_BE_c,LITTER_MET_BE_n,LITTER_WOD_AB_c,LITTER_WOD_AB_n,LITTER_WOD_BE_c,LITTER_WOD_BE_n,TOTAL_TURN_c,TOTAL_TURN_n,LEAF_M_n,LEAF_M_c,N_UPTAKE_NO3,N_UPTAKE_NH4,NH3_EMISSION,N2_EMISSION,N2O_EMISSION,NOX_EMISSION,NBP_pool_c,NBP_flux_c,MBC_NBP1_c,MBC_NBP1_n,MBC_NBP2_c,MBC_NBP2_n) 
    7064ChunckJob3D = NONE 
    71 Seasonal = ON 
     65Seasonal=ON 
    7266 
    73 [Post_1M_stomate_ipcc_history] 
    74 Patches = () 
    75 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    76 TimeSeriesVars2D = (cProduct, lai, gpp, ra, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, cMassVariation, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep, fWoodharvest, cVegCrop, cLitterCrop, cSoilCrop, nppCrop, raCrop) 
     67[Post_1Y_stomate_ipcc_history] 
     68Patches= () 
     69GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     70TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, cMassVariation, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp_c, nbp_n, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep_c, nep_n, fWoodharvest) 
    7771ChunckJob2D = NONE 
    78 TimeSeriesVars3D = () 
     72TimeSeriesVars3D=() 
    7973ChunckJob3D = NONE 
    80 Seasonal = ON 
     74Seasonal=ON 
     75 
Note: See TracChangeset for help on using the changeset viewer.