# # ChangeLog for / # # Generated by Trac 1.0.1 # 2024-07-06T00:03:56+02:00 Thu, 29 Aug 2019 14:50:30 GMT josefine.ghattas [6184] Some cleaning Thu, 29 Aug 2019 14:48:35 GMT josefine.ghattas [6183] Update for ICOLMDZOR_v7 Thu, 29 Aug 2019 14:43:08 GMT josefine.ghattas [6182] Copied LMDZOR testing into new directory to be adapted for ICOLMDZOR ... Thu, 29 Aug 2019 14:34:43 GMT josefine.ghattas [6181] Update path and project name Thu, 29 Aug 2019 14:34:01 GMT josefine.ghattas [6180] Changed path Thu, 29 Aug 2019 09:59:21 GMT jina.jeong [6179] This is temporal. DIA_MAX for tropical trees decreased to avoid a ... Thu, 29 Aug 2019 09:04:51 GMT jina.jeong [6178] self thinning, add start_by_grad Thu, 29 Aug 2019 08:37:51 GMT jina.jeong [6177] New initialization method is added. It can be off by the flag ... Tue, 27 Aug 2019 14:52:54 GMT daniel.goll [6176] revised leaf nutrient (N,P) - Vcmax,Jmax relationship. new ... Fri, 23 Aug 2019 19:40:24 GMT sebastiaan.luyssaert [6175] DEV: fix for ticket #589. When checking the conservation of the surface ... Fri, 23 Aug 2019 14:40:39 GMT sebastiaan.luyssaert [6174] DEV: refining the solution for ticket #590 Fri, 23 Aug 2019 13:53:45 GMT anne-sofie.lanso [6173] ADD: The context_input_orchidee.xml was missing from the analytic spinup ... Fri, 23 Aug 2019 11:18:58 GMT sebastiaan.luyssaert [6172] DEV: addresses #590. There was no bug in the code. The condition to ... Wed, 21 Aug 2019 17:16:15 GMT sebastiaan.luyssaert [6171] DEV: fix #588 following this fix the model could run for 100 years over ... Sat, 17 Aug 2019 05:18:44 GMT sebastiaan.luyssaert [6170] DEV: fixes ticket #587 Fri, 16 Aug 2019 07:24:09 GMT josefine.ghattas [6169] small update Thu, 15 Aug 2019 13:50:50 GMT sebastiaan.luyssaert [6168] DEV: fixes ticket #545 through small changes in the atm_to_bm ... Thu, 15 Aug 2019 06:40:51 GMT sebastiaan.luyssaert [6167] DEV: hack_circ_class was removed from the code in r6166, now it is ... Thu, 15 Aug 2019 06:37:30 GMT sebastiaan.luyssaert [6166] DEV: code changes fix ticket #576 and include subsequent cleaning. ... Wed, 14 Aug 2019 17:16:20 GMT sebastiaan.luyssaert [6165] DEV: many little typographical fixes, replacing ipslerr by ipslerr_p and ... Wed, 14 Aug 2019 17:13:53 GMT sebastiaan.luyssaert [6164] DEV: fixes ticket #585 Wed, 14 Aug 2019 14:46:04 GMT josefine.ghattas [6163] Updated path to CO2 files now moved to folder SRF/CO2 on the shared ... Wed, 14 Aug 2019 14:39:39 GMT josefine.ghattas [6162] Small update: Use R_IN instead of R_BC to find forcing files. Wed, 14 Aug 2019 12:27:15 GMT josefine.ghattas [6161] As done in [6160]. Corrected errors on variables zcarblu and znetco2. ... Wed, 14 Aug 2019 10:38:08 GMT josefine.ghattas [6160] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/intersurf.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/sechiba.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_stomate/stomate.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_stomate/stomate_io.