Changeset 6870


Ignore:
Timestamp:
06/03/24 15:18:06 (4 weeks ago)
Author:
jgipsl
Message:

Update all experiments using ORCHIDEE_4 according to settings choosen in offline mode by ORCHIDEE project groupe.

  • All experiements follow the set up accoring to the TRENDY protocol: changes in nitrogen input files and vegetation file
  • update parameter files for ORCHIDEE_4 according to changes in offline setup
  • added new experiments for ORCHIDEE_4 LMDZOR/clim_pdControl.orch4 and IPSLCM-reg/piControl_TEST.orch4
Location:
CONFIG/UNIFORM/v7/IPSLCM7
Files:
1 deleted
13 edited
4 copied

Legend:

Unmodified
Added
Removed
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/ICOLMDZOR/clim_pdControl.orch4/COMP/orchidee.card

    r6855 r6870  
    1919# ROUTING=standard   => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=standard 
    2020# ROUTING=simple     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=simple 
     21# ROUTING=native     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=native (note: routing_simple.nc is used also for this case) 
    2122# ROUTING=off        => in orchidee.def RIVER_ROUTING=n  
    2223ROUTING=simple 
     
    2728# output_level_filename=12    : highest level which will output all variables 
    2829# output_level_filename=NONE  : deactivate the file 
    29 output_level_sechiba_history = 11 
     30output_level_sechiba_history = 2 
    3031output_level_sechiba_out_2 = NONE 
    31 output_level_sechiba_history_4dim = 11 
     32output_level_sechiba_history_4dim = NONE 
    3233 
    33 # Specify output frequency for each file [1y, 1mo, 1d, 3h, 1h, 1ts] 
     34# Specify output frequency for each file [1y, 1mo, 1d, 10800s, 1ts] 
    3435# Settings using WriteFrequency in config.card is not longer used 
    3536output_freq_sechiba_history = 1mo 
    36 output_freq_sechiba_out_2 = 3h 
     37output_freq_sechiba_out_2 = 1d 
    3738output_freq_sechiba_history_4dim = 1mo 
    3839 
    39  
    4040[InitialStateFiles] 
    41 List=   (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soils_param.nc ), \ 
    42         (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc ), \ 
    43         (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
    44         (${R_IN}/SRF/reftemp4.nc, reftemp.nc ), \ 
    45         (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc) 
     41List=       (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
     42            (${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc, soils_param.nc), \ 
     43            (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
     44            (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc), \ 
     45            (${R_IN}/SRF/reftemp4.nc, reftemp.nc), \ 
     46            (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_2000.nc, PFTmap.nc) 
    4647 
    4748[BoundaryFiles] 
    48 List= () 
    49 ListNonDel= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2/PFTmap_2000.nc, PFTmap.nc),\ 
    50             (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
     49List=   () 
     50ListNonDel= (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    5151 
    5252[SmoothFiles] 
     
    5454 
    5555[ParametersFiles] 
    56 List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
     56List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
    5757        (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4, orchidee_pft.def) ,\ 
    58         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
    59         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
    60         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
    61         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
    62         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
     58        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
     59        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
     60        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
     61        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
     62        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
    6363 
    6464[RestartFiles] 
    65 List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
     65List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
    6666        (routing_restart.nc, routing_restart.nc, routing_start.nc) 
    6767 
    6868[OutputText] 
    69 List=   (out_orchidee*, orchidee.def, used_orchidee.def, iodef.xml, context_orchidee.xml, context_routing_orchidee.xml, context_input_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
     69List=   (out_orchidee*, orchidee.def, orchidee_pft.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, context_routing_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
    7070 
    7171[OutputFiles] 
    72 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
    73         (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
    74         (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
     72List=   (sechiba_history.nc,      ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
     73        (sechiba_history_4dim.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
     74        (sechiba_out_2.nc,        ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
    7575        (ORCHIDEE_interp_diag.nc, ${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc, NONE), \ 
    76         (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc,  NONE) 
     76        (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE), \ 
     77        (diag_routing.nc,         ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc, NONE),\ 
     78        (diag_routing_r.nc,       ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc, NONE) 
     79 
    7780 
    7881[Post_1M_sechiba_history] 
    7982Patches = () 
    8083GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) 
    81 TimeSeriesVars2D = (nobiofrac, alb_nir, alb_vis, evap, fluxlat, fluxsens, netrad, qair, rain, runoff, snow, snownobio, snowf, frac_snow, subli, tair, temp_sol, tsol_max, tsol_min, drainage,mrsos, mrso, mrros, mrro, prveg, evspsblveg, evspsblsoi, tran, treeFrac, grassFrac, cropFrac, baresoilFrac, residualFrac, TWBR, riverflow, coastalflow, DelSoilMoist_daily, DelIntercept_daily, DelSWE_daily, delstock_routing_daily, snowmelt, LAImean, transpir, evapnu) 
     84TimeSeriesVars2D = (nobiofrac, alb_nir, alb_vis, evap, fluxlat, fluxsens, rain, runoff, snow, snownobio, snowf, frac_snow, subli, tair, temp_sol, drainage, mrsos, mrso, TWBR, riverflow, coastalflow, DelSoilMoist_daily, DelIntercept_daily, DelSWE_daily, delstock_routing_daily, LAImean, transpir, evapnu, lwdown, swdown, gppCrop, rhCrop) 
    8285ChunckJob2D = NONE 
    83 TimeSeriesVars3D = (lai, maxvegetfrac, vegetfrac, ptn, nee) 
     86TimeSeriesVars3D = (lai, maxvegetfrac, vegetfrac, nee, gpp, growth_resp, hetero_resp, humrel, inter, maint_resp, npp, precisol) 
    8487ChunckJob3D = NONE 
    8588Seasonal = ON 
     
    8891Patches = () 
    8992GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) 
    90 TimeSeriesVars2D = (mrsos, mrro) 
    91 ChunckJob2D = 50Y 
    92 TimeSeriesVars3D = (ptn) 
    93 ChunckJob3D = 10Y 
     93TimeSeriesVars2D = () 
     94ChunckJob2D = NONE 
     95TimeSeriesVars3D = (snowdz, snowtemp, snowrho) 
     96ChunckJob3D = NONE 
    9497Seasonal = OFF 
    9598 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/ICOLMDZOR/clim_pdControl.orch4/COMP/stomate.card

    r6406 r6870  
    1212STOMATE_IMPOSE_CN=n 
    1313 
    14  
    1514# Specify output level for output files 
    1615# Only the files stomate_history.nc and stomate_ipcc_history.nc can be set here. 
    1716# output_level_filname=0     : lowest level writing only variables needed for the monitoring 
    18 # output_level_filname=10    : highest level which will output all variables 
     17# output_level_filname=1     : highest level which will output all variables 
    1918# output_level_filname=NONE  : deactivate the file 
    20 output_level_stomate_history = 10 
    21 output_level_stomate_ipcc_history = 1 
     19output_level_stomate_history = 0  
     20output_level_stomate_ipcc_history = 0 
    2221 
    2322# Specify output frequency for each file [1y, 1mo, 1d] 
     
