Changes between Version 6 and Version 7 of Documentation/OrchideeParameters


Ignore:
Timestamp:
2012-05-24T16:29:34+02:00 (12 years ago)
Author:
dsolyga
Comment:

--

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  • Documentation/OrchideeParameters

    v6 v7  
    88Here is given the list of all the parameters classified by flags :  
    99 
    10  || Config Key|| Config Def || Config Units || Config Desc || Config Help || Config If || 
     10  || Config Key|| Config Def || Config Units || Config Desc || Config Help || Config If || 
    1111 ||           ||            ||              ||             ||             ||           || 
    1212 ||  ALLOW_WEATHERGEN  ||  n  ||  [FLAG]  ||  Allow weather generator to create data  ||  This flag allows the forcing-reader to generate synthetic data if the data in the file is too sparse  and the temporal resolution would not be enough to  run the model.   ||  [-] ||  
     
    4444 ||  RELAX_A  ||  1.0  ||  [days?]  ||  Time constant of the relaxation layer  ||  The time constant associated to the atmospheric conditions which are going to be computed  in the relaxed layer. To avoid too much  damping the value should be larger than 1000.   ||  RELAXATION ||  
    4545 ||  ORCHIDEE_WATCHOUT  ||  n  ||  [FLAG]  ||  ORCHIDEE will write out its forcing to a file  ||  This flag allows to write to a file all the variables which are used to force the land-surface. The file  has exactly the same format than a normal off-line forcing  and thus this forcing can be used for forcing ORCHIDEE.   ||  ||  
     46 ||  ALLOW_WEATHERGEN  ||  n  ||  [FLAG]  ||  Allow weather generator to create data  ||  This flag allows the forcing-reader to generate synthetic data if the data in the file is too sparse  and the temporal resolution would not be enough to  run the model.   ||   ||  
    4647 ||  FORCE_CO2_VEG  ||  n  ||  [FLAG]  ||  Flag to force the value of atmospheric CO2 for vegetation.  ||  If this flag is set to true, the ATM_CO2 parameter is used to prescribe the atmospheric CO2.  This Flag is only use in couple mode.   ||  [-] ||  
    4748 ||  FORCE_CO2_VEG  ||  n  ||  [FLAG]  ||  Flag to force the value of atmospheric CO2 for vegetation.  ||  If this flag is set to true, the ATM_CO2 parameter is used to prescribe the atmospheric CO2.  This Flag is only use in couple mode.   ||  [-] ||  
     49 ||  FORCING_FILE  ||  forcing_file.nc  ||  [FILE]   ||  Name of file containing the forcing data  ||  This is the name of the file which should be opened for reading the forcing data of the dim0 model.  The format of the file has to be netCDF and COADS  compliant.   ||  [-] ||  
     50 ||  CANOPY_MULTILAYER  ||  n  ||  [FLAG]  ||  Use canopy radiative transfer model with multi-layers  ||  set to TRUE if canopy radiative transfer model is with multiple layers   ||  CANOPY_EXTINCTION  ||  
     51 ||  EM_FACTOR_ACETAL  ||  0., 0.1, 0.1, 0.3, 0.15, 0.1, 0.3, 0.3, 0.3, 0.1, 0.15, 0.025, 0.025  ||  [ugC/g/h]    ||  Acetaldehyde emissions factor   ||   ||  DIFFUCO_OK_INCA ||  
     52 ||  EM_FACTOR_FORMIC  ||  0., 0.01, 0.01, 0.03, 0.015, 0.01, 0.03, 0.03, 0.03, 0.01, 0.015, 0.0025, 0.0025   ||  [ugC/g/h]    ||  Formic Acid emissions factor  ||   ||  DIFFUCO_OK_INCA ||  
     53 ||  EM_FACTOR_ISOPRENE  ||  0., 24., 24., 8., 16., 45., 8., 8., 8., 16., 24., 5., 5.  ||  [ugC/g/h]   ||  Isoprene emission factor  ||   ||  DIFFUCO_OK_INCA ||  
     54 ||  EM_FACTOR_NO_DRY  ||  0., 8.60, 0.40, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 2.65, 2.65, 2.65, 2.65  ||  [ngN/m^2/s]   ||  NOx emissions factor dry soil emissions and exponential dependancy factor   ||   ||  DIFFUCO_OK_INCA ||  