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) Corrected errors on variables zcarblu and znetco2. These variables are ... Tue, 13 Aug 2019 14:49:03 GMT josefine.ghattas [6159] Added possibility to read and interpolate soilbulk and ph using XIOS ... Fri, 09 Aug 2019 12:25:27 GMT josefine.ghattas [6158] Update. Variables only changed places, not values. Thu, 08 Aug 2019 16:24:11 GMT josefine.ghattas [6157] Correction: variable ok_zimov was never initialized. Error introcuded in ... Thu, 08 Aug 2019 10:28:40 GMT albert.jornet [6156] Clean: move stomate soil carbon discretized forcing file code from ... Wed, 07 Aug 2019 14:21:41 GMT fabienne.maignan [6155] R script to create coarse resolution CRUJRA files Wed, 07 Aug 2019 13:05:29 GMT josefine.ghattas [6154] Script to used to generation FLUXNET2015 forcing and observation files. ... Tue, 06 Aug 2019 11:49:53 GMT albert.jornet [6153] Clean: move stomate cforcing file source code from stomate.f90 into its ... Mon, 05 Aug 2019 13:53:39 GMT albert.jornet [6152] Fix: multiples fixes due to merge Mon, 05 Aug 2019 09:11:40 GMT fabienne.maignan [6151] * branches/ORCHIDEE_2_2/ORCHIDEE/src_parallel/xios_orchidee.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_stomate/stomate_lpj.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_stomate/stomate_npp.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/field_def_orchidee.xml (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/file_def_orchidee.xml (modified) Adding outputs for respiration of biomass compartments Fri, 02 Aug 2019 12:51:40 GMT albert.jornet [6150] Fix: properly set up types. Copy/paste can be dangerous. Thu, 01 Aug 2019 13:20:27 GMT albert.jornet [6149] Clean: move to stomate_forcing only used variables from stomate module Thu, 01 Aug 2019 12:41:40 GMT josefine.ghattas [6148] * trunk/TOOLS/GENERATE_VEGET_MAP/ESA-LUH2/process_landusemap_19PFT_quarterdeg_final_temp.jnl (added) Added script used for one step in creation of PFTmaps files used for ... Thu, 01 Aug 2019 12:23:24 GMT albert.jornet [6147] Clean: extract forcing.nc related source code to stomate_forcing.f90 Thu, 01 Aug 2019 10:43:34 GMT josefine.ghattas [6146] Add script for creating forcing file CRUJRA v2. Done by Vladislav ... Tue, 30 Jul 2019 15:35:35 GMT josefine.ghattas [6145] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/slowproc.f90 (modified) Correction related to VEGET_UPDATE and small fractions as done in the ... Tue, 30 Jul 2019 15:29:11 GMT josefine.ghattas [6144] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/slowproc.f90 (modified) As done in the trunk rev [6143]: Corrected bug on siltfraction when ... Tue, 30 Jul 2019 15:25:57 GMT josefine.ghattas [6143] Corrected bug on siltfraction when reading soils_param.nc file with ... Tue, 30 Jul 2019 08:13:58 GMT jina.jeong [6142] DEV: tested for one pixel for 150 years. Changes in growth_fun_all: The ... Mon, 29 Jul 2019 15:36:59 GMT albert.jornet [6141] Clean: add all used variable as arguments instead of relying in the ... Mon, 29 Jul 2019 15:29:56 GMT albert.jornet [6140] New: introduce topmodel from MICT to the trunk. Done by Chunjing Mon, 29 Jul 2019 12:53:38 GMT albert.jornet [6139] Clean: move tsurf_year into the wet ch4 module. It is only used there. ... Mon, 29 Jul 2019 11:55:51 GMT albert.jornet [6138] New: introduce wet CH4 module done by Shushi Peng into the trunk Mon, 29 Jul 2019 07:26:04 GMT albert.jornet [6137] Clean: upgrade to its own subroutine when transfering variables from the ... Thu, 25 Jul 2019 21:12:03 GMT jan.polcher [6136] Introduces the option to have a more continuous