# # ChangeLog for / # # Generated by Trac 1.0.1 # 2024-12-28T18:05:01+01:00 Thu, 13 Jun 2024 15:03:12 GMT antoine.bierjon [8580] Integrated [8579] from branch ORCHIDEE_2_2 Adapted read and ... Thu, 13 Jun 2024 14:33:33 GMT antoine.bierjon [8579] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/slowproc.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_input_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) Adapted read and interpolation of irrigation input files with ... Thu, 13 Jun 2024 02:02:33 GMT lei.zhu [8578] 1.changed allometric for tree height(previously too high);2.fixed a bug ... Wed, 12 Jun 2024 11:05:47 GMT daniel.goll [8577] This commit contains to fixes to bugs introduced in earlier commits - ... Sun, 09 Jun 2024 09:56:00 GMT laura.sereni [8576] fixed bug after remove forcing Tue, 04 Jun 2024 15:28:05 GMT antoine.bierjon [8575] Scripts to generate input map files for new irrigation by Pedro F ... Fri, 31 May 2024 10:06:36 GMT daniel.goll [8574] the arch files were not sourced during compilation. This is now fixed. Wed, 29 May 2024 22:08:19 GMT sebastiaan.luyssaert [8573] Script to create restart files that are constrainted by observed tree ... Wed, 29 May 2024 18:24:39 GMT josefine.ghattas [8572] * branches/ORCHIDEE_2_2 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/intersurf.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG1trans/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG1transnd/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG2/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG2nd/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG3/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/OOL_SEC_STO_FG3nd/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/SPINUP_ANALYTIC_FG1/COMP/sechiba.driver (modified) * branches/ORCHIDEE_2_2/ORCHIDEE_OL/SPINUP_ANALYTIC_FG1nd/COMP/sechiba.driver (modified) Integrated from the trunk [8571]: xml and driver : add new output file ... Wed, 29 May 2024 17:06:34 GMT josefine.ghattas [8571] xml and driver : add new output file with mixed sechiba and stomate ... Mon, 27 May 2024 07:56:36 GMT josefine.ghattas [8570] Correction on [8565] needed for bark beetles. Sun, 26 May 2024 15:24:55 GMT laura.sereni [8569] interception_Storage in MB fixed Sat, 25 May 2024 07:42:45 GMT laura.sereni [8568] interception_Storage in MB fixed Fri, 24 May 2024 12:16:29 GMT josefine.ghattas [8567] * trunk (modified) Added freq_offset for variable once needed specially when using option ... Fri, 24 May 2024 12:13:17 GMT josefine.ghattas [8566] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) Added freq_offset for variable once needed specially when using option ... Thu, 23 May 2024 14:00:29 GMT sebastiaan.luyssaert [8565] Revised bark beetle submodel. Bark beetle pressure and associated ... Wed, 22 May 2024 08:12:31 GMT arthur.fendrich [8564] Lifting the last threshold Tue, 21 May 2024 11:08:23 GMT laura.sereni [8563] export data and litterHg soilHg linked fixed Tue, 21 May 2024 08:03:08 GMT josefine.ghattas [8562] * branches/ORCHIDEE_2_2/ORCHIDEE_OL/compile_orchidee_ol.sh (modified) Add compression by tar option now also in this branche, as done in the ... Tue, 21 May 2024 08:02:15 GMT josefine.ghattas [8561] Enhencement on compression option by tar. Now do not keep the modeles ... Mon, 20 May 2024 16:01:48 GMT laura.sereni [8560] export data fixed Mon, 20 May 2024 15:19:34 GMT laura.sereni [8559] export data fixed Thu, 16 May 2024 15:19:17 GMT minna.ma [8558] Update the code of ORCHIDEE3-NLAT Wed, 15 May 2024 09:56:34 GMT josefine.ghattas [8557] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/sechiba.f90 (modified) Added print for pixel and lat/lon as done in the trunk. This is usefull ... Tue, 14 May 2024 10:29:33 GMT josefine.ghattas [8556] Set back test_dynamic_max_height = .FALSE. as before [8552]. See ticket ... Mon, 13 May 2024 07:24:24 GMT laura.sereni [8555] partial soilHg MB close Mon, 13 May 2024 07:24:16 GMT laura.sereni [8554] partial soilHg MB close Wed, 08 May 2024 22:42:20 GMT sebastiaan.luyssaert [8553] Revert accidental commit in r6552 of file_def_orchidee.xml Wed, 08 May 2024 22:23:27 GMT sebastiaan.luyssaert [8552] Change default to make use of a precipitation dependent maximum tree ... Tue, 07 May 2024 13:29:22 GMT josefine.ghattas [8551] Add log files for branche 22 and 3 at jean-zay Tue, 07 May 2024 13:28:44 GMT josefine.ghattas [8550] Save log files from jean-zay Tue, 07 May 2024 08:36:27 GMT nelly.bergounhon [8549] Introducing spring frost on leaves of summergreen PFTs Mon, 06 May 2024 14:33:01 GMT josefine.ghattas [8548] * branches/ORCHIDEE_2_2/ORCHIDEE (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_highres.