    2625output_freq_stomate_ipcc_history = 1mo 
    2726 
    28  
    2927[InitialStateFiles] 
    30 # cnleaf_map.nc is needed if STOMATE_IMPOSE_CN=y 
    31 #List=    (${R_IN}/SRF/NITROGEN/CN_LEAF/cn_leaf_1850_v0.nc, cnleaf_map.nc) 
    32  
    33 # Following files are needed if STOMATE_IMPOSE_CN=n 
    34 List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_pasture_2000.nc, nfert_pasture.nc) ,\ 
    35      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_cropland_2000.nc, nfert_cropland.nc) ,\ 
    36      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_pasture_2000.nc, nmanure_pasture.nc) ,\ 
    37      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_cropland_2000.nc, nmanure_cropland.nc) ,\ 
    38      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_nhx_2000.nc, ndep_nhx.nc), \ 
    39      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_noy_2000.nc, ndep_noy.nc), \ 
    40      (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
     28List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_nh4_2000.nc, Nfert_ammo_cropland.nc) ,\ 
     29        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_no3_2000.nc, Nfert_nitr_cropland.nc) ,\ 
     30        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_nh4_2000.nc,  Nfert_ammo_pasture.nc) ,\ 
     31        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_no3_2000.nc,  Nfert_nitr_pasture.nc) ,\ 
     32        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/nhx__2000.nc, Nammonium.nc), \ 
     33        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/noy__2000.nc, Nnitrate.nc), \ 
     34        (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    4135 
    4236[BoundaryFiles] 
    43 List=   () 
     37List= () 
    4438ListNonDel= () 
    4539 
     
    5852[OutputFiles] 
    5953List=   (stomate_history.nc,      ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc,      Post_1M_stomate_history),    \ 
    60         (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history) 
     54        (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history), \ 
     55        (stomate_history_4dim.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history_4dim.nc, NONE), \ 
     56        (stomate_fixed_dia.nc, ${R_OUT_SBG_O_Y}/${PREFIX}_1Y_stomate_fixed_dia.nc, NONE) 
    6157 
    62 [Post_1M_stomate_history] 
    63 Patches = () 
    64 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    65 TimeSeriesVars2D = (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE) 
     58[Post_1Y_stomate_history] 
     59Patches= () 
     60GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     61TimeSeriesVars2D= (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,FLUX_PROD_S_LCC_c,FLUX_PROD_M_LCC_c,FLUX_PROD_L_LCC_c,FLUX_PROD_S_HARVEST_c,FLUX_PROD_M_HARVEST_c,FLUX_PROD_L_HARVEST_c) 
    6662ChunckJob2D = NONE 
    67 TimeSeriesVars3D = (LAI,VEGET_COV_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,AGE,HEIGHT,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,CO2_FIRE,TOTAL_TURN,WOOD_HARVEST_PFT) 
     63TimeSeriesVars3D= (LAI_MEAN,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M_n,TOTAL_M_c,TOTAL_BM_LITTER_c,TOTAL_BM_LITTER_n,ADAPTATION,REGENERATION,SOIL_ACTIVE_c,SOIL_ACTIVE_n,SOIL_SLOW_c,SOIL_SLOW_n,SOIL_PASSIVE_c,SOIL_PASSIVE_n,SOIL_SURF_c,SOIL_SURF_n,LITTER_STR_AB_c,LITTER_STR_AB_n,LITTER_STR_BE_c,LITTER_STR_BE_n,LITTER_MET_AB_c,LITTER_MET_AB_n,LITTER_MET_BE_c,LITTER_MET_BE_n,LITTER_WOD_AB_c,LITTER_WOD_AB_n,LITTER_WOD_BE_c,LITTER_WOD_BE_n,TOTAL_TURN_c,TOTAL_TURN_n,LEAF_M_n,LEAF_M_c,N_UPTAKE_NO3,N_UPTAKE_NH4,NH3_EMISSION,N2_EMISSION,N2O_EMISSION,NOX_EMISSION,NBP_pool_c,NBP_flux_c,MBC_NBP1_c,MBC_NBP1_n,MBC_NBP2_c,MBC_NBP2_n) 
    6864ChunckJob3D = NONE 
    69 Seasonal = ON 
     65Seasonal=ON 
    7066 
    71 [Post_1M_stomate_ipcc_history] 
    72 Patches = () 
    73 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    74 TimeSeriesVars2D = (cVeg, cLitter, cSoil, cProduct, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep, fWoodharvest) 
     67[Post_1Y_stomate_ipcc_history] 
     68Patches= () 
     69GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     70TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, cMassVariation, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp_c, nbp_n, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep_c, nep_n, fWoodharvest) 
    7571ChunckJob2D = NONE 
    76 TimeSeriesVars3D = () 
     72TimeSeriesVars3D=() 
    7773ChunckJob3D = NONE 
    78 Seasonal = ON 
     74Seasonal=ON 
     75 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/dynamico.card

    r6838 r6870  
    1616# If guided_type=nudging, add nudging files(u.nc, v.nc, hur.nc,...) in BoundaryFiles section below 
    1717guided_type=none 
     18 
    1819 
    1920[InitialStateFiles] 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/orchidee.card

    r6855 r6870  
    1919# ROUTING=standard   => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=standard 
    2020# ROUTING=simple     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=simple 
     21# ROUTING=native     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=native (note: routing_simple.nc is used also for this case) 
    2122# ROUTING=off        => in orchidee.def RIVER_ROUTING=n  
    2223ROUTING=simple 
     
    2728# output_level_filename=12    : highest level which will output all variables 
    2829# output_level_filename=NONE  : deactivate the file 
    29 output_level_sechiba_history = 11 
     30output_level_sechiba_history = 2 
    3031output_level_sechiba_out_2 = NONE 
    3132output_level_sechiba_history_4dim = NONE 
    3233 
    33 # Specify output frequency for each file [1y, 1mo, 1d, 3h, 1h, 1ts] 
     34# Specify output frequency for each file [1y, 1mo, 1d, 10800s, 1ts] 
    3435# Settings using WriteFrequency in config.card is not longer used 
    3536output_freq_sechiba_history = 1mo 
    3637output_freq_sechiba_out_2 = 1d 
    37 output_freq_sechiba_history_4dim = 1d 
    38  
     38output_freq_sechiba_history_4dim = 1mo 
    3939 
    4040[InitialStateFiles] 
    41 List=   (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soils_param.nc ), \ 
    42         (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc ), \ 
    43         (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
    44         (${R_IN}/SRF/reftemp4.nc, reftemp.nc ), \ 
    45         (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc) 
     41List=       (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
     42            (${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc, soils_param.nc), \ 
     43            (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
     44            (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc), \ 
     45            (${R_IN}/SRF/reftemp4.nc, reftemp.nc), \ 
     46            (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_1700.nc, PFTmap.nc) 
    4647 
    4748[BoundaryFiles] 
    48 List= () 
    49 ListNonDel= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2/PFTmap_1850.nc, PFTmap.nc),\ 
    50             (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    51  
     49List=   () 
     50ListNonDel= (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    5251 
    5352[SmoothFiles] 
     
    5554 
    5655[ParametersFiles] 
    57 List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
     56List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
    5857        (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4, orchidee_pft.def) ,\ 
    59         (${SUBMIT_DIR}/PARAM/ORCHIDEE/ping_orchidee.xml, . )               ,\ 
    60         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .) ,\ 
     58        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
    6159        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
    62         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
    63         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
    64         (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
     60        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
     61        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
     62        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
    6563 
    6664[RestartFiles] 
    67 List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc),\ 
    68         (routing_restart.nc, routing_restart.nc, routing_start.nc) 
     65List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
     66        (routing_restart.nc, routing_restart.nc, routing_start.nc) 
    6967 
    7068[OutputText] 
    71 List=   (out_orchidee*, orchidee.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_routing_orchidee.xml, context_input_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
     69List=   (out_orchidee*, orchidee.def, orchidee_pft.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, context_routing_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
    7270 
    7371[OutputFiles] 
    74 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
    75         (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
    76         (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
     72List=   (sechiba_history.nc,      ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
     73        (sechiba_history_4dim.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
     74        (sechiba_out_2.nc,        ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
    7775        (ORCHIDEE_interp_diag.nc, ${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc, NONE), \ 
    78         (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc,  NONE) 
     76        (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE), \ 
     77        (diag_routing.nc,         ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc, NONE),\ 
     78        (diag_routing_r.nc,       ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc, NONE) 
     79 
    7980 
    8081[Post_1M_sechiba_history] 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-ico/piControl_TEST.orch4/COMP/stomate.card

    r6479 r6870  
    33 
    44[UserChoices] 
    5  
    65# NINPUT_UPDATE=1Y: change in nitrogen input maps every year.  
    76# Nitrogen input maps should be set in BoundaryFiles/List for 1Y or in InitialStateFile for 0Y. 
     
