# # ChangeLog for / # # Generated by Trac 1.0.1 # 2024-10-07T05:01:40+02:00 Thu, 18 Apr 2019 14:07:27 GMT josefine.ghattas [5928] Removed circ_class_biomass and circ_class_n from albedo. It was never ... Thu, 18 Apr 2019 12:33:40 GMT josefine.ghattas [5927] Revert changset [5922]: It is not possible to call getin by all ... Thu, 18 Apr 2019 10:04:29 GMT josefine.ghattas [5926] Correct error in initialization of fm_change_force, ticket #525 Thu, 18 Apr 2019 06:03:51 GMT bertrand.guenet [5925] * branches/publications/ORCHIDEE-LEAK-r5919 (copied) Wed, 17 Apr 2019 16:49:24 GMT josefine.ghattas [5924] Added variable coszang in the interface intersurf_initialize_gathered as ... Wed, 17 Apr 2019 16:33:50 GMT josefine.ghattas [5923] Switch order of arguments for variables laieff_isotrop and ... Wed, 17 Apr 2019 16:13:23 GMT josefine.ghattas [5922] * Use getin instead of getin_p to allow the case when the function ... Wed, 17 Apr 2019 15:11:44 GMT josefine.ghattas [5921] Change name for subroutine albedo_two_stream into albedo_main. See ... Wed, 17 Apr 2019 15:05:03 GMT josefine.ghattas [5920] Change name for variable npts into kjpindex to be coherent with ... Wed, 17 Apr 2019 15:02:49 GMT ronny.lauerwald [5919] ORCHILEAK, version used for trends and biases in NEE and NBP in the ... Wed, 17 Apr 2019 14:44:35 GMT josefine.ghattas [5918] Reorganization: moved albedo related code from condveg to albedo module. ... Wed, 17 Apr 2019 13:53:07 GMT albert.jornet [5917] Fix: zz_deep and zz_coef_deep are now correctly defined in the ... Wed, 17 Apr 2019 13:46:00 GMT albert.jornet [5916] New: partial forcesoil adaptation (from Bertrand). Not -yet- working. Wed, 17 Apr 2019 13:42:45 GMT josefine.ghattas [5915] See ticket #507 Initialize printlev_loc in module stomate_laieff: This ... Wed, 17 Apr 2019 13:39:46 GMT josefine.ghattas [5914] Initialize printlev_loc properly Wed, 17 Apr 2019 13:36:52 GMT josefine.ghattas [5913] Activated diagnostic interp_diag_vegetrefrac and added axis nvmap. See ... Wed, 17 Apr 2019 12:30:10 GMT josefine.ghattas [5912] Remove redundant get_printlev and other corrections on printlev_loc. ... Wed, 17 Apr 2019 12:24:20 GMT josefine.ghattas [5911] Use getin instead of getin_p to allow the case when the function ... Tue, 16 Apr 2019 15:17:51 GMT sebastiaan.luyssaert [5910] DEV: addresses ticket #502 concerning the analytical spin-up Tue, 16 Apr 2019 15:10:42 GMT sebastiaan.luyssaert [5909] DEV: reactivated printlev_loc Tue, 16 Apr 2019 14:33:38 GMT pascal.maugis [5908] generalization of variable follow-up and various upgrades Tue, 16 Apr 2019 12:01:52 GMT albert.jornet [5907] Merge: from revision [5771/perso/albert.jornet/ORCHIDEE- ... Tue, 16 Apr 2019 11:32:17 GMT guillaume.marie [5906] Bugfix Tue, 16 Apr 2019 09:45:04 GMT guillaume.marie [5905] bug fix in model_settings.py Tue, 16 Apr 2019 09:37:30 GMT anne-sofie.lanso [5904] Update PSI_LEAF for Fagus Sylvatica and Quercus Robur Petraea to induce ... Tue, 16 Apr 2019 09:29:28 GMT guillaume.marie [5903] Update SENESCENCE_TEMP_C and GDDNCD_OFFSET to better match phenelogy for ... Mon, 15 Apr 2019 19:52:30 GMT sebastiaan.luyssaert [5902] DEV: tested for a single pixel with PFT map for 10 years. See ticket ... Mon, 15 Apr 2019 12:58:32 GMT josefine.ghattas [5901] albedo_snow and albedo_glob are now local variables instead of module ... Mon, 15 Apr 2019 12:48:05 GMT josefine.ghattas [5900] Changed name for local variable veget_cov_max into veget_max to ... Mon, 15 Apr 2019 12:33:19 GMT josefine.ghattas [5899] Change variable name nlevels_photo into nlai, ticket #509 Mon, 15 Apr 2019 12:28:15 GMT josefine.ghattas [5898] Set back to run XIOS in attached mode when having only 1MPI for ... Mon, 15 Apr 2019 10:59:31 GMT josefine.ghattas [5897] Change variable name in restart file to be consistent with variable name ... Mon, 15 Apr 2019 10:52:08 GMT josefine.ghattas [5896] Change name of variables containing humrel into moiavail. Remove ... Mon, 15 Apr 2019 10:21:10 GMT guillaume.marie [5895] Mistake correction: I reactivated xios in OOL_SEC_STO_FG2 Mon, 15 Apr 2019 08:26:05 GMT josefine.ghattas [5894] Corrected to loop over nlevel_tot because the loop needs to account for ... Fri, 12 Apr 2019 