# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-09-07T10:24:06+02:00 Fri, 22 Jan 2021 12:00:26 GMT sebastiaan.luyssaert [7015] revert some changes that should not have been committed Thu, 21 Jan 2021 15:54:48 GMT sebastiaan.luyssaert [7013] VCMAX25 is no longer used in stomate. Its default values are still used ... Thu, 21 Jan 2021 15:40:03 GMT sebastiaan.luyssaert [7012] Use ratio between Rm/GPP to trigger senescence for grasslands Thu, 21 Jan 2021 11:33:39 GMT sebastiaan.luyssaert [7011] Final changes for #744 (stomate.f90 and stomate_io.f90) and some ... Wed, 20 Jan 2021 21:16:41 GMT sebastiaan.luyssaert [7010] contributes to #744 Wed, 20 Jan 2021 16:22:38 GMT sebastiaan.luyssaert [7009] Contributes to #744. Restores the capability to run the nbp cross- ... Wed, 20 Jan 2021 13:07:43 GMT sebastiaan.luyssaert [7006] contributes to ticket #744 Wed, 20 Jan 2021 12:35:53 GMT sebastiaan.luyssaert [7005] Finalize ticket #739, adjust configuration to r7004 Wed, 20 Jan 2021 12:20:22 GMT sebastiaan.luyssaert [7004] Fixes ticket #739 and contributes to #749 Thu, 14 Jan 2021 15:04:54 GMT sebastiaan.luyssaert [6999] Contributing to #744. Made the two consistency checks for nbp more ... Thu, 14 Jan 2021 09:59:37 GMT sebastiaan.luyssaert [6998] Contributes to ticket #744 Wed, 13 Jan 2021 19:46:21 GMT matthew.mcgrath [6997] Printing the effective LAI in the sechiba history files to enable ... Tue, 12 Jan 2021 19:07:14 GMT matthew.mcgrath [6995] A couple small uninitialized variable bugfixes Thu, 07 Jan 2021 13:10:47 GMT sebastiaan.luyssaert [6988] Contributes to ticket #744 but does not finalizes it yet. Also fixes two ... Thu, 31 Dec 2020 13:21:42 GMT sebastiaan.luyssaert [6986] Copied and adjusted FG3nd as the starting point for a French ... Wed, 30 Dec 2020 16:09:17 GMT matthew.mcgrath [6985] Bug fix: unitialized variables in stomate, ticket 752 Tue, 29 Dec 2020 16:56:45 GMT sebastiaan.luyssaert [6984] Restores restartability of the model. Fixes ticket #750 Tue, 29 Dec 2020 09:20:50 GMT sebastiaan.luyssaert [6982] Contributes to ticket #744. Consistency cross-checking for analytical ... Mon, 28 Dec 2020 11:30:55 GMT sebastiaan.luyssaert [6981] Integrated ipresenescence in plant_status. Changes proposed by Guillaume ... Sat, 26 Dec 2020 07:05:38 GMT matthew.mcgrath [6980] Bug fix: Clash in naming NEP variables in output. Fri, 25 Dec 2020 23:40:52 GMT sebastiaan.luyssaert [6979] Fixes ticket #751 Tue, 22 Dec 2020 14:17:14 GMT sebastiaan.luyssaert [6978] Refined parameters after global 240 year long spinup Tue, 22 Dec 2020 13:12:36 GMT sebastiaan.luyssaert [6977] Added consistency cross checking for NBP. Added dimensions to prod, flux ... Tue, 22 Dec 2020 11:07:56 GMT sebastiaan.luyssaert [6976] Parameter changes contributing to #743 Tue, 22 Dec 2020 10:53:24 GMT sebastiaan.luyssaert [6975] Parameter change contributing to #743 Fri, 11 Dec 2020 08:01:54 GMT sebastiaan.luyssaert [6963] Making maintanance respiration a function of labile rather than the ... Thu, 10 Dec 2020 19:33:22 GMT sebastiaan.luyssaert [6962] Parameter values to work with the cn-approach of calculating maintanance ... Thu, 10 Dec 2020 19:31:32 GMT sebastiaan.luyssaert [6961] Small fixes of the calculation of maintanance respiration Tue, 08 Dec 2020 14:35:42 GMT agnes.ducharne [6960] Example script and README to downscale CRUJRA at 0.5-deg to the ISPL- ... Fri, 04 Dec 2020 16:23:40 GMT matthew.mcgrath [6959] Modifying a couple more variables in post-processing which no longer ... Fri, 04 Dec 2020 16:04:13 GMT matthew.mcgrath [6958] Modifying post-processing files to work with current variable names Thu, 03 Dec 2020 18:53:34 GMT sebastiaan.luyssaert [6956] Parameter values to work with the new default for maint_resp_control as ... Thu, 03 Dec 2020 18:52:36 GMT sebastiaan.luyssaert [6955] Changed default value for maint_resp_control to be in line with ORCHIDEE ... Fri, 27 Nov 2020 13:55:07 GMT sebastiaan.luyssaert [6947] Introduced a pre-senescence phase and made senescene dependent on the ... Fri, 27 Nov 2020 09:59:58 GMT sebastiaan.luyssaert [6946] revert soil parameters to their settings prior to r6916. See ticket #736 ... Thu, 26 Nov 2020 08:02:30 GMT sebastiaan.luyssaert [6945] Bug fix for the phenology of PFT3 contributes to ticket #714 Tue, 24 Nov 2020 17:01:53 GMT sebastiaan.luyssaert [6944] Reduced to output levels to decrease memory use. Contributes to #734 Tue, 24 Nov 2020 16:35:29 GMT sebastiaan.luyssaert [6943] Making sure that there are 4d variables at history level 1. Contributes ... Tue, 24 Nov 2020 09:47:41 GMT sebastiaan.luyssaert [6942] Correctly initialize xios for variables that are written within an ... Mon, 16 Nov 2020 09:34:31 GMT sebastiaan.luyssaert [6936] Configuration for the transient simulation with the new driver. This ... Thu, 12 Nov 2020 13:02:10 GMT bertrand.guenet [6934] Adding soil and litter turnover variables Thu, 12 Nov 2020 12:25:30 GMT sebastiaan.luyssaert [6933] Externalized the parameters that link crown diameter to tree height. ... Wed, 11 Nov 2020 17:13:01 GMT sebastiaan.luyssaert [6932] Fixes ticket #733. The new albedo scheme calculates the surface albedo. ... Tue, 10 Nov 2020 13:16:36 GMT sebastiaan.luyssaert [6931] Fixes ticket #727. Tested for all four combinations of impose_cn and ... Fri, 06 Nov 2020 15:46:34 GMT matthew.mcgrath [6930] DEV: Bug fix, Irene complained about type mismatch Wed, 04 Nov 2020 12:59:56 GMT sebastiaan.luyssaert [6925] Fixes ticket #732 Tue, 03 Nov 2020 21:12:36 GMT sebastiaan.luyssaert [6924] Configuration to spinup the model with the new driver. Not fully working ... Tue, 03 Nov 2020 18:11:16 GMT sebastiaan.luyssaert [6923] Adjusted the parameters to enhance the consistency between tree height ... Tue, 03 Nov 2020 18:10:04 GMT sebastiaan.luyssaert [6922] Enhanced the consistency between tree height and crown diameter. This ... Tue, 03 Nov 2020 16:34:49 GMT sebastiaan.luyssaert [6921] Bug fix in the calculation of nep and nbp Sun, 01 Nov 2020 12:00:59 GMT sebastiaan.luyssaert [6918] Added fail safe option for phenology (ok_force_pheno) required a partial ... Fri, 30 Oct 2020 14:54:55 GMT sebastiaan.luyssaert [6917] Fixes ticket #718 Fri, 30 Oct 2020 12:21:30 GMT sebastiaan.luyssaert [6916] Changed soil parameters in line with r6862 Mon, 26 Oct 2020 17:48:56 GMT sebastiaan.luyssaert [6913] Maintenance respiration can now be calculated as a function of nitrogen ... Sun, 25 Oct 2020 12:09:00 GMT sebastiaan.luyssaert [6910] Added history variables to better monitor phenology and set Larch ... Sun, 25 Oct 2020 12:06:45 GMT sebastiaan.luyssaert [6909] Refined parameters for several canopy variables Fri, 23 Oct 2020 13:11:49 GMT sebastiaan.luyssaert [6908] Bug fix. Added fruit turnover for grasses. Contributes to ticket #725 Fri, 16 Oct 2020 12:17:38 GMT sebastiaan.luyssaert [6904] LAI_MEAN is now annual mean LAI and is the same as LAI in Tag2.1 Fri, 16 Oct 2020 12:16:43 GMT sebastiaan.luyssaert [6903] Initial guess for some parameter values following code revisions in ... Tue, 13 Oct 2020 15:13:19 GMT sebastiaan.luyssaert [6901] Harmonized the variable names used to describe the relative soil ... Mon, 12 Oct 2020 07:58:29 GMT sebastiaan.luyssaert [6900] Enhanced consistency of the calculation of the target nitrogen and ... Fri, 09 Oct 2020 11:54:09 GMT sebastiaan.luyssaert [6898] Fixes ticket #726 - double use of a single variable name Thu, 08 Oct 2020 14:48:20 GMT sebastiaan.luyssaert [6893] Bug fix in stomate_growth_fun_all.f90 and added variables mainly for ... Mon, 05 Oct 2020 07:39:31 GMT sebastiaan.luyssaert [6887] Resolved inconsistencies and duplications between longevity_leaf and ... Mon, 05 Oct 2020 07:38:38 GMT sebastiaan.luyssaert [6886] Resolved inconsistencies and duplications between longevity_leaf and ... Wed, 30 Sep 2020 21:26:59 GMT sebastiaan.luyssaert [6883] Added diagnostic output variables to xios to evaluate recruitment and ... Thu, 24 Sep 2020 13:27:17 GMT sebastiaan.luyssaert [6879] Setup for testing and evaluating Milestone 4.1. Settings were committed ... Thu, 24 Sep 2020 13:02:28 GMT sebastiaan.luyssaert [6878] Setup for testing and evaluating Milestone 4.1. Setting were committed ... Wed, 23 Sep 2020 14:44:23 GMT matthew.mcgrath [6877] Removing a confusing and redundant flag for recruitment Tue, 22 Sep 2020 13:57:50 GMT nicolas.vuichard [6876] update for ERA5 Tue, 22 Sep 2020 13:45:41 GMT nicolas.vuichard [6875] update fluxnet_data Thu, 17 Sep 2020 11:18:31 GMT matthew.mcgrath [6874] Typo fix from previous commit Thu, 17 Sep 2020 11:13:45 GMT matthew.mcgrath [6873] Getting better LAI behavior with PFT7, NeedleleafEvergreenBoreal Fri, 11 Sep 2020 13:37:20 GMT matthew.mcgrath [6871] Bug fix for ticket #722 Fri, 11 Sep 2020 09:31:15 GMT matthew.mcgrath [6870] It seems changeset 6868 was overwritten by 6869. Redoing. Fri, 11 Sep 2020 08:01:04 GMT sebastiaan.luyssaert [6869] DEV: tested on a 3x3 region. The N content of the reserve pool now ... Fri, 11 Sep 2020 07:34:04 GMT matthew.mcgrath [6868] Bug fix for ticket #719 on mass balance closure in FG1trans Fri, 24 Jul 2020 09:00:03 GMT anne.cozic [6854] Scripts created by Vladislav Bastrikov to generate CRUJRA forcing stored ... Tue, 07 Jul 2020 09:38:52 GMT sebastiaan.luyssaert [6831] Tuned parameters for MTC2 Mon, 06 Jul 2020 13:04:47 GMT sebastiaan.luyssaert [6829] Fixes the mass balance check in dim_product_use. Contributes to ticket ... Fri, 03 Jul 2020 13:36:06 GMT sebastiaan.luyssaert [6826] Tuned parameters for MTC4 Fri, 03 Jul 2020 11:50:35 GMT sebastiaan.luyssaert [6825] DEV: added N-mobility between the reserve and the labile pool. This ... Thu, 02 Jul 2020 15:34:46 GMT sebastiaan.luyssaert [6824] DEV: added the option to calculate the root density in hydraulic_arch ... Mon, 29 Jun 2020 09:16:10 GMT sebastiaan.luyssaert [6823] Change default for product use until ticket #702 can be closed. ... Mon, 29 Jun 2020 09:13:37 GMT sebastiaan.luyssaert [6822] Code changes fix problems with the fluxes from the product pools. ... Fri, 26 Jun 2020 19:45:20 GMT sebastiaan.luyssaert [6821] Development: sapwood mortality from hydraulic failure. Removed output ... Fri, 26 Jun 2020 15:04:52 GMT sebastiaan.luyssaert [6819] Development: sapwood mortality from hydraulic failure. The code can be ... Fri, 26 Jun 2020 09:19:37 GMT sebastiaan.luyssaert [6818] Fixes contributing to ticket #712 related to water buget closure. These ... Wed, 24 Jun 2020 16:02:48 GMT sebastiaan.luyssaert [6817] defined default value Wed, 24 Jun 2020 08:59:56 GMT sebastiaan.luyssaert [6816] Changes contribute to restoring water budget closure of the model. See ... Mon, 22 Jun 2020 05:08:53 GMT bertrand.guenet [6815] bug in the parallelization solved Sat, 13 Jun 2020 17:49:12 GMT sebastiaan.luyssaert [6813] Tuned parameters for MTC 2 Sat, 06 Jun 2020 13:16:40 GMT sebastiaan.luyssaert [6810] Additional output variables to evaluate stand dynamics Sat, 06 Jun 2020 13:16:10 GMT sebastiaan.luyssaert [6809] Bug correction for using FM maps during the spinup Fri, 05 Jun 2020 15:35:40 GMT sebastiaan.luyssaert [6808] Use FM maps in FG1 and FG1trans. These changes contribute to ticket #647 Fri, 05 Jun 2020 11:46:20 GMT sebastiaan.luyssaert [6807] Updated paths to DOFOCO maps, use FM maps in FG2. These changes ... Thu, 04 Jun 2020 09:42:13 GMT sebastiaan.luyssaert [6804] Contributes to #700. Fixes a bug introduced in r6727. Changes proposed ... Mon, 01 Jun 2020 15:27:03 GMT sebastiaan.luyssaert [6802] Bug corrections for changes made in r6799 Thu, 28 May 2020 20:00:53 GMT sebastiaan.luyssaert [6801] Added two fail safe option in stomate_turnover to ensure that deciduous ... Thu, 28 May 2020 19:16:19 GMT sebastiaan.luyssaert [6800] Parameter changes to make r6799 work. These changes contribute to ticket ...