    1211# If STOMATE_IMPOSE_CN=n the other N-input files are needed, see commented files below 
    1312STOMATE_IMPOSE_CN=n 
    14  
    1513 
    1614# Specify output level for output files 
     
    2725output_freq_stomate_ipcc_history = 1mo 
    2826 
    29  
    3027[InitialStateFiles] 
    31 # cnleaf_map.nc is needed if STOMATE_IMPOSE_CN=y 
    32 #List=    (${R_IN}/SRF/NITROGEN/CN_LEAF/cn_leaf_1850_v0.nc, cnleaf_map.nc) 
    33  
    34 # Following files are needed if STOMATE_IMPOSE_CN=n 
    35 List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_pasture_1900.nc, nfert_pasture.nc) ,\ 
    36      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/synthetic/historical/Nfer_cropland_1900.nc, nfert_cropland.nc) ,\ 
    37      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_pasture_1900.nc, nmanure_pasture.nc) ,\ 
    38      (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP/manure/historical/Nmanure_cropland_1900.nc, nmanure_cropland.nc) ,\ 
    39      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_nhx_1900.nc, ndep_nhx.nc), \ 
    40      (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CCMI_ndep/historical/CCMI_ndep_noy_1900.nc, ndep_noy.nc), \ 
    41      (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    42  
     28List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_nh4_1850.nc, Nfert_ammo_cropland.nc) ,\ 
     29        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_no3_1850.nc, Nfert_nitr_cropland.nc) ,\ 
     30        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_nh4_1850.nc,  Nfert_ammo_pasture.nc) ,\ 
     31        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_no3_1850.nc,  Nfert_nitr_pasture.nc) ,\ 
     32        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/nhx__1850.nc, Nammonium.nc), \ 
     33        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/noy__1850.nc, Nnitrate.nc), \ 
     34        (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    4335 
    4436[BoundaryFiles] 
    45 List=   () 
     37List= () 
    4638ListNonDel= () 
    4739 
     
    6052[OutputFiles] 
    6153List=   (stomate_history.nc,      ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc,      Post_1M_stomate_history),    \ 
    62         (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history) 
     54        (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history), \ 
     55        (stomate_history_4dim.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history_4dim.nc, NONE), \ 
     56        (stomate_fixed_dia.nc, ${R_OUT_SBG_O_Y}/${PREFIX}_1Y_stomate_fixed_dia.nc, NONE) 
    6357 
    64 [Post_1M_stomate_history] 
    65 Patches = () 
    66 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    67 TimeSeriesVars2D = (CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE,WOOD_HARVEST) 
     58[Post_1Y_stomate_history] 
     59Patches= () 
     60GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     61TimeSeriesVars2D= (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,FLUX_PROD_S_LCC_c,FLUX_PROD_M_LCC_c,FLUX_PROD_L_LCC_c,FLUX_PROD_S_HARVEST_c,FLUX_PROD_M_HARVEST_c,FLUX_PROD_L_HARVEST_c) 
    6862ChunckJob2D = NONE 
    69 TimeSeriesVars3D = (VEGET_COV_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,WOOD_HARVEST_PFT) 
     63TimeSeriesVars3D= (LAI_MEAN,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M_n,TOTAL_M_c,TOTAL_BM_LITTER_c,TOTAL_BM_LITTER_n,ADAPTATION,REGENERATION,SOIL_ACTIVE_c,SOIL_ACTIVE_n,SOIL_SLOW_c,SOIL_SLOW_n,SOIL_PASSIVE_c,SOIL_PASSIVE_n,SOIL_SURF_c,SOIL_SURF_n,LITTER_STR_AB_c,LITTER_STR_AB_n,LITTER_STR_BE_c,LITTER_STR_BE_n,LITTER_MET_AB_c,LITTER_MET_AB_n,LITTER_MET_BE_c,LITTER_MET_BE_n,LITTER_WOD_AB_c,LITTER_WOD_AB_n,LITTER_WOD_BE_c,LITTER_WOD_BE_n,TOTAL_TURN_c,TOTAL_TURN_n,LEAF_M_n,LEAF_M_c,N_UPTAKE_NO3,N_UPTAKE_NH4,NH3_EMISSION,N2_EMISSION,N2O_EMISSION,NOX_EMISSION,NBP_pool_c,NBP_flux_c,MBC_NBP1_c,MBC_NBP1_n,MBC_NBP2_c,MBC_NBP2_n) 
    7064ChunckJob3D = NONE 
    71 Seasonal = ON 
     65Seasonal=ON 
    7266 
    73 [Post_1M_stomate_ipcc_history] 
    74 Patches = () 
    75 GatherWithInternal = (lon, lat, Areas, time_counter, time_centered, time_centered_bounds) 
    76 TimeSeriesVars2D = (cProduct, lai, gpp, ra, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, cMassVariation, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep, fWoodharvest, cVegCrop, cLitterCrop, cSoilCrop, nppCrop, raCrop) 
     67[Post_1Y_stomate_ipcc_history] 
     68Patches= () 
     69GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     70TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, cMassVariation, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp_c, nbp_n, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep_c, nep_n, fWoodharvest) 
    7771ChunckJob2D = NONE 
    78 TimeSeriesVars3D = () 
     72TimeSeriesVars3D=() 
    7973ChunckJob3D = NONE 
    80 Seasonal = ON 
     74Seasonal=ON 
     75 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-reg/piControl_TEST.orch4/COMP/orchidee.card

    r6855 r6870  
    33 
    44[UserChoices] 
     5# Select the PFT and age class set-up. NOTE: the number of PFTs should match the  
     6# number in the land cover and maps. The number of age classes does not affect the 
     7# maps that can be used. 
     8DefSuffix = 15pft.1ac 
    59 
    610# VEGET_UPDATE_at_start=y : orchidee.driver will set VEGET_UPDATE=1Y at the first cumul period when starting a new simulation.  
     
