Changes between Version 10 and Version 11 of Documentation/UserGuide/TestCase1

Timestamp:

2016-01-13T12:13:11+01:00 (9 years ago)

Author:

jgipsl

Comment:

--

Documentation/UserGuide/TestCase1

@@ -17 +17 @@
 wget http://dods.extra.cea.fr/work/p86ipsl/IGCM/SRF/reftemp.nc
 }}}
+
+'''Get xml files for running with XIOS:'''[[BR]]
+''Note: If you do not compile with XIOS, you do not need to copy these files but you need to adapt run.def, see further below.''[[BR]]
+
+The xml files controls the output of the model if you use XIOS. XIOS is the default since rev 3115 in the trunk. Copy the files from the model directory. Here suppose default compilation with XIOS 1.0. 
+
+{{{
+cp modipsl/modeles/ORCHIDEE/src_xml/iodef_xios1.xml iodef.xml
+cp modipsl/modeles/ORCHIDEE/src_xml/context_orchidee.xml .
+cp modipsl/modeles/ORCHIDEE/src_xml/field_def_orchidee.xml .
+cp modipsl/modeles/ORCHIDEE/src_xml/file_def_orchidee.xml .
+}}}
+
+Edit file_def_orchidee.xml by changing 
+ * enabled="_AUTO_" into enabled=".TRUE." or enabled=".FALSE."
+ * output_freq="_AUTO_" into output_freq="1mo" or output_freq="1d" par example
+ * change all you want to adapt the output to what you want
+
+Edit field_def_orchidee.xml only if you changed the ORCHDEE source code.
 
 '''Save following lines into run.def :'''
@@ -42 +61 @@
 VEGET_YEAR=1
 
-# Variables for diagnostics :
+STOMATE_OK_CO2= y
+STOMATE_OK_STOMATE= y
+}}}
+
+If you want to run with IOIPSL for writing output files, then you need to deactivated XIOS and add control variables for IOIPSL in run.def. For example add following:
+{{{
+# Deactivate XIOS
+XIOS_ORCHIDEE_OK=n
+
+# Variables for output with IOIPSL :
 WRITE_STEP= -1.
 SECHIBA_HISTLEVEL= 11
@@ -48 +76 @@
 SECHIBA_HISTLEVEL2= 1
 WRITE_STEP2= 10800.0
-STOMATE_OK_CO2= y
-STOMATE_OK_STOMATE= y
 STOMATE_HIST_DT= -1.
 STOMATE_HISTLEVEL= 10
@@ -57 +83 @@
 
 '''Check you environment:'''[[BR]]
-To run the model you first need to load the same netcdf library as the one used for the compilation. Check if you already have loaded netcdf and if yes, unload it and load netcdf/4p as follow: 
+To run the model you first need to load the same netcdf library as the one used for the compilation. This depends on the machine you work at. 
+
+For obelix, check if you already have loaded netcdf and if yes, unload it and load netcdf/4p as follow: 
 {{{
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