# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-07-09T06:11:03+02:00 Fri, 02 Apr 2021 12:59:41 GMT sebastiaan.luyssaert [7141] Contributes to #651 and fixes some issues with delta13C. Changes ... Thu, 01 Apr 2021 11:23:00 GMT sebastiaan.luyssaert [7140] Changed the default driver from CRUNCEP to CRUJRAv2.1 Fri, 19 Mar 2021 21:35:03 GMT sebastiaan.luyssaert [7134] Contributed to ticket #798 Fri, 19 Mar 2021 11:47:35 GMT bertrand.guenet [7133] A new output variables added Wed, 17 Mar 2021 19:28:15 GMT sebastiaan.luyssaert [7130] Added a variable to better evaluate the effects of recruitment Fri, 12 Mar 2021 12:51:18 GMT sebastiaan.luyssaert [7125] Parameters changes to make r7124 work. Changes contribute to ticket #698 Fri, 12 Mar 2021 11:06:17 GMT sebastiaan.luyssaert [7124] Bug corrcetion for the calculation of labile_target. Contributes to #698 Fri, 12 Mar 2021 08:46:13 GMT fabienne.maignan [7121] We compute a N-normalisation factor coherent with a N-level content ... Thu, 11 Mar 2021 18:45:56 GMT sebastiaan.luyssaert [7120] Contrinutes to ticket #765 Thu, 11 Mar 2021 15:42:00 GMT sebastiaan.luyssaert [7119] Configuration files for the new driver. Contributes to ticket #730 Thu, 11 Mar 2021 12:51:49 GMT matthew.mcgrath [7117] Bug fix for background albedo of bare soil when using MODIS map Wed, 10 Mar 2021 07:39:15 GMT fabienne.maignan [7114] We remove the transmitted light factor from the computation of the ... Sat, 06 Mar 2021 17:00:50 GMT sebastiaan.luyssaert [7113] Fixes ticket #763 Fri, 05 Mar 2021 19:15:44 GMT sebastiaan.luyssaert [7112] Mover AddYears.ksh into a subfolder Fri, 05 Mar 2021 19:09:40 GMT sebastiaan.luyssaert [7111] Script to create additional years to make the new driver work Wed, 03 Mar 2021 08:17:46 GMT sebastiaan.luyssaert [7106] Unit corrections for NBP and its cross checks and refinements for ... Mon, 22 Feb 2021 10:47:25 GMT sebastiaan.luyssaert [7103] Changes contributing to ticket #759 Tue, 16 Feb 2021 16:39:53 GMT sebastiaan.luyssaert [7089] bug correction on qsurf introduced in rev [6019]. See ticket #762 Tue, 16 Feb 2021 16:38:24 GMT sebastiaan.luyssaert [7088] Changes contributing gto ticket #728 proposed by Chao Yue Tue, 16 Feb 2021 14:38:37 GMT matthew.mcgrath [7083] Adding an option to use dominant vegetation height in calculating ... Tue, 16 Feb 2021 10:56:39 GMT sebastiaan.luyssaert [7082] Fix to make the analytical spinup work with the new driver Tue, 16 Feb 2021 10:54:14 GMT sebastiaan.luyssaert [7081] Fix to make the analytical spinup work with the new driver Tue, 16 Feb 2021 10:32:36 GMT sebastiaan.luyssaert [7080] Changed self-thinning parameters of PFT8 and 9 to better account for ... Mon, 08 Feb 2021 14:55:38 GMT sebastiaan.luyssaert [7065] Contributes to ticket #730 Fri, 05 Feb 2021 07:42:51 GMT sebastiaan.luyssaert [7058] fixes consistency cross-check for nbp for vertical soil discretization. ... Thu, 04 Feb 2021 19:27:53 GMT sebastiaan.luyssaert [7057] fixes ticket #756 and contributes to ticket #759 Thu, 04 Feb 2021 16:06:48 GMT matthew.mcgrath [7056] Ticket 745: correcting some monitoring files Thu, 04 Feb 2021 15:57:39 GMT matthew.mcgrath [7055] Fixing the soil carbon output variable, and changing the default output ... Tue, 02 Feb 2021 18:51:23 GMT matthew.mcgrath [7041] Improvement in monitoring variables in response to ticket 745 Mon, 01 Feb 2021 08:45:36 GMT sebastiaan.luyssaert [7033] Externalized the ratio of Rm/GP and added bm_alloc for labile and ... Fri, 22 Jan 2021 12:00:26 GMT sebastiaan.luyssaert [7015] revert some changes that should not have been committed Thu, 21 Jan 2021 15:54:48 GMT sebastiaan.luyssaert [7013] VCMAX25 is no longer used in stomate. Its default values are still used ... Thu, 21 Jan 2021 15:40:03 GMT sebastiaan.luyssaert [7012] Use ratio between Rm/GPP to trigger senescence for grasslands Thu, 21 Jan 2021 11:33:39 GMT sebastiaan.luyssaert [7011] Final changes for #744 (stomate.f90 and stomate_io.f90) and some ... Wed, 20 Jan 2021 21:16:41 GMT sebastiaan.luyssaert [7010] contributes to #744 Wed, 20 Jan 2021 16:22:38 GMT sebastiaan.luyssaert [7009] Contributes to #744. Restores the capability to run the nbp cross- ... Wed, 20 Jan 2021 13:07:43 GMT sebastiaan.luyssaert [7006] contributes to ticket #744 Wed, 20 Jan 2021 12:35:53 GMT sebastiaan.luyssaert [7005] Finalize ticket #739, adjust configuration to r7004 Wed, 20 Jan 2021 12:20:22 GMT sebastiaan.luyssaert [7004] Fixes ticket #739 and contributes to #749 Thu, 14 Jan 2021 15:04:54 GMT sebastiaan.luyssaert [6999] Contributing to #744. Made the two consistency checks for nbp more ... Thu, 14 Jan 2021 09:59:37 GMT sebastiaan.luyssaert [6998] Contributes to ticket #744 Wed, 13 Jan 2021 19:46:21 GMT matthew.mcgrath [6997] Printing the effective LAI in the sechiba history files to enable ... Tue, 12 Jan 2021 19:07:14 GMT matthew.mcgrath [6995] A couple small uninitialized variable bugfixes Thu, 07 Jan 2021 13:10:47 GMT sebastiaan.luyssaert [6988] Contributes to ticket #744 but does not finalizes it yet. Also fixes two ... Thu, 31 Dec 2020 13:21:42 GMT sebastiaan.luyssaert [6986] Copied and adjusted FG3nd as the starting point for a French ... Wed, 30 Dec 2020 16:09:17 GMT matthew.mcgrath [6985] Bug fix: unitialized variables in stomate, ticket 752 Tue, 29 Dec 2020 16:56:45 GMT sebastiaan.luyssaert [6984] Restores restartability of the model. Fixes ticket #750 Tue, 29 Dec 2020 09:20:50 GMT sebastiaan.luyssaert [6982] Contributes to ticket #744. Consistency cross-checking for analytical ... Mon, 28 Dec 2020 11:30:55 GMT sebastiaan.luyssaert [6981] Integrated ipresenescence in plant_status. Changes proposed by Guillaume ... Sat, 26 Dec 2020 07:05:38 GMT matthew.mcgrath [6980] Bug fix: Clash in naming NEP variables in output. Fri, 25 Dec 2020 23:40:52 GMT sebastiaan.luyssaert [6979] Fixes ticket #751 Tue, 22 Dec 2020 14:17:14 GMT sebastiaan.luyssaert [6978] Refined parameters after global 240 year long spinup Tue, 22 Dec 2020 13:12:36 GMT sebastiaan.luyssaert [6977] Added consistency cross checking for NBP. Added dimensions to prod, flux ... Tue, 22 Dec 2020 11:07:56 GMT sebastiaan.luyssaert [6976] Parameter changes contributing to #743 Tue, 22 Dec 2020 10:53:24 GMT sebastiaan.luyssaert [6975] Parameter change contributing to #743 Fri, 11 Dec 2020 08:01:54 GMT sebastiaan.luyssaert [6963] Making maintanance respiration a function of labile rather than the ... Thu, 10 Dec 2020 19:33:22 GMT sebastiaan.luyssaert [6962] Parameter values to work with the cn-approach of calculating maintanance ... Thu, 10 Dec 2020 19:31:32 GMT sebastiaan.luyssaert [6961] Small fixes of the calculation of maintanance respiration Tue, 08 Dec 2020 14:35:42 GMT agnes.ducharne [6960] Example script and README to downscale CRUJRA at 0.5-deg to the ISPL- ... Fri, 04 Dec 2020 16:23:40 GMT matthew.mcgrath [6959] Modifying a couple more variables in post-processing which no longer ... Fri, 04 Dec 2020 16:04:13 GMT matthew.mcgrath [6958] Modifying post-processing files to work with current variable names Thu, 03 Dec 2020 18:53:34 GMT sebastiaan.luyssaert [6956] Parameter values to work with the new default for maint_resp_control as ... Thu, 03 Dec 2020 18:52:36 GMT sebastiaan.luyssaert [6955] Changed default value for maint_resp_control to be in line with ORCHIDEE ... Fri, 27 Nov 2020 13:55:07 GMT sebastiaan.luyssaert [6947] Introduced a pre-senescence phase and made senescene dependent on the ... Fri, 27 Nov 2020 09:59:58 GMT sebastiaan.luyssaert [6946] revert soil parameters to their settings prior to r6916. See ticket #736 ... Thu, 26 Nov 2020 08:02:30 GMT sebastiaan.luyssaert [6945] Bug fix for the phenology of PFT3 contributes to ticket #714 Tue, 24 Nov 2020 17:01:53 GMT sebastiaan.luyssaert [6944] Reduced to output levels to decrease memory use. Contributes to #734 Tue, 24 Nov 2020 16:35:29 GMT sebastiaan.luyssaert [6943] Making sure that there are 4d variables at history level 1. Contributes ... Tue, 24 Nov 2020 09:47:41 GMT sebastiaan.luyssaert [6942] Correctly initialize xios for variables that are written within an ... Mon, 16 Nov 2020 09:34:31 GMT sebastiaan.luyssaert [6936] Configuration for the transient simulation with the new driver. This ... Thu, 12 Nov 2020 13:02:10 GMT bertrand.guenet [6934] Adding soil and litter turnover variables Thu, 12 Nov 2020 12:25:30 GMT sebastiaan.luyssaert [6933] Externalized the parameters that link crown diameter to tree height. ... Wed, 11 Nov 2020 17:13:01 GMT sebastiaan.luyssaert [6932] Fixes ticket #733. The new albedo scheme calculates the surface albedo. ... Tue, 10 Nov 2020 13:16:36 GMT sebastiaan.luyssaert [6931] Fixes ticket #727. Tested for all four combinations of impose_cn and ... Fri, 06 Nov 2020 15:46:34 GMT matthew.mcgrath [6930] DEV: Bug fix, Irene complained about type mismatch Wed, 04 Nov 2020 12:59:56 GMT sebastiaan.luyssaert [6925] Fixes ticket #732 Tue, 03 Nov 2020 21:12:36 GMT sebastiaan.luyssaert [6924] Configuration to spinup the model with the new driver. Not fully working ... Tue, 03 Nov 2020 18:11:16 GMT sebastiaan.luyssaert [6923] Adjusted the parameters to enhance the consistency between tree height ... Tue, 03 Nov 2020 18:10:04 GMT sebastiaan.luyssaert [6922] Enhanced the consistency between tree height and crown diameter. This ... Tue, 03 Nov 2020 16:34:49 GMT sebastiaan.luyssaert [6921] Bug fix in the calculation of nep and nbp Sun, 01 Nov 2020 12:00:59 GMT sebastiaan.luyssaert [6918] Added fail safe option for phenology (ok_force_pheno) required a partial ... Fri, 30 Oct 2020 14:54:55 GMT sebastiaan.luyssaert [6917] Fixes ticket #718 Fri, 30 Oct 2020 12:21:30 GMT sebastiaan.luyssaert [6916] Changed soil parameters in line with r6862 Mon, 26 Oct 2020 17:48:56 GMT sebastiaan.luyssaert [6913] Maintenance respiration can now be calculated as a function of nitrogen ... Sun, 25 Oct 2020 12:09:00 GMT sebastiaan.luyssaert [6910] Added history variables to better monitor phenology and set Larch ... Sun, 25 Oct 2020 12:06:45 GMT sebastiaan.luyssaert [6909] Refined parameters for several canopy variables Fri, 23 Oct 2020 13:11:49 GMT sebastiaan.luyssaert [6908] Bug fix. Added fruit turnover for grasses. Contributes to ticket #725 Fri, 16 Oct 2020 12:17:38 GMT sebastiaan.luyssaert [6904] LAI_MEAN is now annual mean LAI and is the same as LAI in Tag2.1 Fri, 16 Oct 2020 12:16:43 GMT sebastiaan.luyssaert [6903] Initial guess for some parameter values following code revisions in ... Tue, 13 Oct 2020 15:13:19 GMT sebastiaan.luyssaert [6901] Harmonized the variable names used to describe the relative soil ... Mon, 12 Oct 2020 07:58:29 GMT sebastiaan.luyssaert [6900] Enhanced consistency of the calculation of the target nitrogen and ... Fri, 09 Oct 2020 11:54:09 GMT sebastiaan.luyssaert [6898] Fixes ticket #726 - double use of a single variable name Thu, 08 Oct 2020 14:48:20 GMT sebastiaan.luyssaert [6893] Bug fix in stomate_growth_fun_all.f90 and added variables mainly for ... Mon, 05 Oct 2020 07:39:31 GMT sebastiaan.luyssaert [6887] Resolved inconsistencies and duplications between longevity_leaf and ... Mon, 05 Oct 2020 07:38:38 GMT sebastiaan.luyssaert [6886] Resolved inconsistencies and duplications between longevity_leaf and ... Wed, 30 Sep 2020 21:26:59 GMT sebastiaan.luyssaert [6883] Added diagnostic output variables to xios to evaluate recruitment and ... Thu, 24 Sep 2020 13:27:17 GMT sebastiaan.luyssaert [6879] Setup for testing and evaluating Milestone 4.1. Settings were committed ... Thu, 24 Sep 2020 13:02:28 GMT sebastiaan.luyssaert [6878] Setup for testing and evaluating Milestone 4.1. Setting were committed ... Wed, 23 Sep 2020 14:44:23 GMT matthew.mcgrath [6877] Removing a confusing and redundant flag for recruitment Tue, 22 Sep 2020 13:57:50 GMT nicolas.vuichard [6876] update for ERA5