| 1 | ! ================================================================================================================================= |
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| 2 | ! MODULE : stomate |
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| 3 | ! |
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| 4 | ! CONTACT : orchidee-help _at_ listes.ipsl.fr |
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| 5 | ! |
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| 6 | ! LICENCE : IPSL (2006) |
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| 7 | ! This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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| 8 | ! |
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| 9 | !>\BRIEF Groups the subroutines that: (1) initialize all variables in |
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| 10 | !! stomate, (2) read and write forcing files of stomate and the soil component, |
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| 11 | !! (3) aggregates and convert variables to handle the different time steps |
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| 12 | !! between sechiba and stomate, (4) call subroutines that govern major stomate |
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| 13 | !! processes (litter,\ soil, and vegetation dynamics) and (5) structures these tasks |
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| 14 | !! in stomate_main |
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| 15 | !! |
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| 16 | !!\n DESCRIPTION : None |
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| 17 | !! |
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| 18 | !! RECENT CHANGE(S) : None |
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| 19 | !! |
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| 20 | !! REFERENCE(S) : None |
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| 21 | !! |
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| 22 | !! SVN : |
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| 23 | !! $HeadURL$ |
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| 24 | !! $Date$ |
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| 25 | !! $Revision$ |
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| 26 | !! \n |
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| 27 | !_ ================================================================================================================================ |
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| 28 | |
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| 29 | MODULE stomate |
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| 30 | |
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| 31 | ! Modules used: |
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| 32 | USE netcdf |
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| 33 | USE defprec |
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| 34 | USE grid |
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| 35 | USE time, ONLY : one_day, one_year, dt_sechiba, & |
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| 36 | dt_stomate, LastTsYear, LastTsMonth |
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| 37 | USE time, ONLY : year_end, month_end, day_end, sec_end |
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| 38 | USE constantes |
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| 39 | USE constantes_soil |
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| 40 | USE vertical_soil_var |
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| 41 | USE pft_parameters |
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| 42 | USE structures |
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| 43 | USE sapiens_agriculture,ONLY : sapiens_agriculture_initialize |
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| 44 | USE sapiens_forestry, ONLY : sapiens_forestry_read_fm, sapiens_forestry_read_litter, & |
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| 45 | sapiens_forestry_read_species_change, & |
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| 46 | sapiens_forestry_read_desired_fm, & |
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| 47 | sapiens_forestry_read_spinup_clearcut |
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| 48 | USE stomate_io |
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| 49 | USE stomate_data |
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| 50 | USE stomate_season |
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| 51 | USE stomate_lpj |
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| 52 | USE stomate_litter |
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| 53 | USE stomate_vmax |
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| 54 | USE stomate_som_dynamics |
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| 55 | USE stomate_resp |
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| 56 | USE mod_orchidee_para |
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| 57 | USE ioipsl_para |
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| 58 | USE xios_orchidee |
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| 59 | USE function_library, ONLY : cc_to_lai, & |
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| 60 | check_vegetation_area, check_mass_balance, & |
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| 61 | check_pixel_area |
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| 62 | USE matrix_resolution |
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| 63 | USE utils |
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| 64 | USE stomate_soil_carbon_discretization |
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| 65 | USE stomate_io_soil_carbon_discretization |
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| 66 | USE stomate_laieff |
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| 67 | |
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| 68 | IMPLICIT NONE |
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| 69 | |
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| 70 | ! Private & public routines |
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| 71 | |
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| 72 | PRIVATE |
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| 73 | PUBLIC stomate_main,stomate_clear, stomate_initialize, stomate_finalize |
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| 74 | |
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| 75 | INTERFACE stomate_accu |
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| 76 | MODULE PROCEDURE stomate_accu_r1d, stomate_accu_r2d, stomate_accu_r3d, stomate_accu_r4d |
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| 77 | END INTERFACE |
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| 78 | |
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| 79 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: som_surf !! Carbon pool integrated to over surface soils: active, slow, or passive |
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| 80 | !$OMP THREADPRIVATE(som_surf) |
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| 81 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: age !! Age of PFT it normalized by biomass - can increase and |
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| 82 | !! decrease - (years) |
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| 83 | !$OMP THREADPRIVATE(age) |
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| 84 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: adapted !! Winter too cold for PFT to survive (0-1, unitless) |
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| 85 | !$OMP THREADPRIVATE(adapted) |
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| 86 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: regenerate !! Winter sufficiently cold to produce viable seeds |
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| 87 | !! (0-1, unitless) |
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| 88 | !$OMP THREADPRIVATE(regenerate) |
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| 89 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: everywhere !! Is the PFT everywhere in the grid box or very localized |
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| 90 | !! (after its intoduction) |
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| 91 | !$OMP THREADPRIVATE(everywhere) |
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| 92 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fireindex !! Probability of fire (unitless) |
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| 93 | !$OMP THREADPRIVATE(fireindex) |
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| 94 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: veget_lastlight !! Vegetation fractions (on ground) after last light |
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| 95 | !! competition (unitless) |
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| 96 | !$OMP THREADPRIVATE(veget_lastlight) |
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| 97 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: fpc_max !! "maximal" coverage fraction of a grid box (LAI -> |
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| 98 | !! infinity) on ground. [??CHECK??] It's set to zero here, |
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| 99 | !! and then is used once in lpj_light.f90 to test if |
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| 100 | !! fpc_nat is greater than it. Something seems missing |
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| 101 | !$OMP THREADPRIVATE(fpc_max) |
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| 102 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: PFTpresent !! PFT exists (equivalent to veget > 0 for natural PFTs) |
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| 103 | !$OMP THREADPRIVATE(PFTpresent) |
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| 104 | REAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: plant_status !! Growth and phenological status of the plant |
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| 105 | !! Different stati defined in constantes |
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| 106 | !$OMP THREADPRIVATE(plant_status) |
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| 107 | |
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| 108 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: need_adjacent !! This PFT needs to be in present in an adjacent gridbox |
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| 109 | !! if it is to be introduced in a new gridbox |
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| 110 | !$OMP THREADPRIVATE(need_adjacent) |
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| 111 | !-- |
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| 112 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vegstress_day !! Daily plant available water -root profile weighted |
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| 113 | !! (0-1, unitless) |
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| 114 | !$OMP THREADPRIVATE(vegstress_day) |
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| 115 | |
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| 116 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: stressed_daily !! Accumulated proxy for stressed ecosystem functioning |
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| 117 | !! see variable stressed defined in sechiba |
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| 118 | !$OMP THREADPRIVATE(stressed_daily) |
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| 119 | |
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| 120 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: unstressed_daily !! Accumulated proxy for unstressed ecosystem functioning |
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| 121 | !! see variable stressed defined in sechiba |
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| 122 | !$OMP THREADPRIVATE(unstressed_daily) |
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| 123 | |
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| 124 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: biomass_init_drought !! Biomass of heartwood or sapwood before onset of drought. |
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| 125 | !! Used to compute turnover on same reference biomass in |
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| 126 | !! stomate_turnover.f90. Should remain the same along one |
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| 127 | !! entire drought episode and be updated inbetween droughts. |
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| 128 | !$OMP THREADPRIVATE(biomass_init_drought) |
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| 129 | |
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| 130 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: kill_vessels !! Flag to kill vessels at the end of the day when there is embolism. |
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| 131 | !$OMP THREADPRIVATE(kill_vessels) |
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| 132 | |
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| 133 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vessel_loss_previous !! Proportion of conductivity lost due to cavitation, accumulated |
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| 134 | !! on the previous day (no unit). Used to compute vl_diff_daily. |
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| 135 | !$OMP THREADPRIVATE(vessel_loss_previous) |
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| 136 | |
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| 137 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vessel_loss_daily !! Proportion of conductivity lost due to cavitation in the xylem, |
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| 138 | !! accumulated per day (no unit). See variable vessel_loss defined |
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| 139 | !! in sechiba.f90. |
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| 140 | !$OMP THREADPRIVATE(vessel_loss_daily) |
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| 141 | |
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| 142 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: daylight !! Time steps dt_radia during daylight |
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| 143 | !$OMP THREADPRIVATE(daylight) |
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| 144 | |
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| 145 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: daylight_count !! Time steps dt_radia during daylight and when there is growth (gpp>0) |
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| 146 | !$OMP THREADPRIVATE(daylight_count) |
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| 147 | |
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| 148 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: transpir_supply_daily !! Daily supply of water for transpiration @tex $(mm dt^{-1})$ @endtex |
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| 149 | !$OMP THREADPRIVATE(transpir_supply_daily) |
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| 150 | |
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| 151 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vir_transpir_supply_daily !! Daily supply of water for transpiration |
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| 152 | !! @tex $(mm dt^{-1})$ @endtex |
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| 153 | !$OMP THREADPRIVATE(vir_transpir_supply_daily) |
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| 154 | |
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| 155 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: transpir_daily !! Daily demand of water for transpiration @tex $(mm dt^{-1})$ @endtex |
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| 156 | !$OMP THREADPRIVATE(transpir_daily) |
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| 157 | |
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| 158 | |
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| 159 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vegstress_week !! "Weekly" plant available water -root profile weighted |
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| 160 | !! (0-1, unitless) |
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| 161 | !$OMP THREADPRIVATE(vegstress_week) |
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| 162 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vegstress_month !! "Monthly" plant available water -root profile weighted |
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| 163 | !! (0-1, unitless) |
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| 164 | !$OMP THREADPRIVATE(vegstress_month) |
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| 165 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vegstress_season !! Mean growing season moisture availability (used for |
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| 166 | !! allocation response) |
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| 167 | !$OMP THREADPRIVATE(vegstress_season) |
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| 168 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxvegstress_lastyear !! Last year's max plant available water -root profile |
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| 169 | !! weighted (0-1, unitless) |
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| 170 | !$OMP THREADPRIVATE(maxvegstress_lastyear) |
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| 171 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxvegstress_thisyear !! This year's max plant available water -root profile |
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| 172 | !! weighted (0-1, unitless) |
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| 173 | !$OMP THREADPRIVATE(maxvegstress_thisyear) |
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| 174 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minvegstress_lastyear !! Last year's min plant available water -root profile |
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| 175 | !! weighted (0-1, unitless) |
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| 176 | !$OMP THREADPRIVATE(minvegstress_lastyear) |
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| 177 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minvegstress_thisyear !! This year's minimum plant available water -root profile |
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| 178 | !! weighted (0-1, unitless) |
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| 179 | !$OMP THREADPRIVATE(minvegstress_thisyear) |
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| 180 | !--- |
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| 181 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_daily !! Daily air temperature at 2 meter (K) |
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| 182 | !$OMP THREADPRIVATE(t2m_daily) |
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| 183 | |
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| 184 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason !! "seasonal" 2 meter temperatures (K) |
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| 185 | !$OMP THREADPRIVATE(Tseason) |
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| 186 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_length !! temporary variable to calculate Tseason |
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| 187 | !$OMP THREADPRIVATE(Tseason_length) |
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| 188 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_tmp !! temporary variable to calculate Tseason |
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| 189 | !$OMP THREADPRIVATE(Tseason_tmp) |
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| 190 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: Tmin_spring_time !! Number of days after begin_leaves (leaf onset) |
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| 191 | !$OMP THREADPRIVATE(Tmin_spring_time) |
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| 192 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_week !! Mean "weekly" (default 7 days) air temperature at 2 |
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| 193 | !! meter (K) |
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| 194 | !$OMP THREADPRIVATE(t2m_week) |
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| 195 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_month !! Mean "monthly" (default 20 days) air temperature at 2 |
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| 196 | !! meter (K) |
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| 197 | !$OMP THREADPRIVATE(t2m_month) |
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| 198 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_longterm !! Mean "Long term" (default 3 years) air temperature at |
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| 199 | !! 2 meter (K) |
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| 200 | !$OMP THREADPRIVATE(t2m_longterm) |
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| 201 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_min_daily !! Daily minimum air temperature at 2 meter (K) |
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| 202 | !$OMP THREADPRIVATE(t2m_min_daily) |
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| 203 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: tsurf_daily !! Daily surface temperatures (K) |
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| 204 | !$OMP THREADPRIVATE(tsurf_daily) |
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| 205 | |
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| 206 | !--- |
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| 207 | ! variables added for windthrow module --- |
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| 208 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: wind_speed_daily !! Daily maximum wind speed at 2 meter (ms-1) |
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| 209 | !$OMP THREADPRIVATE(wind_speed_daily) |
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| 210 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: max_wind_speed_storm !! Daily maximum wind speed at 2 meter (ms-1) |
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| 211 | !$OMP THREADPRIVATE(max_wind_speed_storm) |
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| 212 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: count_storm !! Daily maximum wind speed at 2 meter (ms-1) |
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| 213 | !$OMP THREADPRIVATE(count_storm) |
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| 214 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:) :: is_storm !! Daily maximum wind speed at 2 meter (ms-1) |
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| 215 | !$OMP THREADPRIVATE(is_storm) |
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| 216 | |
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| 217 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: wind_max_daily !! Temporary daily maximum speed used to calculate wind_speed_daily (ms-1) |
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| 218 | !$OMP THREADPRIVATE(wind_max_daily) |
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| 219 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: soil_temp_daily !! Daily maximum soil temperature at 0.8 meter below ground(K) |
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| 220 | !$OMP THREADPRIVATE(soil_temp_daily) |
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| 221 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: soil_max_daily !! Temporary daily maximum soil temperature used to calculate soil_temp_speed_daily (ms-1) |
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| 222 | !$OMP THREADPRIVATE(soil_max_daily) |
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| 223 | !--- |
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| 224 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_daily !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex |
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| 225 | !$OMP THREADPRIVATE(precip_daily) |
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| 226 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_lastyear !! Last year's annual precipitation sum |
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| 227 | !! @tex $??(mm year^{-1})$ @endtex |
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| 228 | !$OMP THREADPRIVATE(precip_lastyear) |
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| 229 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_thisyear !! This year's annual precipitation sum |
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| 230 | !! @tex $??(mm year^{-1})$ @endtex |
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| 231 | !$OMP THREADPRIVATE(precip_thisyear) |
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| 232 | !--- |
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| 233 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_daily !! Daily soil temperatures (K) |
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| 234 | !$OMP THREADPRIVATE(tsoil_daily) |
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| 235 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_month !! Soil temperatures at each soil layer integrated over a |
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| 236 | !! month (K) |
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| 237 | !$OMP THREADPRIVATE(tsoil_month) |
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| 238 | !--- |
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| 239 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: litterhum_daily !! Daily litter humidity (0-1, unitless) |
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| 240 | !$OMP THREADPRIVATE(litterhum_daily) |
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| 241 | !--- |
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| 242 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_moist !! Moisture control of heterotrophic respiration |
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| 243 | !! (0-1, unitless) |
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| 244 | !$OMP THREADPRIVATE(control_moist) |
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| 245 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: drainage !! Fraction of water lost from the soil column by leaching (-) |
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| 246 | !$OMP THREADPRIVATE(drainage) |
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| 247 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: drainage_daily !! Daily Fraction of water lost from the soil column by leaching (-) |
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| 248 | !$OMP THREADPRIVATE(drainage_daily) |
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| 249 | REAL(r_std),ALLOCATABLE,SAVE, DIMENSION(:,:) :: n_mineralisation_d !! net nitrogen mineralisation of decomposing SOM (gN/m**2/day), assumed to be NH4 |
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| 250 | !$OMP THREADPRIVATE(n_mineralisation_d) |
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| 251 | REAL(r_std),ALLOCATABLE,SAVE, DIMENSION(:,:,:) :: plant_n_uptake_daily !! Uptake of soil N by plants (gN/m**2/day) |
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| 252 | !$OMP THREADPRIVATE(plant_n_uptake_daily) |
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| 253 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: atm_to_bm_daily !! Nitrogen and carbon taken from the atmosphere to the ecosystem to support vegetation growth cumulated |
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| 254 | !$OMP THREADPRIVATE(atm_to_bm_daily) |
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| 255 | |
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| 256 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaching_daily !! Mineral nitrogen leached from the soil(g/m**2/day) |
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| 257 | !$OMP THREADPRIVATE(leaching_daily) |
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| 258 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: emission_daily !! Volatile losses of nitrogen (gN/m**2/day) |
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| 259 | !$OMP THREADPRIVATE(emission_daily) |
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| 260 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: n_input_daily !! Fertilizer, deposition and biological fixation of nitrogen (gN/m**2/day) |
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| 261 | !$OMP THREADPRIVATE(n_input_daily) |
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| 262 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_temp !! Temperature control of heterotrophic respiration at the |
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| 263 | !! different soil levels (0-1, unitless) |
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| 264 | !$OMP THREADPRIVATE(control_temp) |
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| 265 | !--- |
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| 266 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_init_date !! inital date for gdd count |
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| 267 | !$OMP THREADPRIVATE(gdd_init_date) |
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| 268 | |
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| 269 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_from_growthinit !! gdd from beginning of season (C) |
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| 270 | !$OMP THREADPRIVATE(gdd_from_growthinit) |
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| 271 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_lastyear !! Last year's annual Growing Degree Days, |
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| 272 | !! threshold 0 deg C (K) |
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| 273 | !$OMP THREADPRIVATE(gdd0_lastyear) |
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| 274 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_thisyear !! This year's annual Growing Degree Days, |
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| 275 | !! threshold 0 deg C (K) |
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| 276 | !$OMP THREADPRIVATE(gdd0_thisyear) |
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| 277 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_m5_dormance !! Growing degree days for onset of growing season, |
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| 278 | !! threshold -5 deg C (K) |
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| 279 | !$OMP THREADPRIVATE(gdd_m5_dormance) |
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| 280 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_midwinter !! Growing degree days for onset of growing season, |
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| 281 | !! since midwinter (K) |