     55 ||  EM_FACTOR_NO_WET  ||  0., 2.6, 0.06, 0.03, 0.03, 0.03, 0.03, 0.03, 0.03, 0.36, 0.36, 0.36, 0.36  ||  [ngN/m^2/s]  ||  NOx emissions factor wet soil emissions and exponential dependancy factor   ||   ||  DIFFUCO_OK_INCA ||  
     56 ||  EM_FACTOR_OVOC  ||  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5  ||  [ugC/g/h]          ||  OVOC emissions factor  ||   ||  DIFFUCO_OK_INCA ||  
     57 ||  ISO_ACTIVITY  ||  0.5, 1.5, 1.5, 0.5  ||  [-]  ||  Biogenic activity for each age class : isoprene  ||   ||  DIFFUCO_OK_INCA ||  
     58 ||  LEAFAGE_OK_INCA  ||  n  ||  [FLAG]  ||  Activate LEAFAGE?  ||  set to TRUE if biogenic emissions calculation takes leaf age into account  ||  DIFFUCO_OK_INCA ||  
     59 ||  METHANOL_ACTIVITY  ||  1., 1., 0.5, 0.5  ||  [-]  ||  Isoprene emission factor for each age class : methanol  ||   ||  DIFFUCO_OK_INCA ||  
     60 ||  CANOPY_EXTINCTION   ||  n  ||  [FLAG]  ||  Use canopy radiative transfer model?  ||  set to TRUE if canopy radiative transfer model is used for biogenic emissions   ||  DIFFUCO_OK_INCA  ||  
     61 ||  EM_FACTOR_ACETIC  ||  0., 0.002, 0.002, 0.006, 0.003, 0.002, 0.006, 0.006, 0.006, 0.002, 0.003, 0.0005, 0.0005  ||  [ugC/g/h]    ||  Acetic Acid emissions factor  ||   ||  DIFFUCO_OK_INCA  ||  
     62 ||  EM_FACTOR_ACETONE  ||  0., 0.29, 0.29, 0.87, 0.43, 0.29, 0.87, 0.87, 0.87, 0.29, 0.43, 0.07, 0.07   ||  [ugC/g/h]       ||  Acetone emissions factor  ||   ||  DIFFUCO_OK_INCA  ||  
     63 ||  EM_FACTOR_FORMAL  ||  0., 0.07, 0.07, 0.2, 0.1, 0.07, 0.2, 0.2, 0.2, 0.07, 0.1, 0.017, 0.017  ||  [ugC/g/h]    ||  Formaldehyde emissions factor  ||    ||  DIFFUCO_OK_INCA  ||  
     64 ||  EM_FACTOR_MBO  ||  0., 0., 0., 20.0, 0., 0., 0., 0., 0., 0., 0., 0., 0.  ||  [ugC/g/h]    ||  MBO emissions factor   ||   ||  DIFFUCO_OK_INCA  ||  
     65 ||  EM_FACTOR_METHANOL  ||  0., 0.6, 0.6, 1.8, 0.9, 0.6, 1.8, 1.8, 1.8, 0.6, 0.9, 2., 2.  ||  [ugC/g/h]    ||  Methanol emissions factor   ||   ||  DIFFUCO_OK_INCA  ||  
     66 ||  EM_FACTOR_MONOTERPENE  ||  0., 0.8, 0.8, 2.4, 1.2, 0.8, 2.4, 2.4, 2.4, 0.8, 1.2, 0.2, 0.2  ||  [ugC/g/h]   ||  Monoterpene emission factor   ||   ||  DIFFUCO_OK_INCA  ||  
     67 ||  EM_FACTOR_ORVOC  ||  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5  ||  [ugC/g/h]    ||  ORVOC emissions factor   ||   ||  DIFFUCO_OK_INCA  ||  
     68 ||  LARCH  ||  0., 0.015, 0.015, 0.003, 0.005, 0.005, 0.003, 0.005, 0.003, 0.005, 0.005, 0.008, 0.008  ||  [-]    ||  Larcher 1991 SAI/LAI ratio  ||   ||  DIFFUCO_OK_INCA  ||  
     69 ||  NOx_BBG_FERTIL  ||  n  ||  [FLAG]  ||  Calculate NOx emissions with bbg fertilizing effect?  ||  set to TRUE if NOx emissions are calculated with bbg effect  Fertil effect of bbg on NOx soil emissions   ||  DIFFUCO_OK_INCA  ||  
     70 ||  NOx_FERTILIZERS_USE  ||  n  ||  [FLAG]   ||  Calculate NOx emissions with fertilizers use?  ||  set to TRUE if NOx emissions are calculated with fertilizers use Fertilizers use effect on NOx soil emissions   ||  DIFFUCO_OK_INCA  ||  
     71 ||  NOx_RAIN_PULSE  ||  n  ||  [FLAG]  ||  Calculate NOx emissions with pulse?  ||  set to TRUE if NOx rain pulse is taken into account  ||  DIFFUCO_OK_INCA  ||  
    4872 ||  ATM_CO2  ||  350.  ||  [ppm]  ||  Value for atm CO2   ||  Value to prescribe the atm CO2. For pre-industrial simulations, the value is 286.2 .  348. for 1990 year.   ||  FORCE_CO2_VEG (in not forced mode) ||  
    4973 ||  ATM_CO2  ||  350.  ||  [ppm]  ||  Value for atm CO2   ||  Value to prescribe the atm CO2. For pre-industrial simulations, the value is 286.2 .  348. for 1990 year.   ||  FORCE_CO2_VEG (in not forced mode) ||  
     
    128152 ||  CONDVEG_SNOWA  ||  1.E+20  ||  [-]  ||  The snow albedo used by SECHIBA  ||  This option allows the user to impose a snow albedo. Default behaviour is to use the model of snow albedo  developed by Chalita (1993).   ||  OK_SECHIBA ||  
    129153 ||  DEW_VEG_POLY_COEFF  ||  0.887773, 0.205673, 0.110112, 0.014843, 0.000824, 0.000017   ||  [-]     ||  coefficients of the polynome of degree 5 for the dew  ||    ||  OK_SECHIBA ||  
    130  ||  DIFFUCO_LEAFCI  ||  233.  ||   ||  Initial leaf CO2 level if not found in restart  ||  The initial value of leaf_ci if its value is not found in the restart file. This should only be used if the model is  started without a restart file.   ||  OK_SECHIBA ||  
     154 ||  DIFFUCO_LEAFCI  ||  233.  ||  [ppm]  ||  Initial leaf CO2 level if not found in restart  ||  The initial value of leaf_ci if its value is not found in the restart file. This should only be used if the model is  started without a restart file.   ||  OK_SECHIBA ||  
     155 ||  DIFFUCO_OK_INCA  ||  n  ||  [FLAG]  ||  Activate DIFFUCO_INCA?  ||  set to TRUE if biogenic emissions calculation is to be activated  ||  OK_SECHIBA ||  
    131156 ||  HYDROL_CWRR  ||  n  ||  [FLAG]  ||  Allows to switch on the multilayer hydrology of CWRR  ||  This flag allows the user to decide if the vertical hydrology should be treated using the multi-layer  diffusion scheme adapted from CWRR by Patricia de Rosnay.  by default the Choisnel hydrology is used.   ||  OK_SECHIBA ||  
    132157 ||  HYDROL_HUMCSTE  ||  5., .8, .8, 1., .8, .8, 1., 1., .8, 4., 4., 4., 4.  ||  [m]  ||  Root profile  ||  Default values were defined for 2 meters soil depth. For 4 meters soil depth, you may use those ones :  5., .4, .4, 1., .8, .8, 1., 1., .8, 4., 1., 4., 1.   ||  OK_SECHIBA ||  
    133158 ||  HYDROL_SNOW  ||  0.0  ||  [kg/m^2]  ||  Initial snow mass if not found in restart  ||  The initial value of snow mass if its value is not found in the restart file. This should only be used if the model is  started without a restart file.   ||  OK_SECHIBA ||  
    134159 ||  IMPOSE_AZE  ||  n  ||  [FLAG]  ||  Should the surface parameters be prescribed  ||  This flag allows the user to impose the surface parameters (Albedo Roughness and Emissivity). It is espacially interesting for 0D  simulations. On the globe it does not make too much sense as  it imposes the same vegetation everywhere   ||  OK_SECHIBA ||  
     160 ||  IS_BOREAL   ||  n, n, n, n, n, n, y, y, y, n, n, n, n  ||  [BOOLEAN]  ||  Is PFT boreal ?  ||   ||  OK_SECHIBA ||  
     161 ||  IS_BROADLEAF  ||  n, y, y, n, y, y, n, y, n, n, n, n, n  ||  [BOOLEAN]  ||  Is PFT broadleaf ?  ||   ||  OK_SECHIBA ||  
     162 ||  IS_NEEDLELEAF  ||  n, n, n, y, n, n, y, n, y, n, n, n, n   ||  [BOOLEAN]  ||  Is PFT needleleaf ?  ||   ||  OK_SECHIBA ||  
     163 ||  IS_SUMMERGREEN  ||  n, n, n, n, n, y, n, y, y, n, n, n, n   ||  [BOOLEAN]  ||  Is PFT summergreen ?  ||   ||  OK_SECHIBA ||  
     164 ||  IS_TEMPERATE   ||  n, n, n, y, y, y, n, n, n, n, n, n, n  ||  [BOOLEAN]  ||  Is PFT temperate ?  ||   ||  OK_SECHIBA ||  
    135165 ||  IS_TREE  ||  n, y, y, y, y, y, y, y, y, n, n, n, n  ||  [BOOLEAN]  ||  Is the vegetation type a tree ?  ||   ||  OK_SECHIBA ||  
     166 ||  IS_TROPICAL  ||  n, y, y, n, n, n, n, n, n, n, n, n, n  ||  [BOOLEAN]  ||  Is PFT tropical ?  ||   ||  OK_SECHIBA ||  
    136167 ||  KZERO  ||  0.0, 12.E-5, 12.E-5, 12.e-5, 12.e-5, 25.e-5, 12.e-5,25.e-5, 25.e-5, 30.e-5, 30.e-5, 30.e-5, 30.e-5   ||  [kg/m^2/s]  ||  A vegetation dependent constant used in the calculation of the surface resistance.  ||   ||  OK_SECHIBA ||  
    137168 ||  LAIMAX  ||    ||  [m^2/m^2]     ||  Maximum LAI  ||    ||  OK_SECHIBA ||  
     
    207238 ||  VJMAX_FIX  ||  0., 80., 100., 60., 70., 80.,  60., 80., 70., 120., 120., 140., 140.  ||  [micromol/m^2/s]  ||  values used for vjmax when STOMATE is not activated  ||   ||  OK_SECHIBA and NOT(OK_STOMATE) ||  
    208239 ||  STOMATE_OK_STOMATE  ||  n  ||  [FLAG]  ||  Activate STOMATE?  ||  set to TRUE if STOMATE is to be activated  ||  OK_SECHIBA and OK_CO2 ||  
     240 ||  IS_C3  ||  n, n, n, n, n, n, n, n, n, y, n, y, n  ||  [BOOLEAN]  ||  is PFT C3 ?  ||   ||  OK_SECHIBA, OK_STOMATE ||  
    209241 ||  NATURAL  ||  y, y, y, y, y, y, y, y, y, y, y, n, n   ||  [BOOLEAN]  ||  natural?   ||   ||  OK_SECHIBA, OK_STOMATE ||  
    210242 ||  LLAIMIN  ||  0., 8., 0., 4., 4.5, 0., 4., 0., 0., 0., 0., 0., 0.  ||  [m^2/m^2]  ||  laimin for minimum lai(see also type of lai interpolation)  ||  Minimum values of lai used for interpolation of the lai map  ||  OK_SECHIBA or IMPOSE_VEG ||  
     
    223255 ||  PFT_NAME  ||  bare ground, tropical broad-leaved evergreen, tropical broad-leaved raingreen,   ||  [-]  ||  Name of a PFT  ||  the user can name the new PFTs he/she introducing for new species  ||  OK_SECHIBA or OK_STOMATE ||  
    224256 ||  PFT_TO_MTC  ||  1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13  ||  [-]  ||  correspondance array linking a PFT to MTC  ||   ||  OK_SECHIBA or OK_STOMATE ||  
    225  ||  PREF_SOIL_VEG_CLAY  ||  3, 1, 1, 1, 1, 1 ,1 ,1 ,1 ,1 ,1 ,1, 1   ||  [-]          ||  Table which contains the correlation between the soil types and vegetation type  ||  third layer of the soil   ||  OK_SECHIBA or OK_STOMATE ||  
     257 ||  PREF_SOIL_VEG_CLAY  ||  3, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1   ||  [-]          ||  Table which contains the correlation between the soil types and vegetation type  ||  third layer of the soil   ||  OK_SECHIBA or OK_STOMATE ||  
    226258 ||  PREF_SOIL_VEG_LOAN  ||  2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3  ||  [-]  ||  Table which contains the correlation between the soil types and vegetation type  ||  second layer of the soil  ||  OK_SECHIBA or OK_STOMATE ||  
    227259 ||  PREF_SOIL_VEG_SAND  ||  1, 3, 3, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2  ||  [-]  ||  Table which contains the correlation between the soil types and vegetation type  ||  first layer of the soil  ||  OK_SECHIBA or OK_STOMATE ||  
     
    248280 ||  HUM_FRAC  ||  undef, undef, .5, undef, undef, undef, undef, undef,  undef, .5, .5, .5,.5       ||  [%]  ||  critical humidity (relative to min/max) for phenology  ||   ||  OK_STOMATE ||  
    249281 ||  HUM_MIN_TIME  ||  undef, undef, 50., undef, undef, undef, undef, undef, undef, 35., 35., 75., 75.  ||  [days]  ||  minimum time elapsed since moisture minimum  ||   ||  OK_STOMATE ||  
    250  ||  IS_C3  ||  n, n, n, n, n, n, n, n, n, n, y, n, y, n  ||  [BOOLEAN]  ||  is PFT C3 ?  ||   ||  OK_STOMATE ||  
    251282 ||  IS_DECIDUOUS  ||  n, n, y, n, n, y, n, y, y, n, n, n, n  ||  [BOOLEAN]   ||  is PFT deciduous ?  ||   ||  OK_STOMATE ||  
    252283 ||  IS_EVERGREEN  ||  n, y, n, y, y, n, y, n, n, n, n, n, n  ||  [BOOLEAN]  ||  is PFT evergreen ?  ||   ||  OK_STOMATE ||  
     
    278309 ||  SENESCENCE_TEMP_C  ||  undef, undef, undef, undef, undef, 12., undef, 7., 2., -1.375, 5., 5., 10.  ||  [-]  ||  critical temperature for senescence (C), constant c of aT^2+bT+c, tabulated  ||   ||  OK_STOMATE ||  
    279310 ||  SENESCENCE_TYPE  ||  none, none, dry, none, none, cold, none, cold, cold, mixed, mixed, mixed, mixed   ||  [-]  ||  type of senescence, tabulated  ||   ||  OK_STOMATE ||  
    280  ||  SLA  ||  1.5E-2, 1.53E-2,  2.6E-2, 9.26E-3,  2E-2,  2.6E-2,  9.26E-3, 2.6E-2,  1.9E-2, 2.6E-2, 2.6E-2, 2.6E-2, 2.6E-2  ||  [m^2/gC]  ||  specif leaf area   ||   ||  OK_STOMATE ||  
     311 ||  SLA  ||  1.5E-2, 1.53E-2, 2.6E-2, 9.26E-3, 2E-2, 2.6E-2, 9.26E-3, 2.6E-2, 1.9E-2, 2.6E-2, 2.6E-2, 2.6E-2, 2.6E-2  ||  [m^2/gC]  ||  specif leaf area   ||   ||  OK_STOMATE ||  
    281312 ||  STOMATE_CFORCING_NAME  ||  NONE  ||  [FILE]  ||  Name of STOMATE's carbon forcing file  ||  Name that will be given to STOMATE's carbon offline forcing file   ||  OK_STOMATE ||  
    282313 ||  STOMATE_FORCING_MEMSIZE  ||  50  ||  [MegaBytes]  ||  Size of STOMATE forcing data in memory   ||  This variable determines how many forcing states will be kept in memory.  Must be a compromise between memory  use and frequeny of disk access.   ||  OK_STOMATE ||  
     
    290321 ||  TAU_FRUIT  ||  undef, 90., 90., 90., 90., 90., 90., 90., 90., undef, undef, undef, undef  ||  [days]  ||  fruit lifetime  ||   ||  OK_STOMATE ||  
    291322 ||  TAU_SAP  ||  undef, 730., 730., 730., 730., 730., 730., 730., 730., undef, undef, undef, undef  ||  [days]  ||  sapwood -> heartwood conversion time  ||   ||  OK_STOMATE ||  
    292  ||  TCM_CRIT  ||  undef, undef, undef, 5.0, 15.5, 15.5, -8.0, -8.0, -8.0, undef, undef,  undef, undef  ||  [C]  ||  critical tcm, tabulated   ||   ||  OK_STOMATE ||  
     323 ||  TCM_CRIT  ||  undef, undef, undef, 5.0, 15.5, 15.5, -8.0, -8.0, -8.0, undef, undef, undef  ||  [C]  ||  critical tcm, tabulated   ||   ||  OK_STOMATE ||  
    293324 ||  TMIN_CRIT  ||  undef,  0.0, 0.0, -30.0, -14.0, -30.0, -45.0, -45.0, undef, undef, undef, undef, undef  ||  [C]  ||  critical tmin, tabulated  ||    ||  OK_STOMATE ||  
    294325 ||  TOO_LONG   ||  5.  ||  [days]     ||  longest sustainable time without regeneration (vernalization)  ||    ||  OK_STOMATE ||  
     
    298329 ||  TPHOTO_MIN_A  ||  undef,  0., 0., 0., 0., 0., 0.,  0., 0.,  0.0025, 0., 0., 0.   ||  [-]  ||  minimum photosynthesis temperature, constant a of ax^2+bx+c (deg C), tabulated  ||   ||  OK_STOMATE ||  
    299330 ||  TPHOTO_MIN_B  ||  undef,  0.,  0., 0., 0., 0., 0., 0., 0., 0.1, 0.,0.,0.  ||  [-]  ||  minimum photosynthesis temperature, constant b of ax^2+bx+c (deg C), tabulated  ||   ||  OK_STOMATE ||  
    300  ||  TPHOTO_MIN_C  ||  undef,  2., 2., -4., -3.,-2.,-4., -4.,-4.,-3.25, 13.,-5.,13.  ||  [-]  ||  minimum photosynthesis temperature, constant c of ax^2+bx+c (deg C), tabulated  ||   ||  OK_STOMATE ||  
     331 ||  TPHOTO_MIN_C  ||  undef,  2., 2., -4., -3.,-2.,-4., -4., -4., -3.25, 13.,-5.,13.  ||  [-]  ||  minimum photosynthesis temperature, constant c of ax^2+bx+c (deg C), tabulated  ||   ||  OK_STOMATE ||  
    301332 ||  TPHOTO_OPT_A  ||  undef, 0., 0., 0., 0., 0., 0., 0., 0., 0.0025, 0., 0., 0.   ||  [-]  ||  optimum photosynthesis temperature, constant a of ax^2+bx+c (deg C), tabulated  ||    ||  OK_STOMATE ||  
    302333 ||  TPHOTO_OPT_B  ||  undef, 0., 0., 0., 0., 0., 0., 0., 0., 0.25, 0., 0., 0.    ||  [-]  ||  optimum photosynthesis temperature, constant b of ax^2+bx+c (deg C), tabulated  ||   ||  OK_STOMATE ||