13:07:21 GMT albert.jornet [5893] Fix: initialize pcappa_supp to zero to prevent any error Fri, 12 Apr 2019 11:24:52 GMT albert.jornet [5892] Fix: veget_max_bg is now initialized in sechiba Change: use ... Fri, 12 Apr 2019 09:40:49 GMT josefine.ghattas [5891] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_orchidee.xml (modified) As done in the trunk rev [5889]: Small change on the interpolated output ... Fri, 12 Apr 2019 09:40:14 GMT albert.jornet [5890] Merge: from [5888/perso/albert.jornet/MICT_PFUNIT] Fri, 12 Apr 2019 09:39:15 GMT josefine.ghattas [5889] Small change on the interpolated output grid to have same longitudes as ... Fri, 12 Apr 2019 09:24:48 GMT albert.jornet [5888] Change: implement tests using the pFUnit library Change: ... Fri, 12 Apr 2019 08:12:15 GMT albert.jornet [5887] New: branch to integrate pFUnit Fri, 12 Apr 2019 08:11:13 GMT albert.jornet [5886] del: remove obsolete branch Thu, 11 Apr 2019 13:07:23 GMT matthew.mcgrath [5885] DEV: Update the script to check which Python version is running. Script ... Thu, 11 Apr 2019 12:40:35 GMT guillaume.marie [5884] bug fix. script improvement Wed, 10 Apr 2019 12:19:21 GMT guillaume.marie [5883] bug fix Wed, 10 Apr 2019 10:23:11 GMT guillaume.marie [5882] add a new feature in the ensemble run to handle the comparaison between ... Wed, 10 Apr 2019 10:22:30 GMT guillaume.marie [5881] add a new feature in the ensemble run to handle the comparaison between ... Tue, 09 Apr 2019 14:47:09 GMT albert.jornet [5880] Correction: related to commit [5879]: - no STRICT_CHECK is ... Tue, 09 Apr 2019 14:28:34 GMT albert.jornet [5879] Fix: prevent with an error message the use of a full gridcell with full ... Tue, 09 Apr 2019 09:16:52 GMT josefine.ghattas [5878] Update experience with orchideedriver due to inclusion of CN in the ... Mon, 08 Apr 2019 17:34:36 GMT josefine.ghattas [5877] Cut lines too long to compile with gfortran Mon, 08 Apr 2019 16:37:38 GMT josefine.ghattas [5876] Ticket #498 - Removed vir_humrel_growingseason - Changed name of ... Mon, 08 Apr 2019 16:07:33 GMT josefine.ghattas [5875] Removed variables never used and corrrected small error in comment. Mon, 08 Apr 2019 15:41:39 GMT josefine.ghattas [5874] Revert commit [5777] containg work around not needed anymore. See ticket ... Mon, 08 Apr 2019 15:24:47 GMT josefine.ghattas [5873] Updated with changes done in the trunk between revision 5858:5867 Mon, 08 Apr 2019 15:03:42 GMT guillaume.marie [5872] simplify the use of the Rscript for ENSEMBLE evaluation and add a new ... Mon, 08 Apr 2019 13:21:40 GMT josefine.ghattas [5871] Updated with changes done in the trunk between revision 5792:5858 . ... Mon, 08 Apr 2019 13:20:17 GMT josefine.ghattas [5870] Updated with changes done in the trunk between revision 5792:5858 . In ... Mon, 08 Apr 2019 13:13:30 GMT guillaume.marie [5869] update R script for evaluation : add figure for phenological state ... Mon, 08 Apr 2019 11:31:56 GMT albert.jornet [5868] Fix: deal with min_vegfrac values found in veget_max Fix: ensure almost ... Mon, 08 Apr 2019 09:50:22 GMT josefine.ghattas [5867] Correction to run with leap years when having the forcing file over ... Mon, 08 Apr 2019 09:14:45 GMT josefine.ghattas [5866] Added initialization of zlev and zlevuv, see ticket #126 FM Fri, 05 Apr 2019 11:56:29 GMT anne-sofie.lanso [5865] K_LATOSA_MIN and K_LATOSA_MAX were updated to obtian acceptable LAI ... Fri, 05 Apr 2019 09:28:53 GMT albert.jornet [5864] Change: Fabio's latest developments Wed, 03 Apr 2019 13:29:57 GMT jina.jeong [5863] Self-thinning parameters from European NFI data were updated. Wed, 03 Apr 2019 09:41:00 GMT matthew.mcgrath [5862] Ticket #473: Initial attempt to improve documentation around added N ... Wed, 03 Apr 2019 09:29:36 GMT matthew.mcgrath [5861] OOL_SEC_STO jobs now require the soil_bulk_and_ph.nc...adding to SPINUP Tue, 02 Apr 2019 15:02:15 GMT guillaume.marie [5860] update make_eval_figure.R to integrate all EU sites Tue, 02 Apr 2019 13:15:48 GMT guillaume.marie [5859] add a fluxnet.card with all the European fluxnet sites Tue, 02 Apr 2019 10:00:55 GMT josefine.ghattas [5858] Enhancement on the case OK_CARBON_SOIL_DISCRETIZATION=y, see also ticket ... Mon, 01 Apr 2019 13:06:22 