# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-07-29T14:51:18+02:00 Wed, 24 Jun 2020 16:02:48 GMT sebastiaan.luyssaert [6817] defined default value Wed, 24 Jun 2020 08:59:56 GMT sebastiaan.luyssaert [6816] Changes contribute to restoring water budget closure of the model. See ... Mon, 22 Jun 2020 05:08:53 GMT bertrand.guenet [6815] bug in the parallelization solved Sat, 13 Jun 2020 17:49:12 GMT sebastiaan.luyssaert [6813] Tuned parameters for MTC 2 Sat, 06 Jun 2020 13:16:40 GMT sebastiaan.luyssaert [6810] Additional output variables to evaluate stand dynamics Sat, 06 Jun 2020 13:16:10 GMT sebastiaan.luyssaert [6809] Bug correction for using FM maps during the spinup Fri, 05 Jun 2020 15:35:40 GMT sebastiaan.luyssaert [6808] Use FM maps in FG1 and FG1trans. These changes contribute to ticket #647 Fri, 05 Jun 2020 11:46:20 GMT sebastiaan.luyssaert [6807] Updated paths to DOFOCO maps, use FM maps in FG2. These changes ... Thu, 04 Jun 2020 09:42:13 GMT sebastiaan.luyssaert [6804] Contributes to #700. Fixes a bug introduced in r6727. Changes proposed ... Mon, 01 Jun 2020 15:27:03 GMT sebastiaan.luyssaert [6802] Bug corrections for changes made in r6799 Thu, 28 May 2020 20:00:53 GMT sebastiaan.luyssaert [6801] Added two fail safe option in stomate_turnover to ensure that deciduous ... Thu, 28 May 2020 19:16:19 GMT sebastiaan.luyssaert [6800] Parameter changes to make r6799 work. These changes contribute to ticket ... Thu, 28 May 2020 17:50:13 GMT sebastiaan.luyssaert [6799] Code changes in line with the issues described in ticket #666. The ... Tue, 19 May 2020 11:53:52 GMT sebastiaan.luyssaert [6798] Bug fix contributing to ticket #709 Thu, 14 May 2020 16:43:55 GMT sebastiaan.luyssaert [6797] Refined a few comments in the calculation of hydraulic acrhitecture Wed, 13 May 2020 13:41:47 GMT sebastiaan.luyssaert [6794] Implemented changeset 6782: plant N uptake is now a function of longterm ... Wed, 13 May 2020 13:35:18 GMT sebastiaan.luyssaert [6793] Commented out histwrites that were not accompanied by a histdef Tue, 12 May 2020 10:40:56 GMT sebastiaan.luyssaert [6788] Set som_turn_islow to the same value currently used in ORCHIDEE Tag 2.0 Mon, 11 May 2020 16:06:48 GMT sebastiaan.luyssaert [6787] Implemented changeset 6781: externalizing parameter defining the ... Fri, 08 May 2020 15:51:12 GMT sebastiaan.luyssaert [6785] linked ok_bare_soil_new to the different settings of energy_control to ... Fri, 08 May 2020 09:23:25 GMT sebastiaan.luyssaert [6783] The default for do_rsoil has been changed to TRUE because it was found ... Fri, 01 May 2020 07:12:07 GMT matthew.mcgrath [6766] Jina's fix for evaporation being much higher than transpiration: tickets ... Thu, 30 Apr 2020 13:47:48 GMT sebastiaan.luyssaert [6765] Changed MTC parameters to obtain acceptable GPP and LAI values. Values ... Thu, 30 Apr 2020 07:04:46 GMT matthew.mcgrath [6762] Printing out more information in a crash on heterotrophic respiration Sat, 25 Apr 2020 15:21:41 GMT sebastiaan.luyssaert [6757] Simplified parameterization: for grasses and cropland height_init_min ... Wed, 22 Apr 2020 07:06:08 GMT sebastiaan.luyssaert [6743] Renamed tau_leaf, tau_sap and tau_root as longevity_leaf, longevity_sap ... Wed, 22 Apr 2020 06:59:26 GMT sebastiaan.luyssaert [6742] Renamed tau_leaf, tau_sap and tau_root as longevity_leaf, longevity_sap ... Tue, 21 Apr 2020 12:17:28 GMT sebastiaan.luyssaert [6741] removed the parameter leaflife_tab. Leaflife_tab (for the dgvm) and ... Tue, 21 Apr 2020 12:13:33 GMT sebastiaan.luyssaert [6740] Split LAI into LAI_MEAN and LAI_MAX in the stomate history files. No ... Sun, 19 Apr 2020 17:23:39 GMT sebastiaan.luyssaert [6739] Accounting for the absence of leaves when writing LEAF_AGE, VCMAX and ... Fri, 17 Apr 2020 08:27:57 GMT sebastiaan.luyssaert [6738] Edited the documentation of the script Thu, 16 Apr 2020 14:09:42 GMT sebastiaan.luyssaert [6736] Added the author name to the script Thu, 16 Apr 2020 14:06:45 GMT sebastiaan.luyssaert [6735] First version of a script to extract restarts with a limited spatial ... Tue, 14 Apr 2020 08:00:29 GMT bertrand.guenet [6732] bug correction related to the writing of stomate_Cforcing Sat, 11 Apr 2020 16:49:57 GMT sebastiaan.luyssaert [6730] Fixes a problem with grassland and cropland senescence. See ticket #704 Fri, 10 Apr 2020 13:03:54 GMT sebastiaan.luyssaert [6728] Revision r6723 contained the wrong revision number resulting in poor ... Fri, 10 Apr 2020 11:49:52 GMT sebastiaan.luyssaert [6727] Resolves ticket #700 by only using daytime values when the average ... Fri, 10 Apr 2020 11:24:03 GMT sebastiaan.luyssaert [6726] Corrects an oversight in r6720 where the code tried to send an ... Fri, 10 Apr 2020 09:35:51 GMT sebastiaan.luyssaert [6724] Added documentation concerning IOS in the config.card Fri, 10 Apr 2020 09:28:52 GMT sebastiaan.luyssaert [6723] Defines a harvest ratio for grasses following the externalization of ... Thu, 09 Apr 2020 14:59:32 GMT sebastiaan.luyssaert [6721] Prevent the recalculation of gpp to happen when the canopy is very small ... Thu, 09 Apr 2020 14:30:45 GMT sebastiaan.luyssaert [6720] Added two diagnostic output variables to better track the calculation of ... Wed, 08 Apr 2020 13:25:48 GMT sebastiaan.luyssaert [6718] Changes close the mass balance for CO2 in ... Mon, 06 Apr 2020 11:44:42 GMT josefine.ghattas [6708] Changed to source init/bash which is more coherent with bash script. But ... Fri, 03 Apr 2020 10:33:11 GMT josefine.ghattas [6707] Remved module list before source of arch.env file because this command ... Thu, 02 Apr 2020 07:55:50 GMT josefine.ghattas [6700] All variables passed by arguments must be alloacated even if they are ... Thu, 02 Apr 2020 07:24:28 GMT sebastiaan.luyssaert [6699] Changes to read the new global forest management as well as the previous ... Wed, 01 Apr 2020 14:21:19 GMT sebastiaan.luyssaert [6698] First version of the scripts used to make global forest management maps ... Wed, 01 Apr 2020 12:40:11 GMT josefine.ghattas [6697] Use a intermediate variable to avoid problem in debug mode at Jean- Zay, ... Wed, 01 Apr 2020 10:54:37 GMT josefine.ghattas [6696] Correction: the internal parantesis (flux_s(:,:,icarbon,:) + ... Tue, 31 Mar 2020 16:54:03 GMT josefine.ghattas [6695] Add debug option to remove check on tempory variable. This check takes ... Mon, 30 Mar 2020 08:34:03 GMT josefine.ghattas [6684] Correction since commit [6681], do not compile at irene (ok at obelix) ... Sun, 29 Mar 2020 18:57:53 GMT sebastiaan.luyssaert [6682] Refitted the alpha and beta self-thinning parameters for all PFTs. The ... Sat, 28 Mar 2020 10:56:44 GMT sebastiaan.luyssaert [6681] Closes ticket 686. grad_thin and n_self_thin were made pft-dependent. ... Fri, 27 Mar 2020 16:54:35 GMT josefine.ghattas [6678] Commented parameters which are default values Fri, 27 Mar 2020 16:35:36 GMT josefine.ghattas [6677] Remove -l and add source of script needed at obelix to acces module ... Thu, 26 Mar 2020 17:52:54 GMT josefine.ghattas [6669] Updated version of PFTmap for FG4 experiment, now use v2 instead of v1. ... Thu, 26 Mar 2020 14:30:35 GMT josefine.ghattas [6668] Distinquish between fcm_arch=X64_IRENE used at Irene Skylake and ... Thu, 26 Mar 2020 14:27:13 GMT josefine.ghattas [6667] Copied from IPSLCM6.2 Wed, 25 Mar 2020 16:16:37 GMT sebastiaan.luyssaert [6666] Fixes ticket #693. The fix has been tested with a single processor for a ... Wed, 25 Mar 2020 15:33:51 GMT sebastiaan.luyssaert [6665] Small fix to write the correct variable into CCDELTABA Tue, 24 Mar 2020 16:06:01 GMT josefine.ghattas [6658] WriteFrequency only kept if running with XIOS=n in orchidee_ol.card Tue, 24 Mar 2020 08:13:49 GMT josefine.ghattas [6657] Resolution for problem with reading of XIOS when compilation done in ... Mon, 23 Mar 2020 15:44:19 GMT sebastiaan.luyssaert [6653] Externalized the harvest ratio for grasslands. Use a single pft- ... Mon, 23 Mar 2020 09:08:06 GMT josefine.ghattas [6652] Set last argument to .FALSE. to avoid crash of orchideedriver in ... Mon, 23 Mar 2020 08:37:39 GMT josefine.ghattas [6651] get_printlev is based on getin_p and needs to be done after CALL ... Fri, 20 Mar 2020 18:04:00 GMT josefine.ghattas [6650] Corrected error introduced in [6615] Fri, 20 Mar 2020 16:19:12 GMT josefine.ghattas [6649] - added comments, corrected comments and corrected defulat values in ... Thu, 19 Mar 2020 09:48:24 GMT sebastiaan.luyssaert [6646] roll back of unintended change in src_xml/field_def_orchidee.xml Thu, 19 Mar 2020 09:44:31 GMT sebastiaan.luyssaert [6645] DEV: the flag ok_write was defined twice: once as a local and once as a ... Tue, 17 Mar 2020 15:02:23 GMT sebastiaan.luyssaert [6631] DEV: fix for ticket #689 Tue, 17 Mar 2020 14:50:50 GMT josefine.ghattas [6630] Corrections in config.card should have been done at the same time as the ... Fri, 06 Mar 2020 14:58:54 GMT josefine.ghattas [6616] Add propset Fri, 06 Mar 2020 14:56:23 GMT josefine.ghattas [6615] Copied revision 6604 from branch ORCHIDEE-CN-CAN/ORCHIDEE_OL into the ... Fri, 06 Mar 2020 13:47:18 GMT josefine.ghattas [6614] Copy revison 6613 from branch ORCHIDEE-CN-CAN into the trunk. Thu, 05 Mar 2020 17:00:14 GMT josefine.ghattas [6608] Followed coding guidelines: remove mcs and mcfc as public variables in ... Thu, 05 Mar 2020 16:23:49 GMT josefine.ghattas [6607] Update of default values in comments and update of orchidee.default Thu, 05 Mar 2020 15:31:37 GMT nicolas.vuichard [6606] modify denitrification response to soil water content Wed, 04 Mar 2020 09:39:02 GMT josefine.ghattas [6595] Added arch files for IRENE-AMD new machine. Note that for ORCHIDEE, the ... Mon, 02 Mar 2020 16:02:12 GMT josefine.ghattas [6586] Correcte comments done by F. Maignan Mon, 02 Mar 2020 16:01:48 GMT josefine.ghattas [6585] Correct comments done by F. Maignan Fri, 28 Feb 2020 10:53:59 GMT josefine.ghattas [6577] Corrected comment Fri, 28 Feb 2020 10:06:24 GMT josefine.ghattas [6576] Moved CO2.txt file from ParametersFile to ListNonDel section This is ... Fri, 28 Feb 2020 09:33:45 GMT josefine.ghattas [6575] Removed echo which was not clear and not needed anymore Wed, 26 Feb 2020 14:14:57 GMT josefine.ghattas [6573] Update compile options to be used with XIOS/trunk revision 1857 or ... Wed, 26 Feb 2020 09:49:46 GMT josefine.ghattas [6572] - Removed possiblility to compile with makefile by removing AA_make and ... Wed, 26 Feb 2020 09:35:04 GMT josefine.ghattas [6570] - Add more comments in header section. - remove option no_driver: No use ... Tue, 25 Feb 2020 16:14:00 GMT josefine.ghattas [6568] Removed old AA_make and AA_make.ldef files. These files have not been ... Tue, 25 Feb 2020 16:09:35 GMT josefine.ghattas [6567] Remove temp_sol_pot, see ticket #628 Tue, 25 Feb 2020 11:39:50 GMT josefine.ghattas [6565] Corrected comment Mon, 24 Feb 2020 19:49:15 GMT josefine.ghattas [6564] Corected error in comment Mon, 24 Feb 2020 19:41:41 GMT josefine.ghattas [6563] Correction for compilation without MPI, for sequential use. Mon, 24 Feb 2020 19:31:10 GMT josefine.ghattas [6562] Remove example not fully available because these files do not exist in ... Mon, 24 Feb 2020 19:29:36 GMT josefine.ghattas [6561] - Change "bash" into "bash -l" : this is done to allow usage of module ... Thu, 13 Feb 2020 09:07:24 GMT josefine.ghattas [6532] Added name for climserv server, both loholt* and camelot are possible at ... Thu, 13 Feb 2020 08:02:29 GMT josefine.ghattas [6531] Force compilation with sequential netcdf library at ciclad and climserv Wed, 12 Feb 2020 17:34:10 GMT josefine.ghattas [6530] Add env file for CICLAD. Add comments in script. Wed, 12 Feb 2020 16:48:41 GMT josefine.ghattas [6529] Comment Wed, 12 Feb 2020 16:47:26 GMT josefine.ghattas [6528] Add env files for irene and jean-zay used with compilation script, see ... Wed, 12 Feb 2020 16:18:41 GMT josefine.ghattas [6527] Added first version of compilation script for ORCHIDEE offline ...