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| 282 | !$OMP THREADPRIVATE(gdd_midwinter) |
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| 283 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ncd_dormance !! Number of chilling days since leaves were lost (days) |
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| 284 | !$OMP THREADPRIVATE(ncd_dormance) |
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| 285 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ngd_minus5 !! Number of growing days, threshold -5 deg C (days) |
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| 286 | !$OMP THREADPRIVATE(ngd_minus5) |
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| 287 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: hum_min_dormance !! Minimum moisture during dormance (0-1, unitless) |
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| 288 | !$OMP THREADPRIVATE(hum_min_dormance) |
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| 289 | !--- |
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| 290 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_daily !! Daily gross primary productivity per ground area |
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| 291 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 292 | !$OMP THREADPRIVATE(gpp_daily) |
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| 293 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_week !! Mean "weekly" (default 7 days) maintenance respiration |
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| 294 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 295 | !$OMP THREADPRIVATE(resp_maint_week) |
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| 296 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_week !! Mean "weekly" (default 7 days) GPP |
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| 297 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 298 | !$OMP THREADPRIVATE(gpp_week) |
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| 299 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_lastyear !! Last year's maximum "weekly" GPP |
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| 300 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 301 | !$OMP THREADPRIVATE(maxgppweek_lastyear) |
|---|
| 302 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_thisyear !! This year's maximum "weekly" GPP |
|---|
| 303 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 304 | !$OMP THREADPRIVATE(maxgppweek_thisyear) |
|---|
| 305 | !--- |
|---|
| 306 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_daily !! Daily net primary productivity per ground area |
|---|
| 307 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 308 | !$OMP THREADPRIVATE(npp_daily) |
|---|
| 309 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_longterm !! "Long term" (default 3 years) net primary productivity |
|---|
| 310 | !! per ground area |
|---|
| 311 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 312 | !$OMP THREADPRIVATE(npp_longterm) |
|---|
| 313 | !--- |
|---|
| 314 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: croot_longterm !! "Long term" (default 3 years) root carbon mass |
|---|
| 315 | !! per ground area |
|---|
| 316 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 317 | !$OMP THREADPRIVATE(croot_longterm) |
|---|
| 318 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: n_reserve_longterm !! "Long term" (default 3 years) actual to potential N |
|---|
| 319 | !! reserve pool (0-1, unitless) |
|---|
| 320 | !$OMP THREADPRIVATE(n_reserve_longterm) |
|---|
| 321 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part_radia!! Maintenance respiration of different plant parts per |
|---|
| 322 | !! total ground area at Sechiba time step |
|---|
| 323 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 324 | !$OMP THREADPRIVATE(resp_maint_part_radia) |
|---|
| 325 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part !! Maintenance respiration of different plant parts per |
|---|
| 326 | !! total ground area at Stomate time step |
|---|
| 327 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 328 | !$OMP THREADPRIVATE(resp_maint_part) |
|---|
| 329 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_d !! Maintenance respiration per ground area at Stomate time |
|---|
| 330 | !! step |
|---|
| 331 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 332 | !$OMP THREADPRIVATE(resp_maint_d) |
|---|
| 333 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_growth_d !! Growth respiration per ground area |
|---|
| 334 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 335 | !$OMP THREADPRIVATE(resp_growth_d) |
|---|
| 336 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_d !! Heterotrophic respiration per ground area |
|---|
| 337 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 338 | !$OMP THREADPRIVATE(resp_hetero_d) |
|---|
| 339 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_litter_d !! Heterotrophic respiration from litter per ground area |
|---|
| 340 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 341 | !$OMP THREADPRIVATE(resp_hetero_litter_d) |
|---|
| 342 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_soil_d !! Heterotrophic respiration from soil per ground area |
|---|
| 343 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 344 | !$OMP THREADPRIVATE(resp_hetero_soil_d) |
|---|
| 345 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_radia !! Heterothrophic respiration pe\r ground area at Sechiba |
|---|
| 346 | !! time step |
|---|
| 347 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 348 | !$OMP THREADPRIVATE(resp_hetero_radia) |
|---|
| 349 | !--- |
|---|
| 350 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: turnover_time !! Turnover time of grasses |
|---|
| 351 | !! @tex $(dt_stomate^{-1})$ @endtex |
|---|
| 352 | !$OMP THREADPRIVATE(turnover_time) |
|---|
| 353 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_daily !! Senescence-driven turnover (better: mortality) of |
|---|
| 354 | !! leaves and roots |
|---|
| 355 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 356 | !$OMP THREADPRIVATE(turnover_daily) |
|---|
| 357 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_resid !! The turnover left from turnover_daily at any given time step |
|---|
| 358 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 359 | !$OMP THREADPRIVATE(turnover_resid) |
|---|
| 360 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_littercalc !! Senescence-driven turnover (better: mortality) of |
|---|
| 361 | !! leaves and roots at Sechiba time step |
|---|
| 362 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 363 | !$OMP THREADPRIVATE(turnover_littercalc) |
|---|
| 364 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_longterm !! "Long term" (default 3 years) senescence-driven |
|---|
| 365 | !! turnover (better: mortality) of leaves and roots |
|---|
| 366 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 367 | !$OMP THREADPRIVATE(turnover_longterm) |
|---|
| 368 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_litter !! Background (not senescence-driven) mortality of biomass |
|---|
| 369 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 370 | !$OMP THREADPRIVATE(bm_to_litter) |
|---|
| 371 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_litter_resid !! Left over bm_to_litter at any specific time step |
|---|
| 372 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 373 | !$OMP THREADPRIVATE(bm_to_litter_resid) |
|---|
| 374 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: tree_bm_to_litter !! Background (not senescence-driven) mortality of biomass |
|---|
| 375 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 376 | !$OMP THREADPRIVATE(tree_bm_to_litter) |
|---|
| 377 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: tree_bm_to_litter_resid !! Left over tree_bm_to_litter at any specific time step |
|---|
| 378 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 379 | !$OMP THREADPRIVATE(tree_bm_to_litter_resid) |
|---|
| 380 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_littercalc !! conversion of biomass to litter per ground area at |
|---|
| 381 | !! Sechiba time step |
|---|
| 382 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 383 | !$OMP THREADPRIVATE(bm_to_littercalc) |
|---|
| 384 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: tree_bm_to_littercalc !! conversion of biomass to litter per ground area at |
|---|
| 385 | !! Sechiba time step |
|---|
| 386 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 387 | !$OMP THREADPRIVATE(tree_bm_to_littercalc) |
|---|
| 388 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: dead_leaves !! Metabolic and structural pools of dead leaves on ground |
|---|
| 389 | !! per PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 390 | !$OMP THREADPRIVATE(dead_leaves) |
|---|
| 391 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:):: litter !! Above and below ground metabolic and structural litter |
|---|
| 392 | !! per ground area |
|---|
| 393 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 394 | !$OMP THREADPRIVATE(litter) |
|---|
| 395 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: firelitter !! Total litter above the ground that could potentially |
|---|
| 396 | !! burn @tex $(gC m^{-2})$ @endtex |
|---|
| 397 | !$OMP THREADPRIVATE(firelitter) |
|---|
| 398 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: carbon_input !! Quantity of carbon going into carbon pools from litter |
|---|
| 399 | !! decomposition per ground area at Sechiba time step |
|---|
| 400 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 401 | !$OMP THREADPRIVATE(carbon_input) |
|---|
| 402 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: nitrogen_input !! Quantity of nitrogen going into nitrogen pools from litter |
|---|
| 403 | !! decomposition per ground area at Sechiba time step |
|---|
| 404 | !! @tex $(gC m^{-2} dtradia^{-1})$ @endtex |
|---|
| 405 | !$OMP THREADPRIVATE(nitrogen_input) |
|---|
| 406 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: som_input_daily !! Daily quantity of carbon going into carbon pools from |
|---|
| 407 | !! litter decomposition per ground area |
|---|
| 408 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 409 | !$OMP THREADPRIVATE(som_input_daily) |
|---|
| 410 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: som !! Soil organic matter pools per ground area: active, slow, or |
|---|
| 411 | !! passive, @tex $(gC or N m^{-2})$ @endtex |
|---|
| 412 | !$OMP THREADPRIVATE(som) |
|---|
| 413 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: burried_litter !! Litter burried under non-biological land uses (gC or N m-2) |
|---|
| 414 | !$OMP THREADPRIVATE(burried_litter) |
|---|
| 415 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_fresh_ltr !! Fresh litter burried under non-biological land uses (gC or N m-2) |
|---|
| 416 | !$OMP THREADPRIVATE(burried_fresh_ltr) |
|---|
| 417 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_fresh_som !! Fresh som burried under non-biological land uses (gC or N m-2) |
|---|
| 418 | !$OMP THREADPRIVATE(burried_fresh_som) |
|---|
| 419 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: burried_bact !! Bacteria burried under non-biological land uses (gC m-2) |
|---|
| 420 | !$OMP THREADPRIVATE(burried_bact) |
|---|
| 421 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: burried_fungivores !! Fungivores burried under non-biological land uses (N m-2) |
|---|
| 422 | !$OMP THREADPRIVATE(burried_fungivores) |
|---|
| 423 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: burried_min_nitro !! Mineral nitrogen burried under non-biological land uses (gC or N m-2) |
|---|
| 424 | !$OMP THREADPRIVATE(burried_min_nitro) |
|---|
| 425 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_som !! Som burried under non-biological land uses (gC or N m-2) |
|---|
| 426 | !$OMP THREADPRIVATE(burried_som) |
|---|
| 427 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_deepSOM_a !! Som burried under non-biological land uses (gC or N m-3) |
|---|
| 428 | !$OMP THREADPRIVATE(burried_deepSOM_a) |
|---|
| 429 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_deepSOM_s !! Som burried under non-biological land uses (gC or N m-3) |
|---|
| 430 | !$OMP THREADPRIVATE(burried_deepSOM_s) |
|---|
| 431 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: burried_deepSOM_p !! Som burried under non-biological land uses (gC or N m-3) |
|---|
| 432 | !$OMP THREADPRIVATE(burried_deepSOM_p) |
|---|
| 433 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: lignin_struc !! Ratio Lignine/Carbon in structural litter for above and |
|---|
| 434 | !! below ground compartments (unitless) |
|---|
| 435 | !$OMP THREADPRIVATE(lignin_struc) |
|---|
| 436 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: lignin_wood !! Ratio Lignine/Carbon in woody litter for above and |
|---|
| 437 | !! below ground compartments (unitless) |
|---|
| 438 | !$OMP THREADPRIVATE(lignin_wood) |
|---|
| 439 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_lastyearmax !! Last year's maximum leaf mass per ground area for each |
|---|
| 440 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 441 | !$OMP THREADPRIVATE(lm_lastyearmax) |
|---|
| 442 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_thisyearmax !! This year's maximum leaf mass per ground area for each |
|---|
| 443 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 444 | !$OMP THREADPRIVATE(lm_thisyearmax) |
|---|
| 445 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_lastyear !! Last year's maximum fpc for each natural PFT, on ground |
|---|
| 446 | !! [??CHECK] fpc but this ones look ok (computed in |
|---|
| 447 | !! season, used in light)?? |
|---|
| 448 | !$OMP THREADPRIVATE(maxfpc_lastyear) |
|---|
| 449 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_thisyear !! This year's maximum fpc for each PFT, on ground (see |
|---|
| 450 | !! stomate_season), [??CHECK] fpc but this ones look ok |
|---|
| 451 | !! (computed in season, used in light)?? |
|---|
| 452 | !$OMP THREADPRIVATE(maxfpc_thisyear) |
|---|
| 453 | !--- |
|---|
| 454 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_age !! Age of different leaf classes (days) |
|---|
| 455 | !$OMP THREADPRIVATE(leaf_age) |
|---|
| 456 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_frac !! PFT fraction of leaf mass in leaf age class (0-1, |
|---|
| 457 | !! unitless) |
|---|
| 458 | !$OMP THREADPRIVATE(leaf_frac) |
|---|
| 459 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: when_growthinit !! Days since beginning of growing season (days) |
|---|
| 460 | !$OMP THREADPRIVATE(when_growthinit) |
|---|
| 461 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: herbivores !! Time constant of probability of a leaf to be eaten by a |
|---|
| 462 | !! herbivore (days) |
|---|
| 463 | !$OMP THREADPRIVATE(herbivores) |
|---|
| 464 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: RIP_time !! How much time ago was the PFT eliminated for the last |
|---|
| 465 | !! time (year) |
|---|
| 466 | !$OMP THREADPRIVATE(RIP_time) |
|---|
| 467 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: time_hum_min !! Time elapsed since strongest moisture limitation (days) |
|---|
| 468 | !$OMP THREADPRIVATE(time_hum_min) |
|---|
| 469 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: drain_daily !! daily fraction of water lost from the soil column by leaching (-) |
|---|
| 470 | !$OMP THREADPRIVATE(drain_daily) |
|---|
| 471 | |
|---|
| 472 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: cn_leaf_min_season !! Seasonal min CN ratio of leaves |
|---|
| 473 | !$OMP THREADPRIVATE(cn_leaf_min_season) |
|---|
| 474 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: nstress_season !! N-related seasonal stress (used for allocation) |
|---|
| 475 | !$OMP THREADPRIVATE(nstress_season) |
|---|
| 476 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: soil_n_min !! mineral nitrogen in the soil (gN/m**2) |
|---|
| 477 | !! (first index=kjpindex, second index=nvm, third index=nnspec) |
|---|
| 478 | !$OMP THREADPRIVATE(soil_n_min) |
|---|
| 479 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: p_O2 !! partial pressure of oxigen in the soil (hPa)(first index=kjpindex, second index=nvm) |
|---|
| 480 | !$OMP THREADPRIVATE(p_O2) |
|---|
| 481 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: bact !! denitrifier biomass (gC/m**2) |
|---|
| 482 | !! (first index=npts, second index=nvm) |
|---|
| 483 | !$OMP THREADPRIVATE(bact) |
|---|
| 484 | !--- |
|---|
| 485 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_fire !! Carbon emitted to the atmosphere by burning living |
|---|
| 486 | !! and dead biomass |
|---|
| 487 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 488 | !$OMP THREADPRIVATE(co2_fire) |
|---|
| 489 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_to_bm_dgvm !! Psuedo-photosynthesis,C used to provide seedlings with |
|---|
| 490 | !!$ !! an initial biomass, arbitrarily removed from the |
|---|
| 491 | !!$ !! atmosphere |
|---|
| 492 | !!$ !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 493 | !!$!$OMP THREADPRIVATE(co2_to_bm_dgvm) |
|---|
| 494 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: atm_to_bm !! C and N taken from the atmosphere to provide seedlings |
|---|
| 495 | !! with an initial N biomass |
|---|
| 496 | !! @tex $(gN m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 497 | !$OMP THREADPRIVATE(atm_to_bm) |
|---|
| 498 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: prod_s !! Wood products remaining in the 1 year-turnover pool |
|---|
| 499 | !$OMP THREADPRIVATE(prod_s) |
|---|
| 500 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: prod_m !! Wood products remaining in the 10 year-turnover pool |
|---|
| 501 | !! after the annual release for each compartment |
|---|
| 502 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 503 | !! (0:10 input from year of land cover change), |
|---|
| 504 | !! dimension(#pixels,0:10 years |
|---|
| 505 | !$OMP THREADPRIVATE(prod_m) |
|---|
| 506 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: prod_l !! Wood products remaining in the 100 year-turnover pool |
|---|
| 507 | !! after the annual release for each compartment |
|---|
| 508 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 509 | !! (0:100 input from year of land cover change), |
|---|
| 510 | !! dimension(#pixels,0:100 years) |
|---|
| 511 | !$OMP THREADPRIVATE(prod_l) |
|---|
| 512 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: flux_s !! Wood decomposition from the 1 year-turnover pool |
|---|
| 513 | !! compartments |
|---|
| 514 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 515 | !! dimension(#pixels,0:1) |
|---|
| 516 | !$OMP THREADPRIVATE(flux_s) |
|---|
| 517 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: flux_m !! Wood decomposition from the 10 year-turnover pool |
|---|
| 518 | !! compartments |
|---|
| 519 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 520 | !! dimension(#pixels,0:10) |
|---|
| 521 | !$OMP THREADPRIVATE(flux_m) |
|---|
| 522 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: flux_l !! Wood decomposition from the 100 year-turnover pool |
|---|
| 523 | !! compartments |
|---|
| 524 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 525 | !! dimension(#pixels,0:100) |
|---|
| 526 | !$OMP THREADPRIVATE(flux_l) |
|---|
| 527 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: flux_prod_s !! Release during first year following land cover change |
|---|
| 528 | !! (paper, burned, etc...) |
|---|
| 529 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 530 | !$OMP THREADPRIVATE(flux_prod_s) |
|---|
| 531 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: flux_prod_m !! Total annual release from the 10 year-turnover pool |
|---|
| 532 | !! sum of flux_m |
|---|
| 533 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 534 | !$OMP THREADPRIVATE(flux_prod_m) |
|---|
| 535 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: flux_prod_l !! Total annual release from the 100 year-turnover pool |
|---|
| 536 | !! sum of flux_l |
|---|
| 537 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 538 | !$OMP THREADPRIVATE(flux_prod_l) |
|---|
| 539 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_flux !! CO2 flux between atmosphere and biosphere |
|---|
| 540 | !! @tex $(gC m^{-2} one_day^{-1})$ @endtex |
|---|
| 541 | !$OMP THREADPRIVATE(co2_flux) |
|---|
| 542 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: fco2_lu !! CO2 flux between atmosphere and biosphere from land-use |
|---|
| 543 | !! (without forest management) |
|---|
| 544 | !! @tex $(gC m^{-2} one_day^{-1})$ @endtex |
|---|
| 545 | !$OMP THREADPRIVATE(fco2_lu) |
|---|
| 546 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: fco2_wh !! CO2 Flux to Atmosphere from Wood Harvesting (positive from atm to land) |
|---|
| 547 | !! @tex $(gC m^{-2} one_day^{-1})$ @endtex |
|---|
| 548 | !$OMP THREADPRIVATE(fco2_wh) |
|---|
| 549 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: fco2_ha !! CO2 Flux to Atmosphere from Crop Harvesting (positive from atm to land) |
|---|
| 550 | !! @tex $(gC m^{-2} one_day^{-1})$ @endtex |
|---|
| 551 | !$OMP THREADPRIVATE(fco2_ha) |
|---|
| 552 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fDeforestToProduct !! Deforested biomass into product pool due to anthropogenic |
|---|
| 553 | !! land use change |
|---|
| 554 | |
|---|
| 555 | !$OMP THREADPRIVATE(fDeforestToProduct) |
|---|
| 556 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fLulccResidue !! Carbon mass flux into soil and litter due to anthropogenic land use or land cover change |
|---|
| 557 | !$OMP THREADPRIVATE(fLulccResidue) |
|---|
| 558 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fHarvestToProduct !! Deforested biomass into product pool due to anthropogenic |
|---|
| 559 | !! land use |
|---|
| 560 | !$OMP THREADPRIVATE(fHarvestToProduct) |
|---|
| 561 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION (:,:):: woodharvestpft !! New year wood harvest per PFT |
|---|
| 562 | !$OMP THREADPRIVATE(woodharvestpft) |
|---|
| 563 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: carb_mass_total !! Total on-site and off-site C pool |
|---|
| 564 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 565 | !$OMP THREADPRIVATE(carb_mass_total) |
|---|
| 566 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: deepSOM_a !! deep active SOM profile (g/m**3) |
|---|
| 567 | !$OMP THREADPRIVATE(deepSOM_a) |
|---|
| 568 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: deepSOM_s !! deep slow SOM profile (g/m**3) |
|---|
| 569 | !$OMP THREADPRIVATE(deepSOM_s) |
|---|
| 570 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: deepSOM_p !! deep passive SOM profile (g/m**3) |
|---|
| 571 | !$OMP THREADPRIVATE(deepSOM_p) |
|---|
| 572 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: O2_soil !! deep oxygen |
|---|
| 573 | !$OMP THREADPRIVATE(O2_soil) |
|---|
| 574 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: CH4_soil !! deep methane |
|---|
| 575 | !$OMP THREADPRIVATE(CH4_soil) |
|---|
| 576 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: O2_snow !! snow oxygen |
|---|
| 577 | !$OMP THREADPRIVATE(O2_snow) |
|---|
| 578 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: CH4_snow !! snow methane |
|---|
| 579 | !$OMP THREADPRIVATE(CH4_snow) |
|---|
| 580 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: tdeep_daily !! daily t profile (K) |
|---|
| 581 | !$OMP THREADPRIVATE(tdeep_daily) |
|---|
| 582 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: hsdeep_daily !! daily humidity profile (unitless) |
|---|
| 583 | !$OMP THREADPRIVATE(hsdeep_daily) |
|---|
| 584 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: temp_sol_daily !! daily soil surface temp (K) |
|---|
| 585 | !$OMP THREADPRIVATE(temp_sol_daily) |
|---|
| 586 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: pb_pa_daily !! daily surface pressure [Pa] |
|---|
| 587 | !$OMP THREADPRIVATE(pb_pa_daily) |
|---|
| 588 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: snow_daily !! daily snow mass |
|---|
| 589 | !$OMP THREADPRIVATE(snow_daily) |
|---|
| 590 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: fbact !! turnover constant for soil carbon discretization (day) |
|---|
| 591 | !$OMP THREADPRIVATE(fbact) |
|---|
| 592 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: decomp_rate !! decomposition constant for soil carbon discretization (day-1) |
|---|
| 593 | !$OMP THREADPRIVATE(decomp_rate) |
|---|
| 594 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: decomp_rate_daily!! decomposition constant for soil carbon discretization (day) |
|---|
| 595 | !$OMP THREADPRIVATE(decomp_rate_daily) |
|---|
| 596 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: fixed_cryoturbation_depth !! depth to hold cryoturbation to for fixed runs |
|---|
| 597 | !$OMP THREADPRIVATE(fixed_cryoturbation_depth) |
|---|
| 598 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: snowdz_daily !! daily snow depth profile [m] |
|---|
| 599 | !$OMP THREADPRIVATE(snowdz_daily) |
|---|
| 600 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: snowrho_daily !! daily snow density profile (Kg/m^3) |
|---|
| 601 | !$OMP THREADPRIVATE(snowrho_daily) |
|---|
| 602 | |
|---|
| 603 | ! Below are the variables needed to be written to the soil carbon discretization spinup file |
|---|
| 604 | REAL(r_std),DIMENSION(:,:,:,:,:),ALLOCATABLE :: som_input_2pfcforcing !! quantity of carbon going into carbon pools from |
|---|
| 605 | !! litter decomposition per ground area |
|---|
| 606 | !! @tex $(gC m^{-2} day^{-1})$ @endtex for forcesoil |
|---|
| 607 | !$OMP THREADPRIVATE(som_input_2pfcforcing) |
|---|
| 608 | REAL(r_std),DIMENSION(:,:),ALLOCATABLE :: pb_2pfcforcing !! surface pressure [Pa] for forcesoil |
|---|
| 609 | !$OMP THREADPRIVATE(pb_2pfcforcing) |
|---|
| 610 | REAL(r_std),DIMENSION(:,:),ALLOCATABLE :: snow_2pfcforcing !! snow mass for forcesoil |
|---|
| 611 | !$OMP THREADPRIVATE(snow_2pfcforcing) |
|---|
| 612 | REAL(r_std),DIMENSION(:,:,:,:),ALLOCATABLE :: tprof_2pfcforcing !! Soil temperature (K) for forcesoil |
|---|
| 613 | !$OMP THREADPRIVATE(tprof_2pfcforcing) |
|---|
| 614 | REAL(r_std),DIMENSION(:,:,:,:),ALLOCATABLE :: fbact_2pfcforcing !! turnover constant for forcesoil (day) |
|---|
| 615 | !$OMP THREADPRIVATE(fbact_2pfcforcing) |
|---|
| 616 | REAL(r_std),DIMENSION(:,:,:,:),ALLOCATABLE :: hslong_2pfcforcing !! Soil humiditity (-) for forcesoil |
|---|
| 617 | !$OMP THREADPRIVATE(hslong_2pfcforcing) |
|---|
| 618 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE :: veget_max_2pfcforcing !! Vegetation coverage taking into account non-biological |
|---|
| 619 | !! coverage (unitless) for forcesoil |
|---|
| 620 | !$OMP THREADPRIVATE(veget_max_2pfcforcing) |
|---|
| 621 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE :: rprof_2pfcforcing !! Coefficient of the exponential functions that |
|---|
| 622 | !! relates root density to soil depth (unitless), for forcesoil |
|---|
| 623 | !$OMP THREADPRIVATE(rprof_2pfcforcing) |
|---|
| 624 | REAL(r_std),DIMENSION(:,:),ALLOCATABLE :: tsurf_2pfcforcing !! Surface temperatures (K), for forcesoil |
|---|
| 625 | !$OMP THREADPRIVATE(tsurf_2pfcforcing) |
|---|
| 626 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE :: snowdz_2pfcforcing !! Snow depth profile [m], for forcesoil |
|---|
| 627 | !$OMP THREADPRIVATE(snowdz_2pfcforcing) |
|---|
| 628 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE :: snowrho_2pfcforcing !! Snow density profile (Kg/m^3), for forcesoil |
|---|
| 629 | !$OMP THREADPRIVATE(snowrho_2pfcforcing) |
|---|
| 630 | REAL(r_std),DIMENSION(:,:,:,:),ALLOCATABLE :: CN_target_2pfcforcing !! |
|---|
| 631 | !$OMP THREADPRIVATE(CN_target_2pfcforcing) |
|---|
| 632 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE :: n_mineralisation_2pfcforcing !! |
|---|
| 633 | !$OMP THREADPRIVATE(n_mineralisation_2pfcforcing) |
|---|
| 634 | |
|---|
| 635 | !--- |
|---|
| 636 | REAL(r_std), SAVE :: tau_longterm |
|---|
| 637 | !$OMP THREADPRIVATE(tau_longterm) |
|---|
| 638 | REAL(r_std),SAVE :: dt_days=zero !! Time step of STOMATE (days) |
|---|
| 639 | !$OMP THREADPRIVATE(dt_days) |
|---|
| 640 | INTEGER(i_std),SAVE :: days_since_beg=0 !! Number of full days done since the start of the simulation |
|---|
| 641 | !$OMP THREADPRIVATE(days_since_beg) |
|---|
| 642 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: nforce !! Number of states calculated for the soil forcing |
|---|
| 643 | !! variables (unitless), dimension(::nparan*::nbyear) both |
|---|
| 644 | !! given in the run definition file |
|---|
| 645 | !$OMP THREADPRIVATE(nforce) |
|---|
| 646 | INTEGER(i_std), SAVE :: spinup_period !! Period of years used to calculate the resolution of the system for spinup analytic. |
|---|
| 647 | !! This period correspond in most cases to the period of years of forcing data used |
|---|
| 648 | !$OMP THREADPRIVATE(spinup_period) |
|---|
| 649 | INTEGER,PARAMETER :: r_typ = nf90_real4 !! Specify data format (server dependent) |
|---|
| 650 | !--- |
|---|
| 651 | LOGICAL, SAVE :: do_slow=.FALSE. !! Flag that determines whether stomate_accu calculates |
|---|
| 652 | !! the sum(do_slow=.FALSE.) or the mean |
|---|
| 653 | !! (do_slow=.TRUE.) |
|---|
| 654 | !$OMP THREADPRIVATE(do_slow) |
|---|
| 655 | LOGICAL, SAVE :: l_first_stomate = .TRUE.!! Is this the first call of stomate? |
|---|
| 656 | !$OMP THREADPRIVATE(l_first_stomate) |
|---|
| 657 | !--- |
|---|
| 658 | |
|---|
| 659 | REAL(r_std),DIMENSION(:),ALLOCATABLE,SAVE :: circ_class_dist !! When the circumference class distribution |
|---|
| 660 | !! is redone due to empty classes, this is the |
|---|
| 661 | !! tree distribution used. Notice that this distribution |
|---|
| 662 | !! is normalized after being read in. |
|---|
| 663 | !$OMP THREADPRIVATE(circ_class_dist) |
|---|
| 664 | REAL(r_std),DIMENSION(:),ALLOCATABLE,SAVE :: qmd_init !! quadratic mean diameter of a newly planted PFT (m) |
|---|
| 665 | !$OMP THREADPRIVATE(qmd_init) |
|---|
| 666 | REAL(r_std),DIMENSION(:,:),ALLOCATABLE,SAVE :: dia_init !! initial diameter distribution of a newly planted PFT (m) |
|---|
| 667 | !$OMP THREADPRIVATE(dia_init) |
|---|
| 668 | REAL(r_std),DIMENSION(:),ALLOCATABLE,SAVE :: st_dist !! During self-thinning, we need to decide which |
|---|
| 669 | !! circumference classes to kill trees in. This |
|---|
| 670 | !! is the distribution that tells us this. Notice that |
|---|
| 671 | !! it is normalized after being read in. |
|---|
| 672 | !$OMP THREADPRIVATE(st_dist) |
|---|
| 673 | INTEGER(i_std), SAVE :: global_years !! Global counter of years (year) |
|---|
| 674 | !$OMP THREADPRIVATE(global_years) |
|---|
| 675 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: ok_equilibrium !! Logical array marking the points where the resolution is ok |
|---|
| 676 | !! (true/false) |
|---|
| 677 | !$OMP THREADPRIVATE(ok_equilibrium) |
|---|
| 678 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: carbon_eq !! Logical array to mark the carbon pools at equilibrium ? |
|---|
| 679 | !! If true, the job stops. (true/false) |
|---|
| 680 | !$OMP THREADPRIVATE(carbon_eq) |
|---|
| 681 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: nbp_accu_flux !! Accumulated Net Biospheric Production over the year (gC.m^2 ) |
|---|
| 682 | !$OMP THREADPRIVATE(nbp_accu_flux) |
|---|
| 683 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: nbp_pool_start !! Biomass pool as calculated from the |
|---|
| 684 | !! previous time step (gC/N m-2) |
|---|
| 685 | !$OMP THREADPRIVATE(nbp_pool_start) |
|---|