sub-3hourly rainfall ... Tue, 23 Jul 2019 23:13:59 GMT jan.polcher [6135] Adds the option for daily forcings (ISIMIP) to use relative humidity ... Tue, 23 Jul 2019 12:45:05 GMT albert.jornet [6134] Clean remove dev code Tue, 23 Jul 2019 09:22:46 GMT albert.jornet [6133] Clean: upgrade to its own subroutine when transfering variables from the ... Mon, 22 Jul 2019 13:37:19 GMT haicheng.zhang [6132] * branches/publications/ORCHIDEE-MUSLE (deleted) delete a wrong version Mon, 22 Jul 2019 13:34:49 GMT haicheng.zhang [6131] * branches/publications/ORCHIDEE-MUSLE-r6129 (copied) Copy ORCHIDEE-MUSLE_r6129 for publication Mon, 22 Jul 2019 13:31:41 GMT haicheng.zhang [6130] * branches/publications/ORCHIDEE-MUSLE (copied) Erosion Mon, 22 Jul 2019 12:39:19 GMT haicheng.zhang [6129] New: sechiba.f90 Mon, 22 Jul 2019 11:30:39 GMT haicheng.zhang [6128] New: ORCHIDEE_MUSLE modified on 20190722 by Haicheng Zhang Mon, 22 Jul 2019 10:23:16 GMT haicheng.zhang [6127] Branch: Fri, 19 Jul 2019 13:36:32 GMT fabienne.maignan [6126] Personal branch for Haicheng Zhang Fri, 19 Jul 2019 13:04:42 GMT albert.jornet [6125] New: integer implementation for allreduce_sum Change: adapt code to new ... Thu, 18 Jul 2019 15:52:24 GMT albert.jornet [6124] Fix: properly calculate forcesoil time index. ticket:550 Fix: replace ... Thu, 18 Jul 2019 10:53:58 GMT albert.jornet [6123] New: allow compressed restart files. Use the flag ... Thu, 18 Jul 2019 10:48:53 GMT albert.jornet [6122] Clean: stomate_accu can be implemented by using '''element''' statement. ... Thu, 18 Jul 2019 09:28:20 GMT albert.jornet [6121] New: add stomate_accu_r4d implementation Thu, 18 Jul 2019 09:24:01 GMT albert.jornet [6120] Clean: adapt histwrite_p calls to 3 dimensions Thu, 18 Jul 2019 09:06:06 GMT albert.jornet [6119] Clean: simplify restput_p and restget_p calls with more than 3 ... Wed, 17 Jul 2019 14:17:25 GMT albert.jornet [6118] Clean: apply new restget/restput call to dim_2driver Change: allow ... Wed, 17 Jul 2019 14:07:15 GMT albert.jornet [6117] New: IOIPSL historywrite_r3d (build on top of historywrite_r2d) New: ... Wed, 17 Jul 2019 12:00:41 GMT albert.jornet [6116] New: add parallel allreduce_sum_r New: extend available dimensions for ... Wed, 17 Jul 2019 09:09:39 GMT albert.jornet [6115] New: add parallel allreduce_sum_r New: extend available dimensions for ... Tue, 16 Jul 2019 14:41:43 GMT albert.jornet [6114] Clean: merge orch_XXXXXX_unindexed_mpi_Xgen and orch_XXXXXX_mpi_Xgen ... Tue, 16 Jul 2019 14:36:09 GMT albert.jornet [6113] Branch: merge MICT into trunk Mon, 15 Jul 2019 12:11:19 GMT anne-sofie.lanso [6112] DEV: litter raking does now also include nitrogen. Tested for a single ... Fri, 12 Jul 2019 09:21:22 GMT albert.jornet [6111] Fix: deepC_a/s/p variables are also required to be reinitialized when ... Thu, 11 Jul 2019 14:33:33 GMT anne-sofie.lanso [6110] CORRECT the flag of litter raking to what is actually read be the model. Thu, 11 Jul 2019 13:50:39 GMT albert.jornet [6109] Fix+Merge: merge revision [3094/trunk/ORCHIDEE]. Related to ticket:107. ... Thu, 11 Jul 2019 10:41:08 GMT anne-sofie.lanso [6108] DEV: Transfer of code from obelix to IRENE for testing and further ... Tue, 09 Jul 2019 09:46:47 GMT albert.jornet [6107] Fix: wrong order of veget_max_cov variables from lcchange_main. Found by ... Mon, 08 Jul 2019 08:15:56 GMT albert.jornet [6106] Improvements: add parallel interpolation to reduce memory footprint ... Mon, 08 Jul 2019 06:58:04 GMT matthew.mcgrath [6105] DEV: Changing some of the MLEB flags to match those set by ... Sun, 07 Jul 2019 12:11:32 GMT sebastiaan.luyssaert [6104] DEV: respiration parameters tuned over Europe and eavluated over the ... Fri, 05 Jul 2019 13:36:20 GMT josefine.ghattas [6103] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_routing_orchidee.xml (added) * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/iodef.xml (modified) Ticket #581 : added files missing in previous commit [6102] Fri, 05 Jul 2019 12:52:05 GMT josefine.ghattas [6102] * branches/ORCHIDEE_2_2/ORCHIDEE/orchidee.default (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing.f90 (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_simple.f90 (added) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/routing_wrapper.f90 (added) * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/sechiba.f90 (modified) Added routing_simple module and routing_wrapper. No changes in defalut ... Fri, 05 Jul 2019 12:40:47 GMT sebastiaan.luyssaert [6101] DEV: parameters set over Europe and evaluated over the Americas. Mostly ... Fri, 05 Jul 2019 10:23:06 GMT sebastiaan.luyssaert [6100] DEV: added a parameter to tweak the temperature sensitivity of PFTs ... Thu, 04 Jul 2019 19:14:20 GMT anne-sofie.lanso [6099] Removed H_FIRST from the run.defs when using r6098 and onwards Thu, 04 Jul 2019 19:11:30 GMT anne-sofie.lanso [6098] DEV: H_FIRST is no longer needed in the code, and has thus been removed Thu, 04 Jul 2019 11:55:19 GMT matthew.mcgrath [6097] Using Nicolas's senesence path for grasslands, based on leaf age, as the ... Wed, 03 Jul 2019 16:14:13 GMT sebastiaan.luyssaert [6096] DEV: simplified the calculation of sugar_load. Should not affect the ... Wed, 03 Jul 2019 16:06:14 GMT sebastiaan.luyssaert [6095] DEV: tuned COEFF_MAINT_INIT for all changes to respiration leading to ... Wed, 03 Jul 2019 12:00:08 GMT josefine.ghattas [6094] * trunk/TOOLS/WOOD_HARVEST/README (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_extension.jnl (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_extension.ksh (added) * trunk/TOOLS/WOOD_HARVEST/genere_woodharvest_scenarios_final_perscenario_extension.ksh (added) Add scripts for woodharvest used for the extension of CMIP6 scenarios. ... Wed, 03 Jul 2019 09:02:52 GMT sebastiaan.luyssaert [6093] DEV: updated the documentation Wed, 03 Jul 2019 08:06:49 GMT albert.jornet [6092] Fix: apply patch from CN-CAN when gstot is zero Tue, 02 Jul 2019 17:40:56 GMT josefine.ghattas [6091] Updated last year to be used for v1.06 Tue, 02 Jul 2019 14:59:31 GMT albert.jornet [6090] Merge: missing revision [6086/perso/fabio.cresto-aleina/ORCHIDEE-CAN- ... Tue, 02 Jul 2019 14:25:57 GMT albert.jornet [6089] Merge: from revisions [6086:6088/perso/fabio.cresto-aleina/ORCHIDEE- ... Tue, 02 Jul 2019 13:12:58 GMT fabio.cresto-aleina [6088] bugs in slowproc removed Tue, 02 Jul 2019 09:51:17 GMT fabio.cresto-aleina [6087] bugs removed, lai declared in diffuco Tue, 02 Jul 2019 08:52:09 GMT fabio.cresto-aleina [6086] biomass eliminated from src_sechiba Mon, 01 Jul 2019 12:57:57 GMT sebastiaan.luyssaert [6085] DEV: