# # ChangeLog for trunk # # Generated by Trac 1.0.1 # 2024-07-09T01:46:08+02:00 Fri, 02 May 2014 08:11:48 GMT josefine.ghattas [2093] Bug correction : Removed the term ( pb(ji)**kappa ) / cp_air from ... Fri, 11 Apr 2014 15:51:40 GMT nicolas.vuichard [2063] update Fri, 11 Apr 2014 13:32:55 GMT josefine.ghattas [2061] Changed to daily output frequency and less output level for ... Thu, 10 Apr 2014 12:25:36 GMT josefine.ghattas [2060] Extracted the part for the context orchidee from iodef.xml into a new ... Thu, 10 Apr 2014 09:21:41 GMT josefine.ghattas [2059] Corrected bug for running with XIOS introduced in rev 2031 : The ... Thu, 10 Apr 2014 07:43:40 GMT josefine.ghattas [2058] Corrected bug for OpenMP. Wed, 09 Apr 2014 10:43:15 GMT josefine.ghattas [2057] Added loop over aggreagate_p with reallocation and an increasing nbvmax ... Wed, 09 Apr 2014 10:33:23 GMT josefine.ghattas [2056] Update orchidee.default file for revision 2053 of ORCHIDEE/trunk. Wed, 09 Apr 2014 10:27:37 GMT josefine.ghattas [2055] Added xios_orchidee module in search for getin. Some change in comments. Wed, 09 Apr 2014 10:17:43 GMT josefine.ghattas [2054] Corrected defalut values in comments to have a correct generation of ... Wed, 09 Apr 2014 08:36:31 GMT josefine.ghattas [2053] Change name for variable maxmass_glacier into maxmass_snow. Also the ... Mon, 07 Apr 2014 16:43:22 GMT josefine.ghattas [2042] Truncate lines too long. Fri, 04 Apr 2014 16:19:41 GMT nicolas.vuichard [2031] merge the Photosynthesis branch primarily based on the work of Yin et al ... Fri, 04 Apr 2014 09:06:03 GMT nicolas.vuichard [2021] fix bug for reading observation file Tue, 01 Apr 2014 09:54:01 GMT josefine.ghattas [2008] Changed all remaining histwrite into histwrite_p. histwrite is possible ... Thu, 27 Mar 2014 15:54:33 GMT josefine.ghattas [2001] Externalize ngrnd parameter (number of soil levels in thermosoil) - Name ... Wed, 26 Mar 2014 09:51:37 GMT josefine.ghattas [1995] Changed to use min_stomate instead of zero for test on veget_max Mon, 24 Mar 2014 16:17:30 GMT fabienne.maignan [1987] CO2 downregulation is set to FALSE as a default value. Tue, 18 Mar 2014 15:22:34 GMT josefine.ghattas [1960] Correction in dependencise. This error was not causing any problem. Tue, 18 Mar 2014 15:00:53 GMT josefine.ghattas [1959] Corrected error introduced in rev [1957]. Tue, 18 Mar 2014 13:59:52 GMT josefine.ghattas [1958] Remove allocate, see ticket #127 Tue, 18 Mar 2014 13:13:33 GMT josefine.ghattas [1957] Ticket #74 Change in results excpected. Tue, 18 Mar 2014 13:04:22 GMT josefine.ghattas [1956] Changed name snowa_ini into snowa_aged. ticket #72 Tue, 18 Mar 2014 12:49:39 GMT josefine.ghattas [1955] Error in unit. Ticket #73 Mon, 17 Mar 2014 11:12:58 GMT josefine.ghattas [1954] Added "-openmp-threadprivate compat" at ada, needed for ORCHIDEE in some ... Fri, 07 Mar 2014 15:17:18 GMT nicolas.vuichard [1948] merge the features for writing nc files for orchidee and csv files for ... Thu, 06 Mar 2014 10:20:27 GMT josefine.ghattas [1947] - Created function thermosoil_levels : returns depth of nodes for the ... Tue, 04 Mar 2014 14:05:48 GMT josefine.ghattas [1943] Corrected soil moisture diagnostics. see ticket #103 Fri, 28 Feb 2014 15:52:50 GMT josefine.ghattas [1937] Adapted compile options at ADA for OpenMP and for using netcdf and hdf5 ... Thu, 27 Feb 2014 16:03:50 GMT josefine.ghattas [1935] Initialize XIOS correctly also for 360days calendar. Thu, 27 Feb 2014 12:18:50 GMT josefine.ghattas [1934] Added compile flag for compiling with OpenMP. Without this option, the ... Wed, 26 Feb 2014 16:00:38 GMT josefine.ghattas [1933] Extracted call of xios_orchidee_init from subroutine intsurf_history. ... Wed, 26 Feb 2014 15:17:41 GMT josefine.ghattas [1932] Corrected XIOS horizontal domain for using OpenMP. Removed some input ... Wed, 26 Feb 2014 13:12:56 GMT josefine.ghattas [1931] - xios_orchidee : using getin_p possible since restructuration in ... Thu, 20 Feb 2014 16:26:48 GMT josefine.ghattas [1925] - xios : adapted for use with OpenMP (only master thread do call to ... Wed, 19 Feb 2014 12:46:06 GMT josefine.ghattas [1920] - Created a new module mod_orchidee_para_var. This module contains ... Wed, 19 Feb 2014 07:44:00 GMT josefine.ghattas [1919] Finalize orchidee context correctly for the case of coupled run. Mon, 17 Feb 2014 09:25:30 GMT josefine.ghattas [1914] Correcte compile error in circular dependency Sun, 16 Feb 2014 07:48:59 GMT josefine.ghattas [1913] Missing protection for a XIOS type variable. Protection necessary to ... Fri, 14 Feb 2014 16:19:59 GMT josefine.ghattas [1911] Changed order so that the variables describing the size(iim, jjm) of lon ... Fri, 14 Feb 2014 16:15:36 GMT josefine.ghattas [1910] Protected send_fields for variables not always allocated. See commit on ... Fri, 14 Feb 2014 11:06:52 GMT josefine.ghattas [1907] Adpat for using XIOS output also in coupled mode with LMDZ. It is ... Tue, 11 Feb 2014 16:16:59 GMT josefine.ghattas [1892] Removed declaration of variable not longer used. Tue, 11 Feb 2014 14:33:56 GMT josefine.ghattas [1890] Suppressed calculation that was never done, see ticket #7 Tue, 11 Feb 2014 14:11:28 GMT josefine.ghattas [1889] Added INTENT(OUT) on lai variable. See ticket #71 Tue, 11 Feb 2014 13:53:12 GMT josefine.ghattas [1888] Clena, see ticket #52 Tue, 11 Feb 2014 13:34:33 GMT josefine.ghattas [1887] Correct comment, see ticket #49 Mon, 10 Feb 2014 17:18:58 GMT josefine.ghattas [1885] - Added argument "-parallel none" (or NONE or seq) for the case of ... Mon, 10 Feb 2014 16:05:48 GMT nicolas.vuichard [1884] calculations related to the maintenance respiration have been cleaned in ... Mon, 10 Feb 2014 10:37:28 GMT fabienne.maignan [1882] Modification of parameters for tropical forests and activation of CO2 ... Fri, 07 Feb 2014 16:34:33 GMT josefine.ghattas [1881] - Corrected bug in time step sent to XIOS (xios_update_calendar) - Now ... Tue, 04 Feb 2014 17:45:23 GMT josefine.ghattas [1877] Changed 0.0005555556 into 1/dt_sechiba in CALL xios_orchidee_send_field. ... Tue, 04 Feb 2014 09:25:49 GMT josefine.ghattas [1876] Added option --job 8 to compile XIOS in parallele. Tue, 04 Feb 2014 09:24:19 GMT josefine.ghattas [1875] At curie : Added libray stdc++ needed when linking to XIOS. Fri, 31 Jan 2014 15:13:48 GMT josefine.ghattas [1872] Update related to alma output using xios. Fri, 31 Jan 2014 09:14:15 GMT josefine.ghattas [1869] For cyclic spinup : Do not remove anymore the driver restart file when ... Thu, 30 Jan 2014 08:56:53 GMT josefine.ghattas [1865] For the case if using CyclicBegin and CyclicEnd in config.card : reset ... Wed, 29 Jan 2014 07:03:05 GMT josefine.ghattas [1857] Added stop in routing_waterbal for the cas of non conservation of water. ... Tue, 28 Jan 2014 15:23:45 GMT josefine.ghattas [1856] Error in dimension. Bug is not seen in standard configuration because ... Tue, 28 Jan 2014 13:47:05 GMT josefine.ghattas [1855] Clarified for dpu_max default value. Tue, 28 Jan 2014 10:48:44 GMT josefine.ghattas [1854] Cleaned stomate.card and run.def : the file stomate_forcing.nc is not ... Tue, 28 Jan 2014 10:33:56 GMT josefine.ghattas [1853] Clean evapot from diffuco_bare subroutine, see ticket #61 Tue, 28 Jan 2014 09:32:07 GMT josefine.ghattas [1852] Corrected bug on evap_bare_lim_ns. Some change in results. See ticket ... Tue, 28 Jan 2014 08:02:35 GMT josefine.ghattas [1851] Simplicfication : only compiling using fcm method with this makefile. Tue, 28 Jan 2014 07:51:13 GMT josefine.ghattas [1850] Read latitudes and longitudes also for VEGET_YEAR=0. See ticket #109 Fri, 24 Jan 2014 17:50:11 GMT josefine.ghattas [1846] Added protection around some xios_send_field Fri, 24 Jan 2014 17:43:15 GMT josefine.ghattas [1845] Small clean up Fri, 24 Jan 2014 14:34:05 GMT josefine.ghattas [1843] Reverting to previous revision. Thu, 23 Jan 2014 17:22:03 GMT josefine.ghattas [1840] Bug correction : variable was duplicated in the same output file Thu, 16 Jan 2014 10:20:20 GMT josefine.ghattas [1814] Corrected bug introduced in rev 1788. This bug gave segmentation error ... Mon, 13 Jan 2014 16:09:34 GMT josefine.ghattas [1808] Bug correction on one xios_send_field. Wed, 08 Jan 2014 09:44:53 GMT josefine.ghattas [1797] Separated iodef.xml into 3 files : iodef.xml : overall context, domain ... Mon, 06 Jan 2014 15:04:04 GMT josefine.ghattas [1792] Corrceted operation and unit on variable "emis" in output file created ... Mon, 06 Jan 2014 14:54:28 GMT josefine.ghattas [1791] Corrceted operation and unit on variable "emis" in sechiba_out_2.nc ... Mon, 06 Jan 2014 14:51:20 GMT josefine.ghattas [1790] Change in clean target : - Added clean target clean_fcm for use after ... Mon, 06 Jan 2014 14:10:57 GMT josefine.ghattas [1789] Corrected histwrite for ECanop in sechiba_out_2.nc file. Note that the ... Mon, 06 Jan 2014 10:41:37 GMT josefine.ghattas [1788] Added implemetation of interface to XIOS for writing of diagnostics. ... Tue, 17 Dec 2013 10:59:53 GMT josefine.ghattas [1773] - Added clean option - Now only copy intersurf.mod and libraries to ... Tue, 17 Dec 2013 10:51:47 GMT josefine.ghattas [1772] Corrected error in dss variable in sechiba_out_2 file. This was correcte ... Fri, 13 Dec 2013 10:28:57 GMT josefine.ghattas [1751] Corrected comment. B Guenet Tue, 10 Dec 2013 17:27:28 GMT nicolas.vuichard [1746] update of ENSEMBLE config for Fluxnet post-treatment Fri, 06 Dec 2013 13:23:09 GMT nicolas.vuichard [1726] update for using ce-ip format Thu, 05 Dec 2013 12:50:23 GMT nicolas.vuichard [1723] some corrections needed for running fluxnet config Thu, 05 Dec 2013 10:06:50 GMT nicolas.vuichard [1721] new routine for reading ERA-Interim forcing (ERA_Global) Fri, 29 Nov 2013 13:09:06 GMT josefine.ghattas [1693] Removed subroutine stop_mpi and finalize_para never used. + small clean Fri, 29 Nov 2013 13:08:23 GMT josefine.ghattas [1692] Removed local variable iim and jjm in intersurf_gathered. These ... Wed, 20 Nov 2013 11:16:11 GMT josefine.ghattas [1652] Added compiling in paralllel mode with fcm using -j 8 in argument to ... Wed, 20 Nov 2013 10:52:12 GMT josefine.ghattas [1651] Changed default target to be : with_fcm. This target compiles orchidee ... Wed, 13 Nov 2013 15:02:26 GMT anne.cozic [1615] 1- For omp parallelisation double all omp_barrier 2- change comment from ... Mon, 14 Oct 2013 16:13:45 GMT josefine.ghattas [1537] Subroutine r22setvar_p, included in interface setvar_p, now always reads ... Mon, 14 Oct 2013 08:18:24 GMT josefine.ghattas [1534] updated forcing file due to bug corrections. Thu, 10 Oct 2013 10:10:44 GMT josefine.ghattas [1524] stomate_forcing.nc is no longer produced by default. Activate in run.def ... Tue, 08 Oct 2013 16:29:12 GMT josefine.ghattas [1518] Added compil option for obelix. Tue, 08 Oct 2013 13:42:01 GMT josefine.ghattas [1516] Removed special caracters not allowded in the JobName. Tue, 08 Oct 2013 07:26:31 GMT josefine.ghattas [1513] - Added FCM version PATCHED/V1.2 in directory tools. - Modified ... Thu, 03 Oct 2013 14:58:05 GMT josefine.ghattas [1505] Added new options for makeorchidee_fcm : -full : full ... Wed, 02 Oct 2013 08:19:06 GMT josefine.ghattas [1494] Correction for commit rev 1486 : Add option in subroutine r22setvar_p to ... Mon, 30 Sep 2013 13:00:46 GMT josefine.ghattas [1486] Following variables are now always read from restart file : - ... Thu, 26 Sep 2013 14:11:05 GMT nicolas.vuichard [1483] Delete the FLUXNET directory Thu, 26 Sep 2013 14:00:07 GMT nicolas.vuichard [1482] add ORCHIDEE_3diff ferret script for Fluxnet