| 686 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:,:) :: matrixA !! matrix containing the fluxes between the carbon pools |
|---|
| 687 | !! per sechiba time step |
|---|
| 688 | !! @tex $(gC.m^2.day^{-1})$ @endtex |
|---|
| 689 | !$OMP THREADPRIVATE(matrixA) |
|---|
| 690 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:) :: vectorB !! vector containing the litter increase per sechiba time step |
|---|
| 691 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 692 | !$OMP THREADPRIVATE(vectorB) |
|---|
| 693 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: matrixV !! matrix containing the accumulated values of matrixA |
|---|
| 694 | !$OMP THREADPRIVATE(matrixV) |
|---|
| 695 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: vectorU !! matrix containing the accumulated values of vectorB |
|---|
| 696 | !$OMP THREADPRIVATE(vectorU) |
|---|
| 697 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: matrixW !! matrix containing the opposite of matrixA |
|---|
| 698 | !$OMP THREADPRIVATE(matrixW) |
|---|
| 699 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: previous_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 700 | !! method in the previous resolution |
|---|
| 701 | !$OMP THREADPRIVATE(previous_stock) |
|---|
| 702 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: current_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 703 | !! method in the current resolution |
|---|
| 704 | !$OMP THREADPRIVATE(current_stock) |
|---|
| 705 | REAL(r_std), SAVE :: eps_carbon !! Stopping criterion for carbon pools (unitless,0-1) |
|---|
| 706 | !$OMP THREADPRIVATE(eps_carbon) |
|---|
| 707 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:) :: sigma !! Threshold for indivudal tree growth (m, trees whose |
|---|
| 708 | !! circumference is smaller than sigma don't grow much) |
|---|
| 709 | !$OMP THREADPRIVATE(sigma) |
|---|
| 710 | |
|---|
| 711 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: age_stand !! Age of stand (years) |
|---|
| 712 | !$OMP THREADPRIVATE(age_stand) |
|---|
| 713 | |
|---|
| 714 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: rotation_n !! Rotation number (number of rotation since pft is managed) |
|---|
| 715 | !$OMP THREADPRIVATE(rotation_n) |
|---|
| 716 | |
|---|
| 717 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: last_cut !! Years since last thinning (years) |
|---|
| 718 | !$OMP THREADPRIVATE(last_cut) |
|---|
| 719 | |
|---|
| 720 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: CN_som_litter_longterm !! Longterm CN ratio of litter and som pools (gC/gN) |
|---|
| 721 | !$OMP THREADPRIVATE(CN_som_litter_longterm) |
|---|
| 722 | REAL(r_std), SAVE :: tau_CN_longterm !! Counter used for calculating the longterm CN ratio of SOM and litter pools (seconds) |
|---|
| 723 | !$OMP THREADPRIVATE(tau_CN_longterm) |
|---|
| 724 | |
|---|
| 725 | ! Functional Allocation |
|---|
| 726 | |
|---|
| 727 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: KF !! Scaling factor to convert sapwood mass |
|---|
| 728 | !! into leaf mass (m). The initial value is calculated |
|---|
| 729 | !! in prescribe and updated during allocation |
|---|
| 730 | !$OMP THREADPRIVATE(KF) |
|---|
| 731 | |
|---|
| 732 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: k_latosa_adapt !! Leaf to sapwood area adapted for waterstress. |
|---|
| 733 | !! Adaptation takes place at the end of the year |
|---|
| 734 | !! (m) |
|---|
| 735 | !$OMP THREADPRIVATE(k_latosa_adapt) |
|---|
| 736 | |
|---|
| 737 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: harvest_pool_acc !! the accumulative value of harvest_pool throughout everyday. |
|---|
| 738 | !$OMP THREADPRIVATE(harvest_pool_acc) |
|---|
| 739 | |
|---|
| 740 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_type !! Type of management that resulted |
|---|
| 741 | !! in the harvest (unitless) |
|---|
| 742 | !$OMP THREADPRIVATE(harvest_type) |
|---|
| 743 | |
|---|
| 744 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_cut !! Type of cutting that was used for the harvest |
|---|
| 745 | !! (unitless) |
|---|
| 746 | !$OMP THREADPRIVATE(harvest_cut) |
|---|
| 747 | |
|---|
| 748 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_area_acc !! Harvested area (m^{2}) |
|---|
| 749 | !$OMP THREADPRIVATE(harvest_area_acc) |
|---|
| 750 | |
|---|
| 751 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: gap_area_save !! Total gap area created by more than 30% basal area loss |
|---|
| 752 | !! in the last 5 years (m^{2}) |
|---|
| 753 | !$OMP THREADPRIVATE(gap_area_save) |
|---|
| 754 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: total_ba_init !! Total basal area saved at the first day of the year per PFT |
|---|
| 755 | !! (m^{2}/m^{2}) |
|---|
| 756 | !$OMP THREADPRIVATE(total_ba_init) |
|---|
| 757 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: harvest_pool_bound !! The boundaries of the diameter classes |
|---|
| 758 | !! in the wood harvest pools |
|---|
| 759 | !! @tex $(m)$ @endtex |
|---|
| 760 | !$OMP THREADPRIVATE(harvest_pool_bound) |
|---|
| 761 | |
|---|
| 762 | !! START : stomate_pest module (bark beetle outbreak) |
|---|
| 763 | |
|---|
| 764 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: risk_index !! index used to estimate beetle !! infestation (unitless) |
|---|
| 765 | !$OMP THREADPRIVATE(risk_index) |
|---|
| 766 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:, :) :: windthrow_suscept_monitor !! monitor bettle outbreak |
|---|
| 767 | !!susceptibility to woody !!debris from windthrow |
|---|
| 768 | !!(unitless) |
|---|
| 769 | !$OMP THREADPRIVATE(windthrow_suscept_monitor) |
|---|
| 770 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:, :) :: beetle_pressure_monitor !! monitor pressure of the |
|---|
| 771 | !!beetle population (unitless) |
|---|
| 772 | !$OMP THREADPRIVATE(beetle_pressure_monitor) |
|---|
| 773 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:, :) :: suscept_index_monitor !! monitor overall beetle |
|---|
| 774 | !! outbreak susceptibility |
|---|
| 775 | !!(unitless) |
|---|
| 776 | !$OMP THREADPRIVATE(suscept_index_monitor) |
|---|
| 777 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: beetle_diapause !! A beetle phenology |
|---|
| 778 | !! stage which trigger |
|---|
| 779 | !! the reproduction (binary) |
|---|
| 780 | !$OMP THREADPRIVATE(beetle_diapause) |
|---|
| 781 | ! Variables related to bark beetle module |
|---|
| 782 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: wood_leftover_legacy !! woody litter used in the |
|---|
| 783 | !! calculation of the windthrow !! susceptibility (gC.m-2) |
|---|
| 784 | !$OMP THREADPRIVATE(wood_leftover_legacy) |
|---|
| 785 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: season_drought_legacy !! poxy of the tree healthiness |
|---|
| 786 | !! use in the calculation of |
|---|
| 787 | !! the beetle outbreak |
|---|
| 788 | !! susceptibility (unitless) |
|---|
| 789 | !$OMP THREADPRIVATE(season_drought_legacy) |
|---|
| 790 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: beetle_generation_index !! number of beetle generations |
|---|
| 791 | !! per year |
|---|
| 792 | !$OMP THREADPRIVATE(beetle_generation_index) |
|---|
| 793 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: risk_index_legacy !! use to trigger the |
|---|
| 794 | !! epidemic flag (unitless) |
|---|
| 795 | !$OMP THREADPRIVATE(risk_index_legacy) |
|---|
| 796 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: beetle_damage_legacy !! Stored beetle damage use |
|---|
| 797 | !!in the estimation of the |
|---|
| 798 | !!woody leftover (gC.m-2) |
|---|
| 799 | !$OMP THREADPRIVATE(beetle_damage_legacy) |
|---|
| 800 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: beetle_flyaway !! Remaining rate of beetle |
|---|
| 801 | !! pop after the end of and |
|---|
| 802 | !!epidemic (unitless) |
|---|
| 803 | !$OMP THREADPRIVATE(beetle_flyaway) |
|---|
| 804 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: beetle_pop_legacy !! Proxy of the size of the |
|---|
| 805 | !! beetle population (unitless) |
|---|
| 806 | !$OMP THREADPRIVATE(beetle_pop_legacy) |
|---|
| 807 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: epidemic_monitor !! monitor smoothed risk |
|---|
| 808 | !!index use to trigger the |
|---|
| 809 | !!epidemic flag (unitless) |
|---|
| 810 | !$OMP THREADPRIVATE(epidemic_monitor) |
|---|
| 811 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: epidemic !! Flag giving the epidemic |
|---|
| 812 | !! stage of a beetle population |
|---|
| 813 | !! (binary) |
|---|
| 814 | !$OMP THREADPRIVATE(epidemic) |
|---|
| 815 | |
|---|
| 816 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: sumTeff !! Sum of air temperature used !! in the calculation of the |
|---|
| 817 | !! beetle diapause (°C) |
|---|
| 818 | !$OMP THREADPRIVATE(sumTeff) |
|---|
| 819 | !! END : stomate_pest module |
|---|
| 820 | |
|---|
| 821 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: mai !! The mean annual increment used in |
|---|
| 822 | !! forestry. It is the average change |
|---|
| 823 | !! in the wood volume of of the trunk |
|---|
| 824 | !! over the lifetime of the forest. |
|---|
| 825 | !! @tex $(m**3 / m**2 / year)$ @endtex |
|---|
| 826 | !$OMP THREADPRIVATE(mai) |
|---|
| 827 | |
|---|
| 828 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: pai !! The period annual increment used in |
|---|
| 829 | !! forestry. It is the average change |
|---|
| 830 | !! in the wood volume of of the trunk |
|---|
| 831 | !! over the past n_pai years of the forest, |
|---|
| 832 | !! where n_pai is defined in constants.f90. |
|---|
| 833 | !! @tex $(m**3 / m**2 / year)$ @endtex |
|---|
| 834 | !$OMP THREADPRIVATE(pai) |
|---|
| 835 | |
|---|
| 836 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: previous_wood_volume !! The volume of the tree trunks |
|---|
| 837 | !! in a stand for the previous year. |
|---|
| 838 | !! @tex $(m**3 / m**2 )$ @endtex |
|---|
| 839 | !$OMP THREADPRIVATE(previous_wood_volume) |
|---|
| 840 | |
|---|
| 841 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: mai_count !! The number of times we've |
|---|
| 842 | !! calculated the volume increment |
|---|
| 843 | !! for a stand |
|---|
| 844 | !$OMP THREADPRIVATE(mai_count) |
|---|
| 845 | |
|---|
| 846 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: coppice_dens !! The density of a coppice at the first |
|---|
| 847 | !! cutting. |
|---|
| 848 | !! @tex $( 1 / m**2 )$ @endtex |
|---|
| 849 | !$OMP THREADPRIVATE(coppice_dens) |
|---|
| 850 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: rue_longterm !! Longterm radiation use efficiency (??units??) |
|---|
| 851 | !$OMP THREADPRIVATE(rue_longterm) |
|---|
| 852 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: leaf_age_crit !! critical leaf age (days) |
|---|
| 853 | !$OMP THREADPRIVATE(leaf_age_crit) |
|---|
| 854 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: leaf_classes !! Width of each leaf age class (days) |
|---|
| 855 | !$OMP THREADPRIVATE(leaf_classes) |
|---|
| 856 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: lab_fac !! Activity of labile pool factor (??units??) |
|---|
| 857 | !$OMP THREADPRIVATE(lab_fac) |
|---|
| 858 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:) :: bm_sapl_2D |
|---|
| 859 | !$OMP THREADPRIVATE(bm_sapl_2D) |
|---|
| 860 | REAL(r_std),SAVE :: dt_forcesoil !! Time step of soil forcing file (days) |
|---|
| 861 | !$OMP THREADPRIVATE(dt_forcesoil) |
|---|
| 862 | INTEGER(i_std),PARAMETER :: nparanmax=366 !! Maximum number of time steps per year for forcesoil |
|---|
| 863 | INTEGER(i_std),SAVE :: nparan !! Number of time steps per year for forcesoil read from run definition (unitless) |
|---|
| 864 | !$OMP THREADPRIVATE(nparan) |
|---|
| 865 | INTEGER(i_std),SAVE :: nbyear=1 !! Number of years saved for forcesoil (unitless) |
|---|
| 866 | !$OMP THREADPRIVATE(nbyear) |
|---|
| 867 | INTEGER(i_std),SAVE :: iatt !! Time step of forcing of soil processes (iatt = 1 to ::nparan*::nbyear) |
|---|
| 868 | !$OMP THREADPRIVATE(iatt) |
|---|
| 869 | INTEGER(i_std),SAVE :: iatt_old=1 !! Previous ::iatt |
|---|
| 870 | !$OMP THREADPRIVATE(iatt_old) |
|---|
| 871 | CHARACTER(LEN=100), SAVE :: Cforcing_discretization_name !! Name of forcing file 2 |
|---|
| 872 | !$OMP THREADPRIVATE(Cforcing_discretization_name) |
|---|
| 873 | INTEGER(i_std), SAVE :: frozen_respiration_func !! Method for soil decomposition function |
|---|
| 874 | !$OMP THREADPRIVATE(frozen_respiration_func) |
|---|
| 875 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: forest_managed !! forest management flag (is the forest being managed?) |
|---|
| 876 | !! (0-4,unitless) |
|---|
| 877 | !$OMP THREADPRIVATE(forest_managed) |
|---|
| 878 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: spinup_clearcut !! Map to indicate clearcut event during spinup for a given PFT and pixel. |
|---|
| 879 | !! (zero = no clearcut; one = clearcut) |
|---|
| 880 | !$OMP THREADPRIVATE(spinup_clearcut) |
|---|
| 881 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: species_change_map !! A map which gives the PFT number that each |
|---|
| 882 | !! PFT will be replanted as in case of a clearcut. |
|---|
| 883 | !! (1-nvm,unitless) |
|---|
| 884 | !$OMP THREADPRIVATE(species_change_map) |
|---|
| 885 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: fm_change_map !! A map which gives the desired FM strategy when |
|---|
| 886 | !! the PFT will be replanted after a clearcut. |
|---|
| 887 | !! (1-nvm,unitless) |
|---|
| 888 | !$OMP THREADPRIVATE(fm_change_map) |
|---|
| 889 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:,:) :: lpft_replant !! Indicates if this PFT has either died this year |
|---|
| 890 | !! or been clearcut/coppiced. If it has, it is not |
|---|
| 891 | !! replanted until the end of the year. |
|---|
| 892 | !$OMP THREADPRIVATE(lpft_replant) |
|---|
| 893 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: litter_demand !! The amount of litter which will |
|---|
| 894 | !! be moved from forest to crop pools |
|---|
| 895 | !! at the end of the year. |
|---|
| 896 | !! @tex $( gC / year )$ @endtex |
|---|
| 897 | !$OMP THREADPRIVATE(litter_demand) |
|---|
| 898 | |
|---|
| 899 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: wstress_season !! Water stress factor, based on hum_rel_daily |
|---|
| 900 | !! (unitless, 0-1) |
|---|
| 901 | !$OMP THREADPRIVATE(wstress_season) |
|---|
| 902 | |
|---|
| 903 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: wstress_month !! Water stress factor, based on hum_rel_daily |
|---|
| 904 | !! (unitless, 0-1) |
|---|
| 905 | !$OMP THREADPRIVATE(wstress_month) |
|---|
| 906 | |
|---|
| 907 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: light_tran_to_floor_season !! Mean seasonal fraction of light transmitted |
|---|
| 908 | !! to canopy levels |
|---|
| 909 | !$OMP THREADPRIVATE(light_tran_to_floor_season) |
|---|
| 910 | INTEGER(i_std), SAVE :: printlev_loc !! Local level of text output for current module |
|---|
| 911 | !$OMP THREADPRIVATE(printlev_loc) |
|---|
| 912 | |
|---|
| 913 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: sugar_load !! Relative sugar loading of the labile pool (unitless) |
|---|
| 914 | !$OMP THREADPRIVATE(sugar_load) |
|---|
| 915 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: grow_season_len !! growing season length in days for deciduous PFTs. |
|---|
| 916 | !$OMP THREADPRIVATE(grow_season_len) |
|---|
| 917 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: doy_start_gs !! growing season starting day of year (DOY) for |
|---|
| 918 | !! deciduous PFTs. |
|---|
| 919 | !$OMP THREADPRIVATE(doy_start_gs) |
|---|
| 920 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: doy_end_gs !! growing season end day of year (DOY) for |
|---|
| 921 | !! deciduous PFTs. |
|---|
| 922 | !$OMP THREADPRIVATE(doy_end_gs) |
|---|
| 923 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: mean_start_gs !! mean growing season starting day for |
|---|
| 924 | !! deciduous PFTs. |
|---|
| 925 | !$OMP THREADPRIVATE(mean_start_gs) |
|---|
| 926 | |
|---|
| 927 | PUBLIC dt_days, days_since_beg, do_slow |
|---|
| 928 | |
|---|
| 929 | CONTAINS |
|---|
| 930 | |
|---|
| 931 | |
|---|
| 932 | !! ================================================================================================================================ |
|---|
| 933 | !! SUBROUTINE : stomate_initialize |
|---|
| 934 | !! |
|---|
| 935 | !>\BRIEF Initialization routine for stomate module. |
|---|
| 936 | !! |
|---|
| 937 | !! DESCRIPTION : Initialization routine for stomate module. Read options from parameter file, allocate variables, read variables |
|---|
| 938 | !! from restart file and initialize variables if necessary. |
|---|
| 939 | !! |
|---|
| 940 | !! \n |
|---|
| 941 | !_ ================================================================================================================================ |
|---|
| 942 | |
|---|
| 943 | SUBROUTINE stomate_initialize & |
|---|
| 944 | (kjit, kjpij, kjpindex, & |
|---|
| 945 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 946 | index, lalo, neighbours, resolution, & |
|---|
| 947 | contfrac, clay, silt, & |
|---|
| 948 | bulk, temp_air, & |
|---|
| 949 | veget, veget_max, & |
|---|
| 950 | deadleaf_cover, assim_param, circ_class_biomass, circ_class_n, & |
|---|
| 951 | lai_per_level, laieff_fit, temp_growth, & |
|---|
| 952 | som_total, heat_Zimov, altmax, depth_organic_soil, & |
|---|
| 953 | cn_leaf_init_2D) |
|---|
| 954 | |
|---|
| 955 | IMPLICIT NONE |
|---|
| 956 | !! 0. Variable and parameter declaration |
|---|
| 957 | !! 0.1 Input variables |
|---|
| 958 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 959 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 960 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 961 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 962 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 963 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier(unitless) |
|---|
| 964 | INTEGER(i_std),DIMENSION(:),INTENT(in) :: index !! The indices of the terrestrial pixels only (unitless) |
|---|
| 965 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) for pixels (degrees) |
|---|
| 966 | INTEGER(i_std),DIMENSION(:,:),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM (unitless) |
|---|
| 967 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of the gridbox |
|---|
| 968 | REAL(r_std),DIMENSION (:), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 969 | REAL(r_std),DIMENSION(:),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 970 | REAL(r_std),DIMENSION(:),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 971 | REAL(r_std),DIMENSION(:),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 972 | REAL(r_std),DIMENSION(:),INTENT(in) :: temp_air !! Air temperature at first atmospheric model layer (K) |
|---|
| 973 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 974 | !! non-biological fraction (unitless) |
|---|
| 975 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 976 | !! non-biological fraction (unitless) |
|---|
| 977 | REAL(r_std),DIMENSION(:,:), INTENT(in) :: cn_leaf_init_2D !! initial leaf C/N ratio |
|---|
| 978 | |
|---|
| 979 | !! 0.2 Output variables |
|---|
| 980 | |
|---|
| 981 | REAL(r_std),DIMENSION(:),INTENT(out) :: deadleaf_cover !! Fraction of soil covered by dead leaves (unitless) |
|---|
| 982 | REAL(r_std),DIMENSION(:,:,:),INTENT(out) :: assim_param !! min+max+opt temperatures (K) & vmax for photosynthesis |
|---|
| 983 | !! @tex $(\mu mol m^{-2}s^{-1})$ @endtex |
|---|
| 984 | REAL(r_std),DIMENSION(:),INTENT(out) :: temp_growth !! Growth temperature (ðC) |
|---|
| 985 | !! Is equal to t2m_month |
|---|
| 986 | REAL(r_std), DIMENSION(:,:,:), INTENT (out) :: heat_Zimov !! heating associated with decomposition [W/m**3 soil] |
|---|
| 987 | REAL(r_std),DIMENSION(:,:), INTENT(out) :: altmax !! Maximul active layer thickness (m). Be careful, here active means non frozen. |
|---|
| 988 | !! Not related with the active soil carbon pool. |
|---|
| 989 | REAL(r_std), DIMENSION(:), INTENT (out) :: depth_organic_soil!! Depth at which there is still organic matter (m) |
|---|
| 990 | |
|---|
| 991 | !! 0.3 Modified variables |
|---|
| 992 | REAL(r_std),DIMENSION(:,:,:,:,:),INTENT(inout) :: circ_class_biomass!! Biomass per circumference class @tex $(gC tree^{-1})$ @endtex |
|---|
| 993 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: circ_class_n !! Number of trees within each circumference |
|---|
| 994 | REAL(r_std), DIMENSION(:,:,:), INTENT(inout) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 995 | !! @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 996 | TYPE(laieff_type),DIMENSION(:,:,:),INTENT(inout):: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 997 | |
|---|
| 998 | REAL(r_std), DIMENSION(:,:,:,:), INTENT (inout) :: som_total !! total soil carbon for use in thermal calcs (g/m**3) |
|---|
| 999 | |
|---|
| 1000 | !! 0.4 Local variables |
|---|
| 1001 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 1002 | INTEGER(i_std) :: l,k,ji,jv,i,j,ipts !! indices |
|---|
| 1003 | INTEGER(i_std) :: ivm,icir !! indices |
|---|
| 1004 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 1005 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 1006 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1007 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 1008 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 1009 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 1010 | !! time step on one processor (Mb) |
|---|
| 1011 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 1012 | !! time step on all processors(Mb) |
|---|
| 1013 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 1014 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 1015 | INTEGER(i_std) :: direct !! |
|---|
| 1016 | LOGICAL :: l_error !! error flag |
|---|
| 1017 | REAL(r_std) :: temp_total !! Used for renormalizing |
|---|
| 1018 | INTEGER(i_std),ALLOCATABLE, DIMENSION(:,:) :: fm_map_temp !! A temporary variable to hold the forest |
|---|
| 1019 | !! management map which is read in from a file |
|---|
| 1020 | !! (0-4,unitless) |
|---|
| 1021 | INTEGER(i_std), ALLOCATABLE, DIMENSION(:,:) :: species_map_temp !! A temporary variable to hold the species |
|---|
| 1022 | !! change map which is read in from a file |
|---|
| 1023 | !! (1-nvm,unitless) |
|---|
| 1024 | INTEGER(i_std) :: forest_managed_temp !! Temporary variable to affect forest_managed(1,6) |
|---|
| 1025 | CHARACTER(LEN=200) :: temp_str |
|---|
| 1026 | |
|---|
| 1027 | !================================================================================================================================ |
|---|
| 1028 | |
|---|
| 1029 | !! 1. Initialize variable |
|---|
| 1030 | |
|---|
| 1031 | !! Initialize local printlev |
|---|
| 1032 | printlev_loc=get_printlev('stomate') |
|---|
| 1033 | |
|---|
| 1034 | !! Initialize module stomate_laieff |
|---|
| 1035 | CALL stomate_laieff_initialize() |
|---|
| 1036 | |
|---|
| 1037 | !! Initialize module sapiens_agriculture |
|---|
| 1038 | CALL sapiens_agriculture_initialize() |
|---|
| 1039 | |
|---|
| 1040 | !! Update flag |
|---|
| 1041 | l_first_stomate = .FALSE. |
|---|
| 1042 | |
|---|
| 1043 | !! 1.1 Store current time step in a common variable |
|---|
| 1044 | itime = kjit |
|---|
| 1045 | |
|---|
| 1046 | !!$ !! 1.3.1 Set lai |
|---|
| 1047 | !!$ lai(:,ibare_sechiba) = zero |
|---|
| 1048 | !!$ DO i = 1, kjpindex |
|---|
| 1049 | !!$ DO j = 2,nvm |
|---|
| 1050 | !!$ lai(i,j) = cc_to_lai(circ_class_biomass(i,j,:,ileaf,icarbon),circ_class_n(i,j,:),j) |
|---|
| 1051 | !!$ ENDDO |
|---|
| 1052 | !!$ ENDDO |
|---|
| 1053 | |
|---|
| 1054 | !! 1.4.0 Parameters for spinup |
|---|
| 1055 | ! |
|---|
| 1056 | eps_carbon = 0.01 |
|---|
| 1057 | !Config Key = EPS_CARBON |
|---|
| 1058 | !Config Desc = Allowed error on carbon stock |
|---|
| 1059 | !Config If = SPINUP_ANALYTIC |
|---|
| 1060 | !Config Def = 0.01 |
|---|
| 1061 | !Config Help = |
|---|
| 1062 | !Config Units = [%] |
|---|
| 1063 | CALL getin_p('EPS_CARBON',eps_carbon) |
|---|
| 1064 | |
|---|
| 1065 | |
|---|
| 1066 | !Config Key = SPINUP_PERIOD |
|---|
| 1067 | !Config Desc = Period to calulcate equilibrium during spinup analytic |
|---|
| 1068 | !Config If = SPINUP_ANALYTIC |
|---|
| 1069 | !Config Def = -1 |
|---|
| 1070 | !Config Help = Period corresponds in most cases to the number of years of forcing data used in the spinup. |
|---|
| 1071 | !Config Units = [years] |
|---|
| 1072 | spinup_period = -1 |
|---|
| 1073 | CALL getin_p('SPINUP_PERIOD',spinup_period) |
|---|
| 1074 | |
|---|
| 1075 | ! Check spinup_period values. |
|---|
| 1076 | ! For periods uptil 6 years, to obtain equilibrium, a bigger period have to be used |
|---|
| 1077 | ! and therefore spinup_period is adjusted to 10 years. |
|---|
| 1078 | IF (spinup_analytic) THEN |
|---|
| 1079 | IF (spinup_period <= 0) THEN |
|---|
| 1080 | WRITE(numout,*) 'Error in parameter spinup_period. This parameter must be > 0 : spinup_period=',spinup_period |
|---|
| 1081 | CALL ipslerr_p (3,'stomate_initialize', & |
|---|
| 1082 | 'Parameter spinup_period must be set to a positive integer.', & |
|---|
| 1083 | 'Set this parameter to the number of years of forcing data used for the spinup.', & |
|---|
| 1084 | '') |
|---|
| 1085 | END IF |
|---|
| 1086 | IF (printlev >=1) WRITE(numout,*) 'Spinup analytic is activated using eps_carbon=',& |
|---|
| 1087 | eps_carbon, ' and spinup_period=',spinup_period |
|---|
| 1088 | END IF |
|---|
| 1089 | |
|---|
| 1090 | |
|---|
| 1091 | !! 1.4.1 Allocate memory for all variables in stomate |
|---|
| 1092 | ! Allocate memory for all variables in stomate, build new index |
|---|
| 1093 | ! tables accounting for the PFTs, read and check flags and set file |
|---|
| 1094 | ! identifier for restart and history files. |
|---|
| 1095 | CALL stomate_init (kjpij, kjpindex, index, lalo, & |
|---|
| 1096 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 1097 | |
|---|
| 1098 | !! 1.4.2 Initialization some parameters |
|---|
| 1099 | ! Note that lots of this is now taken care off in |
|---|
| 1100 | ! constantes_mtc.f90 and pft_parameters. f90. |
|---|
| 1101 | CALL data |
|---|
| 1102 | |
|---|
| 1103 | !! 1.4.3 Initial conditions |
|---|
| 1104 | |
|---|
| 1105 | !! 1.4.3.1 Read initial values for STOMATE's variables from the _restart_ file |
|---|
| 1106 | |
|---|
| 1107 | !! 1.4.3.2 Read the management status |
|---|
| 1108 | !Config Key = FOREST_MANAGED |
|---|
| 1109 | !Config Desc = Forest management flag |
|---|
| 1110 | !Config If = OK_STOMATE |
|---|
| 1111 | !Config Def = 1 (unmanaged) |
|---|
| 1112 | !Config Help = forest management is always activated but a setting |
|---|
| 1113 | ! of ifm_none means don't do any human management. |
|---|
| 1114 | ! possible settings: 1: unmanaged, 2: high stand, |
|---|
| 1115 | ! 3: coppice, 4: short rotation coppice |
|---|
| 1116 | !Config Units = [FLAG] |
|---|
| 1117 | |
|---|
| 1118 | ! Temporary variable is needed to read a scalar value from run.def before |
|---|
| 1119 | ! putting it into the final 2D variable |
|---|
| 1120 | forest_managed_temp = ifm_none |
|---|
| 1121 | CALL getin_p('FOREST_MANAGED_FORCED',forest_managed_temp) |
|---|
| 1122 | forest_managed(:,:)=forest_managed_temp |
|---|
| 1123 | |
|---|
| 1124 | ! We need to have the option to read the forest management |
|---|
| 1125 | ! strategy from a map (NetCDF file). If this option is |
|---|
| 1126 | ! equal to Y, we will overwrite the forest_managed_forced |
|---|
| 1127 | ! option above, so you should be careful to only use one |
|---|
| 1128 | ! or the other. |
|---|
| 1129 | ! If we prescribe a species change we will also overwrite |
|---|
| 1130 | ! forest_managed so we don't want to read it from a file |
|---|
| 1131 | ! but we want to use the restart values |
|---|
| 1132 | IF(ok_read_fm_map)THEN |
|---|
| 1133 | |
|---|
| 1134 | ! If we are using age classes, we read in the map in the same |
|---|
| 1135 | ! way but then we change it a bit to account for age classes. |
|---|
| 1136 | l_error = .FALSE. |
|---|
| 1137 | ALLOCATE(fm_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1138 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1139 | IF (l_error) THEN |
|---|
| 1140 | WRITE(numout,*) 'Problem with memory allocation: ' ,& |
|---|
| 1141 | 'temporary FM map ',kjpindex,nvmap |
|---|
| 1142 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1143 | 'Problem with memory allocation','','') |
|---|
| 1144 | ENDIF |
|---|
| 1145 | |
|---|
| 1146 | CALL sapiens_forestry_read_fm(kjpindex, lalo, neighbours, resolution, & |
|---|
| 1147 | contfrac, fm_map_temp) |
|---|
| 1148 | |
|---|
| 1149 | IF(nagec .GT. 1)THEN |
|---|
| 1150 | ! All age classes of the same PFT will have the same |
|---|
| 1151 | ! management |
|---|
| 1152 | DO jv = 1,nvm |
|---|
| 1153 | forest_managed(:,jv)=fm_map_temp(:,agec_group(jv)) |
|---|
| 1154 | ENDDO |
|---|
| 1155 | ELSE |
|---|
| 1156 | forest_managed(:,:)=fm_map_temp(:,:) |
|---|
| 1157 | ENDIF |
|---|
| 1158 | |
|---|
| 1159 | DEALLOCATE(fm_map_temp) |
|---|
| 1160 | |
|---|
| 1161 | ENDIF |
|---|
| 1162 | |
|---|
| 1163 | !! 1.4.3.3 Read clearcut status during spinup |
|---|
| 1164 | !Config Key = |
|---|
| 1165 | !Config Desc = Clearcut flag during spinup |
|---|
| 1166 | !Config If = OK_STOMATE |
|---|
| 1167 | !Config Def = 0 (not clearcut) |
|---|
| 1168 | !Config Help = |
|---|
| 1169 | !Config Units = [FLAG] |
|---|
| 1170 | |
|---|
| 1171 | ! Temporary variable is needed to read a scalar value from run.def before |
|---|
| 1172 | ! putting it into the final 2D variable |
|---|
| 1173 | spinup_clearcut(:,:)=0 |
|---|
| 1174 | |
|---|
| 1175 | ! We need to have the option to read the forest management |
|---|
| 1176 | ! strategy from a map (NetCDF file). If this option is |
|---|
| 1177 | ! equal to Y, we will overwrite the forest_managed_forced |
|---|
| 1178 | ! option above, so you should be careful to only use one |
|---|
| 1179 | ! or the other. |
|---|
| 1180 | IF(ok_read_sp_clearcut_map)THEN |
|---|
| 1181 | |
|---|
| 1182 | ! If we are using age classes, we read in the map in the same |
|---|
| 1183 | ! way but then we change it a bit to account for age classes. |
|---|
| 1184 | l_error = .FALSE. |
|---|
| 1185 | ALLOCATE(fm_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1186 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1187 | IF (l_error) THEN |
|---|
| 1188 | WRITE(numout,*) 'Problem with memory allocation: ' ,& |
|---|
| 1189 | 'temporary array used in reading clearcut map during spinup ',kjpindex,nvmap |
|---|
| 1190 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1191 | 'Problem with memory allocation','','') |
|---|
| 1192 | ENDIF |
|---|
| 1193 | |
|---|
| 1194 | CALL sapiens_forestry_read_spinup_clearcut(kjpindex, lalo, neighbours, resolution, & |
|---|
| 1195 | contfrac, fm_map_temp) |
|---|
| 1196 | |
|---|
| 1197 | IF(nagec .GT. 1)THEN |
|---|
| 1198 | ! All age classes of the same PFT will go through clearcut |
|---|
| 1199 | ! at the same time during spinup |
|---|
| 1200 | DO jv = 1,nvm |
|---|
| 1201 | spinup_clearcut(:,jv)=fm_map_temp(:,agec_group(jv)) |
|---|
| 1202 | ENDDO |
|---|
| 1203 | ELSE |
|---|
| 1204 | spinup_clearcut(:,:)=fm_map_temp(:,:) |
|---|
| 1205 | ENDIF |
|---|
| 1206 | |
|---|
| 1207 | DEALLOCATE(fm_map_temp) |
|---|
| 1208 | |
|---|
| 1209 | ENDIF |
|---|
| 1210 | |
|---|
| 1211 | ! Get values from _restart_ file. Note that only ::kjpindex, ::index, ::lalo |
|---|
| 1212 | ! and ::resolution are input variables, all others are output variables. |
|---|
| 1213 | CALL readrestart & |
|---|
| 1214 | (kjpindex, index, lalo, temp_air, & |
|---|
| 1215 | dt_days_read, days_since_beg, & |
|---|
| 1216 | adapted, regenerate, & |
|---|
| 1217 | vegstress_day, gdd_init_date, litterhum_daily, & |
|---|
| 1218 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 1219 | precip_daily, & |
|---|
| 1220 | gpp_daily, npp_daily, turnover_daily, turnover_resid, & |
|---|
| 1221 | vegstress_month, vegstress_week, vegstress_season,& |
|---|
| 1222 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 1223 | tsoil_month, fireindex, firelitter, & |
|---|
| 1224 | maxvegstress_lastyear, maxvegstress_thisyear, & |
|---|
| 1225 | minvegstress_lastyear, minvegstress_thisyear, & |
|---|
| 1226 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 1227 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 1228 | precip_lastyear, precip_thisyear, & |
|---|
| 1229 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, & |
|---|
| 1230 | ncd_dormance, ngd_minus5, & |
|---|
| 1231 | PFTpresent, npp_longterm, croot_longterm, n_reserve_longterm, & |
|---|
| 1232 | lm_lastyearmax, lm_thisyearmax, & |
|---|
| 1233 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 1234 | turnover_longterm, gpp_week, resp_maint_part, resp_maint_week, & |
|---|
| 1235 | leaf_age, leaf_frac, leaf_age_crit, plant_status, when_growthinit, age, & |
|---|
| 1236 | resp_hetero_d, resp_maint_d, resp_growth_d, co2_fire, atm_to_bm, & |
|---|
| 1237 | veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 1238 | time_hum_min, hum_min_dormance, litter, dead_leaves, & |
|---|
| 1239 | som, lignin_struc, lignin_wood, turnover_time,& |
|---|
| 1240 | co2_flux, fco2_lu, fco2_wh, fco2_ha, & |
|---|
| 1241 | prod_s, prod_m, prod_l, flux_s, flux_m, flux_l, & |
|---|
| 1242 | fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 1243 | bm_to_litter, bm_to_litter_resid, tree_bm_to_litter, & |
|---|
| 1244 | tree_bm_to_litter_resid, carb_mass_total, & |
|---|
| 1245 | Tseason, Tseason_length, Tseason_tmp, Tmin_spring_time, & |
|---|
| 1246 | global_years, ok_equilibrium, nbp_accu_flux, nbp_pool_start, & |
|---|
| 1247 | matrixV, vectorU, previous_stock, current_stock, & |
|---|
| 1248 | assim_param, CN_som_litter_longterm, & |
|---|
| 1249 | tau_CN_longterm, KF, k_latosa_adapt, & |
|---|
| 1250 | rue_longterm, cn_leaf_min_season, nstress_season, & |
|---|
| 1251 | soil_n_min, p_O2, bact, forest_managed, & |
|---|
| 1252 | species_change_map, fm_change_map, lpft_replant, lai_per_level, & |
|---|
| 1253 | laieff_fit, wstress_season, wstress_month, & |
|---|
| 1254 | age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 1255 | previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 1256 | light_tran_to_floor_season,daylight_count, veget_max, gap_area_save, & |
|---|
| 1257 | deepSOM_a, deepSOM_s, deepSOM_p, O2_soil, CH4_soil, O2_snow, CH4_snow, & |
|---|
| 1258 | heat_Zimov, altmax,depth_organic_soil,fixed_cryoturbation_depth, & |
|---|
| 1259 | cn_leaf_init_2D, sugar_load, harvest_cut, & |
|---|
| 1260 | harvest_pool_acc, harvest_area_acc, burried_litter, burried_fresh_ltr, & |
|---|
| 1261 | burried_fresh_som, burried_bact, burried_fungivores, & |
|---|
| 1262 | burried_min_nitro, burried_som, & |
|---|
| 1263 | burried_deepSOM_a, burried_deepSOM_s, burried_deepSOM_p,& |
|---|
| 1264 | wood_leftover_legacy, beetle_pop_legacy, season_drought_legacy,& |
|---|
| 1265 | risk_index_legacy, beetle_diapause, sumTeff, & |
|---|
| 1266 | beetle_generation_index, beetle_damage_legacy, beetle_flyaway, & |
|---|
| 1267 | epidemic,is_storm, count_storm, biomass_init_drought, kill_vessels, & |
|---|
| 1268 | vessel_loss_previous, grow_season_len, doy_start_gs, doy_end_gs, & |
|---|
| 1269 | mean_start_gs, total_ba_init) |
|---|
| 1270 | |
|---|
| 1271 | !! 1.4.3.4 Read litter raking map |
|---|
| 1272 | ! If we are doing litter raking, we need a map which |
|---|
| 1273 | ! tells us how much litter is required at every pixel. |
|---|
| 1274 | ! This number is independent of the PFTs. |
|---|
| 1275 | IF(ok_litter_raking)THEN |
|---|
| 1276 | |
|---|
| 1277 | CALL sapiens_forestry_read_litter(kjpindex, lalo, neighbours, resolution, & |
|---|
| 1278 | contfrac, litter_demand) |
|---|
| 1279 | |
|---|
| 1280 | ENDIF |
|---|
| 1281 | |
|---|
| 1282 | !! 1.4.3.5 Read species with which to replant |
|---|
| 1283 | ! If we are doing species change, we need to read in the map or force |
|---|
| 1284 | ! the PFT values. We do this after the restart because otherwise our |
|---|
| 1285 | ! values are overwritten. When we implement the species change we |
|---|
| 1286 | ! usually want to change FM as well (and sometime we even need it, i.e., |
|---|
| 1287 | ! when the current FM strategy is to coppice and we change the species |
|---|
| 1288 | ! to a conifer tree than we will need to change FM because conifers are |
|---|
| 1289 | ! typically not coppiced). Species change and FM change were implemented |
|---|
| 1290 | ! separatly because that was easier to test and debug but not all |
|---|
| 1291 | ! combinations were tested. The recommended setting is read de FM_desired |
|---|
| 1292 | ! map when using species change. |
|---|
| 1293 | IF(ok_change_species)THEN |
|---|
| 1294 | |
|---|
| 1295 | IF(printlev_loc>=4) WRITE(numout,*) 'Use the species change code' |
|---|
| 1296 | |
|---|
| 1297 | ! Read species change map |
|---|
| 1298 | IF(ok_read_species_change_map)THEN |
|---|
| 1299 | |
|---|
| 1300 | WRITE(numout,*) 'Reading species change map' |
|---|
| 1301 | |
|---|
| 1302 | ! Allocate |
|---|
| 1303 | l_error = .FALSE. |
|---|
| 1304 | ALLOCATE(species_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1305 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1306 | IF (l_error) THEN |
|---|
| 1307 | WRITE(numout,*) 'Problem with memory allocation: ', & |
|---|
| 1308 | kjpindex,nvmap |
|---|
| 1309 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1310 | 'Problem with memory allocation',& |
|---|
| 1311 | 'temporary species change map','') |
|---|
| 1312 | ENDIF |
|---|
| 1313 | |
|---|
| 1314 | CALL sapiens_forestry_read_species_change(kjpindex, lalo, neighbours, & |
|---|
| 1315 | resolution, contfrac, species_map_temp) |
|---|
| 1316 | |
|---|
| 1317 | ! If we are using age classes, we read in the map in the same |
|---|
| 1318 | ! way but then we change it a bit to account for age classes. |
|---|
| 1319 | IF(nagec .GT. 1)THEN |
|---|
| 1320 | |
|---|
| 1321 | ! All age classes of the same PFT will have the same |
|---|
| 1322 | ! management |
|---|
| 1323 | DO jv = 1,nvm |
|---|
| 1324 | species_change_map(:,jv)=species_map_temp(:,agec_group(jv)) |
|---|
| 1325 | ENDDO |
|---|
| 1326 | |
|---|
| 1327 | ELSE |
|---|
| 1328 | |
|---|
| 1329 | ! The number of pfts on the map is identical |
|---|
| 1330 | ! to the number of PFTs used in the simulation |
|---|
| 1331 | WRITE(numout,*) 'Reading single value for species change' |
|---|
| 1332 | species_change_map(:,:)=species_map_temp(:,:) |
|---|
| 1333 | |
|---|
| 1334 | ENDIF |
|---|
| 1335 | |
|---|
| 1336 | DEALLOCATE(species_map_temp) |
|---|
| 1337 | |
|---|
| 1338 | ELSE |
|---|
| 1339 | |
|---|
| 1340 | IF(printlev_loc>=4) WRITE(numout,*) 'Species change map NOT read' |
|---|
| 1341 | IF(printlev_loc>=4) WRITE(numout,*) 'species_change_force, ', & |
|---|
| 1342 | species_change_force |
|---|
| 1343 | IF (species_change_force .EQ. -9999) THEN |
|---|
| 1344 | |
|---|
| 1345 | ! If we end-up here the user has set-up the model |
|---|
| 1346 | ! such that we use the species_change code but only |
|---|
| 1347 | ! to change the management. To keep the code simple |
|---|
| 1348 | ! we will use a dummy species_change_map |
|---|
| 1349 | IF(printlev_loc>=4) WRITE(numout,*) 'Use veget_max instead' |
|---|
| 1350 | |
|---|
| 1351 | ! All age classes of the same PFT will have the same |
|---|
| 1352 | ! management |
|---|
| 1353 | DO jv = 1,nvm |
|---|
| 1354 | species_change_map(:,jv) = agec_group(jv) |
|---|
| 1355 | ENDDO |
|---|
| 1356 | |
|---|
| 1357 | ELSE |
|---|
| 1358 | |
|---|
| 1359 | ! Use a single value (::species_change_force) instead |
|---|
| 1360 | ! of the information from a map. This was implemented |
|---|
| 1361 | ! as a feature for testing and/or debugging. It allows |
|---|
| 1362 | ! to test on a single pixel without reading maps. |
|---|
| 1363 | IF(printlev_loc>=4) WRITE(numout,*) 'Use ::species_change_force' |
|---|
| 1364 | species_change_map(:,:)=species_change_force |
|---|
| 1365 | |
|---|
| 1366 | ENDIF |
|---|
| 1367 | |
|---|
| 1368 | ENDIF |
|---|
| 1369 | |
|---|
| 1370 | ! If we apply a species change we will also prescribe a new |
|---|
| 1371 | ! management strategy but we need to decide whether we will |
|---|
| 1372 | ! read the desired management from a map or use a single |
|---|
| 1373 | ! prescribed value instead |
|---|
| 1374 | |
|---|
| 1375 | ! Read species change map |
|---|
| 1376 | IF(ok_read_desired_fm_map)THEN |
|---|
| 1377 | |
|---|
| 1378 | WRITE(numout,*) 'Reading desired FM map' |
|---|
| 1379 | ! Allocate |
|---|
| 1380 | l_error = .FALSE. |
|---|
| 1381 | ALLOCATE(fm_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1382 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1383 | IF (l_error) THEN |
|---|
| 1384 | WRITE(numout,*) 'Problem with memory allocation: ', & |
|---|
| 1385 | kjpindex,nvmap |
|---|
| 1386 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1387 | 'Problem with memory allocation',& |
|---|
| 1388 | 'temporary fm change map','') |
|---|
| 1389 | ENDIF |
|---|
| 1390 | |
|---|
| 1391 | ! If we are using age classes, we read in the map in the same |
|---|
| 1392 | ! way but then we change it a bit to account for age classes. |
|---|
| 1393 | CALL sapiens_forestry_read_desired_fm(kjpindex, lalo, neighbours, & |
|---|
| 1394 | resolution, contfrac, fm_map_temp) |
|---|
| 1395 | |
|---|
| 1396 | IF(nagec .GT. 1)THEN |
|---|
| 1397 | |
|---|
| 1398 | ! All age classes of the same PFT will have the same |
|---|
| 1399 | ! management |
|---|
| 1400 | DO jv = 1,nvm |
|---|
| 1401 | fm_change_map(:,jv)=fm_map_temp(:,agec_group(jv)) |
|---|
| 1402 | ENDDO |
|---|
| 1403 | |
|---|
| 1404 | ELSE |
|---|
| 1405 | |
|---|
| 1406 | ! The number of pfts on the map is identical |
|---|
| 1407 | ! to the number of PFTs used in the simulation |
|---|
| 1408 | fm_change_map(:,:)=fm_map_temp(:,:) |
|---|
| 1409 | |
|---|
| 1410 | ENDIF |
|---|
| 1411 | |
|---|
| 1412 | DEALLOCATE(fm_map_temp) |
|---|
| 1413 | |
|---|
| 1414 | ELSE |
|---|
| 1415 | |
|---|
| 1416 | IF(printlev_loc>=4) WRITE(numout,*) 'fm change map NOT read' |
|---|
| 1417 | IF(printlev_loc>=4) WRITE(numout,*) 'fm_change_force, ',fm_change_force |
|---|
| 1418 | IF(fm_change_force .EQ. -9999) THEN |
|---|
| 1419 | |
|---|
| 1420 | ! If we end-up here the user has set-up the model |
|---|
| 1421 | ! such that we use the species_change code but only |
|---|
| 1422 | ! to change the species while keeping the management |
|---|
| 1423 | ! constant. To keep the code simple we will use a |
|---|
| 1424 | ! dummy fm_change_map |
|---|
| 1425 | IF(printlev_loc>=4) WRITE(numout,*) 'Use forest_managed instead' |
|---|
| 1426 | fm_change_map(:,:)=forest_managed(:,:) |
|---|
| 1427 | |
|---|
| 1428 | ELSE |
|---|
| 1429 | |
|---|
| 1430 | ! Use a single value (::species_change_force) instead |
|---|
| 1431 | ! of the information from a map. This was implemented |
|---|
| 1432 | ! as a feature for testing and/or debugging. It allows |
|---|
| 1433 | ! to test on a single pixel without reading maps. |
|---|
| 1434 | IF(printlev_loc>=4) WRITE(numout,*) 'Use ::fm_change_force' |
|---|
| 1435 | fm_change_map(:,:)=fm_change_force |
|---|
| 1436 | |
|---|
| 1437 | ENDIF |
|---|
| 1438 | |
|---|
| 1439 | ENDIF |
|---|
| 1440 | |
|---|
| 1441 | ENDIF |
|---|
| 1442 | |
|---|
| 1443 | |
|---|
| 1444 | IF (reset_impose_cn) THEN |
|---|
| 1445 | DO ipts = 1,kjpindex |
|---|
| 1446 | circ_class_biomass(ipts,1,:,ileaf,initrogen) = circ_class_biomass(ipts,1,:,ileaf,icarbon) / & |
|---|
| 1447 | cn_leaf_init_2D(ipts,1) |
|---|
| 1448 | DO j=2,nvm |
|---|
| 1449 | circ_class_biomass(ipts,j,:,ileaf,initrogen) = circ_class_biomass(ipts,j,:,ileaf,icarbon) / & |
|---|
| 1450 | cn_leaf_init_2D(ipts,j) |
|---|
| 1451 | circ_class_biomass(ipts,j,:,iroot,initrogen) = circ_class_biomass(ipts,j,:,iroot,icarbon) / & |
|---|
| 1452 | cn_leaf_init_2D(ipts,j)*fcn_root(j) |
|---|
| 1453 | circ_class_biomass(ipts,j,:,ifruit,initrogen) = circ_class_biomass(ipts,j,:,ifruit,icarbon) / & |
|---|
| 1454 | cn_leaf_init_2D(ipts,j)*fcn_root(j) |
|---|
| 1455 | circ_class_biomass(ipts,j,:,isapabove,initrogen) = circ_class_biomass(ipts,j,:,isapabove,icarbon) / & |
|---|
| 1456 | cn_leaf_init_2D(ipts,j)*fcn_wood(j) |
|---|
| 1457 | circ_class_biomass(ipts,j,:,isapbelow,initrogen) = circ_class_biomass(ipts,j,:,isapbelow,icarbon) / & |
|---|
| 1458 | cn_leaf_init_2D(ipts,j)*fcn_wood(j) |
|---|
| 1459 | circ_class_biomass(ipts,j,:,iheartabove,initrogen) = circ_class_biomass(ipts,j,:,iheartabove,icarbon) / & |
|---|
| 1460 | cn_leaf_init_2D(ipts,j)*fcn_wood(j) |
|---|
| 1461 | circ_class_biomass(ipts,j,:,iheartbelow,initrogen) = circ_class_biomass(ipts,j,:,iheartbelow,icarbon) / & |
|---|
| 1462 | cn_leaf_init_2D(ipts,j)*fcn_wood(j) |
|---|
| 1463 | END DO |
|---|
| 1464 | END DO |
|---|
| 1465 | ENDIF |
|---|
| 1466 | |
|---|
| 1467 | !! 1.4.5 Check time step |
|---|
| 1468 | |
|---|
| 1469 | !! 1.4.5.1 Allow STOMATE's time step to change although this is dangerous |
|---|
| 1470 | IF (dt_days /= dt_days_read) THEN |
|---|
| 1471 | WRITE(numout,*) 'slow_processes: STOMATE time step changes:', & |
|---|
| 1472 | & dt_days_read,' -> ',dt_days |
|---|
| 1473 | ENDIF |
|---|
| 1474 | |
|---|
| 1475 | !! 1.4.5.2 Time step has to be a multiple of a full day |
|---|
| 1476 | IF ( ( dt_days-REAL(NINT(dt_days),r_std) ) > min_stomate ) THEN |
|---|
| 1477 | WRITE(numout,*) 'slow_processes: STOMATE time step is not a mutiple of a full day:', & |
|---|
| 1478 | & dt_days,' days.' |
|---|
| 1479 | STOP |
|---|
| 1480 | ENDIF |
|---|
| 1481 | |
|---|
| 1482 | !! 1.4.5.3 upper limit to STOMATE's time step |
|---|
| 1483 | IF ( dt_days > max_dt_days ) THEN |
|---|
| 1484 | WRITE(numout,*) 'slow_processes: STOMATE time step exceeds the maximum value:', & |
|---|
| 1485 | & dt_days,' days > ', max_dt_days, ' days.' |
|---|
| 1486 | STOP |
|---|
| 1487 | ENDIF |
|---|
| 1488 | |
|---|
| 1489 | !! 1.4.5.4 STOMATE time step must not be less than the forcing time step |
|---|
| 1490 | IF ( dt_sechiba > dt_days*one_day ) THEN |
|---|
| 1491 | WRITE(numout,*) & |
|---|
| 1492 | & 'slow_processes: STOMATE time step ::dt_days smaller than forcing time step ::dt_sechiba' |
|---|
| 1493 | STOP |
|---|
| 1494 | ENDIF |
|---|
| 1495 | |
|---|
| 1496 | !! 1.4.5.6 Final message on time step |
|---|
| 1497 | IF (printlev >=2) WRITE(numout,*) 'Slow_processes, STOMATE time step (days): ', dt_days |
|---|
| 1498 | |
|---|
| 1499 | |
|---|
| 1500 | ! 1.4.7b Write forcing file for the soil carbon discretization module |
|---|
| 1501 | ok_soil_carbon_discretization_write = .FALSE. |
|---|
| 1502 | ! |
|---|
| 1503 | IF ( ok_soil_carbon_discretization ) THEN |
|---|
| 1504 | |
|---|
| 1505 | !Config Key = STOMATE_CFORCING_NAME |
|---|
| 1506 | !Config Desc = Name of STOMATE's carbon forcing file or NONE. If NONE the file will not be written. |
|---|
| 1507 | !Config If = OK_SOIL_CARBON_DISCRETIZATION |
|---|
| 1508 | !Config Def = stomate_cforcing.nc |
|---|
| 1509 | !Config Help = Name that will be given to STOMATE's carbon soil discretization |
|---|
| 1510 | !Config offline forcing file |
|---|
| 1511 | Cforcing_discretization_name = 'stomate_cforcing.nc' |
|---|
| 1512 | CALL getin ('STOMATE_CFORCING_NAME', Cforcing_discretization_name) |
|---|
| 1513 | |
|---|
| 1514 | ! |
|---|
| 1515 | IF ( TRIM(Cforcing_discretization_name) /= 'NONE') THEN |
|---|
| 1516 | ok_soil_carbon_discretization_write = .TRUE. |
|---|
| 1517 | |
|---|
| 1518 | ! Time step of forcesoil |
|---|
| 1519 | !Config Key = FORCESOIL_STEP_PER_YEAR |
|---|
| 1520 | !Config Desc = Number of time steps per year for carbon spinup. |
|---|
| 1521 | !Config If = STOMATE_CFORCING_NAME and OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION |
|---|
| 1522 | !Config Def = 365 (366, ...) |
|---|
| 1523 | !Config Help = Number of time steps per year for carbon spinup. |
|---|
| 1524 | !Config Units = [days, months, year] |
|---|
| 1525 | nparan = 365 !year_length_in_days |
|---|
| 1526 | CALL getin_p('FORCESOIL_STEP_PER_YEAR', nparan) |
|---|
| 1527 | |
|---|
| 1528 | ! Correct if setting is out of bounds |
|---|
| 1529 | IF ( nparan < 1 ) THEN |
|---|
| 1530 | WRITE(temp_str, *) "Value found:", nparan |
|---|
| 1531 | CALL ipslerr_p(3, 'stomate_initialize', & |
|---|
| 1532 | 'Invalid value for FORCESOIL_STEP_PER_YEAR ', & |
|---|
| 1533 | 'Expected value is > 0', temp_str) |
|---|
| 1534 | ENDIF |
|---|
| 1535 | |
|---|
| 1536 | !Config Key = FORCESOIL_NB_YEAR |
|---|
| 1537 | !Config Desc = Number of years saved for carbon spinup. |
|---|
| 1538 | !Config If = STOMATE_CFORCING_NAME and OK_STOMATE |
|---|
| 1539 | !Config Def = 1 |
|---|
| 1540 | !Config Help = Number of years saved for carbon spinup. If internal parameter cumul_Cforcing is TRUE in stomate.f90 |
|---|
| 1541 | !Config Then this parameter is forced to one. |
|---|
| 1542 | !Config Units = [years] |
|---|
| 1543 | nbyear = 1 |
|---|
| 1544 | CALL getin_p('FORCESOIL_NB_YEAR', nbyear) |
|---|
| 1545 | |
|---|
| 1546 | ! Make use of ::nparan to calculate ::dt_forcesoil |
|---|
| 1547 | dt_forcesoil = zero |
|---|
| 1548 | nparan = nparan+1 |
|---|
| 1549 | DO WHILE ( dt_forcesoil < dt_stomate/one_day ) |
|---|
| 1550 | nparan = nparan-1 |
|---|
| 1551 | IF ( nparan < 1 ) THEN |
|---|
| 1552 | CALL ipslerr_p(3,'stomate_initialize','Problem with number of soil forcing time steps','nparan < 1','') |
|---|
| 1553 | ENDIF |
|---|
| 1554 | dt_forcesoil = one_year/REAL(nparan,r_std) |
|---|
| 1555 | ENDDO |
|---|
| 1556 | IF ( nparan > nparanmax ) THEN |
|---|
| 1557 | CALL ipslerr_p(3,'stomate_initialize','Problem with number of soil forcing time steps','nparan > nparanmax','') |
|---|
| 1558 | ENDIF |
|---|
| 1559 | WRITE(numout,*) 'Time step of soil forcing (d): ',dt_forcesoil |
|---|
| 1560 | |
|---|
| 1561 | IF (is_root_prc) CALL SYSTEM ('rm -f '//TRIM(Cforcing_discretization_name)) |
|---|
| 1562 | |
|---|
| 1563 | ALLOCATE( nforce(nparan*nbyear), stat=ier) |
|---|
| 1564 | IF (ier /= 0) CALL ipslerr_p(3, 'stomate_initialize', 'Problem allocating nforce', 'Error code=', ier) |
|---|
| 1565 | ALLOCATE(som_input_2pfcforcing(kjpindex,ncarb,nvm,nelements,nparan*nbyear)) |
|---|
| 1566 | ALLOCATE(pb_2pfcforcing(kjpindex,nparan*nbyear)) |
|---|
| 1567 | ALLOCATE(snow_2pfcforcing(kjpindex,nparan*nbyear)) |
|---|
| 1568 | ALLOCATE(tprof_2pfcforcing(kjpindex,ngrnd,nvm,nparan*nbyear)) |
|---|
| 1569 | ALLOCATE(fbact_2pfcforcing(kjpindex,ngrnd,nvm,nparan*nbyear)) |
|---|
| 1570 | ALLOCATE(hslong_2pfcforcing(kjpindex,ngrnd,nvm,nparan*nbyear)) |
|---|
| 1571 | ALLOCATE(veget_max_2pfcforcing(kjpindex,nvm,nparan*nbyear)) |
|---|
| 1572 | ALLOCATE(rprof_2pfcforcing(kjpindex,nvm,nparan*nbyear)) |
|---|
| 1573 | ALLOCATE(tsurf_2pfcforcing(kjpindex,nparan*nbyear)) |
|---|
| 1574 | ALLOCATE(snowdz_2pfcforcing(kjpindex,nsnow,nparan*nbyear)) |
|---|
| 1575 | ALLOCATE(snowrho_2pfcforcing(kjpindex,nsnow,nparan*nbyear)) |
|---|
| 1576 | ALLOCATE(CN_target_2pfcforcing(kjpindex,nvm,ncarb,nparan*nbyear)) |
|---|
| 1577 | ALLOCATE(n_mineralisation_2pfcforcing(kjpindex,nvm,nparan*nbyear)) |
|---|
| 1578 | nforce(:) = zero |
|---|
| 1579 | som_input_2pfcforcing(:,:,:,:,:) = zero |
|---|
| 1580 | pb_2pfcforcing(:,:) = zero |
|---|
| 1581 | snow_2pfcforcing(:,:) = zero |
|---|
| 1582 | tprof_2pfcforcing(:,:,:,:) = zero |
|---|
| 1583 | fbact_2pfcforcing(:,:,:,:) = zero |
|---|
| 1584 | hslong_2pfcforcing(:,:,:,:) = zero |
|---|
| 1585 | veget_max_2pfcforcing(:,:,:) = zero |
|---|
| 1586 | rprof_2pfcforcing(:,:,:) = zero |
|---|
| 1587 | tsurf_2pfcforcing(:,:) = zero |
|---|
| 1588 | snowdz_2pfcforcing(:,:,:) = zero |
|---|
| 1589 | snowrho_2pfcforcing(:,:,:) = zero |
|---|
| 1590 | CN_target_2pfcforcing(:,:,:,:) = zero |
|---|
| 1591 | n_mineralisation_2pfcforcing(:,:,:) = zero |
|---|
| 1592 | |
|---|
| 1593 | ENDIF ! TRIM(Cforcing_discretization_name) /= 'NONE' |
|---|
| 1594 | ENDIF ! ok_soil_carbon_discretization |
|---|
| 1595 | |
|---|
| 1596 | |
|---|
| 1597 | !! 1.4.9 Initialize non-zero variables |
|---|
| 1598 | CALL stomate_var_init & |
|---|
| 1599 | (kjpindex, veget_max, leaf_age, leaf_frac, & |
|---|
| 1600 | leaf_age_crit, dead_leaves, & |
|---|
| 1601 | veget, deadleaf_cover, assim_param, & |
|---|
| 1602 | circ_class_biomass, circ_class_n, sugar_load) |
|---|
| 1603 | |
|---|
| 1604 | l_error =.FALSE. |
|---|
| 1605 | ALLOCATE(circ_class_dist(ncirc),stat=ier) |
|---|
| 1606 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1607 | IF (l_error) THEN |
|---|
| 1608 | WRITE(numout,*) ' Memory allocation error for circ_class_dist. ' // & |
|---|
| 1609 | 'We need ncirc words = ',ncirc |
|---|
| 1610 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1611 | 'Memory allocation error for circ_class_dist','','') |
|---|
| 1612 | END IF |
|---|
| 1613 | |
|---|
| 1614 | !Config Key = CIRC_CLASS_DIST |
|---|
| 1615 | !Config Desc = Probability distribution of the circumference classes |
|---|
| 1616 | !Config if = OK_STOMATE |
|---|
| 1617 | !Config Def = 1 |
|---|
| 1618 | !Config Help = Each diameter class needs to be defined separately by the |
|---|
| 1619 | ! variable CIRC_CLASS_DIST_0000X, where X is the number of |
|---|
| 1620 | ! the diameter class. The smallest number presents the smallest |
|---|
| 1621 | ! diameter class. From literature it is known that a truncated |
|---|
| 1622 | ! exponential distribution is a good first guess: CIRC_CLASS_DIST_1=9 |
|---|
| 1623 | ! CIRC_CLASS_DIST_2=5 and CIRC_CLASS_DIST_3=1. This declaration |
|---|
| 1624 | ! implies that 9/15th of the trees will always be in the smallest |
|---|
| 1625 | ! diameter class, 5/15th will be in the medium class and 1 tree out |
|---|
| 1626 | ! of 15 will be in the largest diameter class. These ratios are kept |
|---|
| 1627 | ! throughout the simulations and the boundaries of the diameter classes |
|---|
| 1628 | ! are adjusted to respect this constraint. Consequently, an even-aged |
|---|
| 1629 | ! stand will be simulated with three diameter classes where the diameter |
|---|
| 1630 | ! of the first class may be, for example, 20.3 cm, the diameter of the |
|---|
| 1631 | ! second class 20.4 cm and the diameter of the third class 20.5 cm. The |
|---|
| 1632 | ! same code and set-up allows to simulate, in the same simulation, an |
|---|
| 1633 | ! uneven-aged stand for the same PFT but in a different pixel with, for |
|---|
| 1634 | ! example, the smallest diameter 7 cm, the medium diameter 25 cm and the |
|---|
| 1635 | ! largest diameter 45 cm. |
|---|
| 1636 | !Config Units = [-] |
|---|
| 1637 | circ_class_dist(:) = 9999 |
|---|
| 1638 | CALL getin_p('CIRC_CLASS_DIST',circ_class_dist) |
|---|
| 1639 | |
|---|
| 1640 | IF (ncirc.EQ.3 .AND. SUM(circ_class_dist).GT.9999) THEN |
|---|
| 1641 | |
|---|
| 1642 | ! This is the default case where we want to use 3 circ_classes |
|---|
| 1643 | ! with the default diameter distribution |
|---|
| 1644 | circ_class_dist(1) = 9 |
|---|
| 1645 | circ_class_dist(2) = 5 |
|---|
| 1646 | circ_class_dist(3) = 1 |
|---|
| 1647 | |
|---|
| 1648 | ELSEIF (ncirc.NE.1 .AND. SUM(circ_class_dist).GE.9999) THEN |
|---|
| 1649 | |
|---|
| 1650 | ! We have more than 1 circumference class so we need |
|---|
| 1651 | ! to specify a distrubition. This was not the case. Note that |
|---|
| 1652 | ! if we have just one circumference class the diameter distrubtion |
|---|
| 1653 | ! all trees will belong to this class and circ_class_dist can be |
|---|
| 1654 | ! 9999 as it will be normalized later in this subroutine. |
|---|
| 1655 | WRITE(numout,*) 'ncirc, circ_class_dist, ', ncirc, circ_class_dist(:) |
|---|
| 1656 | CALL ipslerr_p(3,'stomate.f90','Trying to initialize circ_class_dist',& |
|---|
| 1657 | 'The values of the variable look suspicuous',& |
|---|
| 1658 | 'Remember to prescribe the diamater distribution of the stand') |
|---|
| 1659 | |
|---|
| 1660 | END IF |
|---|
| 1661 | |
|---|
| 1662 | ! Now we normalize the distribution |
|---|
| 1663 | temp_total=SUM(circ_class_dist(:)) |
|---|
| 1664 | circ_class_dist(:)=circ_class_dist(:)/temp_total |
|---|
| 1665 | IF (printlev_loc.GT.4) WRITE(numout,*) 'Target distribution for renormalization: ', & |
|---|
| 1666 | circ_class_dist(:) |
|---|
| 1667 | |
|---|
| 1668 | l_error =.FALSE. |
|---|
| 1669 | ALLOCATE(qmd_init(nvm),stat=ier) |
|---|
| 1670 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1671 | IF (l_error) THEN |
|---|
| 1672 | WRITE(numout,*) ' Memory allocation error for qmd_init. ' // & |
|---|
| 1673 | 'We need nvm words = ',nvm |
|---|
| 1674 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1675 | 'Memory allocation error for qmd_init','','') |
|---|
| 1676 | END IF |
|---|
| 1677 | |
|---|
| 1678 | l_error =.FALSE. |
|---|
| 1679 | ALLOCATE(dia_init(nvm,ncirc),stat=ier) |
|---|
| 1680 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1681 | IF (l_error) THEN |
|---|
| 1682 | WRITE(numout,*) ' Memory allocation error for dia_init. ' // & |
|---|
| 1683 | 'We need nvm * ncirc words = ',nvm, ncirc |
|---|
| 1684 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1685 | 'Memory allocation error for dia_init','','') |
|---|
| 1686 | END IF |
|---|
| 1687 | |
|---|
| 1688 | ! Initial quadratic mean diameter of a newly planted PFT. The initial |
|---|
| 1689 | ! diameters are PFT dependent and are only deteremined by other |
|---|
| 1690 | ! parameters. Hence, they are calculated just once. |
|---|
| 1691 | DO ivm = 1,nvm |
|---|
| 1692 | IF (is_tree(ivm)) THEN |
|---|
| 1693 | ! Calculate average tree diameter. |
|---|
| 1694 | IF (ncirc .EQ. 1) THEN |
|---|
| 1695 | dia_init(ivm,1) = (dia_init_min(ivm)+ dia_init_max(ivm))/2 |
|---|
| 1696 | ELSE |
|---|
| 1697 | DO icir = 1,ncirc |
|---|
| 1698 | dia_init(ivm,icir) = dia_init_min(ivm) + & |
|---|
| 1699 | (icir-1) * (dia_init_max(ivm)- dia_init_min(ivm))/(ncirc-1) |
|---|
| 1700 | ENDDO |
|---|
| 1701 | ENDIF |
|---|
| 1702 | ! Calculate quadratic mean diameter (m) |
|---|
| 1703 | qmd_init(ivm) = SQRT(SUM(dia_init(ivm,:)**2*circ_class_dist(:)) / & |
|---|
| 1704 | SUM(circ_class_dist(:))) |
|---|
| 1705 | ELSE |
|---|
| 1706 | ! Set qmd_init to zero for grasses and crops |
|---|
| 1707 | qmd_init(ivm) = zero |
|---|
| 1708 | END IF |
|---|
| 1709 | END DO |
|---|
| 1710 | |
|---|
| 1711 | ALLOCATE(st_dist(ncirc),stat=ier) |
|---|
| 1712 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1713 | IF (l_error) THEN |
|---|
| 1714 | WRITE(numout,*) ' Memory allocation error for st_dist. ' // & |
|---|
| 1715 | 'We need ncirc words = ',ncirc |
|---|
| 1716 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1717 | ' Memory allocation error for st_dist.','','') |
|---|
| 1718 | END IF |
|---|
| 1719 | !Config Key = ST_DIST |
|---|
| 1720 | !Config Desc = The distribution for killing trees in self-thinning. |
|---|
| 1721 | !Config if = OK_STOMATE |
|---|
| 1722 | !Config Def = circ_class_dist |
|---|
| 1723 | !Config Help = During self-thinning, we need to decide which |
|---|
| 1724 | ! circumference classes to kill trees in. This |
|---|
| 1725 | ! is the distribution that tells us this. Notice |
|---|
| 1726 | ! that it is normalized after being read in. |
|---|
| 1727 | !Config Units = [-] |
|---|
| 1728 | st_dist(:)=circ_class_dist(:) |
|---|
| 1729 | CALL getin_p('ST_DIST',st_dist) |
|---|
| 1730 | |
|---|
| 1731 | ! Now we normalize the distribution |
|---|
| 1732 | temp_total=SUM(st_dist(:)) |
|---|
| 1733 | st_dist(:)=st_dist(:)/temp_total |
|---|
| 1734 | WRITE(numout,*) 'Target distribution for self-thinning: ',st_dist(:) |
|---|
| 1735 | |
|---|
| 1736 | ! Initialize temp_growth |
|---|
| 1737 | temp_growth(:)=t2m_month(:)-tp_00 |
|---|
| 1738 | |
|---|
| 1739 | !Config Key = FROZEN_RESPIRATION_FUNC |
|---|
| 1740 | !Config Desc = Method for soil decomposition function |
|---|
| 1741 | !Config If = OK_SOIL_CARBON_DISCRETIZATION |
|---|
| 1742 | !Config Def = 1 |
|---|
| 1743 | !Config Help = |
|---|
| 1744 | !Config Units = [1] |
|---|
| 1745 | frozen_respiration_func = 1 |
|---|
| 1746 | CALL getin_p('FROZEN_RESPIRATION_FUNC',frozen_respiration_func) |
|---|
| 1747 | IF (printlev >=2) WRITE(numout, *)' frozen soil respiration function: ', frozen_respiration_func |
|---|
| 1748 | |
|---|
| 1749 | END SUBROUTINE stomate_initialize |
|---|
| 1750 | |
|---|
| 1751 | |
|---|
| 1752 | !! ================================================================================================================================ |
|---|
| 1753 | !! SUBROUTINE : stomate_main |
|---|
| 1754 | !! |
|---|
| 1755 | !>\BRIEF Manages variable initialisation, reading and writing forcing |
|---|
| 1756 | !! files, aggregating data at stomate's time step (dt_stomate), aggregating data |
|---|
| 1757 | !! at longer time scale (i.e. for phenology) and uses these forcing to calculate |
|---|
| 1758 | !! CO2 fluxes (NPP and respirations) and C-pools (litter, soil, biomass, ...) |
|---|
| 1759 | !! |
|---|
| 1760 | !! DESCRIPTION : The subroutine manages |
|---|
| 1761 | !! divers tasks: |
|---|
| 1762 | !! (1) Initializing all variables of stomate (first call) |
|---|
| 1763 | !! (2) Reading and writing forcing data (last call) |
|---|
| 1764 | !! (3) Adding CO2 fluxes to the IPCC history files |
|---|
| 1765 | !! (4) Converting the time steps of variables to maintain consistency between |
|---|
| 1766 | !! sechiba and stomate |
|---|
| 1767 | !! (5) Use these variables to call stomate_lpj, maint_respiration, littercalc, |
|---|
| 1768 | !! som. The called subroutines handle: climate constraints |
|---|
| 1769 | !! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 1770 | !! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 1771 | !! all turnover processes, light competition, sapling establishment, lai, |
|---|
| 1772 | !! land cover change and litter and soil dynamics. |
|---|
| 1773 | !! (6) Use the spin-up method developed by Lardy (2011)(only if SPINUP_ANALYTIC |
|---|
| 1774 | !! is set to TRUE). |
|---|
| 1775 | !! |
|---|
| 1776 | !! RECENT CHANGE(S) : None |
|---|
| 1777 | !! |
|---|
| 1778 | !! MAIN OUTPUT VARIABLE(S): deadleaf_cover, assim_param, veget, |
|---|
| 1779 | !! veget_max, resp_maint, resp_hetero, resp_growth, |
|---|
| 1780 | !! co2_flux_out, fco2_lu_out, fco2_wh_out, fco2_ha_out. |
|---|
| 1781 | !! |
|---|
| 1782 | !! REFERENCES : |
|---|
| 1783 | !! - Lardy, R, et al., A new method to determine soil organic carbon equilibrium, |
|---|
| 1784 | !! Environmental Modelling & Software (2011), doi:10.1016|j.envsoft.2011.05.016 |
|---|
| 1785 | !! |
|---|
| 1786 | !! FLOWCHART : |
|---|
| 1787 | !! \latexonly |
|---|
| 1788 | !! \includegraphics[scale=0.5]{stomatemainflow.png} |
|---|
| 1789 | !! \endlatexonly |
|---|
| 1790 | !! \n |
|---|
| 1791 | !_ ================================================================================================================================ |
|---|
| 1792 | |
|---|
| 1793 | SUBROUTINE stomate_main & |
|---|
| 1794 | & (kjit, kjpij, kjpindex, njsc, & |
|---|
| 1795 | & index, lalo, neighbours, resolution, contfrac, frac_nobio, clay, & |
|---|
| 1796 | & silt, bulk, temp_air, temp_sol, stempdiag, & |
|---|
| 1797 | & vegstress, humrel, shumdiag, litterhumdiag, precip_rain, precip_snow, & |
|---|
| 1798 | & tmc_pft, drainage_pft, runoff_pft, swc_pft, gpp, deadleaf_cover, & |
|---|
| 1799 | & assim_param, qsintveg, & |
|---|
| 1800 | & frac_age, veget, veget_max, & |
|---|