    1115# VEGET_UPDATE=1Y : update the vegetation and woodharvest file 1st of January each year 
    1216VEGET_UPDATE=0Y 
     17 
     18# Choice for routing scheme. Set ROUTING below to have following parameters set in orchidee.def :  
     19# ROUTING=standard   => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=standard 
     20# ROUTING=simple     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=simple 
     21# ROUTING=native     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=native (note: routing_simple.nc is used also for this case) 
     22# ROUTING=off        => in orchidee.def RIVER_ROUTING=n  
     23ROUTING=simple 
    1324 
    1425# Specify output level for output files 
     
    2536output_freq_sechiba_history = 1mo 
    2637output_freq_sechiba_out_2 = 1d 
    27 output_freq_sechiba_history_4dim = 1d 
    28  
     38output_freq_sechiba_history_4dim = 1mo 
    2939 
    3040[InitialStateFiles] 
    31 List=   (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soils_param.nc ), \ 
    32         (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc ), \ 
    33         (${R_IN}/SRF/reftemp.nc, . ), \ 
    34         (${R_IN}/SRF/routing.nc, . ), \ 
    35         (${R_IN}/SRF/albedo/alb_bg_modisopt_2D_ESA_v2.nc, alb_bg.nc ), \ 
    36         (${R_IN}/SRF/cartepente2d_15min.nc, .) 
     41List=       (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
     42            (${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc, soils_param.nc), \ 
     43            (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
     44            (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc), \ 
     45            (${R_IN}/SRF/reftemp4.nc, reftemp.nc), \ 
     46            (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_1700.nc, PFTmap.nc) 
    3747 
    3848[BoundaryFiles] 
    39 List= () 
    40 ListNonDel= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v1/PFTmap_1850.nc, PFTmap.nc),\ 
    41             (${R_IN}/SRF/WOODHARVEST/LUH2v2/historical/woodharvest_1850.nc,           woodharvest.nc) 
    42  
     49List=   () 
     50ListNonDel= (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    4351 
    4452[SmoothFiles] 
     
    4654 
    4755[ParametersFiles] 
    48 List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v22, orchidee.def)   ,\ 
    49     (${SUBMIT_DIR}/PARAM/ORCHIDEE/ping_orchidee.xml, . )                      ,\ 
    50         (${SUBMIT_DIR}/PARAM/ORCHIDEE/dr2xml_IPSL_orchidee.xml, dr2xml_orchidee.xml)                    ,\ 
    51         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/file_def_orchidee.xml, .) ,\ 
    52         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/context_input_orchidee.xml, .) ,\ 
    53         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/context_orchidee.xml, .)   ,\ 
    54         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/field_def_orchidee.xml, .) 
     56List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
     57        (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4, orchidee_pft.def) ,\ 
     58        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
     59        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
     60        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)  ,\ 
     61        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
     62        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
    5563 
    5664[RestartFiles] 
    57 List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) 
     65List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
     66        (routing_restart.nc, routing_restart.nc, routing_start.nc) 
    5867 
    5968[OutputText] 
    60 List=   (out_orchidee*, orchidee.def, used_orchidee.def, iodef.xml, context_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, context_input_orchidee.xml, river_desc.nc) 
     69List=   (out_orchidee*, orchidee.def, orchidee_pft.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, context_routing_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
    6170 
    6271[OutputFiles] 
    63 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
    64         (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
    65         (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
     72List=   (sechiba_history.nc,      ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
     73        (sechiba_history_4dim.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
     74        (sechiba_out_2.nc,        ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
    6675        (ORCHIDEE_interp_diag.nc, ${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc, NONE), \ 
    67         (forcing_by_ORCHIDEE.nc, ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE) 
     76        (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE), \ 
     77        (diag_routing.nc,         ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc, NONE),\ 
     78        (diag_routing_r.nc,       ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc, NONE) 
    6879 
    6980 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-reg/piControl_TEST.orch4/COMP/stomate.card

    r6661 r6870  
    33 
    44[UserChoices] 
     5# NINPUT_UPDATE=1Y: change in nitrogen input maps every year.  
     6# Nitrogen input maps should be set in BoundaryFiles/List for 1Y or in InitialStateFile for 0Y. 
     7NINPUT_UPDATE=0Y 
     8 
     9# STOMATE_IMPOSE_CN: impose nitrogen 
     10# If STOMATE_IMPOSE_CN=y the file leaf_cn.nc must be available except if STOMATE_READ_CN=n 
     11# If STOMATE_IMPOSE_CN=n the other N-input files are needed, see commented files below 
     12STOMATE_IMPOSE_CN=n 
    513 
    614# Specify output level for output files 
     
    1725output_freq_stomate_ipcc_history = 1mo 
    1826 
    19  
    2027[InitialStateFiles] 
    21 List=   () 
     28List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_nh4_1850.nc, Nfert_ammo_cropland.nc) ,\ 
     29        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_no3_1850.nc, Nfert_nitr_cropland.nc) ,\ 
     30        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_nh4_1850.nc,  Nfert_ammo_pasture.nc) ,\ 
     31        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_no3_1850.nc,  Nfert_nitr_pasture.nc) ,\ 
     32        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/nhx__1850.nc, Nammonium.nc), \ 
     33        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/noy__1850.nc, Nnitrate.nc), \ 
     34        (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    2235 
    2336[BoundaryFiles] 
    24 List=   () 
     37List= () 
    2538ListNonDel= () 
    2639 
     
    3952[OutputFiles] 
    4053List=   (stomate_history.nc,      ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc,      Post_1M_stomate_history),    \ 
    41         (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history) 
     54        (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history), \ 
     55        (stomate_history_4dim.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history_4dim.nc, NONE), \ 
     56        (stomate_fixed_dia.nc, ${R_OUT_SBG_O_Y}/${PREFIX}_1Y_stomate_fixed_dia.nc, NONE) 
    4257 
    43 [Post_1M_stomate_history] 
    44 Patches = () 
    45 GatherWithInternal = (lon, lat, Areas, CONTFRAC, time_counter, time_centered, time_centered_bounds) 
    46 TimeSeriesVars2D = (CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE,WOOD_HARVEST) 
     58[Post_1Y_stomate_history] 
     59Patches= () 
     60GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     61TimeSeriesVars2D= (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,FLUX_PROD_S_LCC_c,FLUX_PROD_M_LCC_c,FLUX_PROD_L_LCC_c,FLUX_PROD_S_HARVEST_c,FLUX_PROD_M_HARVEST_c,FLUX_PROD_L_HARVEST_c) 
    4762ChunckJob2D = NONE 
    48 TimeSeriesVars3D = (VEGET_COV_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,WOOD_HARVEST_PFT) 
     63TimeSeriesVars3D= (LAI_MEAN,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M_n,TOTAL_M_c,TOTAL_BM_LITTER_c,TOTAL_BM_LITTER_n,ADAPTATION,REGENERATION,SOIL_ACTIVE_c,SOIL_ACTIVE_n,SOIL_SLOW_c,SOIL_SLOW_n,SOIL_PASSIVE_c,SOIL_PASSIVE_n,SOIL_SURF_c,SOIL_SURF_n,LITTER_STR_AB_c,LITTER_STR_AB_n,LITTER_STR_BE_c,LITTER_STR_BE_n,LITTER_MET_AB_c,LITTER_MET_AB_n,LITTER_MET_BE_c,LITTER_MET_BE_n,LITTER_WOD_AB_c,LITTER_WOD_AB_n,LITTER_WOD_BE_c,LITTER_WOD_BE_n,TOTAL_TURN_c,TOTAL_TURN_n,LEAF_M_n,LEAF_M_c,N_UPTAKE_NO3,N_UPTAKE_NH4,NH3_EMISSION,N2_EMISSION,N2O_EMISSION,NOX_EMISSION,NBP_pool_c,NBP_flux_c,MBC_NBP1_c,MBC_NBP1_n,MBC_NBP2_c,MBC_NBP2_n) 
    4964ChunckJob3D = NONE 
    50 Seasonal = ON 
     65Seasonal=ON 
    5166 
    52 [Post_1M_stomate_ipcc_history] 
    53 Patches = () 
    54 GatherWithInternal = (lon, lat, Areas, CONTFRAC, time_counter, time_centered, time_centered_bounds) 
    55 TimeSeriesVars2D = (cProduct, lai, gpp, ra, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, cMassVariation, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep, fWoodharvest, cVegCrop, cLitterCrop, cSoilCrop, nppCrop, raCrop) 
     67[Post_1Y_stomate_ipcc_history] 
     68Patches= () 
     69GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     70TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, cMassVariation, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp_c, nbp_n, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep_c, nep_n, fWoodharvest) 
    5671ChunckJob2D = NONE 
    57 TimeSeriesVars3D = () 
     72TimeSeriesVars3D=() 
    5873ChunckJob3D = NONE 
    59 Seasonal = ON 
     74Seasonal=ON 
     75 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/IPSLCM-reg/piControl_TEST.orch4/config.card