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_flow.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_simple.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_wrapper.f90 (modified) Integrated changes from [8536] done by Laurent Fairhead and Amaury ... Thu, 02 May 2024 15:13:49 GMT aya.bahi [8547] New: Cleaning up Thu, 02 May 2024 15:11:56 GMT josefine.ghattas [8546] * branches/ORCHIDEE_2_2/ORCHIDEE/src_parallel/xios_orchidee.f90 (modified) As in [8545]: makes it possible to output file forcing_by_ORCHIDEE.nc ... Thu, 02 May 2024 15:10:16 GMT josefine.ghattas [8545] Deactivate output for variable nav_lat and nav_lon for the case ... Thu, 02 May 2024 14:40:41 GMT josefine.ghattas [8544] Always copy files ORCHIDEE_interp_diag.nc and forcing_by_ORCHIDEE.nc if ... Thu, 02 May 2024 11:00:47 GMT josefine.ghattas [8543] * branches/ORCHIDEE_2_2/ORCHIDEE (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_stomate/stomate_lpj.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) Integrated changset [8542] : Removed output variable CONTFRAC_STOMATE ... Thu, 02 May 2024 10:56:53 GMT josefine.ghattas [8542] Removed output variable CONTFRAC_STOMATE which was redundant with ... Wed, 24 Apr 2024 20:22:26 GMT josefine.ghattas [8541] Removed correction which did not work done previously in [8536]. See ... Wed, 24 Apr 2024 16:46:43 GMT josefine.ghattas [8540] * branches/ORCHIDEE_2_2/ORCHIDEE (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_flow.f90 (modified) As in the trunk [8539] : Missing declaration in commit [8536]. Previous ... Wed, 24 Apr 2024 16:08:35 GMT josefine.ghattas [8539] Missing declaration in commit [8536]. Previous changeset didn't compile ... Wed, 24 Apr 2024 08:20:39 GMT josefine.ghattas [8538] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) As done in the trunk [8537]: Set forcing_by_ORCHIDEE.nc always to be ... Wed, 24 Apr 2024 08:18:49 GMT josefine.ghattas [8537] Set forcing_by_ORCHIDEE.nc always to be output on the native grid. This ... Wed, 24 Apr 2024 07:52:31 GMT josefine.ghattas [8536] Corrections needed for compilation with nvhpc and gfortran done by Kazem ... Mon, 22 Apr 2024 12:52:20 GMT josefine.ghattas [8535] Tweaking --job 4 to --job 2 in order not to fail in XIOS compilation, ... Tue, 16 Apr 2024 12:10:09 GMT josefine.ghattas [8534] Set compression in tar file of modeles/XIOS as default to gain in ... Mon, 15 Apr 2024 13:09:22 GMT xiaoni.wang [8533] Modifications applied to write areas in the history file. Mon, 15 Apr 2024 12:50:48 GMT josefine.ghattas [8532] Corrected bug affecting IOIPSL output. Index where missing. Error was ... Mon, 15 Apr 2024 09:23:37 GMT josefine.ghattas [8531] * branches/ORCHIDEE_2_2/ORCHIDEE/src_driver/forcing_tools.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/sechiba.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) Integrated [7912], [7925], [8179] and [8412] done on the trunk to output ... Fri, 12 Apr 2024 09:10:14 GMT arthur.fendrich [8530] Adding CAPE support to windthrow calculations Wed, 10 Apr 2024 09:21:42 GMT bertrand.guenet [8529] the f_0_diversity_default is read correctly Tue, 09 Apr 2024 13:11:55 GMT bertrand.guenet [8528] some corrections to read a f_0 diversity map Sun, 07 Apr 2024 14:05:00 GMT lei.zhu [8527] 1. Added PARAM folder;2.Added downregulation_co2 Sun, 07 Apr 2024 10:23:49 GMT laura.sereni [8526] advances in soilHg Thu, 04 Apr 2024 13:30:16 GMT bertrand.guenet [8525] The Khurana et al 2023 function has been added Thu, 04 Apr 2024 12:56:55 GMT bertrand.guenet [8524] Revert commit done by mistake on the trunk Thu, 04 Apr 2024 12:43:47 GMT bertrand.guenet [8523] The Khurana et al 2023 function has been added Thu, 04 Apr 2024 12:27:13 GMT bertrand.guenet [8522] Thu, 04 Apr 2024 12:25:42 GMT bertrand.guenet [8521] Tue, 02 Apr 2024 15:04:20 GMT josefine.ghattas [8520] Changed name on flag from TEST_DYNAMIC_HEIGHT into ... Tue, 02 Apr 2024 14:40:41 GMT josefine.ghattas [8519] Add aerodynamic resistance to the calculation of the GPP. See ticket ... Tue, 02 Apr 2024 08:25:39 GMT josefine.ghattas [8518] Added missing comma, thanks to Vlad ! The error was introduced last week ... Tue, 02 Apr 2024 