| 1801 | & veget_max_new, loss_gain, frac_nobio_new, fraclut, & |
|---|
| 1802 | & rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 1803 | & co2_flux_out, fco2_lu_out, fco2_wh_out, fco2_ha_out, & |
|---|
| 1804 | & resp_maint,resp_hetero,resp_growth,temp_growth, & |
|---|
| 1805 | & soil_pH, pb, n_input, month, & |
|---|
| 1806 | & tdeep, hsdeep, snow, heat_Zimov, sfluxCH4_deep, sfluxCO2_deep, & |
|---|
| 1807 | & som_total, snowdz, snowrho, altmax, depth_organic_soil, cn_leaf_min_2D, cn_leaf_max_2D, cn_leaf_init_2D, & |
|---|
| 1808 | & circ_class_biomass, & |
|---|
| 1809 | & circ_class_n, lai_per_level, & |
|---|
| 1810 | & laieff_fit, laieff_isotrop, z_array_out, max_height_store, & |
|---|
| 1811 | & transpir, transpir_mod, transpir_supply, vir_transpir_supply, & |
|---|
| 1812 | & coszang,stressed, unstressed, & |
|---|
| 1813 | & u, v, mcs_hydrol, & |
|---|
| 1814 | & mcfc_hydrol, vessel_loss, root_profile, root_depth, us, & |
|---|
| 1815 | & Pgap_cumul) |
|---|
| 1816 | |
|---|
| 1817 | |
|---|
| 1818 | IMPLICIT NONE |
|---|
| 1819 | |
|---|
| 1820 | |
|---|
| 1821 | !! 0. Variable and parameter declaration |
|---|
| 1822 | |
|---|
| 1823 | !! 0.1 Input variables |
|---|
| 1824 | |
|---|
| 1825 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 1826 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 1827 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 1828 | INTEGER(i_std),DIMENSION(:), INTENT (in) :: njsc !! Index of the dominant soil textural class in the grid cell (1-nscm, unitless) |
|---|
| 1829 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 1830 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 1831 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 1832 | !! (unitless) |
|---|
| 1833 | INTEGER(i_std),DIMENSION(:),INTENT(in) :: index !! Indices of the pixels on the map. Stomate uses a |
|---|
| 1834 | !! reduced grid excluding oceans. ::index contains |
|---|
| 1835 | !! the indices of the terrestrial pixels only |
|---|
| 1836 | !! (unitless) |
|---|
| 1837 | INTEGER(i_std),DIMENSION(:,:),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM |
|---|
| 1838 | !! (unitless) |
|---|
| 1839 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) |
|---|
| 1840 | !! for pixels (degrees) |
|---|
| 1841 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of |
|---|
| 1842 | !! the gridbox |
|---|
| 1843 | REAL(r_std),DIMENSION (:), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 1844 | REAL(r_std),DIMENSION(:),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 1845 | REAL(r_std),DIMENSION(:),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 1846 | REAL(r_std),DIMENSION(:),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 1847 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: vegstress !! Relative soil moisture (0-1, unitless) |
|---|
| 1848 | REAL(r_std),DIMENSION(:,:),INTENT (inout) :: humrel !! Relative humidity - not used in stomate (needed in age_class_distr) |
|---|
| 1849 | REAL(r_std),DIMENSION(:),INTENT(in) :: temp_air !! Air temperature at first atmosperic model layer (K) |
|---|
| 1850 | REAL(r_std),DIMENSION(:),INTENT(in) :: temp_sol !! Surface temperature (K) |
|---|
| 1851 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: stempdiag !! Soil temperature (K) |
|---|
| 1852 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: shumdiag !! Relative soil moisture (0-1, unitless) |
|---|
| 1853 | REAL(r_std),DIMENSION(:),INTENT(in) :: litterhumdiag !! Litter humidity (0-1, unitless) |
|---|
| 1854 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: transpir !! transpiration @tex $(kg m^{-2} timestep^{-1})$ |
|---|
| 1855 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: transpir_mod !! transpir divided by veget_max |
|---|
| 1856 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: transpir_supply !! Supply of water for transpiration @tex $(mm dt^{-1})$ @endtex |
|---|
| 1857 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: vir_transpir_supply !! Virtual supply of water for transpiration to deal |
|---|
| 1858 | !! with water stress when PFT1 becomes vegetated in LCC |
|---|
| 1859 | !! @tex $(mm dt^{-1})$ @endtex |
|---|
| 1860 | REAL(r_std),DIMENSION(:),INTENT(in) :: precip_rain !! Rain precipitation |
|---|
| 1861 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1862 | REAL(r_std),DIMENSION(:),INTENT(in) :: precip_snow !! Snow precipitation |
|---|
| 1863 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1864 | REAL(r_std),DIMENSION(:),INTENT (in) :: u !! Lowest level wind speed in direction u (m/s) |
|---|
| 1865 | REAL(r_std),DIMENSION(:),INTENT (in) :: v !! Lowest level wind speed in direction v (m/s) |
|---|
| 1866 | REAL(r_std), DIMENSION (:,:), INTENT(in) :: tmc_pft !! Total soil water per PFT (mm/m2) |
|---|
| 1867 | REAL(r_std), DIMENSION (:,:), INTENT(in) :: drainage_pft !! Drainage per PFT (mm/m2) |
|---|
| 1868 | REAL(r_std), DIMENSION (:,:), INTENT(in) :: runoff_pft !! Runoff per PFT (mm/m2) |
|---|
| 1869 | REAL(r_std), DIMENSION (:,:), INTENT(in) :: swc_pft !! Relative Soil water content [tmcr:tmcs] per pft (-) |
|---|
| 1870 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: gpp !! GPP of total ground area |
|---|
| 1871 | !! @tex $(gC m^{-2} time step^{-1})$ @endtex |
|---|
| 1872 | !! Calculated in sechiba, account for vegetation |
|---|
| 1873 | !! cover and effective time step to obtain ::gpp_d |
|---|
| 1874 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: frac_nobio_new !! New fraction of nobio per gridcell |
|---|
| 1875 | REAL(r_std),DIMENSION(:),INTENT(in) :: soil_pH !! soil pH |
|---|
| 1876 | REAL(r_std),DIMENSION(:), INTENT(in) :: pb !! Air pressure (hPa) |
|---|
| 1877 | REAL(r_std),DIMENSION(:,:,:,:),INTENT(inout) :: n_input !! Nitrogen inputs into the soil (gN/m**2/timestep) |
|---|
| 1878 | REAL(r_std),DIMENSION(:,:), INTENT(in) :: cn_leaf_min_2D !! minimal leaf C/N ratio |
|---|
| 1879 | REAL(r_std),DIMENSION(:,:), INTENT(in) :: cn_leaf_max_2D !! maximal leaf C/N ratio |
|---|
| 1880 | REAL(r_std),DIMENSION(:,:), INTENT(in) :: cn_leaf_init_2D !! initial leaf C/N ratio |
|---|
| 1881 | REAL(r_std),DIMENSION(:), INTENT(in) :: mcs_hydrol !! Saturated volumetric water content output to be used in stomate_soilcarbon |
|---|
| 1882 | REAL(r_std),DIMENSION(:), INTENT(in) :: mcfc_hydrol !! Volumetric water content at field capacity output to be used in stomate_soilcarbon |
|---|
| 1883 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: fraclut !! Fraction of landuse tiles |
|---|
| 1884 | REAL(r_std),DIMENSION(:), INTENT(in) :: coszang !! the cosine of the zenith angle |
|---|
| 1885 | REAL(r_std), DIMENSION(:,:), INTENT(inout) :: loss_gain !! losses and gains due to LCC distributed over all |
|---|
| 1886 | !! age classes and thus taking the age-classes into |
|---|
| 1887 | !! account (unitless, 0-1) |
|---|
| 1888 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: veget_max_new !! New "maximal" coverage fraction of a PFT: only if |
|---|
| 1889 | !! vegetation is updated in slowproc |
|---|
| 1890 | ! Variables for soil carbon discretization |
|---|
| 1891 | REAL(r_std), DIMENSION(:,:), INTENT(in) :: snowdz !! snow depth [m] |
|---|
| 1892 | REAL(r_std), DIMENSION(:,:), INTENT(in) :: snowrho !! snow density (Kg/m^3) |
|---|
| 1893 | REAL(r_std), DIMENSION(:,:,:), INTENT (in) :: tdeep !! deep temperature profile (K) |
|---|
| 1894 | REAL(r_std), DIMENSION(:,:,:), INTENT (in) :: hsdeep !! deep long term soil humidity profile (unitless) |
|---|
| 1895 | REAL(r_std), DIMENSION(:,:,:), INTENT (out) :: heat_Zimov !! heating associated with decomposition [W/m**3 soil] |
|---|
| 1896 | REAL(r_std), DIMENSION(:), INTENT (out) :: sfluxCH4_deep !! surface flux of CH4 to atmosphere from soil |
|---|
| 1897 | REAL(r_std), DIMENSION(:), INTENT (out) :: sfluxCO2_deep !! surface flux of CO2 to atmosphere from soil |
|---|
| 1898 | REAL(r_std), DIMENSION(:), INTENT (in) :: snow !! Snow mass [Kg/m^2] |
|---|
| 1899 | REAL(r_std), DIMENSION(:,:,:,:), INTENT (inout) :: som_total !! total soil carbon for use in thermal calcs (g/m**3) |
|---|
| 1900 | REAL(r_std), DIMENSION(:,:),INTENT(inout) :: altmax !! Maximul active layer thickness (m). Be careful, here active means non frozen. |
|---|
| 1901 | !! Not related with the active soil carbon pool. |
|---|
| 1902 | REAL(r_std), DIMENSION(:), INTENT (inout) :: depth_organic_soil!! Depth at which there is still organic matter (m) |
|---|
| 1903 | REAL(r_std), DIMENSION(:,:), INTENT (in) :: vessel_loss !! Proportion of conductivity lost due to cavitation in the xylem (no unit). |
|---|
| 1904 | REAL(r_std), DIMENSION(:,:,:,:), INTENT(in) :: root_profile !! Normalized root mass/length fraction in each soil layer |
|---|
| 1905 | !! (0-1, unitless) |
|---|
| 1906 | REAL(r_std), DIMENSION (:,:,:), INTENT(in) :: root_depth !! Node and interface numbers at which the deepest roots |
|---|
| 1907 | !! occur (1 to nslm, unitless) |
|---|
| 1908 | INTEGER(i_std), INTENT(in) :: month !! month number required for n_input (1-12) |
|---|
| 1909 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: Pgap_cumul !! The probability of finding a gap in the |
|---|
| 1910 | !! in canopy from the top of the canopy |
|---|
| 1911 | !! to a given level. |
|---|
| 1912 | !! (unitless, between 0-1) |
|---|
| 1913 | |
|---|
| 1914 | |
|---|
| 1915 | !! 0.2 Output variables |
|---|
| 1916 | |
|---|
| 1917 | REAL(r_std),DIMENSION(:,:),INTENT(out) :: co2_flux_out !! CO2 flux between atmosphere and biosphere per |
|---|
| 1918 | !! average ground area |
|---|
| 1919 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 1920 | REAL(r_std),DIMENSION(:),INTENT(out) :: fco2_lu_out !! CO2 flux between atmosphere and biosphere from |
|---|
| 1921 | !! land-use (without forest management) (gC/m2/dt_stomate) |
|---|
| 1922 | REAL(r_std),DIMENSION(:),INTENT(out) :: fco2_wh_out !! CO2 Flux to Atmosphere from Wood Harvesting (gC/m2/dt_stomate) |
|---|
| 1923 | REAL(r_std),DIMENSION(:),INTENT(out) :: fco2_ha_out !! CO2 Flux to Atmosphere from Crop Harvesting (gC/m2/dt_stomate) |
|---|
| 1924 | REAL(r_std),DIMENSION(:,:),INTENT(out) :: resp_maint !! Maitenance component of autotrophic respiration in |
|---|
| 1925 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1926 | REAL(r_std),DIMENSION(:,:),INTENT(out) :: resp_growth !! Growth component of autotrophic respiration in |
|---|
| 1927 | !! @tex ($gC m^{-2} dt_stomate^{-1}$) @endtex |
|---|
| 1928 | REAL(r_std),DIMENSION(:,:),INTENT(out) :: resp_hetero !! Heterotrophic respiration in |
|---|
| 1929 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1930 | REAL(r_std),DIMENSION(:),INTENT(out) :: temp_growth !! Growth temperature (ðC) |
|---|
| 1931 | !! Is equal to t2m_month |
|---|
| 1932 | REAL(r_std),DIMENSION(:,:),INTENT(out) :: max_height_store !! ??? |
|---|
| 1933 | |
|---|
| 1934 | |
|---|
| 1935 | !! 0.3 Modified |
|---|
| 1936 | |
|---|
| 1937 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 1938 | !! non-biological fraction (unitless) |
|---|
| 1939 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 1940 | !! non-biological fraction (unitless) |
|---|
| 1941 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: assim_param !! vmax, nue and leaf N for photosynthesis |
|---|
| 1942 | !! @tex $(\mu mol m^{-2}s^{-1})$ @endtex |
|---|
| 1943 | REAL(r_std), DIMENSION(:,:), INTENT(inout) :: qsintveg !! Water on vegetation due to interception @tex $(kg m^{-2})$ @endtex |
|---|
| 1944 | REAL(r_std),DIMENSION(:),INTENT(inout) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 1945 | !! (unitless) |
|---|
| 1946 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: frac_age !! Age efficacity from STOMATE |
|---|
| 1947 | REAL(r_std), DIMENSION(:,:,:,:,:),INTENT(inout) :: circ_class_biomass!! Biomass per circumference class @tex $(gC tree^{-1})$ @endtex |
|---|
| 1948 | REAL(r_std), DIMENSION(:,:,:),INTENT(inout) :: circ_class_n !! Number of trees within each circumference |
|---|
| 1949 | !! Biomass per PFT |
|---|
| 1950 | REAL(r_std), DIMENSION(:,:,:), INTENT(inout) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 1951 | !! @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 1952 | TYPE(laieff_type),DIMENSION (:,:,:),INTENT(inout) :: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 1953 | REAL(r_std), DIMENSION(:,:,:), INTENT(inout) :: laieff_isotrop !! Effective LAI |
|---|
| 1954 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: stressed !! adjusted ecosystem functioning. Takes the unit of the variable |
|---|
| 1955 | !! used as a proxy for waterstress (assigned in sechiba). |
|---|
| 1956 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: unstressed !! initial ecosystem functioning after the first calculation and |
|---|
| 1957 | !! before any recalculations. Takes the unit of the variable used |
|---|
| 1958 | !! as a proxy for unstressed (assigned in sechiba). |
|---|
| 1959 | REAL(r_std),DIMENSION(:,:,:,:), INTENT(inout) :: z_array_out !! An output of h_array, to use in sechiba |
|---|
| 1960 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: frac_nobio !! Fraction of grid cell covered by lakes, land |
|---|
| 1961 | !! ice, cities, ... (unitless) |
|---|
| 1962 | REAL(r_std),DIMENSION(:,:,:,:), INTENT(inout) :: us !! Water stress index for transpiration |
|---|
| 1963 | !! (by soil layer and PFT) (0-1, unitless) |
|---|
| 1964 | |
|---|
| 1965 | !! 0.4 local variables |
|---|
| 1966 | |
|---|
| 1967 | CHARACTER(LEN=10), DIMENSION(nelements) :: element_str !! string suffix indicating element |
|---|
| 1968 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 1969 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 1970 | INTEGER(i_std) :: igrn !! indices |
|---|
| 1971 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 1972 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 1973 | REAL(r_std),DIMENSION(0:nslm) :: z_soil !! Variable to store depth of the different soil |
|---|
| 1974 | !! layers (m) |
|---|
| 1975 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 1976 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 1977 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 1978 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 1979 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1980 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 1981 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1982 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_litter !! Litter heterotrophic respiration per ground area |
|---|
| 1983 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1984 | !! ??Same variable is also used to |
|---|
| 1985 | !! store heterotrophic respiration per ground area |
|---|
| 1986 | !! over ::dt_sechiba?? |
|---|
| 1987 | REAL(r_std),DIMENSION(nvm) :: ld_redistribute !! logical set to redistribute som and litter |
|---|
| 1988 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_soil !! soil heterotrophic respiration |
|---|
| 1989 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1990 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 1991 | !! (0-1, unitless) |
|---|
| 1992 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 1993 | !! respiration, above and below (0-1, unitless) |
|---|
| 1994 | REAL(r_std),DIMENSION(kjpindex,ncarb,nvm,nelements) :: som_input_inst !! Quantity of carbon going into carbon pools from |
|---|
| 1995 | !! litter decomposition |
|---|
| 1996 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1997 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 1998 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time step |
|---|
| 1999 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 2000 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 2001 | REAL(r_std), DIMENSION(kjpindex,nvm) :: longevity_eff_root !! Effective root turnover time that accounts |
|---|
| 2002 | !! waterstress (days) |
|---|
| 2003 | REAL(r_std), DIMENSION(kjpindex,nvm) :: longevity_eff_sap !! Effective sapwood turnover time that accounts |
|---|
| 2004 | !! waterstress (days) |
|---|
| 2005 | REAL(r_std), DIMENSION(kjpindex,nvm) :: longevity_eff_leaf !! Effective leaf turnover time that accounts |
|---|
| 2006 | !! waterstress (days) |
|---|
| 2007 | REAL(r_std), DIMENSION(kjpindex,nvm) :: wstress_adapt !! Factor to account for a long acclimation of |
|---|
| 2008 | !! of the PFT to the long-term waterstress in |
|---|
| 2009 | !! the pixel |
|---|
| 2010 | REAL(r_std), DIMENSION(kjpindex,nvm,nionspec) :: leaching !! mineral nitrogen leached from the soil |
|---|
| 2011 | REAL(r_std), DIMENSION(kjpindex,nvm,nnspec) :: emission !! volatile losses of nitrogen (gN/m**2/timestep) |
|---|
| 2012 | REAL(r_std), DIMENSION(kjpindex,nvm,nmbcomp,nelements) & |
|---|
| 2013 | :: check_intern !! Contains the components of the internal |
|---|
| 2014 | !! mass balance chech for this routine |
|---|
| 2015 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 2016 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: closure_intern !! Check closure of internal mass balance |
|---|
| 2017 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 2018 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: pool_start !! Start and end pool of this routine |
|---|
| 2019 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 2020 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: pool_end !! Start and end pool of this routine |
|---|
| 2021 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 2022 | REAL(r_std), DIMENSION(kjpindex,nvm) :: veget_max_begin !! veget_max at the start of the routine. |
|---|
| 2023 | !! Used for consistency checks |
|---|
| 2024 | REAL(r_std), DIMENSION(kjpindex,nvm) :: nbp !! Pool-based Net Biome production for each |
|---|
| 2025 | !! time step |
|---|
| 2026 | INTEGER(i_std) :: inspec, ininput, inionspec !! Indices |
|---|
| 2027 | INTEGER(i_std) :: ipts, ivm, ilitt, ilev, icir !! Indices |
|---|
| 2028 | INTEGER(i_std) :: icarb, ipar, iele, imbc !! Indices |
|---|
| 2029 | REAL(r_std),DIMENSION(kjpindex,nvm) :: count_daylight !! Time steps dt_radia during daylight |
|---|
| 2030 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 2031 | !! used by ORCHIDEE |
|---|
| 2032 | REAL(r_std), DIMENSION(kjpindex,nvm) :: n_mineralisation !! net nitrogen mineralisation of decomposing SOM |
|---|
| 2033 | !! (gN/m**2/day), supposed to be NH4 |
|---|
| 2034 | REAL(r_std), DIMENSION(kjpindex,nvm,nionspec) :: plant_n_uptake !! Uptake of soil N by plants |
|---|
| 2035 | !! (gN/m**2/timestep) |
|---|
| 2036 | REAL(r_std), DIMENSION(kjpindex,nvm) :: n_fungivores !! Fraction of N released for plant uptake due to |
|---|
| 2037 | !! fungivore consumption. |
|---|
| 2038 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_total_soil !! soil heterotrophic respiration (gC/day/m**2 by PFT) |
|---|
| 2039 | REAL(r_std), DIMENSION(kjpindex,nvm,ncarb) :: CN_target !! C to N ratio of SOM flux from one pool to another (gN m-2 dt-1) |
|---|
| 2040 | REAL(r_std) :: weight_spinup !! How do we account for spinup computation (0-1) |
|---|
| 2041 | LOGICAL :: partial_spinup !! in order to spinup only slow and passive pools |
|---|
| 2042 | LOGICAL :: nitrogen_spinup !! in order to spinup only carbon pools |
|---|
| 2043 | REAL(r_std), DIMENSION(kjpindex,ngrnd,nvm) :: tdeep_celsius !! deep temperature profile celsius (C) |
|---|
| 2044 | REAL(r_std), DIMENSION(kjpindex) :: tsoil_decomp !! Temperature used for decompostition in soil (K) |
|---|
| 2045 | REAL(r_std), DIMENSION(kjpindex) :: wind_speed_actual !! Actualwind speed calculated from the actual half hourly |
|---|
| 2046 | !! values u and v as given in the driver (ms-1) |
|---|
| 2047 | REAL(r_std), DIMENSION(ngrnd) :: zi_soil !! depths of intermediate soil levels (m) |
|---|
| 2048 | REAL(r_std), DIMENSION(0:ngrnd) :: zf_soil !! depths of full soil levels (m) |
|---|
| 2049 | REAL(r_std), DIMENSION(kjpindex,nvm) :: tmp !! dummy variable to calculate xios output |
|---|
| 2050 | REAL(r_std), DIMENSION(kjpindex,nvm,ncirc) :: tmp2 !! dummy variable to calculate xios output |
|---|
| 2051 | REAL(r_std), DIMENSION(kjpindex,nvm) :: vl_diff_daily !! Difference in conductivity lost since the day before. |
|---|
| 2052 | REAL(r_std), DIMENSION(kjpindex,nvm) :: vessel_mortality_daily !! Proportion of daily vessel mortality due to cavitation in the xylem. |
|---|
| 2053 | !_ ================================================================================================================================ |
|---|
| 2054 | |
|---|
| 2055 | !! 1. Initialize variables |
|---|
| 2056 | |
|---|
| 2057 | !! 1.1 Store current time step in a common variable |
|---|
| 2058 | itime = kjit |
|---|
| 2059 | |
|---|
| 2060 | !! 1.4 Initialize first call |
|---|
| 2061 | ! Set growth respiration to zero |
|---|
| 2062 | resp_growth(:,:) = zero |
|---|
| 2063 | resp_maint(:,:) = zero |
|---|
| 2064 | resp_hetero(:,:) = zero |
|---|
| 2065 | atm_to_bm(:,:,:) = zero |
|---|
| 2066 | plant_n_uptake(:,:,:) = zero |
|---|
| 2067 | n_mineralisation(:,:) = zero |
|---|
| 2068 | |
|---|
| 2069 | ! Check that initialization is done |
|---|
| 2070 | IF (l_first_stomate) CALL ipslerr_p(3,'stomate_main','Initialization not yet done.','','') |
|---|
| 2071 | |
|---|
| 2072 | IF (printlev >= 4) THEN |
|---|
| 2073 | WRITE(numout,*) 'stomate_main: date=',days_since_beg, & |
|---|
| 2074 | ' ymds=', year_end, month_end, day_end, sec_end, & |
|---|
| 2075 | ' itime=', itime, ' do_slow=',do_slow |
|---|
| 2076 | ENDIF |
|---|
| 2077 | |
|---|
| 2078 | !! 3. Special treatment for some input arrays. |
|---|
| 2079 | |
|---|
| 2080 | !! 3.1 Sum of liquid and solid precipitation |
|---|
| 2081 | precip(:) = ( precip_rain(:) + precip_snow(:) )*one_day/dt_sechiba |
|---|
| 2082 | |
|---|
| 2083 | !! 3.3 Adjust time step of GPP |
|---|
| 2084 | ! No GPP for bare soil |
|---|
| 2085 | gpp_d(:,1) = zero |
|---|
| 2086 | ! GPP per PFT |
|---|
| 2087 | DO j = 2,nvm |
|---|
| 2088 | WHERE (veget_max(:,j) > min_stomate) |
|---|
| 2089 | ! The PFT is available on the pixel |
|---|
| 2090 | gpp_d(:,j) = gpp(:,j)/ veget_max(:,j)* one_day/dt_sechiba |
|---|
| 2091 | ELSEWHERE |
|---|
| 2092 | ! The PFT is absent on the pixel |
|---|
| 2093 | gpp_d(:,j) = zero |
|---|
| 2094 | ENDWHERE |
|---|
| 2095 | ENDDO |
|---|
| 2096 | |
|---|
| 2097 | !! 4. Calculate variables for dt_stomate (i.e. "daily") |
|---|
| 2098 | |
|---|
| 2099 | ! Note: If dt_days /= 1, then variables 'xx_daily' (eg. half-daily or bi-daily) are by definition |
|---|
| 2100 | ! not expressed on a daily basis. This is not a problem but could be |
|---|
| 2101 | ! confusing |
|---|
| 2102 | |
|---|
| 2103 | !! 4.1. Calculate water stress accounting for hydraulic architecture |
|---|
| 2104 | ! If hydraulic architecture is used, vegstress_day (water stress) for use in stomate is |
|---|
| 2105 | ! not determined from vegstress as calculated in hydrol.f90, but it is calculated as the |
|---|
| 2106 | ! ratio between a proxy for stressed and unstressed ecosystem functioning. |
|---|
| 2107 | ! Nightvalues are exclude. On the first day of the simulation (no biomass) |
|---|
| 2108 | ! the stressed and unstressed proxies are probably both equal to the initilazed value (=zero, |
|---|
| 2109 | ! initialized in sechiba.f90), to avoid numerical issues in this case we set vegstress_day |
|---|
| 2110 | ! to 1. If hydraulic architecture is not used vegstress_day is calculated from vegstress as |
|---|
| 2111 | ! determined in hydrol. |
|---|
| 2112 | IF (ok_hydrol_arch) THEN |
|---|
| 2113 | |
|---|
| 2114 | IF (ok_vessel_mortality) THEN |
|---|
| 2115 | |
|---|
| 2116 | ! Initialize values. |
|---|
| 2117 | vl_diff_daily(:,:) = zero |
|---|
| 2118 | vessel_mortality_daily(:,:) = zero |
|---|
| 2119 | |
|---|
| 2120 | ! Accumulates half hourly values of vessel_loss into daily values. |
|---|
| 2121 | DO ipts = 1,kjpindex |
|---|
| 2122 | |
|---|
| 2123 | DO ivm = 1,nvm |
|---|
| 2124 | |
|---|
| 2125 | IF (veget_max(ipts,ivm) .LE. min_stomate) THEN |
|---|
| 2126 | |
|---|
| 2127 | ! Where there is no vegetation on the tile, PLC is zero. |
|---|
| 2128 | vessel_loss_daily(ipts,ivm) = zero |
|---|
| 2129 | |
|---|
| 2130 | ELSE ! IF (vessel_loss(ipts,ivm) .GT. vessel_loss_daily(ipts,ivm)) THEN |
|---|
| 2131 | |
|---|
| 2132 | ! Where there is vegetation, vessel_loss_daily is updated to take |
|---|
| 2133 | ! the maximum daily value of vessel_loss. |
|---|
| 2134 | vessel_loss_daily(ipts,ivm) = MAX(vessel_loss(ipts,ivm), & |
|---|
| 2135 | vessel_loss_daily(ipts,ivm)) |
|---|
| 2136 | |
|---|
| 2137 | ENDIF |
|---|
| 2138 | |
|---|
| 2139 | END DO |
|---|
| 2140 | |
|---|
| 2141 | END DO |
|---|
| 2142 | |
|---|
| 2143 | ELSE |
|---|
| 2144 | |
|---|
| 2145 | ! When ok_vessel_loss is not used it still need |
|---|
| 2146 | ! values to keep xios happy |
|---|
| 2147 | biomass_init_drought(:,:,:,:,:) = zero |
|---|
| 2148 | kill_vessels(:,:) = .FALSE. |
|---|
| 2149 | vessel_loss_previous(:,:) = zero |
|---|
| 2150 | vessel_loss_daily(:,:) = zero |
|---|
| 2151 | vl_diff_daily(:,:) = zero |
|---|
| 2152 | vessel_mortality_daily(:,:) = zero |
|---|
| 2153 | |
|---|
| 2154 | END IF |
|---|
| 2155 | |
|---|
| 2156 | ! Accumulate the half hourly values into a daily value. Accumulate the |
|---|
| 2157 | ! stressed and unstressed proxy first and then take the average. We |
|---|
| 2158 | ! first accumulate and then take the ratio because that way we better |
|---|
| 2159 | ! account for the night time values. If we do it in the other order |
|---|
| 2160 | ! we need to assign a value to the ratio during the night. Whether we |
|---|
| 2161 | ! take zero or one, this will bias our waterstress number because |
|---|
| 2162 | ! the number of half hours during the night is different for the |
|---|
| 2163 | ! different pixels. So although water stress could be higher in the |
|---|
| 2164 | ! south than in the north. During the growing season, day are shorter |
|---|
| 2165 | ! in the south so if we set the ratio to 1 during the night, our daily |
|---|
| 2166 | ! water stress in the south may be less than in the north because we |
|---|
| 2167 | ! more 1's in the daily time series. |
|---|
| 2168 | |
|---|
| 2169 | ! The order of the calculation may depend on the proxy used. For example, |
|---|
| 2170 | ! Accumulate transpir_supply and transpir first and then calculate ratio |
|---|
| 2171 | ! By doing this water stress is buffered (it is assumed that if |
|---|
| 2172 | ! ::transpir_supply is larger than ::transpir at one timestep it can buffer |
|---|
| 2173 | ! potential water stress in the next timestep. In reality this is not the |
|---|
| 2174 | ! case: transpir_supply is a potential value not a realized one. |
|---|
| 2175 | DO ipts = 1,kjpindex |
|---|
| 2176 | |
|---|
| 2177 | ! The cosine of the zenith angle, is used to |
|---|
| 2178 | ! identify night values. |
|---|
| 2179 | IF (coszang(ipts) .LT. min_stomate) THEN |
|---|
| 2180 | |
|---|
| 2181 | ! Redundant because the value will never be used |
|---|
| 2182 | ! For all pixels |
|---|
| 2183 | stressed(ipts,:) = zero |
|---|
| 2184 | unstressed(ipts,:) = zero |
|---|
| 2185 | |
|---|
| 2186 | ! For PFT1 under LCC |
|---|
| 2187 | ! vir_stressed = zero |
|---|
| 2188 | ! vir_unstressed = zero |
|---|
| 2189 | |
|---|
| 2190 | ELSE |
|---|
| 2191 | |
|---|
| 2192 | ! No vegetation present so ecosystem functioning |
|---|
| 2193 | ! was not defined |
|---|
| 2194 | WHERE (veget_max(ipts,:) .LT. min_stomate) |
|---|
| 2195 | |
|---|
| 2196 | ! To avoid uninitialized values |
|---|
| 2197 | stressed(ipts,:) = zero |
|---|
| 2198 | unstressed(ipts,:) = zero |
|---|
| 2199 | |
|---|
| 2200 | ! Update the values to avoid uninitialized fields |
|---|
| 2201 | ! in ::stressed_daily and ::unstressed_daily |
|---|
| 2202 | stressed_daily(ipts,:) = stressed_daily(ipts,:) + & |
|---|
| 2203 | stressed(ipts,:) |
|---|
| 2204 | unstressed_daily(ipts,:) = unstressed_daily(ipts,:) + & |
|---|
| 2205 | unstressed(ipts,:) |
|---|
| 2206 | |
|---|
| 2207 | ! For PFT1 under LCC |
|---|
| 2208 | ! vir_stressed = zero |
|---|
| 2209 | ! vir_unstressed = zero |
|---|
| 2210 | |
|---|
| 2211 | ELSEWHERE |
|---|
| 2212 | |
|---|
| 2213 | ! The pixel and pft contain vegetation to calculate the stress |
|---|
| 2214 | stressed_daily(ipts,:) = stressed_daily(ipts,:) + & |
|---|
| 2215 | stressed(ipts,:) |
|---|
| 2216 | unstressed_daily(ipts,:) = unstressed_daily(ipts,:) + & |
|---|
| 2217 | unstressed(ipts,:) |
|---|
| 2218 | |
|---|
| 2219 | ! For PFT1 under LCC |
|---|
| 2220 | ! vir_stressed = zero |
|---|
| 2221 | ! vir_unstressed = zero |
|---|
| 2222 | |
|---|
| 2223 | ENDWHERE |
|---|
| 2224 | |
|---|
| 2225 | ENDIF |
|---|
| 2226 | |
|---|
| 2227 | ENDDO |
|---|
| 2228 | |
|---|
| 2229 | ! Calculate values at the end of the day |
|---|
| 2230 | IF (do_slow) THEN |
|---|
| 2231 | |
|---|
| 2232 | ! Calculates difference between current embolism and that of the |
|---|
| 2233 | ! day before in the variable vl_diff_daily. The current embolism is |
|---|
| 2234 | ! stored in vessel_loss_daily. The embolism of the day before is |
|---|
| 2235 | ! stored in vessel_loss_previous. |
|---|
| 2236 | vl_diff_daily(:,:) = vessel_loss_daily(:,:) - vessel_loss_previous(:,:) |
|---|
| 2237 | |
|---|
| 2238 | ! There are three scenarios regarding whether effect of embolism on |
|---|
| 2239 | ! turnover should be accounted for, and what the value of vessel |
|---|
| 2240 | ! mortality should be. Turnover from sapwood to heartwood is |
|---|
| 2241 | ! calculated in the MODULE stomate_turnover.f90. |
|---|
| 2242 | WHERE (vl_diff_daily(:,:) .GT. min_stomate) |
|---|
| 2243 | |
|---|
| 2244 | ! First scenario: embolism is increasing, so vl_diff_daily |
|---|
| 2245 | ! is positive. This means drought is ongoing. Effect of embolism on |
|---|
| 2246 | ! turnover should be accounted for, therefore kill_vessels is set |
|---|
| 2247 | ! to .TRUE. and vl_diff_daily are the vessels that started |
|---|
| 2248 | ! malfunctioning in the current time step. |
|---|
| 2249 | kill_vessels = .TRUE. |
|---|
| 2250 | |
|---|
| 2251 | ! Vessel mortality is calculated as a fraction of embolism |
|---|
| 2252 | ! because some embolized vessels may not die instantly, and |
|---|
| 2253 | ! might eventually recover. |
|---|
| 2254 | vessel_mortality_daily(:,:) = vl_diff_daily(:,:) |
|---|
| 2255 | |
|---|
| 2256 | ELSEWHERE (ABS(vl_diff_daily(:,:)) .LT. min_stomate .AND. & |
|---|
| 2257 | vessel_loss_daily(:,:) .GT. zero) |
|---|
| 2258 | |
|---|
| 2259 | ! Second scenario: embolism is stagnating or decreasing |
|---|
| 2260 | ! vl_diff_daily is null, but vessel_loss_daily is |
|---|
| 2261 | ! positive. This means drought is ongoing. Some of the already |
|---|
| 2262 | ! embolized vessels might die. Effect of embolism on turnover |
|---|
| 2263 | ! should be accounted for, therefore kill_vessels is set to .TRUE. |
|---|
| 2264 | kill_vessels(:,:) = .TRUE. |
|---|
| 2265 | |
|---|
| 2266 | ! Vessel mortality is calculated as a fraction of total |
|---|
| 2267 | ! embolism to get a mortality value different from zero. |
|---|
| 2268 | vessel_mortality_daily(:,:) = & |
|---|
| 2269 | 0.01 * vessel_loss_daily(:,:) |
|---|
| 2270 | |
|---|
| 2271 | ELSEWHERE |
|---|
| 2272 | |
|---|
| 2273 | ! Third scenario: embolism is decreasing, which means drought |
|---|
| 2274 | ! is ending, or embolism is stagnating, and vessel_loss_daily |
|---|
| 2275 | ! is null, which means there is no drought. There is no effect |
|---|
| 2276 | ! of embolism on turnover, therefore kill_vessels is set to |
|---|
| 2277 | ! .FALSE. |
|---|
| 2278 | kill_vessels(:,:) = .FALSE. |
|---|
| 2279 | vessel_mortality_daily(:,:) = zero |
|---|
| 2280 | |
|---|
| 2281 | END WHERE |
|---|
| 2282 | |
|---|
| 2283 | ! Calculate the biomass as the start of a drought |
|---|
| 2284 | DO ipts=1,kjpindex |
|---|
| 2285 | DO ivm=1,nvm |
|---|
| 2286 | |
|---|
| 2287 | IF (.NOT.kill_vessels(ipts,ivm)) THEN |
|---|
| 2288 | |
|---|
| 2289 | ! Calculate the biomass as the start of a drought. This is the |
|---|
| 2290 | ! Reference biomass for heartwood and sapwood. This variable |
|---|
| 2291 | ! is used to avoid overestimating the sapwood mortality |
|---|
| 2292 | ! since ::vessel_mortality_daily(:,ivm) is calculated as a |
|---|
| 2293 | ! proportion of the model tree sapwood. Reference biomass is |
|---|
| 2294 | ! recalculated whenever ::kill_vessels(:,ivm) is FALSE, that |
|---|
| 2295 | ! is to say inbetween droughts. |
|---|
| 2296 | biomass_init_drought(ipts,ivm,:,:,:) = & |
|---|
| 2297 | circ_class_biomass(ipts,ivm,:,:,:) |
|---|
| 2298 | |
|---|
| 2299 | ELSEIF ( SUM(SUM(SUM((biomass_init_drought(ipts,ivm,:,:,:) + & |
|---|
| 2300 | biomass_init_drought(ipts,ivm,:,:,:)),1),1)).EQ. zero) THEN |
|---|
| 2301 | |
|---|
| 2302 | ! Calculate the reference biomass also at the start of a simulation |
|---|
| 2303 | ! We also calculate it when total sapwood biomass is zero so |
|---|
| 2304 | ! that it already has a value on the first day of simulation. |
|---|
| 2305 | biomass_init_drought(ipts,ivm,:,:,:) = & |
|---|
| 2306 | circ_class_biomass(ipts,ivm,:,:,:) |
|---|
| 2307 | |
|---|
| 2308 | END IF |
|---|
| 2309 | |
|---|
| 2310 | END DO |
|---|
| 2311 | END DO |
|---|
| 2312 | |
|---|
| 2313 | ! Calculate the mean waterstress value at the end of each day |
|---|
| 2314 | WHERE (unstressed_daily(:,:) .LT. min_stomate & |
|---|
| 2315 | .OR. stressed_daily(:,:) .LT. min_stomate) |
|---|
| 2316 | |
|---|
| 2317 | ! No ecosystem function thus no data, we assume |
|---|
| 2318 | ! there is no water stress |
|---|
| 2319 | vegstress_day(:,:) = un |
|---|
| 2320 | |
|---|
| 2321 | ELSEWHERE |
|---|
| 2322 | |
|---|
| 2323 | ! Calculate water stress. If we first calculate |
|---|
| 2324 | ! the daily sum and then the ratio there is no need |
|---|
| 2325 | ! to divide by daylight. If we accumulate ratios |
|---|
| 2326 | ! we will have to divide by daylight. This is |
|---|
| 2327 | ! arbitrary. To do this properly we should calculate |
|---|
| 2328 | ! the turgor in the cells and calculate growth |
|---|
| 2329 | ! based on that see i.e. Fatichi et al 2013, New |
|---|
| 2330 | ! Phytologist. We use a simple numerical construct |
|---|
| 2331 | ! (the sqrt of the ratio) to overcome that complexity. |
|---|
| 2332 | vegstress_day(:,:) = stressed_daily(:,:) / & |
|---|
| 2333 | unstressed_daily(:,:) |
|---|
| 2334 | |
|---|
| 2335 | ENDWHERE |
|---|
| 2336 | |
|---|
| 2337 | !---TEMP--- |
|---|
| 2338 | IF(printlev_loc>=4)THEN |
|---|
| 2339 | DO ipts=1,kjpindex |
|---|
| 2340 | DO ivm=1,nvm |
|---|
| 2341 | IF( vegstress_day(ipts,ivm) .lt. 1.) THEN |
|---|
| 2342 | WRITE(numout,*)'ivm,stressed_daily,unstressed_daily,diff,vegstress_day' |
|---|
| 2343 | |
|---|
| 2344 | WRITE(numout,*) ivm, stressed_daily(ipts,ivm),unstressed_daily(ipts,ivm),& |
|---|
| 2345 | & stressed_daily(ipts,ivm)-unstressed_daily(ipts,ivm), vegstress_day(ipts,ivm) |
|---|
| 2346 | ENDIF |
|---|
| 2347 | ENDDO |
|---|
| 2348 | ENDDO |
|---|
| 2349 | ENDIF |
|---|
| 2350 | !---------- |
|---|
| 2351 | |
|---|
| 2352 | ! Set to zero to start accumulating for the next day |
|---|
| 2353 | stressed_daily(:,:) = zero |
|---|
| 2354 | unstressed_daily(:,:) = zero |
|---|
| 2355 | |
|---|
| 2356 | ELSE |
|---|
| 2357 | |
|---|
| 2358 | ! Set to a large value so that it is easy to detect problems |
|---|
| 2359 | ! This value should never be used. It should only be passed |
|---|
| 2360 | ! to other routine at the end of the day when do_slow is false |
|---|
| 2361 | vegstress_day(:,:) = large_value |
|---|
| 2362 | |
|---|
| 2363 | ENDIF !(do_slow) |
|---|
| 2364 | |
|---|
| 2365 | ELSE |
|---|
| 2366 | |
|---|
| 2367 | ! No hydrological architecture |
|---|
| 2368 | CALL stomate_accu (do_slow, vegstress, vegstress_day) |
|---|
| 2369 | |
|---|
| 2370 | ! When hydraulic architecture is not used, ok_vessel_loss |
|---|
| 2371 | ! cannot be used either so give its key variables values |
|---|
| 2372 | ! to keep xios and other parts of the code happy |
|---|
| 2373 | biomass_init_drought(:,:,:,:,:) = zero |
|---|
| 2374 | kill_vessels(:,:) = .FALSE. |
|---|
| 2375 | vessel_loss_previous(:,:) = zero |
|---|
| 2376 | vessel_loss_daily(:,:) = zero |
|---|
| 2377 | vl_diff_daily(:,:) = zero |
|---|
| 2378 | vessel_mortality_daily(:,:) = zero |
|---|
| 2379 | |
|---|
| 2380 | ENDIF ! (ok_hydrol_arch) |
|---|
| 2381 | |
|---|
| 2382 | IF (do_slow) THEN |
|---|
| 2383 | ! Set to zero to start accumulating for the next day |
|---|
| 2384 | daylight(:,:) = zero |
|---|
| 2385 | ELSE |
|---|
| 2386 | DO ipts = 1,kjpindex |
|---|
| 2387 | IF (coszang(ipts) .GE. min_stomate) THEN |
|---|
| 2388 | daylight(ipts,:) = daylight(ipts,:) + 1 |
|---|
| 2389 | ENDIF |
|---|
| 2390 | ENDDO |
|---|
| 2391 | ENDIF |
|---|
| 2392 | |
|---|
| 2393 | IF (do_slow) THEN |
|---|
| 2394 | |
|---|
| 2395 | ! Biomass drought is a diagnostic variable to check whether all goes |
|---|
| 2396 | ! well. Its values were aggregated to keep the output simple. Vessel_loss |
|---|
| 2397 | ! is written to xios un hydraulic_architecture where it is calculated. |
|---|
| 2398 | CALL xios_orchidee_send_field("SAP_INIT_DROUGHT_c", & |
|---|
| 2399 | biomass_init_drought(:,:,:,isapabove,icarbon) + & |
|---|
| 2400 | biomass_init_drought(:,:,:,isapbelow,icarbon)) |
|---|
| 2401 | tmp(:,:) = zero |
|---|
| 2402 | WHERE(kill_vessels(:,:)) |
|---|
| 2403 | tmp = un |
|---|
| 2404 | ENDWHERE |
|---|
| 2405 | CALL xios_orchidee_send_field("KILL_VESSELS",tmp(:,:)) |
|---|
| 2406 | CALL xios_orchidee_send_field("VESSEL_LOSS_PREVIOUS",vessel_loss_previous(:,:)) |
|---|
| 2407 | CALL xios_orchidee_send_field("VESSEL_LOSS_DAILY",vessel_loss_daily(:,:)) |
|---|
| 2408 | CALL xios_orchidee_send_field("VL_DIFF_DAILY",vl_diff_daily(:,:)) |
|---|
| 2409 | CALL xios_orchidee_send_field("VESSEL_MORTALITY_DAILY",vessel_mortality_daily(:,:)) |
|---|
| 2410 | |
|---|
| 2411 | ! At the end of the day, vessel_loss_previous takes the value of |
|---|
| 2412 | ! vessel_loss_daily, before vessel_loss_daily is recalculated, the |
|---|
| 2413 | ! next day. |
|---|
| 2414 | vessel_loss_previous(:,:) = vessel_loss_daily(:,:) |
|---|
| 2415 | |
|---|
| 2416 | ! Set to zero to start accumulating again at the beginning of the |
|---|
| 2417 | ! next day |
|---|
| 2418 | vessel_loss_daily(:,:) = zero |
|---|
| 2419 | |
|---|
| 2420 | ELSE |
|---|
| 2421 | |
|---|
| 2422 | ! In stomate.f90 XIOS will be called 48 times per day and it will |
|---|
| 2423 | ! store the average. That is not at all what we want for, e.g. |
|---|
| 2424 | ! vessel_loss_daily. Therefore we will write NaN 47 times and only the |
|---|
| 2425 | ! daily value we are interested in at the end of the day. |
|---|
| 2426 | tmp(:,:) = xios_default_val |
|---|
| 2427 | tmp2(:,:,:) = xios_default_val |
|---|
| 2428 | CALL xios_orchidee_send_field("SAP_INIT_DROUGHT_c",tmp2(:,:,:)) |
|---|
| 2429 | CALL xios_orchidee_send_field("KILL_VESSELS",tmp(:,:)) |
|---|
| 2430 | CALL xios_orchidee_send_field("VESSEL_LOSS_PREVIOUS",tmp(:,:)) |
|---|
| 2431 | CALL xios_orchidee_send_field("VESSEL_LOSS_DAILY",tmp(:,:)) |
|---|
| 2432 | CALL xios_orchidee_send_field("VL_DIFF_DAILY",tmp(:,:)) |
|---|
| 2433 | CALL xios_orchidee_send_field("VESSEL_MORTALITY_DAILY",tmp(:,:)) |
|---|
| 2434 | |
|---|
| 2435 | END IF |
|---|
| 2436 | |
|---|
| 2437 | ! Debug |
|---|
| 2438 | IF (printlev_loc>=4) THEN |
|---|
| 2439 | IF(do_slow) THEN |
|---|
| 2440 | WRITE(numout,*) 'CHECK: vegstress_day after stomate_accu',& |
|---|
| 2441 | vegstress_day(:,:) |
|---|
| 2442 | ENDIF |
|---|
| 2443 | ENDIF |
|---|
| 2444 | !- |
|---|
| 2445 | |
|---|
| 2446 | ! Here we add some calculations for daily max/min for windthrow module |
|---|
| 2447 | IF (ok_windthrow) THEN |
|---|
| 2448 | |
|---|
| 2449 | ! Calculate the actual wind speed |
|---|
| 2450 | wind_speed_actual(:) = SQRT(u(:)**2 + v(:)**2) |
|---|
| 2451 | |
|---|
| 2452 | ! Accumulate the half hourly values into a daily value. Accumulate the |
|---|
| 2453 | ! daily wind speed first and then take the average. grnd_80 is the index |
|---|
| 2454 | ! of ngrnd closest to 80 cm depth. stempdiag is discretized along diaglev |
|---|
| 2455 | ! (see control.f90) meaning that stempdiag gives the temperature for the |
|---|
| 2456 | ! node as specified in znh (see vertical_soil.f90). |
|---|
| 2457 | wind_max_daily(:) = MAX(wind_speed_actual(:),wind_max_daily(:)) |
|---|
| 2458 | soil_max_daily(:) = MAX(stempdiag(:,grnd_80),soil_max_daily(:)) |
|---|
| 2459 | |
|---|
| 2460 | IF (do_slow) THEN |
|---|
| 2461 | |
|---|
| 2462 | ! wind_speed_daily/soil_temp_daily will be passed to the wind_damage |
|---|
| 2463 | ! module. wind_max_daily/soil_max_daily reset to zero so they can be |
|---|
| 2464 | ! used again for the next day |
|---|
| 2465 | wind_speed_daily(:) = wind_max_daily(:) |
|---|
| 2466 | wind_max_daily(:) = zero |
|---|
| 2467 | soil_temp_daily(:) = soil_max_daily(:) |
|---|
| 2468 | soil_max_daily(:) = zero |
|---|
| 2469 | |
|---|
| 2470 | ENDIF |
|---|
| 2471 | |
|---|
| 2472 | ENDIF |
|---|
| 2473 | |
|---|
| 2474 | IF (ok_pest) THEN |
|---|
| 2475 | DO ipts = 1,kjpindex |
|---|
| 2476 | IF (coszang(ipts) .GE. min_stomate) THEN |
|---|
| 2477 | ! 3.4 Calculate photoperiod and beetle diapause status |
|---|
| 2478 | DO ivm=2,nvm |
|---|
| 2479 | IF (daylight(ipts,ivm)*0.5 > diapause_thres_daylength(ivm)) THEN |
|---|
| 2480 | beetle_diapause(ipts,ivm) = 1 |
|---|
| 2481 | ENDIF |
|---|
| 2482 | ENDDO |
|---|
| 2483 | ENDIF |
|---|
| 2484 | ENDDO |
|---|
| 2485 | ENDIF |
|---|
| 2486 | |
|---|
| 2487 | !! Calculate the light that reaches each canopy layer |
|---|
| 2488 | ! Compute seasonal daytime transmitted light to canopy levels |
|---|
| 2489 | ! This quantity is used to calculate how much recruitment can occur |
|---|
| 2490 | ! underneath the canopy. Recruitment is simulated in stomate_prescribe.f90 |
|---|
| 2491 | DO ipts=1,kjpindex |
|---|
| 2492 | |
|---|
| 2493 | DO ivm=1,nvm |
|---|
| 2494 | |
|---|
| 2495 | ! If we are at a daytime time step and there is growth (gpp>0) then |
|---|
| 2496 | ! accumulate instantaneous transmitted light to each canopy level |
|---|
| 2497 | IF ( coszang(ipts) .GT. min_stomate .AND. & |
|---|
| 2498 | gpp(ipts,ivm) .GT. min_stomate .AND. & |
|---|
| 2499 | Pgap_cumul(ipts,ivm,1).NE.zero) THEN |
|---|
| 2500 | |
|---|
| 2501 | ! Use the light that was transmitted through all the layers |
|---|
| 2502 | ! to reach the forest floor (= level 1) |
|---|
| 2503 | daylight_count(ipts,ivm) = daylight_count(ipts,ivm) + 1 |
|---|
| 2504 | light_tran_to_floor_season(ipts,ivm) = & |
|---|
| 2505 | light_tran_to_floor_season(ipts,ivm) + & |
|---|
| 2506 | Pgap_cumul(ipts,ivm,1) |
|---|
| 2507 | |
|---|
| 2508 | ! Debug |
|---|
| 2509 | IF (printlev_loc.GT.4 .AND. ivm.EQ. test_pft)THEN |
|---|
| 2510 | WRITE(numout,*) 'It is daytime and growth occurs, '& |
|---|
| 2511 | &'daylight_count(ipts,ivm)= ', daylight_count(ipts,ivm) |
|---|
| 2512 | WRITE(numout,*) 'gpp(ipts,ivm)= ', gpp(ipts,ivm) |
|---|
| 2513 | WRITE(numout,*) 'Absolute transmitted light '& |
|---|
| 2514 | &'to the forest floor ',ivm,ipts,& |
|---|
| 2515 | light_tran_to_floor_season(ipts,ivm) |
|---|
| 2516 | ENDIF |
|---|
| 2517 | !- |
|---|
| 2518 | |
|---|
| 2519 | ENDIF ! daytime and growing season |
|---|
| 2520 | |
|---|
| 2521 | ENDDO |
|---|
| 2522 | |
|---|
| 2523 | ! Calculate average transmitted light at the end of the year |
|---|
| 2524 | IF (LastTsYear) THEN |
|---|
| 2525 | |
|---|
| 2526 | ! Calculate average transmitted light at the end of the year |
|---|
| 2527 | ! Only account for days during the growing season. Note that |
|---|
| 2528 | ! light_tran_to_floor_season is only a correctly calculated |
|---|
| 2529 | ! the last day of the year. That is OK because recruitment is |
|---|
| 2530 | ! calculated only the last day of the year as well. |
|---|
| 2531 | DO ivm=2,nvm |
|---|
| 2532 | |
|---|
| 2533 | IF (daylight_count(ipts,ivm) .GT. zero) THEN |
|---|
| 2534 | |
|---|
| 2535 | light_tran_to_floor_season(ipts,ivm) = & |
|---|
| 2536 | light_tran_to_floor_season(ipts,ivm) / & |
|---|
| 2537 | daylight_count(ipts,ivm) |
|---|
| 2538 | |
|---|
| 2539 | ELSE |
|---|
| 2540 | |
|---|
| 2541 | ! There was no GPP during this year in this PFT. Most |
|---|
| 2542 | ! likely this implies that there is no vegetation. So, |
|---|
| 2543 | ! all the light is transmitted to the ground level. |
|---|
| 2544 | ! The fraction of transmitted light is thus set to 1. |
|---|
| 2545 | light_tran_to_floor_season(ipts,ivm) = un |
|---|
| 2546 | |
|---|
| 2547 | ENDIF |
|---|
| 2548 | |
|---|
| 2549 | ! Debug |
|---|
| 2550 | IF(printlev_loc>=4)THEN |
|---|
| 2551 | WRITE(numout,*) 'DEBUG in stomate.f90 it is end of the ', & |
|---|
| 2552 | 'year in stomate.f90' |
|---|
| 2553 | WRITE(numout,*) 'daylight_count to divide by here is, ', & |
|---|
| 2554 | daylight_count(ipts,ivm) |
|---|
| 2555 | WRITE(numout,*) 'transmitted light, ',& |
|---|
| 2556 | light_tran_to_floor_season(ipts,ivm) |
|---|
| 2557 | ENDIF |
|---|
| 2558 | !- |
|---|
| 2559 | ENDDO |
|---|
| 2560 | |
|---|
| 2561 | ! Reset the counter for the next year. Note that |
|---|
| 2562 | ! light_tran_to_floor_season will be reset after |
|---|
| 2563 | ! it was send to XIOS and after it was used in |
|---|
| 2564 | ! stomate_prsecribe.f90 for calculating recruitment |
|---|
| 2565 | daylight_count(ipts,:) = zero |
|---|
| 2566 | |
|---|
| 2567 | ENDIF ! LastTsYear |
|---|
| 2568 | |
|---|
| 2569 | ENDDO ! ipts=1,kjpindex |
|---|
| 2570 | |
|---|
| 2571 | IF (.NOT.LastTsYear) THEN |
|---|
| 2572 | ! The correct value can only be calculated at the end |
|---|
| 2573 | ! of the year. Send an NaN to XIOS. |
|---|
| 2574 | tmp(:,:) = xios_default_val |
|---|
| 2575 | CALL xios_orchidee_send_field("LIGHT_TRAN_SEASON",tmp(:,:)) |
|---|
| 2576 | ELSE |
|---|
| 2577 | ! At the last day of the year we are sending the correct |
|---|
| 2578 | ! value to XIOS. |
|---|
| 2579 | CALL xios_orchidee_send_field("LIGHT_TRAN_SEASON",light_tran_to_floor_season(:,:)) |
|---|
| 2580 | ENDIF |
|---|
| 2581 | |
|---|
| 2582 | |
|---|
| 2583 | !! 4.1 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 2584 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 2585 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 2586 | CALL stomate_accu(do_slow, litterhumdiag, litterhum_daily) |
|---|
| 2587 | CALL stomate_accu(do_slow, temp_air, t2m_daily) |
|---|
| 2588 | CALL stomate_accu(do_slow, temp_sol, tsurf_daily) |
|---|
| 2589 | CALL stomate_accu(do_slow, stempdiag, tsoil_daily) |
|---|
| 2590 | CALL stomate_accu(do_slow, precip, precip_daily) |
|---|
| 2591 | CALL stomate_accu(do_slow, gpp_d, gpp_daily) |
|---|
| 2592 | CALL stomate_accu(do_slow, drainage_pft, drainage_daily) |
|---|
| 2593 | CALL stomate_accu(do_slow, tdeep, tdeep_daily) |
|---|
| 2594 | CALL stomate_accu(do_slow, hsdeep, hsdeep_daily) |
|---|
| 2595 | CALL stomate_accu(do_slow, decomp_rate,decomp_rate_daily) |
|---|
| 2596 | CALL stomate_accu(do_slow, snow, snow_daily) |
|---|
| 2597 | CALL stomate_accu(do_slow, pb * 100., pb_pa_daily) |
|---|
| 2598 | CALL stomate_accu(do_slow, temp_sol, temp_sol_daily) |
|---|
| 2599 | CALL stomate_accu(do_slow, snowdz, snowdz_daily) |
|---|
| 2600 | CALL stomate_accu(do_slow, snowrho, snowrho_daily) |
|---|
| 2601 | |
|---|
| 2602 | !! 4.2 Daily minimum temperature |
|---|
| 2603 | t2m_min_daily(:) = MIN( temp_air(:), t2m_min_daily(:) ) |
|---|
| 2604 | |
|---|
| 2605 | !! 4.3 Calculate maintenance respiration |
|---|
| 2606 | ! Note: lai is passed as output argument to overcome previous problems with |
|---|
| 2607 | ! natural and agricultural vegetation types. |
|---|
| 2608 | CALL maint_respiration & |
|---|
| 2609 | & (kjpindex, temp_air, t2m_longterm, stempdiag, root_profile, & |
|---|
| 2610 | & circ_class_n, circ_class_biomass,resp_maint_part_radia, cn_leaf_init_2D) |
|---|
| 2611 | |
|---|
| 2612 | ! Maintenance respiration separated by plant parts |
|---|
| 2613 | resp_maint_part(:,:,:) = resp_maint_part(:,:,:) & |
|---|
| 2614 | & + resp_maint_part_radia(:,:,:) |
|---|
| 2615 | |
|---|
| 2616 | !! Calculate how much bm will be added to the litter during this |
|---|
| 2617 | ! time step. Needs to be done before the mass balance check because |
|---|
| 2618 | ! the values calculated here have to be used in the mass balance |
|---|
| 2619 | ! check |
|---|
| 2620 | ! Including: litter update, lignin content, PFT parts, litter decay, |
|---|
| 2621 | ! litter heterotrophic respiration, dead leaf soil cover. |
|---|
| 2622 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 2623 | n_mineralisation(:,:) = zero |
|---|
| 2624 | IF (do_slow) THEN |
|---|
| 2625 | ! Use the residual to achieve a higher precision of the calculations |
|---|
| 2626 | turnover_littercalc(:,:,:,:) = turnover_resid(:,:,:,:) |
|---|
| 2627 | bm_to_littercalc(:,:,:,:) = bm_to_litter_resid(:,:,:,:) |
|---|
| 2628 | tree_bm_to_littercalc(:,:,:,:) = tree_bm_to_litter_resid(:,:,:,:) |
|---|
| 2629 | ELSE |
|---|
| 2630 | ! Use 1/48th of the daily turnover and bm_to_litter. |
|---|
| 2631 | turnover_littercalc(:,:,:,:) = turnover_daily(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2632 | bm_to_littercalc(:,:,:,:) = bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2633 | tree_bm_to_littercalc(:,:,:,:) = tree_bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2634 | ENDIF |
|---|
| 2635 | |
|---|
| 2636 | !! 4.4 Initialize check for mass balance closure |
|---|
| 2637 | ! Mass balance closure for the half-hourly (dt_sechiba) |
|---|
| 2638 | ! processes in stomate.f90. This test is always performed. |
|---|
| 2639 | ! If err_act.EQ.1 then the value of the mass balance error |
|---|
| 2640 | ! -if any- is written to the history file. |
|---|
| 2641 | check_intern(:,:,:,:) = zero |
|---|
| 2642 | pool_start(:,:,:) = zero |
|---|
| 2643 | DO iele = 1,nelements |
|---|
| 2644 | |
|---|
| 2645 | ! atm_to_bm has as intent inout, the variable |
|---|
| 2646 | ! accumulates carbon over the course of a day. |
|---|
| 2647 | ! Use the difference between the start and end of |
|---|
| 2648 | ! this routine to account for the change in |
|---|
| 2649 | ! atm_to_bm |
|---|
| 2650 | check_intern(:,:,iatm2land,iele) = - un * & |
|---|
| 2651 | atm_to_bm(:,:,iele) * veget_max(:,:) * dt_sechiba |
|---|
| 2652 | |
|---|
| 2653 | ! Biomass pool (gC m-2)*(m2 m-2). |
|---|
| 2654 | ! Note that we only check where the bm_to_litter and turnover_daily |
|---|
| 2655 | ! are going to be processed during this time step. With every time step the |
|---|
| 2656 | ! litter pool will increase but the values of turnover_daily and |
|---|
| 2657 | ! bm_to_litter remain constant in stomate.lpj. The values of |
|---|
| 2658 | ! bm_to_litter_resid and turnover)resid are changing with every time |
|---|
| 2659 | ! step. |
|---|
| 2660 | DO ipar = 1,nparts |
|---|
| 2661 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2662 | (turnover_littercalc(:,:,ipar,iele) + & |
|---|
| 2663 | bm_to_littercalc(:,:,ipar,iele)) * veget_max(:,:) |
|---|
| 2664 | ENDDO |
|---|
| 2665 | |
|---|
| 2666 | ! Litter pool (gC m-2)*(m2 m-2) |
|---|
| 2667 | DO ilitt = 1,nlitt |
|---|
| 2668 | DO ilev = 1,nlevs |
|---|
| 2669 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2670 | litter(:,ilitt,:,ilev,iele) * veget_max(:,:) |
|---|
| 2671 | ENDDO |
|---|
| 2672 | ENDDO |
|---|
| 2673 | |
|---|
| 2674 | IF (ok_soil_carbon_discretization) THEN |
|---|
| 2675 | ! Define the soil layers |
|---|
| 2676 | zf_soil(:) = zero |
|---|
| 2677 | zi_soil(:) = zero |
|---|
| 2678 | zi_soil(:) = znt(:) |
|---|
| 2679 | zf_soil(1:ngrnd) = zlt(:) |
|---|
| 2680 | zf_soil(0) = 0. |
|---|
| 2681 | ! Soil carbon (gC m-3) * (m2 m-2) |
|---|
| 2682 | DO igrn = 1,ngrnd |
|---|
| 2683 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2684 | (deepSOM_a(:,igrn,:,iele) + deepSOM_s(:,igrn,:,iele) + & |
|---|
| 2685 | deepSOM_p(:,igrn,:,iele)) * & |
|---|
| 2686 | (zf_soil(igrn)-zf_soil(igrn-1)) * veget_max(:,:) |
|---|
| 2687 | END DO |
|---|
| 2688 | ELSE |
|---|
| 2689 | ! Soil carbon (gC m-2) * (m2 m-2) |
|---|
| 2690 | DO icarb = 1,ncarb |
|---|
| 2691 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2692 | som(:,icarb,:,iele) * veget_max(:,:) |
|---|
| 2693 | ENDDO |
|---|
| 2694 | ENDIF |
|---|
| 2695 | |
|---|
| 2696 | DO ivm = 1, nvm |
|---|
| 2697 | pool_start(:,ivm,iele) = pool_start(:,ivm,iele) + & |
|---|
| 2698 | SUM(harvest_pool_acc(:,ivm,:,iele),2)/area(:) |
|---|
| 2699 | END DO |
|---|
| 2700 | |
|---|
| 2701 | ENDDO ! # nelements |
|---|
| 2702 | |
|---|
| 2703 | ! Account for the N-pool in the soil |
|---|
| 2704 | DO inspec = 1,nnspec |
|---|
| 2705 | pool_start(:,:,initrogen) = pool_start(:,:,initrogen) + & |
|---|
| 2706 | soil_n_min(:,:,inspec) * veget_max(:,:) |
|---|
| 2707 | ENDDO |
|---|
| 2708 | |
|---|
| 2709 | ! Initialize check for area conservation |
|---|
| 2710 | veget_max_begin(:,:) = veget_max(:,:) |
|---|
| 2711 | |
|---|
| 2712 | !! 4.5 Litter dynamics and litter heterothropic respiration |
|---|
| 2713 | ! Including: litter update, lignin content, PFT parts, litter decay, |
|---|
| 2714 | ! litter heterotrophic respiration, dead leaf soil cover. |
|---|
| 2715 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 2716 | n_mineralisation(:,:) = zero |
|---|
| 2717 | IF (do_slow) THEN |
|---|
| 2718 | ! Use the residual to achieve a higher precision of the calculations |
|---|
| 2719 | turnover_littercalc(:,:,:,:) = turnover_resid(:,:,:,:) |
|---|
| 2720 | bm_to_littercalc(:,:,:,:) = bm_to_litter_resid(:,:,:,:) |
|---|
| 2721 | tree_bm_to_littercalc(:,:,:,:) = tree_bm_to_litter_resid(:,:,:,:) |
|---|
| 2722 | ELSE |
|---|
| 2723 | ! Use 1/48th of the daily turnover and bm_to_litter. |
|---|
| 2724 | turnover_littercalc(:,:,:,:) = turnover_daily(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2725 | bm_to_littercalc(:,:,:,:) = bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2726 | tree_bm_to_littercalc(:,:,:,:) = tree_bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2727 | ENDIF |
|---|
| 2728 | |
|---|
| 2729 | CALL littercalc (kjpindex, & |
|---|
| 2730 | turnover_littercalc, bm_to_littercalc, tree_bm_to_littercalc, & |
|---|
| 2731 | veget_max, temp_sol, stempdiag, shumdiag, litterhumdiag, som, & |
|---|
| 2732 | clay, silt, soil_n_min, n_input, month, harvest_pool_acc, litter, dead_leaves, & |
|---|
| 2733 | lignin_struc, & |
|---|
| 2734 | lignin_wood, n_mineralisation, deadleaf_cover, resp_hetero_litter, & |
|---|
| 2735 | som_input_inst, control_temp_inst, control_moist_inst, n_fungivores, & |
|---|
| 2736 | matrixA, vectorB, CN_target, CN_som_litter_longterm, tau_CN_longterm, & |
|---|
| 2737 | ld_redistribute, circ_class_biomass, circ_class_n, tsoil_decomp) |
|---|
| 2738 | |
|---|
| 2739 | ! Calculate the residuals which are then used at the last time step. This |
|---|
| 2740 | ! approach helps to get a higher precision in the consistency cross-checks |
|---|
| 2741 | ! for nbp. |
|---|
| 2742 | IF (do_slow) THEN |
|---|
| 2743 | ! At the last time step the residual should be exactly zero as calculated |
|---|
| 2744 | ! above |
|---|
| 2745 | turnover_resid(:,:,:,:) = zero |
|---|
| 2746 | bm_to_litter_resid(:,:,:,:) = zero |
|---|
| 2747 | tree_bm_to_litter_resid(:,:,:,:) = zero |
|---|
| 2748 | ELSE |
|---|
| 2749 | ! Update the remaining turnover and bm_to_litter |
|---|
| 2750 | turnover_resid(:,:,:,:) = turnover_resid(:,:,:,:) - & |
|---|
| 2751 | turnover_littercalc(:,:,:,:) |
|---|
| 2752 | bm_to_litter_resid(:,:,:,:) = bm_to_litter_resid(:,:,:,:) - & |
|---|
| 2753 | bm_to_littercalc(:,:,:,:) |
|---|
| 2754 | tree_bm_to_litter_resid(:,:,:,:) = tree_bm_to_litter_resid(:,:,:,:) - & |
|---|
| 2755 | tree_bm_to_littercalc(:,:,:,:) |
|---|
| 2756 | ENDIF |
|---|
| 2757 | |
|---|
| 2758 | ! Heterothropic litter respiration during time step ::dt_sechiba |
|---|
| 2759 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2760 | resp_hetero_litter(:,:) = resp_hetero_litter(:,:) * dt_sechiba/one_day |
|---|
| 2761 | |
|---|
| 2762 | IF ( ok_soil_carbon_discretization ) THEN |
|---|
| 2763 | ! BG 201902: I commented the following line since it seems that in MICT pb is |
|---|
| 2764 | ! converted by error in hpa whereas it is already in hpa |
|---|
| 2765 | ! pb_pa = pb * 100. |
|---|
| 2766 | |
|---|
| 2767 | !permafrost: get the residence time for soil carbon |
|---|
| 2768 | IF ( printlev>=3 ) WRITE(*,*) 'cdk debug stomate: prep to calc fbact' |
|---|
| 2769 | tdeep_celsius(:,:,:) = 0 |
|---|
| 2770 | tdeep_celsius = tdeep - ZeroCelsius |
|---|
| 2771 | fbact = stomate_soil_carbon_discretization_microactem ( & |
|---|
| 2772 | tdeep_celsius, frozen_respiration_func, hsdeep, kjpindex, ngrnd, nvm, znt) |
|---|
| 2773 | decomp_rate = 1./fbact |
|---|
| 2774 | heat_Zimov = zero |
|---|
| 2775 | ! should input daily-averaged values here |
|---|
| 2776 | !temp_sol -> tsurf daily, tdeep, hsdeep, stempdiag, shumdiag, |
|---|
| 2777 | !profil_froz_diag, snow, pb_pa... |
|---|
| 2778 | |
|---|
| 2779 | CALL stomate_soil_carbon_discretization_deep_somcycle(kjpindex, index, itime, & |
|---|
| 2780 | dt_sechiba, lalo, clay, temp_sol, tdeep, hsdeep, snow, heat_Zimov, pb, & |
|---|
| 2781 | sfluxCH4_deep, sfluxCO2_deep, deepSOM_a, deepSOM_s, deepSOM_p, O2_soil, & |
|---|
| 2782 | CH4_soil, O2_snow, CH4_snow, depth_organic_soil, som_input_inst, & |
|---|
| 2783 | veget_max, altmax, som, som_surf, resp_hetero_soil, & |
|---|
| 2784 | fbact, CN_target, fixed_cryoturbation_depth, snowdz, snowrho, & |
|---|
| 2785 | n_mineralisation, root_depth) |
|---|
| 2786 | |
|---|
| 2787 | resp_hetero_soil(:,:) = resp_hetero_soil(:,:) * dt_sechiba/one_day |
|---|
| 2788 | |
|---|
| 2789 | ! Total heterothrophic respiration during time step ::dt_sechiba |
|---|
| 2790 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2791 | resp_hetero_radia(:,:) = resp_hetero_litter(:,:) + resp_hetero_soil(:,:) |
|---|
| 2792 | resp_hetero_d(:,:) = resp_hetero_d(:,:) + resp_hetero_radia(:,:) |
|---|
| 2793 | resp_hetero_litter_d(:,:) = resp_hetero_litter_d(:,:) + resp_hetero_litter(:,:) |
|---|
| 2794 | resp_hetero_soil_d(:,:) = resp_hetero_soil_d(:,:) + resp_hetero_soil(:,:) |
|---|
| 2795 | |
|---|
| 2796 | ! Sum heterotrophic and autotrophic respiration in soil |
|---|
| 2797 | resp_total_soil(:,:) = resp_hetero_radia(:,:) + & |
|---|
| 2798 | resp_maint_part_radia(:,:,isapbelow) + resp_maint_part_radia(:,:,iroot) |
|---|
| 2799 | |
|---|
| 2800 | som_total(:,:,:,:) = deepSOM_a(:,:,:,:) + deepSOM_s(:,:,:,:) + deepSOM_p(:,:,:,:) |
|---|
| 2801 | |
|---|
| 2802 | ! separate resp_hetero_litter and resp_hetero_soil for history file |
|---|
| 2803 | CALL histwrite_p (hist_id_stomate, 'resp_hetero_soil', itime, & |
|---|
| 2804 | resp_hetero_soil(:,:), kjpindex*nvm, horipft_index) |
|---|
| 2805 | CALL histwrite_p (hist_id_stomate, 'resp_hetero_litter', itime, & |
|---|
| 2806 | resp_hetero_litter(:,:), kjpindex*nvm, horipft_index) |
|---|
| 2807 | |
|---|
| 2808 | ELSE |
|---|
| 2809 | |
|---|
| 2810 | !! 4.5 Soil carbon dynamics and soil heterotrophic respiration |
|---|
| 2811 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 2812 | CALL som_dynamics (kjpindex, clay, silt, veget_max,& |
|---|
| 2813 | som_input_inst, control_temp_inst, control_moist_inst, drainage_pft,& |
|---|
| 2814 | CN_target, som, soil_n_min, resp_hetero_soil, matrixA, & |
|---|
| 2815 | n_mineralisation, CN_som_litter_longterm, tau_CN_longterm) |
|---|
| 2816 | |
|---|
| 2817 | ! Initialize variables for soil carbon discretization |
|---|
| 2818 | som_surf(:,:,:,:) = som(:,:,:,:) |
|---|
| 2819 | som_total(:,:,:,:) = zero |
|---|
| 2820 | heat_Zimov = zero |
|---|
| 2821 | |
|---|
| 2822 | ! Heterothropic soil respiration during time step ::dt_sechiba |
|---|
| 2823 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2824 | resp_hetero_soil(:,:) = resp_hetero_soil(:,:) * dt_sechiba/one_day |
|---|
| 2825 | |
|---|
| 2826 | ! Total heterothrophic respiration during time step ::dt_sechiba |
|---|
| 2827 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2828 | resp_hetero_radia(:,:) = resp_hetero_litter(:,:) + resp_hetero_soil(:,:) |
|---|
| 2829 | resp_hetero_d(:,:) = resp_hetero_d(:,:) + resp_hetero_radia(:,:) |
|---|
| 2830 | resp_hetero_litter_d(:,:) = resp_hetero_litter_d(:,:) + resp_hetero_litter(:,:) |
|---|
| 2831 | resp_hetero_soil_d(:,:) = resp_hetero_soil_d(:,:) + resp_hetero_soil(:,:) |
|---|
| 2832 | |
|---|
| 2833 | ! Sum heterotrophic and autotrophic respiration in soil. Note that this is an |
|---|
| 2834 | ! estimate because in stomate resp_maint is recalculated while accounting |
|---|
| 2835 | ! for the available C. Not all respiration estimated in resp_maint_part_radia |
|---|
| 2836 | ! will always happen. |
|---|
| 2837 | resp_total_soil(:,:) = resp_hetero_radia(:,:) + & |
|---|
| 2838 | resp_maint_part_radia(:,:,isapbelow) + resp_maint_part_radia(:,:,iroot) |
|---|
| 2839 | |
|---|
| 2840 | IF (printlev>=3) WRITE (numout,*) '4.5' |
|---|
| 2841 | IF (printlev>=3) WRITE (numout,*) 'resp_hetero_litter(test_grid,test_pft):', & |
|---|
| 2842 | resp_hetero_litter(test_grid,test_pft) |
|---|
| 2843 | IF (printlev>=3) WRITE (numout,*) 'resp_hetero_soil(test_grid,test_pft):', & |
|---|
| 2844 | resp_hetero_soil(test_grid,test_pft) |
|---|
| 2845 | IF (printlev>=3) WRITE (numout,*) 'resp_maint_part_radia(test_grid,test_pft,isapbelow):', & |
|---|
| 2846 | resp_maint_part_radia(test_grid,test_pft,isapbelow) |
|---|
| 2847 | IF (printlev>=3) WRITE (numout,*) 'resp_maint_part_radia(test_grid,test_pft,iroot):', & |
|---|
| 2848 | resp_maint_part_radia(test_grid,test_pft,iroot) |
|---|
| 2849 | |
|---|
| 2850 | ENDIF ! End of if (ok_soil_carbon_discretization) |
|---|
| 2851 | |
|---|
| 2852 | IF (ok_ncycle) THEN |
|---|
| 2853 | CALL nitrogen_dynamics(kjpindex, njsc, clay, MAX(zero, un - silt - clay), & |
|---|
| 2854 | tsoil_decomp, tmc_pft, drainage_pft, runoff_pft, swc_pft, veget_max, & |
|---|
| 2855 | resp_total_soil, som, & |
|---|
| 2856 | n_input, month, soil_ph, n_mineralisation, pb, n_fungivores, & |
|---|
| 2857 | plant_n_uptake, bulk, soil_n_min, p_O2, bact, atm_to_bm, & |
|---|
| 2858 | leaching, emission, ld_redistribute, circ_class_biomass, & |
|---|
| 2859 | circ_class_n, cn_leaf_min_2D, cn_leaf_max_2D, cn_leaf_init_2D, & |
|---|
| 2860 | mcs_hydrol, mcfc_hydrol, croot_longterm, n_reserve_longterm, & |
|---|
| 2861 | sugar_load) |
|---|
| 2862 | ENDIF |
|---|
| 2863 | |
|---|
| 2864 | ! Accumulate over the day |
|---|
| 2865 | plant_n_uptake_daily(:,:,:) = plant_n_uptake_daily(:,:,:) + plant_n_uptake(:,:,:) |
|---|
| 2866 | atm_to_bm_daily(:,:,:) = atm_to_bm_daily(:,:,:) + atm_to_bm(:,:,:) |
|---|
| 2867 | emission_daily(:,:,:) = emission_daily(:,:,:) + emission(:,:,:) |
|---|
| 2868 | leaching_daily(:,:,:) = leaching_daily(:,:,:) + leaching(:,:,:) |
|---|
| 2869 | n_input_daily(:,:,:) = n_input_daily(:,:,:) + n_input(:,:,month,:) |
|---|
| 2870 | |
|---|
| 2871 | !! 4.7 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 2872 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 2873 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 2874 | CALL stomate_accu (do_slow, som_input_inst, som_input_daily) |
|---|
| 2875 | CALL stomate_accu (do_slow, n_mineralisation, n_mineralisation_d) |
|---|
| 2876 | |
|---|
| 2877 | !! 4.8 Check numerical consistency of this routine |
|---|
| 2878 | ! These checks only check the processes that happen |
|---|
| 2879 | ! every half-hour (dt_radia). This test is always |
|---|
| 2880 | ! performed. If err_act.EQ.1 then the value of the |
|---|
| 2881 | ! mass balance error -if any- is written to the |
|---|
| 2882 | ! history file. |
|---|
| 2883 | |
|---|
| 2884 | ! Check surface area |
|---|
| 2885 | CALL check_vegetation_area("stomate dt_sechiba", kjpindex, veget_max_begin, & |
|---|
| 2886 | veget_max,'pixel') |
|---|
| 2887 | |
|---|
| 2888 | ! 4.8.2 Mass balance closure (dt_radia) |
|---|
| 2889 | ! Calculate final carbon and nitrogen pools |
|---|
| 2890 | pool_end(:,:,:) = zero |
|---|
| 2891 | DO iele = 1,nelements |
|---|
| 2892 | |
|---|
| 2893 | ! Litter pool |
|---|
| 2894 | DO ilitt = 1,nlitt |
|---|
| 2895 | DO ilev = 1,nlevs |
|---|
| 2896 | pool_end(:,:,iele) = pool_end(:,:,iele) + & |
|---|
| 2897 | litter(:,ilitt,:,ilev,iele) * veget_max(:,:) |
|---|
| 2898 | ENDDO |
|---|
| 2899 | ENDDO |
|---|
| 2900 | |
|---|
| 2901 | IF (ok_soil_carbon_discretization) THEN |
|---|
| 2902 | ! Soil carbon |
|---|
| 2903 | DO igrn = 1,ngrnd |
|---|
| 2904 | pool_end(:,:,iele) = pool_end(:,:,iele) + & |
|---|
| 2905 | (deepSOM_a(:,igrn,:,iele) + deepSOM_s(:,igrn,:,iele) + & |
|---|
| 2906 | deepSOM_p(:,igrn,:,iele)) * & |
|---|
| 2907 | (zf_soil(igrn)-zf_soil(igrn-1)) * veget_max(:,:) |
|---|
| 2908 | END DO |
|---|
| 2909 | ELSE |
|---|
| 2910 | ! Soil carbon (gC m-2) * (m2 m-2) |
|---|
| 2911 | DO icarb = 1,ncarb |
|---|
| 2912 | pool_end(:,:,iele) = pool_end(:,:,iele) + & |
|---|
| 2913 | som(:,icarb,:,iele) * veget_max(:,:) |
|---|
| 2914 | ENDDO |
|---|
| 2915 | ENDIF |
|---|
| 2916 | |
|---|
| 2917 | DO ivm = 1, nvm |
|---|
| 2918 | pool_end(:,ivm,iele) = pool_end(:,ivm,iele) + & |
|---|
| 2919 | SUM(harvest_pool_acc(:,ivm,:,iele),2)/area(:) |
|---|
| 2920 | END DO |
|---|
| 2921 | ENDDO ! # nelements |
|---|
| 2922 | |
|---|
| 2923 | ! The nitrogen pool in the soil may have changed |
|---|
| 2924 | DO inspec = 1,nnspec |
|---|
| 2925 | pool_end(:,:,initrogen) = pool_end(:,:,initrogen) + & |
|---|
| 2926 | soil_n_min(:,:,inspec) * veget_max(:,:) |
|---|
| 2927 | ENDDO |
|---|
| 2928 | |
|---|
| 2929 | DO ivm = 1,nvm |
|---|
| 2930 | pool_end(:,ivm,initrogen) = pool_end(:,ivm,initrogen) + & |
|---|
| 2931 | n_fungivores(:,ivm) * veget_max(:,ivm) |
|---|
| 2932 | ENDDO |
|---|
| 2933 | |
|---|
| 2934 | ! Calculate mass balance |
|---|
| 2935 | ! Specific processes |
|---|
| 2936 | check_intern(:,:,iland2atm,icarbon) = -un * (resp_hetero_litter(:,:) + & |
|---|
| 2937 | resp_hetero_soil(:,:)) * veget_max(:,:) |
|---|
| 2938 | |
|---|
| 2939 | DO ininput = 1,ninput |
|---|
| 2940 | check_intern(:,:,iatm2land,initrogen) = & |
|---|
| 2941 | check_intern(:,:,iatm2land,initrogen) + & |
|---|
| 2942 | n_input(:,:,month,ininput)*dt_sechiba/one_day * veget_max(:,:) |
|---|
| 2943 | ENDDO |
|---|
| 2944 | |
|---|
| 2945 | DO inspec= 1, nnspec |
|---|
| 2946 | check_intern(:,:,iland2atm,initrogen) = & |
|---|
| 2947 | check_intern(:,:,iland2atm,initrogen) & |
|---|
| 2948 | -un * (emission(:,:,inspec) * veget_max(:,:)) |
|---|
| 2949 | ENDDO |
|---|
| 2950 | |
|---|
| 2951 | DO inionspec = 1, nionspec |
|---|
| 2952 | check_intern(:,:,ilat2out,initrogen) = & |
|---|
| 2953 | check_intern(:,:,ilat2out,initrogen) & |
|---|
| 2954 | -un * ( plant_n_uptake(:,:,inionspec) + & |
|---|
| 2955 | leaching(:,:,inionspec) ) * veget_max(:,:) |
|---|
| 2956 | ENDDO |
|---|
| 2957 | |
|---|
| 2958 | ! Common processes |
|---|
| 2959 | DO iele = 1,nelements |
|---|
| 2960 | check_intern(:,:,iatm2land,iele) = check_intern(:,:,iatm2land,iele) + & |
|---|
| 2961 | atm_to_bm(:,:,iele) * dt_sechiba * veget_max(:,:) |
|---|
| 2962 | check_intern(:,:,ipoolchange,iele) = & |
|---|
| 2963 | -un * (pool_end(:,:,iele) - pool_start(:,:,iele)) |
|---|
| 2964 | ENDDO |
|---|
| 2965 | |
|---|
| 2966 | closure_intern(:,:,:) = zero |
|---|
| 2967 | DO imbc = 1,nmbcomp |
|---|
| 2968 | DO iele = 1,nelements |
|---|
| 2969 | ! Debug |
|---|
| 2970 | IF (printlev_loc>=4) WRITE(numout,*) & |
|---|
| 2971 | 'check_intern, ivm, imbc, iele, ', imbc, & |
|---|
| 2972 | iele, SUM(check_intern(:,:,imbc,iele),2) |
|---|
| 2973 | !- |
|---|
| 2974 | closure_intern(:,:,iele) = closure_intern(:,:,iele) + & |
|---|
| 2975 | check_intern(:,:,imbc,iele) |
|---|
| 2976 | ENDDO |
|---|
| 2977 | ENDDO |
|---|
| 2978 | |
|---|
| 2979 | CALL check_mass_balance("stomate dt_sechiba", closure_intern, kjpindex, & |
|---|
| 2980 | pool_end, pool_start, veget_max, 'pft') |
|---|
| 2981 | |
|---|
| 2982 | !! 5. Daily processes - performed at the end of the day |
|---|
| 2983 | IF (do_slow) THEN |
|---|
| 2984 | !+++CHECK+++ |
|---|
| 2985 | ! No longer needed. lai is no longer passed |
|---|
| 2986 | ! circ_class_biomass and circ_class_n are now the |
|---|
| 2987 | ! prognostic variables. |
|---|
| 2988 | !!$ !! 5.1 Update lai |
|---|
| 2989 | !!$ ! Use lai from stomate |
|---|
| 2990 | !!$ ! ?? check if this is the only time ok_pheno is used?? |
|---|
| 2991 | !!$ ! ?? Looks like it is the only time. But this variables probably is defined |
|---|
| 2992 | !!$ ! in stomate_constants or something, in which case, it is difficult to track. |
|---|
| 2993 | !!$ IF (ok_pheno) THEN |
|---|
| 2994 | !!$ !! 5.1.1 Update LAI |
|---|
| 2995 | !!$ ! Set lai of bare soil to zero |
|---|
| 2996 | !!$ lai(:,ibare_sechiba) = zero |
|---|
| 2997 | !!$ ! lai for all PFTs |
|---|
| 2998 | !!$ DO ipts = 1, kjpindex |
|---|
| 2999 | !!$ DO j = 2, nvm |
|---|
| 3000 | !!$ lai(ipts,j) = cc_to_lai(circ_class_biomass(ipts,j,:,ileaf,icarbon),& |
|---|
| 3001 | !!$ circ_class_n(ipts,j,:),j) |
|---|
| 3002 | !!$ ENDDO |
|---|
| 3003 | !!$ ENDDO |
|---|
| 3004 | !!$ frac_age(:,:,:) = leaf_frac(:,:,:) |
|---|
| 3005 | !!$ ELSE |
|---|
| 3006 | !!$ ! 5.1.2 Use a prescribed lai |
|---|
| 3007 | !!$ ! WARNING: code in setlai is effectively the same as the lines above |
|---|
| 3008 | !!$ ! Update subroutine if LAI should be prescribed. This is a bit an optimistic |
|---|
| 3009 | !!$ ! function. It is rather difficult to force an lai with a dynamic allocation |
|---|
| 3010 | !!$ ! and a dynamic nitrogen cycle. This will quickly result in inconsistencies. |
|---|
| 3011 | !!$ CALL setlai(kjpindex, lai, circ_class_biomass,circ_class_n) |
|---|
| 3012 | !!$ frac_age(:,:,:) = zero |
|---|
| 3013 | !!$ ENDIF |
|---|
| 3014 | !++++++++++++ |
|---|
| 3015 | |
|---|
| 3016 | !! 5.2 Calculate long-term "meteorological" and biological parameters |
|---|
| 3017 | ! mainly in support of calculating phenology. If LastTsYear=.TRUE. |
|---|
| 3018 | ! annual values are update (i.e. xx_lastyear). |
|---|
| 3019 | CALL season_pre_disturbance & |
|---|
| 3020 | & (kjpindex, dt_days, & |
|---|
| 3021 | & veget, veget_max, & |
|---|
| 3022 | & vegstress_day, t2m_daily, tsoil_daily, lalo, & |
|---|
| 3023 | & precip_daily, npp_daily, circ_class_biomass, circ_class_n, & |
|---|
| 3024 | & turnover_daily, gpp_daily, when_growthinit, & |
|---|
| 3025 | & SUM(resp_maint_part,3), resp_maint_week, & |
|---|
| 3026 | & maxvegstress_lastyear, maxvegstress_thisyear, & |
|---|
| 3027 | & minvegstress_lastyear, minvegstress_thisyear, & |
|---|
| 3028 | & maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 3029 | & gdd0_lastyear, gdd0_thisyear, & |
|---|
| 3030 | & precip_lastyear, precip_thisyear, & |
|---|
| 3031 | & lm_lastyearmax, lm_thisyearmax, & |
|---|
| 3032 | & maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 3033 | & vegstress_month, vegstress_week, t2m_longterm, tau_longterm, & |
|---|
| 3034 | & t2m_month, t2m_week, tsoil_month, & |
|---|
| 3035 | & npp_longterm, croot_longterm, turnover_longterm, gpp_week, & |
|---|
| 3036 | & plant_status, & |
|---|
| 3037 | & gdd_m5_dormance, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 3038 | & time_hum_min, hum_min_dormance, gdd_init_date, & |
|---|
| 3039 | & gdd_from_growthinit, herbivores, & |
|---|
| 3040 | & Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 3041 | & Tmin_spring_time, t2m_min_daily, & |
|---|
| 3042 | & cn_leaf_min_season,nstress_season, & |
|---|
| 3043 | & vegstress_season,rue_longterm, cn_leaf_init_2D, & |
|---|
| 3044 | & litter, leaf_age_crit, leaf_classes) |
|---|
| 3045 | |
|---|
| 3046 | |
|---|
| 3047 | !! 5.4 Waterstress |
|---|
| 3048 | |
|---|
| 3049 | ! The waterstress factor varies between 0.1 and 1 and is calculated |
|---|
| 3050 | ! from ::vegstress_season. The latter is only used in the allometric |
|---|
| 3051 | ! allocation and its time integral is determined by longevity_sap for trees |
|---|
| 3052 | ! (see constantes_mtc.f90 for longevity_sap and see pft_constantes.f90 for |
|---|
| 3053 | ! the definition of tau_hum_growingseason). The time integral for |
|---|
| 3054 | ! grasses and crops is a prescribed constant (see constantes.f90). By |
|---|
| 3055 | ! having ::wstress_fac working on the turnover, water stress is progated |
|---|
| 3056 | ! into LF. |
|---|
| 3057 | ! Because the calculated values for ::wstress_fac are too low for this purpose |
|---|
| 3058 | ! Sonke Zhaele multiply it by two in the N-branch. This approach maintains |
|---|
| 3059 | ! the physiological basis of KF while combining it with a simple |
|---|
| 3060 | ! multiplicative factor for water stress. Clearly after multiplication with |
|---|
| 3061 | ! 2, wstress is closer to 1 and will thus result in a KF values closer to |
|---|
| 3062 | ! the physiologically expected KF. |
|---|
| 3063 | ! In this implementation we take the sqrt (this is done in stomate where |
|---|
| 3064 | ! ::vegstress_day is calculated from ::stressed and ::unstressed. The |
|---|
| 3065 | ! transformation from the ratio between stressed an unstressed gpp into a |
|---|
| 3066 | ! numerical value that is used in the allocation and turnover is arbitrairy. |
|---|
| 3067 | ! A more physiological approach accounting for turgor would be needed to de |
|---|
| 3068 | ! fundamentally better. |
|---|
| 3069 | ! Note that the current implementation allows for the plants to adapt to drought |
|---|
| 3070 | ! by adjusting its allocation. This is a long-term effect and it is long-term |
|---|
| 3071 | ! because ::vegstress_season integrates over ::longevity_sap. For the moment no |
|---|
| 3072 | ! short term effects to drought are implemented. Short-term effects should be |
|---|
| 3073 | ! implmented on mortality (through loss of turgor, heat stress, carbon starvation). |
|---|
| 3074 | wstress_season(:,1) = zero |
|---|
| 3075 | wstress_month(:,1) = zero |
|---|
| 3076 | |
|---|
| 3077 | DO jv = 2,nvm |
|---|
| 3078 | |
|---|
| 3079 | ! Calculate waterstress |
|---|
| 3080 | ! Water stress used in stomate |
|---|
| 3081 | ! Set wstress to 1-vegstress so that the value is consistent with its |
|---|
| 3082 | ! meaning. wstress=0 indicates no stress, wstress=1 indicates stress |
|---|
| 3083 | wstress_season(:,jv) = un - MAX(vegstress_season(:,jv), min_water_stress) |
|---|
| 3084 | wstress_month(:,jv) = un - MAX(vegstress_month(:,jv), min_water_stress) |
|---|
| 3085 | |
|---|
| 3086 | !+++CHECK+++ |
|---|
| 3087 | ! The reduction of the leaf longevity should probably depend on |
|---|
| 3088 | ! the leaf skin temperature that will become available through |
|---|
| 3089 | ! the multi-layer energy budget. For the moment we don't have |
|---|
| 3090 | ! water stress on the leaves. A long term adaption could be |
|---|
| 3091 | ! through ::sla |
|---|
| 3092 | longevity_eff_leaf(:,jv) = longevity_leaf(jv) * un |
|---|
| 3093 | |
|---|
| 3094 | ! The reduction of the root longevity depends on the soil moisture |
|---|
| 3095 | ! stress which we believe is reasonably well captured by our |
|---|
| 3096 | ! proxy for wstress. We need to produce more roots to take the water |
|---|
| 3097 | ! from those layers that have water. |
|---|
| 3098 | ! feedback to c-allocation has been switched off |
|---|
| 3099 | longevity_eff_root(:,jv) = longevity_root(jv) * un |
|---|
| 3100 | |
|---|
| 3101 | ! The reduction of sapwood longevity should depend on the cavitation |
|---|
| 3102 | ! which is calculated in hydraulic_arch module. Should be linked |
|---|
| 3103 | ! once the memory of cavitation is calculated |
|---|
| 3104 | longevity_eff_sap(:,jv) = longevity_sap(jv) * un |
|---|
| 3105 | !+++++++++ |
|---|
| 3106 | |
|---|
| 3107 | ENDDO |
|---|
| 3108 | |
|---|
| 3109 | ! Add to history files |
|---|
| 3110 | ! If the soil-based wstress is used, the variables vegstress_xxx |
|---|
| 3111 | ! reflect the moisture in the soil. If the hydraulic architecture |
|---|
| 3112 | ! is used vegstress_xxx reflect the ratio between the potential |
|---|
| 3113 | ! and actual gpp. wstress_xxx variables are basically 1-vegstress_xxx |
|---|
| 3114 | ! with a minimal value. The xxx_month and xxx_season series of both |
|---|
| 3115 | ! variables are almost identical. Hence they were given a very |
|---|
| 3116 | ! different output level. |
|---|
| 3117 | CALL histwrite_p (hist_id_stomate, 'WSTRESS_SEASON', itime, & |
|---|
| 3118 | wstress_season(:,:), kjpindex*nvm, horipft_index) |
|---|
| 3119 | CALL histwrite_p (hist_id_stomate, 'WSTRESS_MONTH', itime, & |
|---|
| 3120 | wstress_month(:,:), kjpindex*nvm, horipft_index) |
|---|
| 3121 | CALL histwrite_p (hist_id_stomate, 'VEGSTRESS_SEASON', itime, & |
|---|
| 3122 | vegstress_season, kjpindex*nvm, horipft_index) |
|---|
| 3123 | CALL histwrite_p (hist_id_stomate, 'VEGSTRESS_WEEK', itime, & |
|---|
| 3124 | vegstress_week, kjpindex*nvm, horipft_index) |
|---|
| 3125 | |
|---|
| 3126 | CALL xios_orchidee_send_field("VEGSTRESS_DAY",vegstress_day(:,:)) |
|---|
| 3127 | CALL xios_orchidee_send_field("VEGSTRESS_WEEK",vegstress_week(:,:)) |
|---|
| 3128 | CALL xios_orchidee_send_field("VEGSTRESS_MONTH",vegstress_month(:,:)) |
|---|
| 3129 | CALL xios_orchidee_send_field("VEGSTRESS_SEASON",vegstress_season(:,:)) |
|---|
| 3130 | CALL xios_orchidee_send_field("WSTRESS_MONTH",wstress_month(:,:)) |
|---|
| 3131 | CALL xios_orchidee_send_field("WSTRESS_SEASON",wstress_season(:,:)) |
|---|
| 3132 | |
|---|
| 3133 | !! 5.3 Use all processes included in stomate |
|---|
| 3134 | !! 5.3.1 Activate stomate processes |
|---|
| 3135 | ! Activate stomate processes (the complete list of processes depends |
|---|
| 3136 | ! on whether the DGVM is used or not). Processes include: climate constraints |
|---|
| 3137 | ! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 3138 | ! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 3139 | ! all turnover processes, light competition, sapling establishment, lai and |
|---|
| 3140 | ! land cover change. |
|---|
| 3141 | CALL stomate_lpj_vegetation (kjpindex, dt_days, & |
|---|
| 3142 | & neighbours, resolution, herbivores, & |
|---|
| 3143 | & tsurf_daily, tsoil_daily, t2m_daily, t2m_min_daily, & |
|---|
| 3144 | & litterhum_daily, vegstress, humrel, & |
|---|
| 3145 | & maxvegstress_lastyear, minvegstress_lastyear, & |
|---|
| 3146 | & gdd0_lastyear, precip_lastyear, & |
|---|
| 3147 | & vegstress_month, vegstress_week, & |
|---|
| 3148 | & t2m_longterm, t2m_month, t2m_week, tau_longterm, & |
|---|
| 3149 | & tsoil_month, & |
|---|
| 3150 | & gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 3151 | & turnover_longterm, gpp_daily, gpp_week, resp_maint_week, & |
|---|
| 3152 | & time_hum_min, hum_min_dormance, maxfpc_lastyear, resp_maint_part,& |
|---|
| 3153 | & PFTpresent, age, fireindex, firelitter, & |
|---|
| 3154 | & leaf_age, leaf_frac, adapted, regenerate, & |
|---|
| 3155 | & plant_status,when_growthinit, litter, & |
|---|
| 3156 | & dead_leaves, som, som_surf, lignin_struc, lignin_wood, & |
|---|
| 3157 | & veget_max, veget_max_new, veget, fraclut, npp_longterm, croot_longterm, lm_lastyearmax, & |
|---|
| 3158 | & veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 3159 | & npp_daily, turnover_daily, turnover_resid, turnover_time,& |
|---|
| 3160 | & control_moist_inst, control_temp_inst, som_input_daily, & |
|---|
| 3161 | & atm_to_bm_daily, co2_fire, & |
|---|
| 3162 | & resp_hetero_d, resp_hetero_litter_d, resp_hetero_soil_d, resp_maint_d, resp_growth_d, & |
|---|
| 3163 | & deadleaf_cover, assim_param, qsintveg, & |
|---|
| 3164 | & bm_to_litter, bm_to_litter_resid, tree_bm_to_litter, tree_bm_to_litter_resid, & |
|---|
| 3165 | & prod_s, prod_m, prod_l, flux_s, flux_m, flux_l, & |
|---|
| 3166 | & flux_prod_s, flux_prod_m, flux_prod_l, carb_mass_total, & |
|---|
| 3167 | & fpc_max, MatrixA, MatrixV, VectorB, VectorU, & |
|---|
| 3168 | & deepSOM_a, deepSOM_s, deepSOM_p, & |
|---|
| 3169 | & Tseason, Tmin_spring_time, KF, k_latosa_adapt,& |
|---|
| 3170 | & cn_leaf_min_season, nstress_season, vegstress_season, soil_n_min, & |
|---|
| 3171 | & rue_longterm, plant_n_uptake_daily, & |
|---|
| 3172 | & circ_class_n, circ_class_biomass, forest_managed, spinup_clearcut, & |
|---|
| 3173 | & longevity_eff_leaf, longevity_eff_sap, longevity_eff_root, & |
|---|
| 3174 | & species_change_map, fm_change_map, lpft_replant, & |
|---|
| 3175 | & age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 3176 | & previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 3177 | & lab_fac, circ_class_dist, qmd_init, dia_init, & |
|---|
| 3178 | & harvest_pool_bound, harvest_pool_acc, & |
|---|
| 3179 | & harvest_type, harvest_cut, harvest_area_acc, & |
|---|
| 3180 | & lai_per_level, laieff_fit, laieff_isotrop, z_array_out, & |
|---|
| 3181 | & max_height_store, & |
|---|
| 3182 | & wstress_month, wstress_season, st_dist, litter_demand,& |
|---|
| 3183 | & light_tran_to_floor_season, p_O2, bact, & |
|---|
| 3184 | & CN_som_litter_longterm, & |
|---|
| 3185 | & wind_speed_daily, max_wind_speed_storm, count_storm, is_storm, & |
|---|
| 3186 | & soil_temp_daily, gap_area_save, & |
|---|
| 3187 | & woodharvestpft, & |
|---|
| 3188 | & fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 3189 | & cn_leaf_min_2D, cn_leaf_max_2D, cn_leaf_init_2D,bm_sapl_2D, & |
|---|
| 3190 | & sugar_load, & |
|---|
| 3191 | & n_reserve_longterm, loss_gain, frac_nobio, frac_nobio_new, & |
|---|
| 3192 | & burried_litter, burried_fresh_ltr, & |
|---|
| 3193 | & burried_fresh_som, burried_bact, burried_fungivores, & |
|---|
| 3194 | & burried_min_nitro, & |
|---|
| 3195 | & burried_som, burried_deepSOM_a, burried_deepSOM_s, & |
|---|
| 3196 | & burried_deepSOM_p,& |
|---|
| 3197 | & beetle_generation_index, & |
|---|
| 3198 | & season_drought_legacy, wood_leftover_legacy, & |
|---|
| 3199 | & beetle_pop_legacy, risk_index_legacy, risk_index, & |
|---|
| 3200 | & beetle_damage_legacy, beetle_flyaway, & |
|---|
| 3201 | & epidemic,epidemic_monitor, & |
|---|
| 3202 | & windthrow_suscept_monitor, beetle_pressure_monitor, & |
|---|
| 3203 | & suscept_index_monitor,beetle_diapause, sumTeff, & |
|---|
| 3204 | & kill_vessels, vessel_mortality_daily, vessel_loss_previous, & |
|---|
| 3205 | & biomass_init_drought, leaf_age_crit, leaf_classes, & |
|---|
| 3206 | & grow_season_len, doy_start_gs, doy_end_gs, mean_start_gs, & |
|---|
| 3207 | & emission_daily, leaching_daily, n_input, & |
|---|
| 3208 | & n_input_daily, co2_flux, & |
|---|
| 3209 | & nbp_accu_flux, nbp_pool_start, n_fungivores, root_profile, & |
|---|
| 3210 | & total_ba_init, maxgppweek_lastyear, us) |
|---|
| 3211 | |
|---|
| 3212 | !! 5.5.2 Long term adaptation of allocation to water stress |
|---|
| 3213 | ! ::wstress season is calculated as the seasonal mean of the |
|---|
| 3214 | ! ratio between the stressed and unstressed GPP. If the plant |
|---|
| 3215 | ! experiences a short spell of drought, leaves will be killed |
|---|
| 3216 | ! (see stomate_turnover). However, when the drought stress is |
|---|
| 3217 | ! maintained during the season, it is assumed that the plant |
|---|
| 3218 | ! will economise its canopy and therefore adjust its allocation |
|---|
| 3219 | ! factors to grow less leaves. To avoid that the canopy can only |
|---|
| 3220 | ! shrink the plants will try to grow more leaves when they do |
|---|
| 3221 | ! not experience any water stress. Extending the LAI, however, |
|---|
| 3222 | ! increases the chances that the plant will experience drough |
|---|
| 3223 | ! stress in the future. These feedbacks should stabilize the LAI. |
|---|
| 3224 | wstress_adapt(:,:) = zero |
|---|
| 3225 | WHERE (wstress_season(:,:) .LT. 0.01) |
|---|
| 3226 | |
|---|
| 3227 | ! Increase the leaf allocation by 5% over the whole |
|---|
| 3228 | ! year. If there was no water stress during the whole |
|---|
| 3229 | ! year, the following year more C will be allocated |
|---|
| 3230 | ! to the leaves. |
|---|
| 3231 | wstress_adapt(:,:) = 1.05 |
|---|
| 3232 | |
|---|
| 3233 | ELSEWHERE |
|---|
| 3234 | |
|---|
| 3235 | wstress_adapt(:,:) = wstress_season(:,:) |
|---|
| 3236 | |
|---|
| 3237 | ENDWHERE |
|---|
| 3238 | |
|---|
| 3239 | DO j = 2,nvm |
|---|
| 3240 | |
|---|
| 3241 | WHERE ( k_latosa_adapt(:,j) .GE. k_latosa_max(j) ) |
|---|
| 3242 | |
|---|
| 3243 | k_latosa_adapt(:,j) = k_latosa_max(j) |
|---|
| 3244 | |
|---|
| 3245 | ENDWHERE |
|---|
| 3246 | |
|---|
| 3247 | ENDDO |
|---|
| 3248 | |
|---|
| 3249 | CALL histwrite_p (hist_id_stomate, 'K_LATOSA_ADAPT', itime, & |
|---|
| 3250 | k_latosa_adapt(:,:), kjpindex*nvm, horipft_index) |
|---|
| 3251 | CALL xios_orchidee_send_field("K_LATOSA_ADAPT",k_latosa_adapt) |
|---|
| 3252 | |
|---|
| 3253 | !! Outputs from Stomate |
|---|
| 3254 | ! Calculate the total CO2 flux from land use change |
|---|
| 3255 | ! Note that flux_prod_x has a dimension to distinguish between |
|---|
| 3256 | ! products from luc and products from harvesting. There is also |
|---|
| 3257 | ! a dimension to distinguish between land cover types |
|---|
| 3258 | fco2_lu(:) = SUM( (flux_prod_s(:,icarbon,ilcc,:) + & |
|---|
| 3259 | flux_prod_m(:,icarbon,ilcc,:) + flux_prod_l(:,icarbon,ilcc,:) ),2) / & |
|---|
| 3260 | area(:) |
|---|
| 3261 | |
|---|
| 3262 | ! CO2 from wood harvest |
|---|
| 3263 | fco2_wh(:) = SUM(flux_s(:,:,icarbon,iharvest,iforest),2) + & |
|---|
| 3264 | SUM(flux_m(:,:,icarbon,iharvest,iforest),2) + & |
|---|
| 3265 | SUM(flux_l(:,:,icarbon,iharvest,iforest),2) |
|---|
| 3266 | fco2_ha(:) = SUM(flux_s(:,:,icarbon,iharvest,icrop),2) + & |
|---|
| 3267 | SUM(flux_m(:,:,icarbon,iharvest,icrop),2) + & |
|---|
| 3268 | SUM(flux_l(:,:,icarbon,iharvest,icrop),2) |
|---|
| 3269 | |
|---|
| 3270 | !+++CHECK+++ |
|---|
| 3271 | ! CHECK whether veget_max is correct when lcc is used. most likely this |
|---|
| 3272 | ! would only result in a small error but it is better to avoid this |
|---|
| 3273 | ! small error in the first place. Multiply every day with veget_max ? |
|---|
| 3274 | !! Respiration and fluxes |
|---|
| 3275 | ! In stomate_lpj only part of estimated resp_maint for the different plant |
|---|
| 3276 | ! parts may get used. resp_maint can therefore be less than resp_maint_part. |
|---|
| 3277 | ! Use the value for resp_maint calculated in stomate_lpj (growth_fun_all.f90) |
|---|
| 3278 | resp_maint(:,:) = resp_maint_d(:,:) * veget_max(:,:) * dt_sechiba / one_day |
|---|
| 3279 | resp_maint(:,ibare_sechiba) = zero |
|---|
| 3280 | resp_growth(:,:) = resp_growth_d(:,:) * veget_max(:,:) * & |
|---|
| 3281 | dt_sechiba / one_day |
|---|
| 3282 | resp_growth(:,ibare_sechiba) = zero |
|---|
| 3283 | resp_hetero(:,:) = resp_hetero_d(:,:) * veget_max(:,:) |
|---|
| 3284 | temp_growth(:)=t2m_month(:)-tp_00 |
|---|
| 3285 | !++++++++++++ |
|---|
| 3286 | |
|---|
| 3287 | !! 5.6b update forcing variables for soil carbon in soil |
|---|
| 3288 | IF ( ok_soil_carbon_discretization .AND. ok_soil_carbon_discretization_write ) THEN |
|---|
| 3289 | |
|---|
| 3290 | ! NOTE: This is currently working only for calendrier with 365days |
|---|
| 3291 | ! and not for gregorian calendrier, see ticket 550 |
|---|
| 3292 | sf_time = MODULO(REAL(days_since_beg,r_std)-1,one_year*REAL(nbyear,r_std)) |
|---|
| 3293 | iatt=FLOOR(sf_time/dt_forcesoil)+1 |
|---|
| 3294 | IF ((iatt < 1) .OR. (iatt > nparan*nbyear)) THEN |
|---|
| 3295 | WRITE(numout,*) 'Error with days_since_beg=',days_since_beg |
|---|
| 3296 | WRITE(numout,*) 'Error with nbyear=',nbyear |
|---|
| 3297 | WRITE(numout,*) 'Error with nparan=',nparan |
|---|
| 3298 | WRITE(numout,*) 'Error with sf_time=',sf_time |
|---|
| 3299 | WRITE(numout,*) 'Error with dt_forcesoil=',dt_forcesoil |
|---|
| 3300 | WRITE(numout,*) 'Error with iatt=',iatt |
|---|
| 3301 | CALL ipslerr_p (3,'stomate', & |
|---|
| 3302 | & 'Error with iatt.', '', & |
|---|
| 3303 | & '(Problem with dt_forcesoil ?)') |
|---|
| 3304 | ENDIF |
|---|
| 3305 | |
|---|
| 3306 | iatt_old=iatt |
|---|
| 3307 | |
|---|
| 3308 | nforce(iatt) = nforce(iatt) + 1 |
|---|
| 3309 | som_input_2pfcforcing(:,:,:,:,iatt) = som_input_2pfcforcing(:,:,:,:,iatt) + & |
|---|
| 3310 | som_input_daily(:,:,:,:) |
|---|
| 3311 | pb_2pfcforcing(:,iatt) = pb_2pfcforcing(:,iatt) + pb_pa_daily(:) |
|---|
| 3312 | snow_2pfcforcing(:,iatt) = snow_2pfcforcing(:,iatt) + snow_daily(:) |
|---|
| 3313 | tprof_2pfcforcing(:,:,:,iatt) = tprof_2pfcforcing(:,:,:,iatt) + tdeep_daily(:,:,:) |
|---|
| 3314 | !cdk treat fbact differently so that we take the mean rate, not the mean |
|---|
| 3315 | !residence time |
|---|
| 3316 | fbact_2pfcforcing(:,:,:,iatt) = fbact_2pfcforcing(:,:,:,iatt) + decomp_rate_daily(:,:,:) |
|---|
| 3317 | hslong_2pfcforcing(:,:,:,iatt) = hslong_2pfcforcing(:,:,:,iatt) + hsdeep_daily(:,:,:) |
|---|
| 3318 | veget_max_2pfcforcing(:,:,iatt) = veget_max_2pfcforcing(:,:,iatt) + veget_max(:,:) ! no need to accum, it is fixed |
|---|
| 3319 | DO j=1,nvm |
|---|
| 3320 | rprof_2pfcforcing(:,j,iatt) = rprof_2pfcforcing(:,j,iatt) + 1./humcste(j) |
|---|
| 3321 | END DO |
|---|
| 3322 | tsurf_2pfcforcing(:,iatt) = tsurf_2pfcforcing(:,iatt) + temp_sol_daily(:) |
|---|
| 3323 | !adding two snow forcings |
|---|
| 3324 | snowdz_2pfcforcing(:,:,iatt) = snowdz_2pfcforcing(:,:,iatt) + snowdz_daily(:,:) |
|---|
| 3325 | CN_target_2pfcforcing(:,:,:,iatt) = CN_target_2pfcforcing(:,:,:,iatt) + CN_target(:,:,:) |
|---|
| 3326 | n_mineralisation_2pfcforcing(:,:,iatt) = n_mineralisation_2pfcforcing(:,:,iatt) +& |
|---|
| 3327 | n_mineralisation_d(:,:) |
|---|
| 3328 | |
|---|
| 3329 | ENDIF ! ok_soil_carbon_discretization .AND. ok_soil_carbon_discretization_write |
|---|
| 3330 | |
|---|
| 3331 | !! Reset daily variables |
|---|
| 3332 | vegstress_day(:,:) = zero |
|---|
| 3333 | litterhum_daily(:) = zero |
|---|
| 3334 | t2m_daily(:) = zero |
|---|
| 3335 | t2m_min_daily(:) = large_value |
|---|
| 3336 | tsurf_daily(:) = zero |
|---|
| 3337 | tsoil_daily(:,:) = zero |
|---|
| 3338 | precip_daily(:) = zero |
|---|
| 3339 | gpp_daily(:,:) = zero |
|---|
| 3340 | resp_maint_part(:,:,:)=zero |
|---|
| 3341 | resp_hetero_d=zero |
|---|
| 3342 | resp_hetero_litter_d=zero |
|---|
| 3343 | resp_hetero_soil_d=zero |
|---|
| 3344 | drainage_daily(:,:) = zero |
|---|
| 3345 | plant_n_uptake_daily(:,:,:)=zero |
|---|
| 3346 | atm_to_bm_daily(:,:,:)=zero |
|---|
| 3347 | leaching_daily(:,:,:)=zero |
|---|
| 3348 | emission_daily(:,:,:)=zero |
|---|
| 3349 | n_input_daily(:,:,:)=zero |
|---|
| 3350 | n_mineralisation_d(:,:)=zero |
|---|
| 3351 | tdeep_daily=zero |
|---|
| 3352 | hsdeep_daily=zero |
|---|
| 3353 | decomp_rate_daily=zero |
|---|
| 3354 | snow_daily=zero |
|---|
| 3355 | pb_pa_daily=zero |
|---|
| 3356 | temp_sol_daily=zero |
|---|
| 3357 | snowdz_daily=zero |
|---|
| 3358 | snowrho_daily=zero |
|---|
| 3359 | |
|---|
| 3360 | IF (printlev_loc >= 3) THEN |
|---|
| 3361 | WRITE(numout,*) 'stomate_main: daily processes done' |
|---|
| 3362 | ENDIF |
|---|
| 3363 | |
|---|
| 3364 | END IF ! do_slow |
|---|
| 3365 | |
|---|
| 3366 | !! Prepare module variables for slowproc |
|---|
| 3367 | ! Update some more tricky variables. co2_flux is calculates |
|---|
| 3368 | ! only once per day but it should be send every hal-hour to |
|---|
| 3369 | ! sechiba and the orchideedriver. Use the value from the |
|---|
| 3370 | ! restart file for the first 47 time steps. When stomate_lpj |
|---|
| 3371 | ! is called, the co2_flux will be recalculated and stored in |
|---|
| 3372 | ! the restart |
|---|
| 3373 | co2_flux_out(:,:)=co2_flux(:,:) |
|---|
| 3374 | fco2_lu_out(:)=fco2_lu(:) |
|---|
| 3375 | fco2_wh_out(:)=fco2_wh(:) |
|---|
| 3376 | fco2_ha_out(:)=fco2_ha(:) |
|---|
| 3377 | |
|---|
| 3378 | ! Count how many years have been passsed since the start of the |
|---|
| 3379 | ! simulation. Note that global_years is written to the restart |
|---|
| 3380 | ! files so it is cumulative since the start of the spinup. |
|---|
| 3381 | IF (LastTsYear) THEN |
|---|
| 3382 | |
|---|
| 3383 | ! Increase the years counter every LastTsYear which is the |
|---|
| 3384 | ! last sechiba time step of each year |
|---|
| 3385 | global_years = global_years + 1 |
|---|
| 3386 | |
|---|
| 3387 | END IF |
|---|
| 3388 | |
|---|
| 3389 | !! 7. Analytical spinup |
|---|
| 3390 | IF (spinup_analytic) THEN |
|---|
| 3391 | |
|---|
| 3392 | tau_CN_longterm = tau_CN_longterm + dt_sechiba/one_day |
|---|
| 3393 | |
|---|
| 3394 | !! 7.1. Update V and U at sechiba time step |
|---|
| 3395 | DO m = 2,nvm |
|---|
| 3396 | DO j = 1,kjpindex |
|---|
| 3397 | ! V <- A * V |
|---|
| 3398 | matrixV(j,m,:,:) = MATMUL(matrixA(j,m,:,:),matrixV(j,m,:,:)) |
|---|
| 3399 | ! U <- A*U + B |
|---|
| 3400 | vectorU(j,m,:) = MATMUL(matrixA(j,m,:,:),vectorU(j,m,:)) + vectorB(j,m,:) |
|---|
| 3401 | ENDDO ! loop pixels |
|---|
| 3402 | ENDDO ! loop PFTS |
|---|
| 3403 | |
|---|
| 3404 | IF (LastTsYear) THEN |
|---|
| 3405 | |
|---|
| 3406 | ! 7.2.3 Is global_years is a multiple of the period time ? |
|---|
| 3407 | ! 3.2.1 When global_years is a multiple of the spinup_period, we calculate : |
|---|
| 3408 | ! 1) the mean nbp flux over the period. This value is restarted |
|---|
| 3409 | ! 2) we solve the matrix system by Gauss Jordan method |
|---|
| 3410 | ! 3) We test if a point is at equilibrium : if yes, we mark the |
|---|
| 3411 | ! point (ok_equilibrium array) |
|---|
| 3412 | ! 4) Then we reset the matrix |
|---|
| 3413 | ! 5) We erase the carbon_stock calculated by ORCHIDEE by the one |
|---|
| 3414 | ! found by the method |
|---|
| 3415 | IF( MOD(global_years, spinup_period) == 0 ) THEN |
|---|
| 3416 | |
|---|
| 3417 | WRITE(numout,*) 'Spinup analytic : Calculate if system is in & |
|---|
| 3418 | &equlibrium. global_years=',global_years |
|---|
| 3419 | |
|---|
| 3420 | ! Tag 2.1 and ORCHIDEE 3.0 calculate an nbp (called nbp_accu) but it seems |
|---|
| 3421 | ! that this nbp is not used in any calculations neither is it written to a |
|---|
| 3422 | ! history file. Given that this version of ORCHIDEE already has two nbps and |
|---|
| 3423 | ! several related variables, it was decided not to add yet another nbp |
|---|
| 3424 | ! variable that appears to be purly diagnostic in the first place. |
|---|
| 3425 | |
|---|
| 3426 | carbon_stock(:,ibare_sechiba,:) = zero |
|---|
| 3427 | ! Prepare the matrix for the resolution |
|---|
| 3428 | ! Add a temporary matrix W which contains I-matrixV |
|---|
| 3429 | ! we should take the opposite of matrixV and add the |
|---|
| 3430 | ! identitiy : we solve (I-matrixV)*C = vectorU |
|---|
| 3431 | matrixW(:,:,:,:) = moins_un * matrixV(:,:,:,:) |
|---|
| 3432 | DO jv = 1,nbpools |
|---|
| 3433 | matrixW(:,:,jv,jv) = matrixW(:,:,jv,jv) + un |
|---|
| 3434 | ENDDO |
|---|
| 3435 | carbon_stock(:,:,:) = vectorU(:,:,:) |
|---|
| 3436 | |
|---|
| 3437 | ! Solve the linear system |
|---|
| 3438 | DO m = 2,nvm |
|---|
| 3439 | DO j = 1,kjpindex |
|---|
| 3440 | ! the solution will be stored in vectorU : so it should be |
|---|
| 3441 | ! restarted before loop over kjpindex and nvm, so we solved |
|---|
| 3442 | ! kjpindex*(nvm-1) (7,7) linear systems |
|---|
| 3443 | CALL gauss_jordan_method(nbpools,matrixW(j,m,:,:),carbon_stock(j,m,:)) |
|---|
| 3444 | ENDDO ! loop pixels |
|---|
| 3445 | ENDDO ! loop PFTS |
|---|
| 3446 | |
|---|
| 3447 | ! Reset temporary matrixW |
|---|
| 3448 | matrixW(:,:,:,:) = zero |
|---|
| 3449 | |
|---|
| 3450 | previous_stock(:,:,:) = current_stock(:,:,:) |
|---|
| 3451 | current_stock(:,:,:) = carbon_stock(:,:,:) |
|---|
| 3452 | |
|---|
| 3453 | ! The relative error is calculated over the passive carbon pool |
|---|
| 3454 | ! (sum over the pfts) over the pixel. |
|---|
| 3455 | CALL error_L1_passive(kjpindex,nvm, nbpools, current_stock, & |
|---|
| 3456 | previous_stock, veget_max, eps_carbon, carbon_eq) |
|---|
| 3457 | |
|---|
| 3458 | !! ok_equilibrium is saved, |
|---|
| 3459 | WHERE( carbon_eq(:) .AND. .NOT.(ok_equilibrium(:)) ) |
|---|
| 3460 | ok_equilibrium(:) = .TRUE. |
|---|
| 3461 | ENDWHERE |
|---|
| 3462 | |
|---|
| 3463 | IF (printlev_loc .GT. 4) THEN |
|---|
| 3464 | WRITE(numout,*) 'current_stock actif:', & |
|---|
| 3465 | current_stock(test_grid,test_pft,iactive) |
|---|
| 3466 | WRITE(numout,*) 'current_stock slow:',& |
|---|
| 3467 | current_stock(test_grid,test_pft,islow) |
|---|
| 3468 | WRITE(numout,*) 'current_stock passif:', & |
|---|
| 3469 | current_stock(test_grid,test_pft,ipassive) |
|---|
| 3470 | WRITE(numout,*) 'current_stock surface:', & |
|---|
| 3471 | current_stock(test_grid,test_pft,isurface) |
|---|
| 3472 | END IF |
|---|
| 3473 | |
|---|
| 3474 | ! Reset matrixV for the pixel to the identity matrix and vectorU to zero |
|---|
| 3475 | matrixV(:,:,:,:) = zero |
|---|
| 3476 | vectorU(:,:,:) = zero |
|---|
| 3477 | DO jv = 1,nbpools |
|---|
| 3478 | matrixV(:,:,jv,jv) = un |
|---|
| 3479 | END DO |
|---|
| 3480 | |
|---|
| 3481 | IF (printlev >= 2) WRITE(numout,*) 'Reset for matrixV and VectorU done' |
|---|
| 3482 | |
|---|
| 3483 | !! Write the values found in the standard outputs of ORCHIDEE |
|---|
| 3484 | litter(:,istructural,:,iabove,icarbon) = carbon_stock(:,:,istructural_above) |
|---|
| 3485 | litter(:,istructural,:,ibelow,icarbon) = carbon_stock(:,:,istructural_below) |
|---|
| 3486 | litter(:,imetabolic,:,iabove,icarbon) = carbon_stock(:,:,imetabolic_above) |
|---|
| 3487 | litter(:,imetabolic,:,ibelow,icarbon) = carbon_stock(:,:,imetabolic_below) |
|---|
| 3488 | litter(:,iwoody,:,iabove,icarbon) = carbon_stock(:,:,iwoody_above) |
|---|
| 3489 | litter(:,iwoody,:,ibelow,icarbon) = carbon_stock(:,:,iwoody_below) |
|---|
| 3490 | som(:,iactive,:,icarbon) = carbon_stock(:,:,iactive_pool) |
|---|
| 3491 | som(:,isurface,:,icarbon) = carbon_stock(:,:,isurface_pool) |
|---|
| 3492 | som(:,islow,:,icarbon) = carbon_stock(:,:,islow_pool) |
|---|
| 3493 | som(:,ipassive,:,icarbon) = carbon_stock(:,:,ipassive_pool) |
|---|
| 3494 | |
|---|
| 3495 | WHERE( CN_som_litter_longterm(:,:,istructural_above) .GT. min_stomate) |
|---|
| 3496 | litter(:,istructural,:,iabove,initrogen) = & |
|---|
| 3497 | litter(:,istructural,:,iabove,icarbon) & |
|---|
| 3498 | / CN_som_litter_longterm(:,:,istructural_above) |
|---|
| 3499 | ENDWHERE |
|---|
| 3500 | |
|---|
| 3501 | WHERE( CN_som_litter_longterm(:,:,istructural_below) .GT. min_stomate) |
|---|
| 3502 | litter(:,istructural,:,ibelow,initrogen) = & |
|---|
| 3503 | litter(:,istructural,:,ibelow,icarbon) & |
|---|
| 3504 | / CN_som_litter_longterm(:,:,istructural_below) |
|---|
| 3505 | ENDWHERE |
|---|
| 3506 | |
|---|
| 3507 | WHERE( CN_som_litter_longterm(:,:,imetabolic_above) .GT. min_stomate) |
|---|
| 3508 | litter(:,imetabolic,:,iabove,initrogen) = & |
|---|
| 3509 | litter(:,imetabolic,:,iabove,icarbon) & |
|---|
| 3510 | / CN_som_litter_longterm(:,:,imetabolic_above) |
|---|
| 3511 | ENDWHERE |
|---|
| 3512 | |
|---|
| 3513 | WHERE( CN_som_litter_longterm(:,:,imetabolic_below) .GT. min_stomate) |
|---|
| 3514 | litter(:,imetabolic,:,ibelow,initrogen) = & |
|---|
| 3515 | litter(:,imetabolic,:,ibelow,icarbon) & |
|---|
| 3516 | / CN_som_litter_longterm(:,:,imetabolic_below) |
|---|
| 3517 | ENDWHERE |
|---|
| 3518 | |
|---|
| 3519 | WHERE( CN_som_litter_longterm(:,:,iwoody_above) .GT. min_stomate) |
|---|
| 3520 | litter(:,iwoody,:,iabove,initrogen) = & |
|---|
| 3521 | litter(:,iwoody,:,iabove,icarbon) & |
|---|
| 3522 | / CN_som_litter_longterm(:,:,iwoody_above) |
|---|
| 3523 | ENDWHERE |
|---|
| 3524 | |
|---|
| 3525 | WHERE( CN_som_litter_longterm(:,:,iwoody_below) .GT. min_stomate) |
|---|
| 3526 | litter(:,iwoody,:,ibelow,initrogen) = & |
|---|
| 3527 | litter(:,iwoody,:,ibelow,icarbon) & |
|---|
| 3528 | / CN_som_litter_longterm(:,:,iwoody_below) |
|---|
| 3529 | ENDWHERE |
|---|
| 3530 | |
|---|
| 3531 | WHERE(CN_som_litter_longterm(:,:,iactive_pool) .GT. min_stomate) |
|---|
| 3532 | som(:,iactive,:,initrogen) = & |
|---|
| 3533 | som(:,iactive,:,icarbon) & |
|---|
| 3534 | / CN_som_litter_longterm(:,:,iactive_pool) |
|---|
| 3535 | ENDWHERE |
|---|
| 3536 | |
|---|
| 3537 | WHERE(CN_som_litter_longterm(:,:,isurface_pool) .GT. min_stomate) |
|---|
| 3538 | som(:,isurface,:,initrogen) = & |
|---|
| 3539 | som(:,isurface,:,icarbon) & |
|---|
| 3540 | / CN_som_litter_longterm(:,:,isurface_pool) |
|---|
| 3541 | ENDWHERE |
|---|
| 3542 | |
|---|
| 3543 | WHERE(CN_som_litter_longterm(:,:,islow_pool) .GT. min_stomate) |
|---|
| 3544 | som(:,islow,:,initrogen) = & |
|---|
| 3545 | som(:,islow,:,icarbon) & |
|---|
| 3546 | / CN_som_litter_longterm(:,:,islow_pool) |
|---|
| 3547 | ENDWHERE |
|---|
| 3548 | |
|---|
| 3549 | WHERE(CN_som_litter_longterm(:,:,ipassive_pool) .GT. min_stomate) |
|---|
| 3550 | som(:,ipassive,:,initrogen) = & |
|---|
| 3551 | som(:,ipassive,:,icarbon) & |
|---|
| 3552 | / CN_som_litter_longterm(:,:,ipassive_pool) |
|---|
| 3553 | ENDWHERE |
|---|
| 3554 | |
|---|
| 3555 | CN_som_litter_longterm(:,:,:) = zero |
|---|
| 3556 | tau_CN_longterm = dt_sechiba/one_day |
|---|
| 3557 | ! Final step, test if all points at the local domain are at equilibrium |
|---|
| 3558 | ! The simulation can be stopped when all local domains have |
|---|
| 3559 | ! reached the equilibrium |
|---|
| 3560 | IF (printlev >=1) THEN |
|---|
| 3561 | IF (ALL(ok_equilibrium)) THEN |
|---|
| 3562 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon & |
|---|
| 3563 | &pools is reached for current local domain' |
|---|
| 3564 | ELSE |
|---|
| 3565 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon & |
|---|
| 3566 | &pools is not yet reached for current local domain' |
|---|
| 3567 | END IF |
|---|
| 3568 | END IF |
|---|
| 3569 | |
|---|
| 3570 | ENDIF ! ( MOD(global_years,spinup_period) == 0) |
|---|
| 3571 | |
|---|
| 3572 | ENDIF ! (LastTsYear) |
|---|
| 3573 | |
|---|
| 3574 | ENDIF !(spinup_analytic) |
|---|
| 3575 | |
|---|
| 3576 | !! Consistency cross-checking (in stomate_lpj.f90) |
|---|
| 3577 | IF (do_slow .AND. spinup_analytic .AND. LastTsYear .AND. & |
|---|
| 3578 | MOD(global_years, spinup_period) .EQ. 0) THEN |
|---|
| 3579 | |
|---|
| 3580 | ! During this time step soil carbon was recalculated by |
|---|
| 3581 | ! making use of the analytical spinup. This recalculation |
|---|
| 3582 | ! violates mass conservation. Cross-checks will thus fail. |
|---|
| 3583 | ! Recalculate nbp_accu_flux and nbp_pool_start. |
|---|
| 3584 | CALL calculate_nbp_pool(kjpindex, veget_max, litter, deepSOM_a, & |
|---|
| 3585 | deepSOM_s, deepSOM_p, zf_soil, som, bm_to_litter, & |
|---|
| 3586 | turnover_daily, circ_class_biomass, circ_class_n, & |
|---|
| 3587 | harvest_pool_acc, prod_s, prod_m, prod_l, soil_n_min, & |
|---|
| 3588 | n_fungivores, nbp_pool_start) |
|---|
| 3589 | |
|---|
| 3590 | ! Make sure that at the next time step the cross-check starts |
|---|
| 3591 | ! with the pools as updated in the spinup |
|---|
| 3592 | nbp_accu_flux(:,:) = nbp_pool_start(:,:) |
|---|
| 3593 | |
|---|
| 3594 | END IF ! do_slow |
|---|
| 3595 | |
|---|
| 3596 | ! Error checking |
|---|
| 3597 | IF(err_act.GT.1)THEN |
|---|
| 3598 | |
|---|
| 3599 | ! All initial checks should be done in slowproc right after the map |
|---|
| 3600 | ! is being read. If vegetation fractions or frac_nobio is adjusted |
|---|
| 3601 | ! afterwards, mass balance problems are unavoidable. Check whether |
|---|
| 3602 | ! veget_max and frac_nobio are still consistent. |
|---|
| 3603 | |
|---|
| 3604 | ! Quality check. It is still expected that the different vegetation |
|---|
| 3605 | ! fractions in each pixel sums up to exactly one. |
|---|
| 3606 | CALL check_pixel_area("End of stomate", kjpindex, veget_max, frac_nobio) |
|---|
| 3607 | |
|---|
| 3608 | ! Note that the other check can only be performed the day of the change |
|---|
| 3609 | |
|---|
| 3610 | END IF ! err_act.GT.1 |
|---|
| 3611 | |
|---|
| 3612 | IF (printlev >= 4) WRITE(numout,*) 'Leaving stomate_main' |
|---|
| 3613 | |
|---|
| 3614 | END SUBROUTINE stomate_main |
|---|
| 3615 | |
|---|
| 3616 | !! ================================================================================================================================ |
|---|
| 3617 | !! SUBROUTINE : stomate_finalize |
|---|
| 3618 | !! |
|---|
| 3619 | !>\BRIEF Write variables to restart file |
|---|
| 3620 | !! |
|---|
| 3621 | !! DESCRIPTION : Write variables to restart file |
|---|
| 3622 | !! RECENT CHANGE(S) : None |
|---|
| 3623 | !! |
|---|
| 3624 | !! MAIN OUTPUT VARIABLE(S): |
|---|
| 3625 | !! |
|---|
| 3626 | !! REFERENCES : |
|---|
| 3627 | !! |
|---|
| 3628 | !! \n |
|---|
| 3629 | !_ ================================================================================================================================ |
|---|
| 3630 | |
|---|
| 3631 | SUBROUTINE stomate_finalize (kjit, kjpindex, index, clay, silt, bulk, assim_param , & |
|---|
| 3632 | heat_Zimov, altmax, depth_organic_soil, circ_class_biomass, circ_class_n, & |
|---|
| 3633 | lai_per_level, laieff_fit) |
|---|
| 3634 | |
|---|
| 3635 | IMPLICIT NONE |
|---|
| 3636 | |
|---|
| 3637 | !! 0. Variable and parameter declaration |
|---|
| 3638 | !! 0.1 Input variables |
|---|
| 3639 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 3640 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 3641 | INTEGER(i_std),DIMENSION(:),INTENT(in) :: index !! Indices of the terrestrial pixels only (unitless) |
|---|
| 3642 | REAL(r_std),DIMENSION(:),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 3643 | REAL(r_std),DIMENSION(:),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 3644 | REAL(r_std),DIMENSION(:),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 3645 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 3646 | !! photosynthesis |
|---|
| 3647 | REAL(r_std), DIMENSION(:,:,:,:,:), INTENT(in) :: circ_class_biomass!! Biomass components of the model tree |
|---|
| 3648 | !! within a circumference class |
|---|
| 3649 | !! class @tex $(g C ind^{-1})$ @endtex |
|---|
| 3650 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: circ_class_n !! Number of trees within each circumference |
|---|
| 3651 | |
|---|
| 3652 | !! class @tex $(m^{-2})$ @endtex |
|---|
| 3653 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 3654 | !! @tex $(m^{2} m^{-2})$ |
|---|
| 3655 | TYPE(laieff_type),DIMENSION (:,:,:),INTENT(in) :: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 3656 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: heat_Zimov !! heating associated with decomposition [W/m**3 soil] |
|---|
| 3657 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: altmax !! Maximul active layer thickness (m). Be careful, here active means non frozen. |
|---|
| 3658 | !! Not related with the active soil carbon pool. |
|---|
| 3659 | REAL(r_std), DIMENSION(:), INTENT(in) :: depth_organic_soil !! Depth at which there is still organic matter (m) |
|---|
| 3660 | |
|---|
| 3661 | !! 0.2 Modified variables |
|---|
| 3662 | |
|---|
| 3663 | !! 0.4 Local variables |
|---|
| 3664 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 3665 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 3666 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 3667 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 3668 | REAL(r_std),DIMENSION(0:nslm) :: z_soil !! Variable to store depth of the different soil layers (m) |
|---|
| 3669 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 3670 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 3671 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 3672 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 3673 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 3674 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 3675 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 3676 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Maximum rate of carboxylation |
|---|
| 3677 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 3678 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 3679 | !! (0-1, unitless) |
|---|
| 3680 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 3681 | !! respiration, above and below (0-1, unitless) |
|---|
| 3682 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 3683 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time |
|---|
| 3684 | !! step |
|---|
| 3685 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 3686 | INTEGER(i_std) :: direct !! ?? |
|---|
| 3687 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 3688 | !! used by ORCHIDEE |
|---|
| 3689 | |
|---|
| 3690 | |
|---|
| 3691 | !_ ================================================================================================================================ |
|---|
| 3692 | |
|---|
| 3693 | !! 1. Write restart file for stomate |
|---|
| 3694 | IF (printlev>=3) WRITE (numout,*) 'Write restart file for STOMATE' |
|---|
| 3695 | |
|---|
| 3696 | CALL writerestart & |
|---|
| 3697 | (kjpindex, index, & |
|---|
| 3698 | dt_days, days_since_beg, & |
|---|
| 3699 | adapted, regenerate, & |
|---|
| 3700 | vegstress_day, gdd_init_date, litterhum_daily, & |
|---|
| 3701 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 3702 | precip_daily, & |
|---|
| 3703 | gpp_daily, npp_daily, turnover_daily, turnover_resid, & |
|---|
| 3704 | vegstress_month, vegstress_week, vegstress_season, & |
|---|
| 3705 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 3706 | tsoil_month, fireindex, firelitter, & |
|---|
| 3707 | maxvegstress_lastyear, maxvegstress_thisyear, & |
|---|
| 3708 | minvegstress_lastyear, minvegstress_thisyear, & |
|---|
| 3709 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 3710 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 3711 | precip_lastyear, precip_thisyear, & |
|---|
| 3712 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 3713 | PFTpresent, npp_longterm, croot_longterm, n_reserve_longterm, & |
|---|
| 3714 | lm_lastyearmax, lm_thisyearmax, & |
|---|
| 3715 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 3716 | turnover_longterm, gpp_week, resp_maint_part, resp_maint_week, & |
|---|
| 3717 | leaf_age, leaf_frac, leaf_age_crit, & |
|---|
| 3718 | plant_status, when_growthinit, age, & |
|---|
| 3719 | resp_hetero_d, resp_maint_d, resp_growth_d, & |
|---|
| 3720 | co2_fire, atm_to_bm, & |
|---|
| 3721 | veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 3722 | time_hum_min, hum_min_dormance, & |
|---|
| 3723 | litter, dead_leaves, & |
|---|
| 3724 | som, lignin_struc, lignin_wood,turnover_time,& |
|---|
| 3725 | co2_flux, fco2_lu, fco2_wh, fco2_ha, & |
|---|
| 3726 | prod_s, prod_m, prod_l, & |
|---|
| 3727 | flux_s, flux_m, flux_l, & |
|---|
| 3728 | fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 3729 | bm_to_litter, bm_to_litter_resid, tree_bm_to_litter, & |
|---|
| 3730 | tree_bm_to_litter_resid, carb_mass_total, & |
|---|
| 3731 | Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 3732 | Tmin_spring_time, & |
|---|
| 3733 | global_years, ok_equilibrium, nbp_accu_flux, & |
|---|
| 3734 | nbp_pool_start, & |
|---|
| 3735 | matrixV, vectorU, previous_stock, current_stock, & |
|---|
| 3736 | assim_param, CN_som_litter_longterm, & |
|---|
| 3737 | tau_CN_longterm, KF, k_latosa_adapt, rue_longterm, & |
|---|
| 3738 | cn_leaf_min_season, & |
|---|
| 3739 | nstress_season, soil_n_min, p_O2, bact, & |
|---|
| 3740 | forest_managed, & |
|---|
| 3741 | species_change_map, fm_change_map, lpft_replant, lai_per_level, & |
|---|
| 3742 | laieff_fit, wstress_season, wstress_month, & |
|---|
| 3743 | age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 3744 | previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 3745 | light_tran_to_floor_season, daylight_count, gap_area_save, & |
|---|
| 3746 | deepSOM_a, deepSOM_s, deepSOM_p, O2_soil, CH4_soil, O2_snow, CH4_snow, & |
|---|
| 3747 | heat_Zimov, altmax, depth_organic_soil, fixed_cryoturbation_depth, & |
|---|
| 3748 | sugar_load, harvest_cut, & |
|---|
| 3749 | harvest_pool_acc, harvest_area_acc, burried_litter, burried_fresh_ltr, & |
|---|
| 3750 | burried_fresh_som, burried_bact, burried_fungivores, & |
|---|
| 3751 | burried_min_nitro, burried_som, & |
|---|
| 3752 | burried_deepSOM_a, burried_deepSOM_s, burried_deepSOM_p,& |
|---|
| 3753 | wood_leftover_legacy,beetle_pop_legacy,season_drought_legacy,& |
|---|
| 3754 | risk_index_legacy, beetle_diapause, sumTeff, & |
|---|
| 3755 | beetle_generation_index, beetle_damage_legacy, beetle_flyaway, & |
|---|
| 3756 | epidemic,is_storm, count_storm, & |
|---|
| 3757 | biomass_init_drought, kill_vessels, & |
|---|
| 3758 | vessel_loss_previous,grow_season_len, doy_start_gs, doy_end_gs, & |
|---|
| 3759 | mean_start_gs, total_ba_init) |
|---|
| 3760 | |
|---|
| 3761 | |
|---|
| 3762 | !! 3. Collect variables that force the soil processes in stomate |
|---|
| 3763 | |
|---|
| 3764 | !! Write the soil carbon forcing file |
|---|
| 3765 | IF ( ok_soil_carbon_discretization .AND. ok_soil_carbon_discretization_write ) THEN |
|---|
| 3766 | WRITE(numout,*) & |
|---|
| 3767 | 'stomate: writing the forcing file for permafrost carbon spinup' |
|---|
| 3768 | ! |
|---|
| 3769 | DO iatt = 1, nparan*nbyear |
|---|
| 3770 | IF ( nforce(iatt) > 0 ) THEN |
|---|
| 3771 | som_input_2pfcforcing(:,:,:,:,iatt) = & |
|---|
| 3772 | som_input_2pfcforcing(:,:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3773 | pb_2pfcforcing(:,iatt) = & |
|---|
| 3774 | pb_2pfcforcing(:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3775 | snow_2pfcforcing(:,iatt) = & |
|---|
| 3776 | snow_2pfcforcing(:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3777 | tprof_2pfcforcing(:,:,:,iatt) = & |
|---|
| 3778 | tprof_2pfcforcing(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3779 | fbact_2pfcforcing(:,:,:,iatt) = & |
|---|
| 3780 | 1./(fbact_2pfcforcing(:,:,:,iatt)/REAL(nforce(iatt),r_std)) |
|---|
| 3781 | !!!cdk invert this so we take the mean decomposition rate rather than the mean |
|---|
| 3782 | !residence time |
|---|
| 3783 | hslong_2pfcforcing(:,:,:,iatt) = & |
|---|
| 3784 | hslong_2pfcforcing(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3785 | veget_max_2pfcforcing(:,:,iatt) = & |
|---|
| 3786 | veget_max_2pfcforcing(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3787 | rprof_2pfcforcing(:,:,iatt) = & |
|---|
| 3788 | rprof_2pfcforcing(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3789 | tsurf_2pfcforcing(:,iatt) = & |
|---|
| 3790 | tsurf_2pfcforcing(:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3791 | ! Adding another two snow forcing |
|---|
| 3792 | snowdz_2pfcforcing(:,:,iatt) = & |
|---|
| 3793 | snowdz_2pfcforcing(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3794 | snowrho_2pfcforcing(:,:,iatt) = & |
|---|
| 3795 | snowrho_2pfcforcing(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3796 | CN_target_2pfcforcing(:,:,:,iatt) = & |
|---|
| 3797 | CN_target_2pfcforcing(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3798 | n_mineralisation_2pfcforcing(:,:,iatt) = & |
|---|
| 3799 | n_mineralisation_2pfcforcing(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3800 | ELSE |
|---|
| 3801 | WRITE(numout,*) & |
|---|
| 3802 | & 'We have no soil carbon forcing data for this time step:', & |
|---|
| 3803 | & iatt |
|---|
| 3804 | WRITE(numout,*) ' -> we set them to zero' |
|---|
| 3805 | !soilcarbon_input(:,:,:,iatt) = zero |
|---|
| 3806 | !control_moist(:,:,iatt) = zero |
|---|
| 3807 | !control_temp(:,:,iatt) = zero |
|---|
| 3808 | som_input_2pfcforcing(:,:,:,:,iatt) = zero |
|---|
| 3809 | pb_2pfcforcing(:,iatt) = zero |
|---|
| 3810 | snow_2pfcforcing(:,iatt) = zero |
|---|
| 3811 | tprof_2pfcforcing(:,:,:,iatt) = zero |
|---|
| 3812 | fbact_2pfcforcing(:,:,:,iatt) = zero |
|---|
| 3813 | hslong_2pfcforcing(:,:,:,iatt) = zero |
|---|
| 3814 | veget_max_2pfcforcing(:,:,iatt) = zero |
|---|
| 3815 | rprof_2pfcforcing(:,:,iatt) = zero |
|---|
| 3816 | tsurf_2pfcforcing(:,iatt) = zero |
|---|
| 3817 | snowdz_2pfcforcing(:,:,iatt) = zero |
|---|
| 3818 | snowrho_2pfcforcing(:,:,iatt) = zero |
|---|
| 3819 | CN_target_2pfcforcing(:,:,:,iatt) = zero |
|---|
| 3820 | n_mineralisation_2pfcforcing(:,:,iatt) = zero |
|---|
| 3821 | ENDIF |
|---|
| 3822 | ENDDO |
|---|
| 3823 | |
|---|
| 3824 | IF (printlev >=3) WRITE (numout,*) 'Create Cforcing file : ',TRIM(Cforcing_discretization_name) |
|---|
| 3825 | CALL stomate_io_soil_carbon_discretization_write( Cforcing_discretization_name, & |
|---|
| 3826 | nbp_glo, nbp_mpi_para_begin(mpi_rank), nbp_mpi_para(mpi_rank), nparan, & |
|---|
| 3827 | nbyear, index_g, & |
|---|
| 3828 | clay, depth_organic_soil, lalo, & |
|---|
| 3829 | snowdz_2pfcforcing, snowrho_2pfcforcing, som_input_2pfcforcing, & |
|---|
| 3830 | tsurf_2pfcforcing, pb_2pfcforcing, snow_2pfcforcing, & |
|---|
| 3831 | tprof_2pfcforcing, fbact_2pfcforcing, veget_max_2pfcforcing, & |
|---|
| 3832 | rprof_2pfcforcing, hslong_2pfcforcing, CN_target_2pfcforcing, & |
|---|
| 3833 | n_mineralisation_2pfcforcing) |
|---|
| 3834 | |
|---|
| 3835 | ENDIF ! ok_soil_carbon_discretization .AND. ok_soil_carbon_discretization_write |
|---|
| 3836 | |
|---|
| 3837 | END SUBROUTINE stomate_finalize |
|---|
| 3838 | |
|---|
| 3839 | |
|---|
| 3840 | !! ================================================================================================================================ |
|---|
| 3841 | !! SUBROUTINE : stomate_init |
|---|
| 3842 | !! |
|---|
| 3843 | !>\BRIEF The routine is called only at the first simulation. At that |
|---|
| 3844 | !! time settings and flags are read and checked for internal consistency and |
|---|
| 3845 | !! memory is allocated for the variables in stomate. |
|---|
| 3846 | !! |
|---|
| 3847 | !! DESCRIPTION : The routine reads the |
|---|
| 3848 | !! following flags from the run definition file: |
|---|
| 3849 | !! -ipd (index of grid point for online diagnostics)\n |
|---|
| 3850 | !! -ok_herbivores (flag to activate herbivores)\n |
|---|
| 3851 | !! -treat_expansion (flag to activate PFT expansion across a pixel\n |
|---|
| 3852 | !! -harvest_agri (flag to harvest aboveground biomass from agricultural PFTs)\n |
|---|
| 3853 | !! \n |
|---|
| 3854 | !! Check for inconsistent setting between the following flags: |
|---|
| 3855 | !! -ok_stomate\n |
|---|
| 3856 | !! -ok_dgvm\n |
|---|
| 3857 | !! \n |
|---|
| 3858 | !! Memory is allocated for all the variables of stomate and new indexing tables |
|---|
| 3859 | !! are build. New indexing tables are needed because a single pixel can conatin |
|---|
| 3860 | !! several PFTs. The new indexing tables have separate indices for the different |
|---|
| 3861 | !! PFTs. Similar index tables are build for land use cover change.\n |
|---|
| 3862 | !! \n |
|---|
| 3863 | !! Several global variables and land cover change variables are initialized to |
|---|
| 3864 | !! zero.\n |
|---|
| 3865 | !! |
|---|
| 3866 | !! RECENT CHANGE(S) : None |
|---|
| 3867 | !! |
|---|
| 3868 | !! MAIN OUTPUT VARIABLE(S): Strictly speaking the subroutine has no output |
|---|
| 3869 | !! variables. However, the routine allocates memory and builds new indexing |
|---|
| 3870 | !! variables for later use.\n |
|---|
| 3871 | !! |
|---|
| 3872 | !! REFERENCE(S) : None |
|---|
| 3873 | !! |
|---|
| 3874 | !! FLOWCHART : None |
|---|
| 3875 | !! \n |
|---|
| 3876 | !_ ================================================================================================================================ |
|---|
| 3877 | |
|---|
| 3878 | SUBROUTINE stomate_init & |
|---|
| 3879 | & (kjpij, kjpindex, index, lalo, & |
|---|
| 3880 | & rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 3881 | |
|---|
| 3882 | !! 0. Variable and parameter declaration |
|---|
| 3883 | |
|---|
| 3884 | !! 0.1 Input variables |
|---|
| 3885 | |
|---|
| 3886 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid, including |
|---|
| 3887 | !! oceans (unitless) |
|---|
| 3888 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - number of terrestrial pixels |
|---|
| 3889 | !! (unitless) |
|---|
| 3890 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier |
|---|
| 3891 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier |
|---|
| 3892 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 3893 | INTEGER(i_std),DIMENSION(:),INTENT(in) :: index !! Indices of the terrestrial pixels on the global |
|---|
| 3894 | !! map |
|---|
| 3895 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: lalo !! Geogr. coordinates (latitude,longitude) (degrees) |
|---|
| 3896 | |
|---|
| 3897 | !! 0.2 Output variables |
|---|
| 3898 | |
|---|
| 3899 | !! 0.3 Modified variables |
|---|
| 3900 | |
|---|
| 3901 | !! 0.4 Local variables |
|---|
| 3902 | |
|---|
| 3903 | LOGICAL :: l_error !! Check errors in netcdf call |
|---|
| 3904 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 3905 | INTEGER(i_std) :: ji,j,ipd,l !! Indices |
|---|
| 3906 | INTEGER(i_std) :: idia !! indices |
|---|
| 3907 | !_ ================================================================================================================================ |
|---|
| 3908 | |
|---|
| 3909 | !! 1. Online diagnostics |
|---|
| 3910 | |
|---|
| 3911 | IF ( kjpindex > 0 ) THEN |
|---|
| 3912 | !Config Key = STOMATE_DIAGPT |
|---|
| 3913 | !Config Desc = Index of grid point for online diagnostics |
|---|
| 3914 | !Config If = OK_STOMATE |
|---|
| 3915 | !Config Def = 1 |
|---|
| 3916 | !Config Help = This is the index of the grid point which |
|---|
| 3917 | ! will be used for online diagnostics. |
|---|
| 3918 | !Config Units = [-] |
|---|
| 3919 | ! By default ::ipd is set to 1 |
|---|
| 3920 | ipd = 1 |
|---|
| 3921 | ! Get ::ipd from run definition file |
|---|
| 3922 | CALL getin_p('STOMATE_DIAGPT',ipd) |
|---|
| 3923 | ipd = MIN( ipd, kjpindex ) |
|---|
| 3924 | IF ( printlev >=3 ) THEN |
|---|
| 3925 | WRITE(numout,*) 'Stomate: ' |
|---|
| 3926 | WRITE(numout,*) ' Index of grid point for online diagnostics: ',ipd |
|---|
| 3927 | WRITE(numout,*) ' Lon, lat:',lalo(ipd,2),lalo(ipd,1) |
|---|
| 3928 | WRITE(numout,*) ' Index of this point on GCM grid: ',index(ipd) |
|---|
| 3929 | END IF |
|---|
| 3930 | ENDIF |
|---|
| 3931 | |
|---|
| 3932 | IF (ok_wlsk) WRITE(numout,*) ' Lon, lat:',lalo(ipd,2),lalo(ipd,1) |
|---|
| 3933 | |
|---|
| 3934 | !! 2. Check consistency of flags |
|---|
| 3935 | |
|---|
| 3936 | IF ( ( .NOT. ok_stomate ) .AND. ok_dgvm ) THEN |
|---|
| 3937 | WRITE(numout,*) 'Cannot do dynamical vegetation without STOMATE.' |
|---|
| 3938 | WRITE(numout,*) 'Inconsistency between ::ok_stomate and ::ok_dgvm' |
|---|
| 3939 | WRITE(numout,*) 'Stop: fatal error' |
|---|
| 3940 | STOP |
|---|
| 3941 | ENDIF |
|---|
| 3942 | |
|---|
| 3943 | IF (printlev >=2) THEN |
|---|
| 3944 | WRITE(numout,*) 'stomate first call - overview of the activated flags:' |
|---|
| 3945 | WRITE(numout,*) ' STOMATE: ', ok_stomate |
|---|
| 3946 | WRITE(numout,*) ' LPJ: ', ok_dgvm |
|---|
| 3947 | END IF |
|---|
| 3948 | |
|---|
| 3949 | !! 4. Allocate memory for STOMATE's variables |
|---|
| 3950 | |
|---|
| 3951 | l_error = .FALSE. |
|---|
| 3952 | |
|---|
| 3953 | ALLOCATE(adapted(kjpindex,nvm),stat=ier) |
|---|
| 3954 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3955 | IF (l_error) THEN |
|---|
| 3956 | WRITE(numout,*) 'Memory allocation error for adapted. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3957 | STOP 'stomate_init' |
|---|
| 3958 | ENDIF |
|---|
| 3959 | |
|---|
| 3960 | ALLOCATE(regenerate(kjpindex,nvm),stat=ier) |
|---|
| 3961 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3962 | IF (l_error) THEN |
|---|
| 3963 | WRITE(numout,*) 'Memory allocation error for regenerate. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3964 | STOP 'stomate_init' |
|---|
| 3965 | ENDIF |
|---|
| 3966 | |
|---|
| 3967 | ALLOCATE(vegstress_day(kjpindex,nvm),stat=ier) |
|---|
| 3968 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3969 | IF (l_error) THEN |
|---|
| 3970 | WRITE(numout,*) 'Memory allocation error for vegstress_day. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3971 | STOP 'stomate_init' |
|---|
| 3972 | ENDIF |
|---|
| 3973 | |
|---|
| 3974 | ALLOCATE(stressed_daily(kjpindex,nvm),stat=ier) |
|---|
| 3975 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3976 | IF (l_error) THEN |
|---|
| 3977 | WRITE(numout,*) 'Memory allocation error for stressed_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3978 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 3979 | ENDIF |
|---|
| 3980 | stressed_daily = zero |
|---|
| 3981 | |
|---|
| 3982 | ALLOCATE(unstressed_daily(kjpindex,nvm),stat=ier) |
|---|
| 3983 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3984 | IF (l_error) THEN |
|---|
| 3985 | WRITE(numout,*) 'Memory allocation error for unstressed_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3986 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 3987 | ENDIF |
|---|
| 3988 | unstressed_daily(:,:) = zero |
|---|
| 3989 | |
|---|
| 3990 | ALLOCATE(biomass_init_drought(kjpindex,nvm,ncirc,nparts,nelements),stat=ier) |
|---|
| 3991 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3992 | IF (l_error) THEN |
|---|
| 3993 | WRITE(numout,*) 'Memory allocation error for biomass_init_drought. We stop. We need kjpindex*nvm*ncirc*nparts*nelements words',kjpindex,nvm,ncirc,nparts,nelements |
|---|
| 3994 | CALL ipslerr_p (3, 'stomate_init', 'Memory allocation issue','','') |
|---|
| 3995 | ENDIF |
|---|
| 3996 | |
|---|
| 3997 | ALLOCATE(kill_vessels(kjpindex,nvm),stat=ier) |
|---|
| 3998 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3999 | IF (l_error) THEN |
|---|
| 4000 | WRITE(numout,*) 'Memory allocation error for kill_vessels. We stop. We need kjpindex*nvm words.',kjpindex,nvm |
|---|
| 4001 | STOP 'stomate_init' |
|---|
| 4002 | ENDIF |
|---|
| 4003 | |
|---|
| 4004 | ALLOCATE(vessel_loss_previous(kjpindex,nvm),stat=ier) |
|---|
| 4005 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4006 | IF (l_error) THEN |
|---|
| 4007 | WRITE(numout,*) 'Memory allocation error for vessel_loss_previous. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4008 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4009 | ENDIF |
|---|
| 4010 | |
|---|
| 4011 | ALLOCATE(vessel_loss_daily(kjpindex,nvm),stat=ier) |
|---|
| 4012 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4013 | IF (l_error) THEN |
|---|
| 4014 | WRITE(numout,*) 'Memory allocation error for vessel_loss_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4015 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4016 | ENDIF |
|---|
| 4017 | vessel_loss_daily(:,:) = zero |
|---|
| 4018 | |
|---|
| 4019 | ALLOCATE(daylight(kjpindex,nvm),stat=ier) |
|---|
| 4020 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4021 | IF (l_error) THEN |
|---|
| 4022 | WRITE(numout,*) 'Memory allocation error for daylight. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4023 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4024 | ENDIF |
|---|
| 4025 | daylight(:,:) = zero |
|---|
| 4026 | |
|---|
| 4027 | ALLOCATE(light_tran_to_floor_season(kjpindex,nvm),stat=ier) |
|---|
| 4028 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4029 | IF (l_error) THEN |
|---|
| 4030 | WRITE(numout,*) 'