# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-07-09T00:52:43+02:00 Thu, 12 Dec 2019 16:30:17 GMT josefine.ghattas [6385] Interpolation using aggregate_p is now done in parallel. No change in ... Thu, 12 Dec 2019 10:38:54 GMT josefine.ghattas [6380] Removed diagnostic output variable leafci which was badly implemented. ... Wed, 04 Dec 2019 09:04:12 GMT josefine.ghattas [6373] Separate subroutines for land cover change and wood use. Done by S. ... Tue, 03 Dec 2019 08:19:27 GMT josefine.ghattas [6372] Remove subroutine hydrol_calculate_temp_hydro and the variable ... Fri, 29 Nov 2019 14:13:52 GMT josefine.ghattas [6366] Cut lines too long for gfortran Fri, 29 Nov 2019 13:55:14 GMT josefine.ghattas [6365] Corrected error on dimension and level introduced in previous commit ... Fri, 29 Nov 2019 12:53:47 GMT josefine.ghattas [6362] Correction of diagnostic variables rhSoil and rhLitter, done by B. ... Thu, 21 Nov 2019 08:37:31 GMT josefine.ghattas [6342] Corrected bug introduced by mistake in [6280]. This bug was making ... Mon, 18 Nov 2019 16:22:13 GMT josefine.ghattas [6335] Integrated changeset [6319] done previously in ORCHIDEE_2_2. See ticket ... Mon, 18 Nov 2019 09:56:36 GMT josefine.ghattas [6334] Changed name for local variable moistlimit into moisture_of_extinction ... Wed, 13 Nov 2019 07:43:23 GMT josefine.ghattas [6326] Correction for regional maps done by A Jornet, see ticket #122 . Thu, 07 Nov 2019 14:31:54 GMT josefine.ghattas [6302] Updated after the tool GENERATE_ORCHIDEE_DEFAULT has been updated to ... Thu, 07 Nov 2019 14:28:49 GMT josefine.ghattas [6301] Update script with new files also containing call to getin Mon, 04 Nov 2019 09:28:29 GMT josefine.ghattas [6290] As done in [6289]: Moved protection if is_omp_root inside subroutine ... Mon, 28 Oct 2019 11:15:46 GMT josefine.ghattas [6280] Following has been done by Albert Jornet in the trunk: * New: add ... Tue, 22 Oct 2019 14:29:12 GMT nicolas.vuichard [6267] * trunk/TOOLS/GENERATE_VEGET_MAP/ESA-LUH2/README.txt (added) * trunk/TOOLS/GENERATE_VEGET_MAP/ESA-LUH2/process_landusemap_19PFT_quarterdeg_final_temp_future.jnl (added) * trunk/TOOLS/GENERATE_VEGET_MAP/ESA-LUH2/process_landusemap_19PFT_quarterdeg_final_temp_future_2dstep.jnl (added) add README and scripts used for future scenarios Tue, 22 Oct 2019 14:12:26 GMT josefine.ghattas [6266] Remove usless call to tlen2itau. This call makes the model crash at ... Thu, 03 Oct 2019 15:13:15 GMT josefine.ghattas [6235] Bug correction, argument did not have correct dimension. See ticket #600 ... Tue, 01 Oct 2019 13:59:07 GMT josefine.ghattas [6229] Corrected path (R_BC not used anymore) and corrected comment. Mon, 30 Sep 2019 11:39:47 GMT josefine.ghattas [6224] Correcte bug introduced in changeset [6190]. Albert Jornet Mon, 30 Sep 2019 11:23:10 GMT josefine.ghattas [6222] Corrected error seens by gfortran Mon, 30 Sep 2019 11:19:58 GMT josefine.ghattas [6221] Cut too long lines for gfortran Mon, 30 Sep 2019 11:19:27 GMT josefine.ghattas [6220] Corrected unit in comments Thu, 26 Sep 2019 08:44:44 GMT josefine.ghattas [6216] Corrected error in filename introduced in previous commit [6214] Thu, 26 Sep 2019 08:19:44 GMT josefine.ghattas [6214] Change intput files from netcdf format classic to netcdf-4. This is the ... Wed, 25 Sep 2019 09:00:18 GMT josefine.ghattas [6210] Added arch files for Jean-Zay new computer at IDRIS Wed, 11 Sep 2019 08:54:23 GMT josefine.ghattas [6194] Modifications/corrections for soil carbon discretization option done by ... Tue, 10 Sep 2019 14:19:45 GMT josefine.ghattas [6190] Added more subroutines included in the interfaces for ... Thu, 05 Sep 2019 10:22:12 GMT josefine.ghattas [6188] Corrections done by A. Jornet. These errors crashed the model only in ... Mon, 02 Sep 2019 10:11:17 GMT josefine.ghattas [6186] Corrections for reading nudging variables with XIOS, see ticket #387 ... Wed, 14 Aug 2019 14:46:04 GMT josefine.ghattas [6163] Updated path to CO2 files now moved to folder SRF/CO2 on the shared ... Wed, 14 Aug 2019 14:39:39 GMT josefine.ghattas [6162] Small update: Use R_IN instead of R_BC to find forcing files. Wed, 14 Aug 2019 12:27:15 GMT josefine.ghattas [6161] As done in [6160]. Corrected errors on variables zcarblu and znetco2. ... Tue, 13 Aug 2019 14:49:03 GMT josefine.ghattas [6159] Added possibility to read and interpolate soilbulk and ph using XIOS ... Fri, 09 Aug 2019 12:25:27 GMT josefine.ghattas [6158] Update. Variables only changed places, not values. Thu, 08 Aug 2019 16:24:11 GMT josefine.ghattas [6157] Correction: variable ok_zimov was never initialized. Error introcuded in ... Wed, 07 Aug 2019 14:21:41 GMT fabienne.maignan [6155] R script to create coarse resolution CRUJRA files Wed, 07 Aug 2019 13:05:29 GMT josefine.ghattas [6154] Script to used to generation FLUXNET2015 forcing and observation files. ... Thu, 01 Aug 2019 12:41:40 GMT josefine.ghattas [6148] * trunk/TOOLS/GENERATE_VEGET_MAP/ESA-LUH2/process_landusemap_19PFT_quarterdeg_final_temp.jnl (added) Added script used for one step in creation of PFTmaps files used for ... Thu, 01 Aug 2019 10:43:34 GMT josefine.ghattas [6146] Add script for creating forcing file CRUJRA v2. Done by Vladislav ... Tue, 30 Jul 2019 15:25:57 GMT josefine.ghattas [6143] Corrected bug on siltfraction when reading soils_param.nc file with ... Thu, 25 Jul 2019 21:12:03 GMT jan.polcher [6136] Introduces the option to have a more continuous sub-3hourly rainfall ... Tue, 23 Jul 2019 23:13:59 GMT jan.polcher [6135] Adds the option for daily forcings (ISIMIP) to use relative humidity ... Wed, 03 Jul 2019 12:00:08 GMT josefine.ghattas [6094] * trunk/TOOLS/WOOD_HARVEST/README (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_extension.jnl (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_extension.ksh (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_final_perscenario_extension.ksh (added) Add scripts for woodharvest used for the extension of CMIP6 scenarios. ... Tue, 02 Jul 2019 17:40:56 GMT josefine.ghattas [6091] Updated last year to be used for v1.06 Fri, 28 Jun 2019 12:02:15 GMT josefine.ghattas [6081] * trunk/TOOLS/NUDGING_FILE/Job_moistc_runningmedian.sh (modified) Correct error for echo containing parantesis Fri, 28 Jun 2019 09:57:23 GMT josefine.ghattas [6079] * trunk/TOOLS/NUDGING_FILE/Job_moistc_yearly_files.sh (modified) Small change in output name Fri, 28 Jun 2019 09:42:05 GMT josefine.ghattas [6078] * trunk/TOOLS/NUDGING_FILE/Job_moistc_yearly_files.sh (modified) Corrected error in script. Thu, 27 Jun 2019 15:25:16 GMT josefine.ghattas [6074] Updated to create forcing files for the version v1.06 GSWP3. Add headers ... Thu, 27 Jun 2019 15:11:27 GMT josefine.ghattas [6073] * trunk/TOOLS/NUDGING_FILE/Job_moistc_yearly_files.sh (copied) * trunk/TOOLS/NUDGING_FILE/README (added) Added script to create soil moisture nudging files from daily output. Thu, 27 Jun 2019 14:33:04 GMT josefine.ghattas [6072] * trunk/TOOLS/NUDGING_FILE/Job_moistc_runningmedian.sh (copied) Add script to create soil moisture nudging files for running mean to be ... Tue, 25 Jun 2019 12:49:57 GMT josefine.ghattas [6058] - Changed comments - Replaced poros and SMCMAX by variables mcs. ... Wed, 19 Jun 2019 15:16:44 GMT josefine.ghattas [6041] Changed minimum accepted time step from "one_day/4.0" (6h) into ... Wed, 19 Jun 2019 15:12:02 GMT josefine.ghattas [6040] * Added printlev_loc * Added CALL sechiba_xios_initialize needed to use ... Wed, 19 Jun 2019 10:21:00 GMT josefine.ghattas [6034] Separated into new subroutine slowproc_veget_max_limit the code were ... Wed, 19 Jun 2019 09:40:30 GMT josefine.ghattas [6033] * Updated run.def as done in OOL_SEC_STO_FG2 (differences are LAI_MAP=n, ... Wed, 19 Jun 2019 07:20:02 GMT josefine.ghattas [6032] Variable delstock_routing changed name to delstock_routing_daily ... Wed, 19 Jun 2019 07:13:53 GMT josefine.ghattas [6031] Corrections to run with ok_stomate=False, see ticket #474 * ... Tue, 18 Jun 2019 08:02:12 GMT josefine.ghattas [6030] Corrected error with unit. There was *dt too much. See ticket #536 SL, ... Fri, 14 Jun 2019 14:47:23 GMT matthew.mcgrath [6025] Adding cautionary documentation for a parameter no longer influencing ... Fri, 14 Jun 2019 10:28:21 GMT josefine.ghattas [6024] * trunk/TOOLS/NUDGING_FILE (added) * trunk/TOOLS/NUDGING_FILE/Job_moistc_histr1.sh (added) Add script to create soil moisture nudging file to be used for LS3MIP ... Thu, 13 Jun 2019 15:58:26 GMT matthew.mcgrath [6023] Correcting a mistake I made in r6015 Thu, 13 Jun 2019 13:15:58 GMT josefine.ghattas [6022] Adpated since .config folder changed name into build Thu, 13 Jun 2019 13:14:03 GMT josefine.ghattas [6021] * Updated orchidee.default after corrections done in the comments in ... Thu, 13 Jun 2019 10:53:00 GMT josefine.ghattas [6018] Correction on qsurf, see ticket #480 and #467 . qsurf is output to LMDZ ... Tue, 11 Jun 2019 15:15:37 GMT matthew.mcgrath [6015] Ticket #473 - improving documentation related to new nitrogen routines ... Fri, 07 Jun 2019 15:07:41 GMT josefine.ghattas [6014] Modification on time dimensions + added path to mask. 4 mars 2019 A. ... Fri, 07 Jun 2019 13:19:39 GMT josefine.ghattas [6011] Change to use variable one_year instead of 365. Thu, 06 Jun 2019 14:58:09 GMT josefine.ghattas [6008] Use area instead of resolution. Mon, 03 Jun 2019 15:16:59 GMT josefine.ghattas [5989] Removed line introduced by misstake in rev [5987] Wed, 29 May 2019 15:16:05 GMT matthew.mcgrath [5987] Ticket #473: improving documentation related to nitrogen routines Wed, 22 May 2019 16:24:21 GMT josefine.ghattas [5973] Use area instead of resolution. See ticket #563 Mon, 20 May 2019 13:37:31 GMT josefine.ghattas [5969] C input through organic amendment is now taken into account . Ticket ... Fri, 10 May 2019 11:40:07 GMT josefine.ghattas [5957] Corrected bug with missing initialization for the case ... Mon, 29 Apr 2019 16:39:22 GMT josefine.ghattas [5942] As done in ORCHIDEE_2_2 [5941]: Correction in initialization for case ... Thu, 18 Apr 2019 12:33:40 GMT josefine.ghattas [5927] Revert changset [5922]: It is not possible to call getin by all ... Wed, 17 Apr 2019 16:49:24 GMT josefine.ghattas [5924] Added variable coszang in the interface intersurf_initialize_gathered as ... Wed, 17 Apr 2019 16:13:23 GMT josefine.ghattas [5922] * Use getin instead of getin_p to allow the case when the function ... Fri, 12 Apr 2019 09:39:15 GMT josefine.ghattas [5889] Small change on the interpolated output grid to have same longitudes as ... Tue, 09 Apr 2019 09:16:52 GMT josefine.ghattas [5878] Update experience with orchideedriver due to inclusion of CN in the ... Mon, 08 Apr 2019 09:50:22 GMT josefine.ghattas [5867] Correction to run with leap years when having the forcing file over ... Mon, 08 Apr 2019 09:14:45 GMT josefine.ghattas [5866] Added initialization of zlev and zlevuv, see ticket #126 FM Wed, 03 Apr 2019 09:41:00 GMT matthew.mcgrath [5862] Ticket #473: Initial attempt to improve documentation around added N ... Wed, 03 Apr 2019 09:29:36 GMT matthew.mcgrath [5861] OOL_SEC_STO jobs now require the soil_bulk_and_ph.nc...adding to SPINUP Tue, 02 Apr 2019 10:00:55 GMT josefine.ghattas [5858] Enhancement on the case OK_CARBON_SOIL_DISCRETIZATION=y, see also ticket ... Fri, 29 Mar 2019 09:08:34 GMT josefine.ghattas [5855] Change compression_level to 2. level 4 makes the time to acces files ... Thu, 28 Mar 2019 10:55:49 GMT josefine.ghattas [5854] Changed slightly output grid for interpolated output. This is done to ... Mon, 25 Mar 2019 12:55:29 GMT josefine.ghattas [5846] Corrected bug: this bug and alos the one corrected in [5843] are only ... Mon, 25 Mar 2019 10:11:25 GMT josefine.ghattas [5843] Corrected bug: stomate_rest_out.nc file was not closed correctly for ... Thu, 21 Mar 2019 12:55:16 GMT josefine.ghattas [5835] According to common agrement between icmc models: adapte so that the ... Thu, 21 Mar 2019 09:39:52 GMT josefine.ghattas [5834] Removed -qopenmp-threadprivate compat not longer needed at irene using ... Wed, 13 Mar 2019 10:26:57 GMT josefine.ghattas [5817] Deactivate stomate output if running without stomate was done both in ... Wed, 13 Mar 2019 09:46:46 GMT josefine.ghattas [5814] Corrections for unstructured grid, also done in ORCHIDEE_2_2 [5811]: * ... Wed, 13 Mar 2019 07:24:44 GMT josefine.ghattas [5807] Now also desactivate stomate_history_4dim.nc file if stomate is not ... Tue, 12 Mar 2019 15:05:36 GMT josefine.ghattas [5806] Correction to avoid problems with negative soil moisture. See ticket ... Fri, 08 Mar 2019 16:32:21 GMT josefine.ghattas [5792] In sechiba_main, declare temp_sol_new as intent(out). Fri, 08 Mar 2019 16:29:12 GMT josefine.ghattas [5791] Put back shum_ngrnd_perma in stomate_history.nc file Fri, 08 Mar 2019 15:23:39 GMT josefine.ghattas [5790] Moved 4D variables from stomate_history.nc into new file ... Fri, 08 Mar 2019 14:51:42 GMT josefine.ghattas [5789] Update with changes for Nitrogen maps. This was already done in FG2 and ... Fri, 08 Mar 2019 14:27:09 GMT josefine.ghattas [5786] Separated reading of soilph and soilbulk into new files. By default ...