    r6719 r6870  
    1414#----- DEVT TEST PROD 
    1515SpaceName=DEVT 
    16 LongName="IPSLCM7.1-LR" 
     16LongName="IPSLCM7.1-LR.orch4" 
    1717ModelName=IPSL-CM7A-LR 
    1818TagName=IPSLCM7 
    1919#D- Choice of experiment in EXPERIMENTS directory 
    20 ExpType=IPSLCM-reg/piControl_TEST 
     20ExpType=IPSLCM-reg/piControl_TEST.orch4 
    2121#============================ 
    2222#-- leap, noleap, 360d 
     
    5454#D- If you want to restart all components from the same simulation, 
    5555#D-      put OveRule flag to 'y' and set the next 3 parameters 
    56 OverRule=y 
     56OverRule=n 
    5757#D- Last day of the experience used as restart for all components 
    5858RestartDate=2349-12-31 
     
    172172#D- For each component, Name of component, Tag of component 
    173173ATM= (lmdz, LMDZ6-r4144) 
    174 SRF= (orchidee, branch-ORCHIDEE_2_2-7613) 
    175 SBG= (stomate, branch-ORCHIDEE_2_2-7613) 
     174SRF= (orchidee, trunk-ORCHIDEE-8571) 
     175SBG= (stomate, trunk-ORCHIDEE-8571) 
    176176OCE= (opa9, tag_NEMO_v4.2.0-r) 
    177177ICE= (si3,  tag_NEMO_v4.2.0-r) 
     
    185185#D- For each component, Real name of executable, Name of executable for oasis 
    186186## For JZ ATM= (gcm_${ResolAtm}_${OptMode}.e, lmdz.x, 71MPI, 10OMP) 
    187 ATM= (gcm_${ResolAtm}_orch22_${OptMode}.e, lmdz.x, 71MPI, 8OMP) 
     187ATM= (gcm_${ResolAtm}_orch4_${OptMode}.e, lmdz.x, 71MPI, 8OMP) 
    188188SRF= ("" ,"" ) 
    189189SBG= ("" ,"" ) 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/LMDZOR/clim_pdControl.orch4/COMP/orchidee.card

    r6822 r6870  
    33 
    44[UserChoices] 
     5# Select the PFT and age class set-up. NOTE: the number of PFTs should match the  
     6# number in the land cover and maps. The number of age classes does not affect the 
     7# maps that can be used. 
     8DefSuffix = 15pft.1ac 
     9 
    510# VEGET_UPDATE_at_start=y : orchidee.driver will set VEGET_UPDATE=1Y at the first cumul period when starting a new simulation.  
    611#                           After the first period, VEGET_UPDATE will be set according to the choice done below.   
     
    1419# ROUTING=standard   => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=standard 
    1520# ROUTING=simple     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=simple 
     21# ROUTING=native     => in orchidee.def RIVER_ROUTING=y and ROUTING_METHOD=native (note: routing_simple.nc is used also for this case) 
    1622# ROUTING=off        => in orchidee.def RIVER_ROUTING=n  
    17 ROUTING=standard 
     23ROUTING=simple 
    1824 
    1925# Specify output level for output files 
     
    2228# output_level_filename=12    : highest level which will output all variables 
    2329# output_level_filename=NONE  : deactivate the file 
    24 output_level_sechiba_history = 11 
     30output_level_sechiba_history = 2 
    2531output_level_sechiba_out_2 = NONE 
    26 output_level_sechiba_history_4dim = 11 
     32output_level_sechiba_history_4dim = NONE 
    2733 
    2834# Specify output frequency for each file [1y, 1mo, 1d, 10800s, 1ts] 
    2935# Settings using WriteFrequency in config.card is not longer used 
    3036output_freq_sechiba_history = 1mo 
    31 output_freq_sechiba_out_2 = 10800s 
     37output_freq_sechiba_out_2 = 1d 
    3238output_freq_sechiba_history_4dim = 1mo 
    3339 
    34  
    3540[InitialStateFiles] 
    36 List=   (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soils_param.nc), \ 
    37         (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
    38         (${R_IN}/SRF/reftemp.nc, . ), \ 
    39         (${R_IN}/SRF/ROUTING/routing.nc, . ), \ 
    40         (${R_IN}/SRF/albedo/alb_bg_modisopt_2D_ESA_v2.nc, alb_bg.nc ), \ 
    41         (${R_IN}/SRF/cartepente2d_15min.nc, .) 
     41List=       (${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc, .), \ 
     42            (${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc, soils_param.nc), \ 
     43            (${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc, soilcolor.nc), \ 
     44            (${R_IN}/SRF/cartepente2d_15min4.nc, cartepente2d_15min.nc), \ 
     45            (${R_IN}/SRF/reftemp4.nc, reftemp.nc), \ 
     46            (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_2000.nc, PFTmap.nc) 
    4247 
    4348[BoundaryFiles] 
    44 List= () 
    45 ListNonDel= (${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v1/PFTmap_2000.nc, PFTmap.nc),\ 
    46             (${R_IN}/SRF/WOODHARVEST/LUH2v2/historical/woodharvest_2000.nc,           woodharvest.nc),\ 
     49List=   () 
     50ListNonDel= (${R_IN}/SRF/ROUTING/routing_simple.nc, .) 
    4751 
    4852[SmoothFiles] 
     
    5054 
    5155[ParametersFiles] 
    52 List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v22, orchidee.def)   ,\ 
    53         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/file_def_orchidee.xml, .)  ,\ 
    54         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/context_input_orchidee.xml, .) ,\ 
    55         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/context_orchidee.xml, .)   ,\ 
    56         (${MODIPSL}/modeles/ORCHIDEE_2_2/src_xml/field_def_orchidee.xml, .) 
     56List=   (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4, orchidee.def)   ,\ 
     57        (${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4, orchidee_pft.def) ,\ 
     58        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml, .)  ,\ 
     59        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml, .) ,\ 
     60        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml, .)   ,\ 
     61        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_orchidee.xml, .)   ,\ 
     62        (${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml, .) 
    5763 
    5864[RestartFiles] 
    59 List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) 
     65List=   (sechiba_rest_out.nc, sechiba_rest.nc, sechiba_rest_in.nc) ,\ 
     66        (routing_restart.nc, routing_restart.nc, routing_start.nc) 
    6067 
    6168[OutputText] 
    62 List=   (out_orchidee*, orchidee.def, used_orchidee.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
     69List=   (out_orchidee*, orchidee.def, orchidee_pft.def, used_orchidee.def, used_orchidee_pft.def, iodef.xml, context_orchidee.xml, context_input_orchidee.xml, context_routing_orchidee.xml, field_def_orchidee.xml, file_def_orchidee.xml, river_desc.nc) 
    6370 
    6471[OutputFiles] 
    65 List=   (sechiba_history.nc,   ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
    66         (sechiba_history_4dim.nc,${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
    67         (sechiba_out_2.nc,     ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
     72List=   (sechiba_history.nc,      ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc, Post_1M_sechiba_history), \ 
     73        (sechiba_history_4dim.nc, ${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc, NONE), \ 
     74        (sechiba_out_2.nc,        ${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc,   NONE), \ 
    6875        (ORCHIDEE_interp_diag.nc, ${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc, NONE), \ 
    69         (forcing_by_ORCHIDEE.nc, ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE) 
     76        (forcing_by_ORCHIDEE.nc,  ${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc, NONE), \ 
     77        (diag_routing.nc,         ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc, NONE),\ 
     78        (diag_routing_r.nc,       ${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc, NONE) 
    7079 
    7180 
     
    7382Patches = () 
    7483GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) 
    75 TimeSeriesVars2D = (nobiofrac, alb_nir, alb_vis, evap, fluxlat, fluxsens, netrad, qair, rain, runoff, snow, snownobio, snowf, frac_snow, subli, tair, temp_sol, tsol_max, tsol_min, drainage,mrsos, mrso, mrros, mrro, prveg, evspsblveg, evspsblsoi, tran, treeFrac, grassFrac, cropFrac, baresoilFrac, residualFrac, TWBR, riverflow, coastalflow, DelSoilMoist_daily, DelIntercept_daily, DelSWE_daily, delstock_routing_daily, snowmelt, LAImean, transpir, evapnu) 
     84TimeSeriesVars2D = (nobiofrac, alb_nir, alb_vis, evap, fluxlat, fluxsens, rain, runoff, snow, snownobio, snowf, frac_snow, subli, tair, temp_sol, drainage, mrsos, mrso, TWBR, riverflow, coastalflow, DelSoilMoist_daily, DelIntercept_daily, DelSWE_daily, delstock_routing_daily, LAImean, transpir, evapnu, lwdown, swdown, gppCrop, rhCrop) 
    7685ChunckJob2D = NONE 
    77 TimeSeriesVars3D = (lai, maxvegetfrac, vegetfrac, ptn, nee) 
     86TimeSeriesVars3D = (lai, maxvegetfrac, vegetfrac, nee, gpp, growth_resp, hetero_resp, humrel, inter, maint_resp, npp, precisol) 
    7887ChunckJob3D = NONE 
    7988Seasonal = ON 
     
    8291Patches = () 
    8392GatherWithInternal = (lon, lat, time_counter, Areas, Contfrac, time_centered, time_centered_bounds) 
    84 TimeSeriesVars2D = (mrsos, mrro) 
    85 ChunckJob2D = 50Y 
    86 TimeSeriesVars3D = (ptn) 
    87 ChunckJob3D = 10Y 
     93TimeSeriesVars2D = () 
     94ChunckJob2D = NONE 
     95TimeSeriesVars3D = (snowdz, snowtemp, snowrho) 
     96ChunckJob3D = NONE 
    8897Seasonal = OFF 
    8998 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/LMDZOR/clim_pdControl.orch4/COMP/stomate.card

    r5878 r6870  
    33 
    44[UserChoices] 
     5# NINPUT_UPDATE=1Y: change in nitrogen input maps every year.  
     6# Nitrogen input maps should be set in BoundaryFiles/List for 1Y or in InitialStateFile for 0Y. 
     7NINPUT_UPDATE=0Y 
     8 
     9# STOMATE_IMPOSE_CN: impose nitrogen 
     10# If STOMATE_IMPOSE_CN=y the file leaf_cn.nc must be available except if STOMATE_READ_CN=n 
     11# If STOMATE_IMPOSE_CN=n the other N-input files are needed, see commented files below 
     12STOMATE_IMPOSE_CN=n 
    513 
    614# Specify output level for output files 
    715# Only the files stomate_history.nc and stomate_ipcc_history.nc can be set here. 
    816# output_level_filname=0     : lowest level writing only variables needed for the monitoring 
    9 # output_level_filname=10    : highest level which will output all variables 
     17# output_level_filname=1     : highest level which will output all variables 
    1018# output_level_filname=NONE  : deactivate the file 
    11 output_level_stomate_history = 10 
    12 output_level_stomate_ipcc_history = 1 
     19output_level_stomate_history = 0  
     20output_level_stomate_ipcc_history = 0 
    1321 
    1422# Specify output frequency for each file [1y, 1mo, 1d] 
     
    1725output_freq_stomate_ipcc_history = 1mo 
    1826 
    19  
    2027[InitialStateFiles] 
    21 List=   () 
     28List=   (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_nh4_2000.nc, Nfert_ammo_cropland.nc) ,\ 
     29        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_crop_no3_2000.nc, Nfert_nitr_cropland.nc) ,\ 
     30        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_nh4_2000.nc,  Nfert_ammo_pasture.nc) ,\ 
     31        (${R_IN}/SRF/NITROGEN/N_FERTILISATION/NMIP2/synthetic/historical/nfer_pas_no3_2000.nc,  Nfert_nitr_pasture.nc) ,\ 
     32        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/nhx__2000.nc, Nammonium.nc), \ 
     33        (${R_IN}/SRF/NITROGEN/N_DEPOSITION/CMIP6.2/historical/noy__2000.nc, Nnitrate.nc), \ 
     34        (${R_IN}/SRF/NITROGEN/BNF/bnf_1850.nc, bnf.nc) 
    2235 
    2336[BoundaryFiles] 
    24 List=   () 
     37List= () 
    2538ListNonDel= () 
    2639 
     
