Changes between Version 14 and Version 15 of Documentation/UserGuide/TestCase1

Timestamp:

2016-11-08T11:44:14+01:00 (8 years ago)

Author:

pmaugis

Comment:

--

Documentation/UserGuide/TestCase1

@@ -2 +2 @@
 This page describes how to prepare the run directory and run ORCHIDEE interactively. You can also run using a job and launch on the batch system: [wiki:Documentation/UserGuide/TestCaseBatch].[[BR]]
 
-You need following files :
+You need the following files :
    - forcing_file.nc   (680M)
    - PFTmap.nc         (13M) 
@@ -9 +9 @@
    - run.def
    - executable orchidee_ol
+
+Go to your run directory (for example "MYFIRSTTEST/RUN1", "MYFIRSTTEST" being at the same level as "modipsl" directory)
 
 '''Get the input files :''' 
@@ -21 +23 @@
 ''Note: If you do not compile with XIOS, you do not need to copy these files but you need to adapt run.def to activate output with IOIPSL, see further below.''[[BR]]
 
-The xml files controls the output of the model if you use XIOS. XIOS is the default since rev 3115 in the trunk. Copy the files from the model directory. Here suppose default compilation with XIOS 1.0. 
+The xml files controls the output of the model if you use XIOS. XIOS is the default since rev 3115 in the trunk. Copy the files from the "modeles" directory. Here we suppose default compilation with XIOS 1.0 but you should copy the actual iodef*.xml that exists in your revision.
 
 {{{
-cp modipsl/modeles/ORCHIDEE/src_xml/iodef_xios1.xml iodef.xml
-cp modipsl/modeles/ORCHIDEE/src_xml/context_orchidee.xml .
-cp modipsl/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml .
-cp modipsl/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml .
+cp ../../modipsl/modeles/ORCHIDEE/src_xml/iodef_xios1.xml iodef.xml
+cp ../../modipsl/modeles/ORCHIDEE/src_xml/context_orchidee.xml .
+cp ../../modipsl/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml .
+cp ../../modipsl/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml .
 }}}
 
-Edit file_def_orchidee.xml by changing 
+Edit file_def_orchidee.xml to change every instance of "_AUTO_" (two for each output file)
  * enabled="_AUTO_" into enabled=".TRUE." or enabled=".FALSE."
  * output_freq="_AUTO_" into output_freq="1mo" or output_freq="1d" par example
- * change all you want to adapt the output to what you want
+ * do any other change as you wish to adapt the output to your needs
 
 Edit field_def_orchidee.xml only if you changed the ORCHDEE source code.