GMT guillaume.marie [5857] improvement of the cdo and R scripts Mon, 01 Apr 2019 10:19:19 GMT guillaume.marie [5856] add 4 four fluxnet.card files. full_eval every pft/sp are represented in ... Fri, 29 Mar 2019 09:08:34 GMT josefine.ghattas [5855] Change compression_level to 2. level 4 makes the time to acces files ... Thu, 28 Mar 2019 10:55:49 GMT josefine.ghattas [5854] Changed slightly output grid for interpolated output. This is done to ... Thu, 28 Mar 2019 10:54:16 GMT josefine.ghattas [5853] * branches/ORCHIDEE_2_2/ORCHIDEE/src_xml/context_orchidee.xml (modified) Changed slightly output grid for interpolated output. This is done to ... Thu, 28 Mar 2019 08:47:10 GMT anne.cozic [5852] modify a test on ok_explicitsnow and snowdz to avoid a bug when we run ... Thu, 28 Mar 2019 08:21:37 GMT anne.cozic [5851] correct a bug in compilation introduced with the vegetation patch Wed, 27 Mar 2019 14:37:43 GMT albert.jornet [5850] Fix: replace hardcoded days of the year with the global time variable ... Wed, 27 Mar 2019 14:10:48 GMT albert.jornet [5849] Fix: stomate_Cforcing timestep index ( tiket:550 ): - ... Mon, 25 Mar 2019 14:19:44 GMT matthew.mcgrath [5848] DEV: Bug fix for running in parallel Mon, 25 Mar 2019 12:56:22 GMT josefine.ghattas [5847] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/ioipslctrl.f90 (modified) As done in the trunk rev [5846]: Corrected bug: this bug and alos the ... Mon, 25 Mar 2019 12:55:29 GMT josefine.ghattas [5846] Corrected bug: this bug and alos the one corrected in [5843] are only ... Mon, 25 Mar 2019 11:19:19 GMT sebastiaan.luyssaert [5845] DEV: acounts for the correction proposed in r5843 for the trunk Mon, 25 Mar 2019 10:12:43 GMT josefine.ghattas [5844] * branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/ioipslctrl.f90 (modified) Corrected bug as done in the trunk rev [5843]: stomate_rest_out.nc file ... Mon, 25 Mar 2019 10:11:25 GMT josefine.ghattas [5843] Corrected bug: stomate_rest_out.nc file was not closed correctly for ... Mon, 25 Mar 2019 08:20:14 GMT albert.jornet [5842] Change: enable TOTAL_M xios variable from the source code Sun, 24 Mar 2019 16:23:37 GMT sebastiaan.luyssaert [5841] DEV: tested on a single pixel for 5 years. This code has two options to ... Fri, 22 Mar 2019 18:59:47 GMT sebastiaan.luyssaert [5840] DEV: tested for 2 years. Results are identical. stomate_resp is now in ... Thu, 21 Mar 2019 15:33:10 GMT guillaume.marie [5839] add R script to produce evaluation figures from ENSEMBLE runs based on ... Thu, 21 Mar 2019 14:08:41 GMT matthew.mcgrath [5838] DEV: Solving conflict if age classes are not specifically mentioned in ... Thu, 21 Mar 2019 13:41:36 GMT guillaume.marie [5837] add AGE_STAND in iopsl history file Thu, 21 Mar 2019 13:04:31 GMT josefine.ghattas [5836] * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_ADA.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_IRENE.fcm (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_IRENE.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-X64_OCCIGEN.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-gfortran.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-ifort_CICLAD.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/arch/arch-ifort_LSCE.path (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/bld.cfg (modified) * branches/ORCHIDEE_2_2/ORCHIDEE/makeorchidee_fcm (modified) Integrated changeset [5834] (remove -qopenmp-threadprivate compat) and ... Thu, 21 Mar 2019 12:55:16 GMT josefine.ghattas [5835] According to common agrement between icmc models: adapte so that the ... Thu, 21 Mar 2019 09:39:52 GMT josefine.ghattas [5834] Removed -qopenmp-threadprivate compat not longer needed at irene using ... Thu, 21 Mar 2019 07:57:56 GMT anne-sofie.lanso [5833] Added a few comments for clarification regarding the output of the ... Wed, 20 Mar 2019 09:53:20 GMT sebastiaan.luyssaert [5832] PROD: run.def for 13 PFTs is working Wed, 20 Mar 2019 09:09:06 GMT sebastiaan.luyssaert [5831] Fixed a couple of typos Wed, 20 Mar 2019 07:57:37 GMT sebastiaan.luyssaert [5830] Corrections for improved backward compatibility Tue, 19 Mar 2019 20:13:13 GMT sebastiaan.luyssaert [5829] Added instructions to the readme.txt file