    3952[OutputFiles] 
    4053List=   (stomate_history.nc,      ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history.nc,      Post_1M_stomate_history),    \ 
    41         (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history) 
     54        (stomate_ipcc_history.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_ipcc_history.nc, Post_1M_stomate_ipcc_history), \ 
     55        (stomate_history_4dim.nc, ${R_OUT_SBG_O_M}/${PREFIX}_1M_stomate_history_4dim.nc, NONE), \ 
     56        (stomate_fixed_dia.nc, ${R_OUT_SBG_O_Y}/${PREFIX}_1Y_stomate_fixed_dia.nc, NONE) 
    4257 
    43 [Post_1M_stomate_history] 
    44 Patches = () 
    45 GatherWithInternal = (lon, lat, Areas, CONTFRAC, time_counter, time_centered, time_centered_bounds) 
    46 TimeSeriesVars2D = (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,CONVFLUX,CFLUX_PROD10,CFLUX_PROD100,HARVEST_ABOVE) 
     58[Post_1Y_stomate_history] 
     59Patches= () 
     60GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     61TimeSeriesVars2D= (T2M_MONTH,RESOLUTION_X,RESOLUTION_Y,FLUX_PROD_S_LCC_c,FLUX_PROD_M_LCC_c,FLUX_PROD_L_LCC_c,FLUX_PROD_S_HARVEST_c,FLUX_PROD_M_HARVEST_c,FLUX_PROD_L_HARVEST_c) 
    4762ChunckJob2D = NONE 
    48 TimeSeriesVars3D = (LAI,VEGET_COV_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,AGE,HEIGHT,TOTAL_M,TOTAL_BM_LITTER,TOTAL_SOIL_CARB,CO2_FIRE,TOTAL_TURN,WOOD_HARVEST_PFT) 
     63TimeSeriesVars3D= (LAI_MEAN,VEGET_MAX,NPP,GPP,HET_RESP,MAINT_RESP,GROWTH_RESP,TOTAL_M_n,TOTAL_M_c,TOTAL_BM_LITTER_c,TOTAL_BM_LITTER_n,ADAPTATION,REGENERATION,SOIL_ACTIVE_c,SOIL_ACTIVE_n,SOIL_SLOW_c,SOIL_SLOW_n,SOIL_PASSIVE_c,SOIL_PASSIVE_n,SOIL_SURF_c,SOIL_SURF_n,LITTER_STR_AB_c,LITTER_STR_AB_n,LITTER_STR_BE_c,LITTER_STR_BE_n,LITTER_MET_AB_c,LITTER_MET_AB_n,LITTER_MET_BE_c,LITTER_MET_BE_n,LITTER_WOD_AB_c,LITTER_WOD_AB_n,LITTER_WOD_BE_c,LITTER_WOD_BE_n,TOTAL_TURN_c,TOTAL_TURN_n,LEAF_M_n,LEAF_M_c,N_UPTAKE_NO3,N_UPTAKE_NH4,NH3_EMISSION,N2_EMISSION,N2O_EMISSION,NOX_EMISSION,NBP_pool_c,NBP_flux_c,MBC_NBP1_c,MBC_NBP1_n,MBC_NBP2_c,MBC_NBP2_n) 
    4964ChunckJob3D = NONE 
    50 Seasonal = ON 
     65Seasonal=ON 
    5166 
    52 [Post_1M_stomate_ipcc_history] 
    53 Patches = () 
    54 GatherWithInternal = (lon, lat, Areas, CONTFRAC, time_counter, time_centered, time_centered_bounds) 
    55 TimeSeriesVars2D = (cVeg, cLitter, cSoil, cProduct, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep, fWoodharvest) 
     67[Post_1Y_stomate_ipcc_history] 
     68Patches= () 
     69GatherWithInternal= (lon, lat, time_counter, Areas, CONTFRAC) 
     70TimeSeriesVars2D=(cVeg, cLitter, cSoil, cProduct, cMassVariation, lai, gpp, ra, npp, rh, fFire, fHarvest, fLuc, nbp_c, nbp_n, fVegLitter, fLitterSoil, cLeaf, cWood, cRoot, cMisc, cLitterAbove, cLitterBelow, cSoilFast, cSoilMedium, cSoilSlow, landCoverFrac, treeFracPrimDec, treeFracPrimEver, c3PftFrac, c4PftFrac, rGrowth, rMaint, nppLeaf, nppWood, nppRoot, nep_c, nep_n, fWoodharvest) 
    5671ChunckJob2D = NONE 
    57 TimeSeriesVars3D = () 
     72TimeSeriesVars3D=() 
    5873ChunckJob3D = NONE 
    59 Seasonal = ON 
     74Seasonal=ON 
     75 
  • CONFIG/UNIFORM/v7/IPSLCM7/EXPERIMENTS/LMDZOR/clim_pdControl.orch4/config.card

    r6719 r6870  
    1515TagName=LMDZOR 
    1616#D- Choice of experiment in EXPERIEMENTS directory 
    17 ExpType=LMDZOR/clim_pdControl 
     17ExpType=LMDZOR/clim_pdControl.orch4 
    1818#============================ 
    1919#-- leap, noleap, 360d 
     
    5757#D- Here is set 71MPI*8OMP which is suitable for resolution 144x142x79 
    5858#D- Change to 31MPI*4OMP for resolution 96x95x39 
    59 ATM= (gcm_${ResolAtm}_orch22_${OptMode}.e, lmdz.x, 71MPI, 8OMP) 
     59ATM= (gcm_${ResolAtm}_orch4_${OptMode}.e, lmdz.x, 71MPI, 8OMP) 
    6060SRF= ("", "") 
    6161SBG= ("", "") 
  • CONFIG/UNIFORM/v7/IPSLCM7/GENERAL/PARAM/ORCHIDEE/orchidee.def_v4

    r6662 r6870  
    1 # $HeadURL: svn://forge.ipsl.jussieu.fr/orchidee/trunk/ORCHIDEE_OL/OOL_SEC_STO_FG2nd/PARAM/orchidee.def $ 
    2 # $Date: 2023-05-12 13:04:57 +0200 (ven. 12 mai 2023) $ 
    3 # $Revision: 8000 $ 
     1# $HeadURL: svn://forge.ipsl.jussieu.fr/orchidee/trunk/ORCHIDEE_OL/FG_CRUJRA_SPIN/PARAM/orchidee.def $ 
     2# $Date: 2024-03-29 12:18:36 +0100 (ven. 29 mars 2024) $ 
     3# $Revision: 8512 $ 
    44 
    55#************************************************************************** 
     
    4343 
    4444 
    45 # Parameters related to the diagnostic output files 
     45# Parameters related to the diagnostic output files and reading input files 
    4646#************************************************************************** 
    4747# Use XIOS for writing diagnostics file 
    4848# (defualt y) 
    4949XIOS_ORCHIDEE_OK = y 
     50 
     51# Use XIOS for interpolation of input files 
     52# XIOS_INTERPOLATION=n 
     53 
    5054 
    5155# Parameters related to debugging and error checking 
     
    114118# SOILTYPE_CLASSIF :  Type of classification used for the map of soil types 
    115119# (default zobler) 
    116 SOILTYPE_CLASSIF = zobler  
     120SOILTYPE_CLASSIF = usda  
    117121 
    118122# SOILALB_FILE : File to read bare soil albedo 
    119123SOILALB_FILE=soilcolor.nc 
    120124 
    121 # Fraction of saturated volumetric soil moisture above which transpir is max (0.3-0.9, unitless) 
    122 WETNESS_TRANSPIR_MAX= 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8 
     125# FR_CENTER_C ([°C]) :  Center value of the freezing window in degree Celsius (default -1.0) 
     126FR_CENTER_C=-1.0  
    123127 
    124128# Parameters related to vegetation map 
     
    128132VEGET_UPDATE = _AUTO_ 
    129133 
    130 # Read lai map 
    131 # (default n) 
    132 LAI_MAP = n 
    133  
    134134# Prescribed vegetation 
    135135# (default n) 
     
    138138 
    139139# Parameters related to surface and thermal physical properties 
     140#************************************************************************ 
    140141 
    141142# Time constant of the albedo decay of snow (days) 
    142143TCST_SNOWA=10. 
    143144 
    144 #************************************************************************ 
    145145# ROUGH_DYN : Account for a dynamic roughness height (activation of Su et 
    146146# al. parametrization) 
     
    148148ROUGH_DYN = y 
    149149 
     150# USE_RATIO_Z0M_Z0H:  Impose a constant ratio as in ROUGH_DYN (default: y)  
     151USE_RATIO_Z0M_Z0H=y 
     152 
     153# RATIO_Z0M_Z0H:  Ratio between z0m and z0h (Default: 10.0) 
     154RATIO_Z0M_Z0H=10.0 
     155 
    150156# OK_FREEZE :  Activate the complet soil freezing scheme 
    151157# (default y) 
     
    155161# (default y) 
    156162OK_EXPLICITSNOW = y 
     163 
     164# NSNOW : Number of snow levels. Possible values are 3 or 12 
     165NSNOW=12 
    157166 
    158167# Controls several settings related to the energy budget and water stress. 
     
    180189# Analytic spinup 
    181190# (default n) 
    182 SPINUP_ANALYTIC = n 
     191SPINUP_ANALYTIC = n  
    183192SPINUP_PERIOD = 10 
    184193 
     
    207216# File and variable name for nitrogen input files 
    208217#************************************************************************** 
    209 Nammonium_FILE = ndep_nhx.nc 
     218Nammonium_FILE = Nammonium.nc 
    210219Nammonium_VAR = nhx 
    211220 
    212 Nnitrate_FILE = ndep_noy.nc 
     221Nnitrate_FILE = Nnitrate.nc 
    213222Nnitrate_VAR = noy 
    214223 
    215 Nfert_FILE = NONE 
    216 Nfert_VAR = nfer 
    217  
    218 Nmanure_FILE = NONE 
    219 Nmanure_VAR = Nmanure 
    220  
    221 Nfert_cropland_FILE = nfert_cropland.nc 
    222 Nfert_cropland_VAR = nfer 
    223  
    224 Nmanure_cropland_FILE = nmanure_cropland.nc 
    225 Nmanure_cropland_VAR = Nmanure 
    226  
    227 Nfert_pasture_FILE = nfert_pasture.nc 
    228 Nfert_pasture_VAR = Nfer 
    229  
    230 Nmanure_pasture_FILE = nmanure_pasture.nc 
    231 Nmanure_pasture_VAR = Nmanure 
    232  
     224Nfert_ammo_cropland_FILE = Nfert_ammo_cropland.nc 
     225Nfert_ammo_cropland_VAR = nfer_crop_nh4 
     226 
     227Nfert_nitr_cropland_FILE = Nfert_nitr_cropland.nc 
     228Nfert_nitr_cropland_VAR = nfer_crop_no3 
     229 
     230Nfert_ammo_pasture_FILE = Nfert_ammo_pasture.nc 
     231Nfert_ammo_pasture_VAR = nfer_pas_nh4 
     232 
     233Nfert_nitr_pasture_FILE = Nfert_nitr_pasture.nc 
     234Nfert_nitr_pasture_VAR = nfer_pas_no3 
     235  
    233236Nbnf_FILE= bnf.nc 
    234237Nbnf_VAR= BNF_MGN_PERM2_PERYR 
     
    252255# CO2 FOR BVOC - POSSELL :  CO2 inhibition effect for isoprene based on Possell approach? 
    253256CO2_FOR_BVOC_POSSELL=n 
     257 
  • CONFIG/UNIFORM/v7/IPSLCM7/GENERAL/PARAM/ORCHIDEE/orchidee_pft.def_15pft.1ac_v4

    r6656 r6870  
    1 # $HeadURL: svn://forge.ipsl.jussieu.fr/orchidee/trunk/ORCHIDEE_OL/OOL_SEC_STO_FG2nd/PARAM/orchidee_pft.def_15pft.1ac $ 
    2 # $Date: 2023-05-12 13:04:57 +0200 (ven. 12 mai 2023) $ 
    3 # $Revision: 8000 $ 
     1 
    42#*************************************************************************** 
    53#            Set-up age classes 
     
    7169 
    7270 
     71# ALPHA_SELF_THINNING(unitless) 
     72ALPHA_SELF_THINNING__05=2430 
     73ALPHA_SELF_THINNING__07=3292 
     74 
     75 
    7376# COEFF_MAINT_INIT(gC.gN.day-1) 
     77COEFF_MAINT_INIT__05=0.0227 
     78COEFF_MAINT_INIT__06=0.226 
     79COEFF_MAINT_INIT__07=0.0171 
     80COEFF_MAINT_INIT__08=0.09333 
     81COEFF_MAINT_INIT__09=0.2049 
    7482COEFF_MAINT_INIT__14=0.07 
    7583COEFF_MAINT_INIT__15=0.13 
     
    96104 
    97105 
     106# K_BELOWGROUND(m3 kg-1 s-1 MPa-1) 
     107K_BELOWGROUND__02=8.62e-08 
     108K_BELOWGROUND__05=2.82e-08 
     109K_BELOWGROUND__06=3e-07 
     110K_BELOWGROUND__07=8.19e-09 
     111K_BELOWGROUND__09=4.85e-08 
     112 
     113 
    98114# K_LATOSA_MAX(unitless) 
     115K_LATOSA_MAX__05=5632 
     116K_LATOSA_MAX__06=19723 
     117K_LATOSA_MAX__07=15826 
     118K_LATOSA_MAX__08=32756 
     119K_LATOSA_MAX__09=30049 
    99120K_LATOSA_MAX__14=8500 
    100121K_LATOSA_MAX__15=10000 
     
    102123 
    103124# K_LATOSA_MIN(unitless) 
     125K_LATOSA_MIN__05=2018 
     126K_LATOSA_MIN__06=8211 
     127K_LATOSA_MIN__07=6073 
     128K_LATOSA_MIN__08=16710 
     129K_LATOSA_MIN__09=14730 
    104130K_LATOSA_MIN__14=8500 
    105131K_LATOSA_MIN__15=10000 
     
    107133 
    108134# LONGEVITY_SAP(days) 
     135LONGEVITY_SAP__05=3534 
     136LONGEVITY_SAP__06=1563 
     137LONGEVITY_SAP__07=3127 
     138LONGEVITY_SAP__08=1937 
     139LONGEVITY_SAP__09=1570 
    109140LONGEVITY_SAP__14=180 
    110141LONGEVITY_SAP__15=240 
     
    121152 
    122153 
     154# NUE_OPT((mumol[CO2] s-1) (gN[leaf])-1) 
     155NUE_OPT__05=18.88 
     156NUE_OPT__07=19.96 
     157NUE_OPT__08=20.34 
     158NUE_OPT__09=40.79 
     159 
     160 
    123161# PERCENT_THROUGHFALL_PFT(percent) 
    124162PERCENT_THROUGHFALL_PFT__02=35 
     
    144182PHENO_MODEL__14=moi 
    145183PHENO_MODEL__15=moigdd 
     184 
     185 
     186# SLAINIT(m2 gC-1) 
     187SLAINIT__05=0.03604 
     188SLAINIT__06=0.06131 
     189SLAINIT__07=0.0119 
     190SLAINIT__08=0.06822 
     191SLAINIT__09=0.03684 
     192 
     193 
     194# TREE_FF(unitless) 
     195TREE_FF__05=0.793 
     196TREE_FF__06=0.8552 
     197TREE_FF__07=0.7359 
     198TREE_FF__08=0.9442 
     199TREE_FF__09=0.6209 
     200 
     201 
     202# VMAX_UPTAKE_NH4(umol g DryWeight_root-1 h-1) 
     203VMAX_UPTAKE_NH4__05=23.96 
     204VMAX_UPTAKE_NH4__06=10.18 
     205VMAX_UPTAKE_NH4__07=12.19 
     206VMAX_UPTAKE_NH4__08=14.06 
     207VMAX_UPTAKE_NH4__09=16.51 
     208 
     209 
     210# VMAX_UPTAKE_NO3(umol g DryWeight_root-1 h-1) 
     211VMAX_UPTAKE_NO3__05=5.03 
     212VMAX_UPTAKE_NO3__06=23.51 
     213VMAX_UPTAKE_NO3__07=9.85 
     214VMAX_UPTAKE_NO3__09=17.97 
    146215 
    147216 
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