07:54:54 GMT josefine.ghattas [8517] Corrected in src_parameters/pft_parameters.f90 by adding the line ... Tue, 02 Apr 2024 07:48:41 GMT josefine.ghattas [8516] - Corrected comments for default values in pft_parameters. - Updated ... Mon, 01 Apr 2024 09:56:12 GMT arthur.fendrich [8515] Fri, 29 Mar 2024 15:46:44 GMT bertrand.guenet [8514] simplification of the flag cascades when soil C insulation is activated Fri, 29 Mar 2024 15:11:27 GMT laura.sereni [8513] advances in soilHg Fri, 29 Mar 2024 11:18:36 GMT josefine.ghattas [8512] * In ORCHIDEE: changed default value for FR_CENTER_C=-1.0, as decided ... Fri, 29 Mar 2024 11:00:52 GMT josefine.ghattas [8511] Added propset for all configuration files, see comment on the wiki: ... Fri, 29 Mar 2024 09:43:28 GMT sebastiaan.luyssaert [8510] Improved parameter name to better reflect the function of the flag ... Thu, 28 Mar 2024 15:28:53 GMT josefine.ghattas [8509] Update default setup to follow trendy protocol from 2023. See ticket ... Thu, 28 Mar 2024 09:35:50 GMT xiaoni.wang [8508] Continue the merge of Mict-peat into a trunk version of ORC, and a ... Thu, 28 Mar 2024 09:12:10 GMT bertrand.guenet [8507] let the possibility to activate the soil C insulation effect without ... Wed, 27 Mar 2024 17:57:44 GMT xiaoni.wang [8506] Update the codes with the recent revision of trunk. Tested with the ... Wed, 27 Mar 2024 14:19:11 GMT xiaoni.wang [8505] Modification added to allow coupled simulation, after the previous ... Wed, 27 Mar 2024 12:02:01 GMT josefine.ghattas [8504] * branches/ORCHIDEE_2_2/ORCHIDEE (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_parallel/xios_orchidee.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_highres.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_flow.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_irrig.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_lake.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_native_para.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_simple.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_wrapper.f90 (modified) Integrated correction done in the trunk [8503] for compilation without ... Wed, 27 Mar 2024 11:45:28 GMT josefine.ghattas [8503] Compilation without XIOS was broken. Protected call to XIOS with cpp ... Wed, 27 Mar 2024 08:45:53 GMT josefine.ghattas [8502] Remove check for HF files which takes too much time Tue, 26 Mar 2024 15:39:07 GMT josefine.ghattas [8501] Enhancement on compilation script: add option to compress XIOS in tar ... Tue, 26 Mar 2024 13:25:27 GMT mojtaba.houballah [8500] Fixed some small bugs Tue, 26 Mar 2024 13:09:13 GMT mojtaba.houballah [8499] Fixed STICS allocation in stomate_growth_fun_all Tue, 26 Mar 2024 11:21:32 GMT josefine.ghattas [8498] Correction : this file was missing in the update of optimized parameters ... Mon, 25 Mar 2024 16:10:04 GMT josefine.ghattas [8497] Homogenization between driver files: Remove treatment of TIME_LENGTH ... Mon, 25 Mar 2024 14:53:59 GMT xiaoni.wang [8496] Applied modifications in ORCHIDEE in order to use the unstructured grids ... Mon, 25 Mar 2024 14:32:16 GMT xiaoni.wang [8495] Copied ORCHIDEE rev 8271. Mon, 25 Mar 2024 14:30:06 GMT xiaoni.wang [8494] Removing Mon, 25 Mar 2024 13:45:01 GMT xiaoni.wang [8493] recommit. Mon, 25 Mar 2024 13:03:43 GMT xiaoni.wang [8492] Recommit the modifications for the developments for using the ... Mon, 25 Mar 2024 11:46:22 GMT xiaoni.wang [8491] Modified several modules in order to use the unstructured DYNAMICO grids ... Mon, 25 Mar 2024 11:16:25 GMT josefine.ghattas [8490] Don't produce by default the output files ORCHIDEE_interp_diag. The ... Mon, 25 Mar 2024 09:46:48 GMT josefine.ghattas [8489] Integrated partially the commit [7394] done on ORCHIDEE_3 : Update N ... Fri, 22 Mar 2024 13:54:04 GMT xiaoni.wang [8488] Create a new branch for the driver development related to unstructured ... Tue, 19 Mar 2024 14:58:48 GMT aya.bahi [8487] New: add isotopes_f.f90 Tue, 19 Mar 2024 14:57:55 GMT aya.bahi [8486] New: delete old isotopes_sol_aya.f90 Tue, 19 Mar 2024 14:54:48 GMT aya.bahi [8485] New: change name of isotopes_sol_aya Tue, 19 Mar 2024 13:56:34 GMT josefine.ghattas [8484] Always copy hostfile Tue, 19 Mar 2024 13:56:05 GMT josefine.ghattas [8483] Always copy hostfile Tue, 19 Mar 2024 13:04:39 GMT josefine.ghattas [8482] Renamve files Tue, 19 Mar 2024 12:59:17 GMT josefine.ghattas [8481] Copied starting point for new trusting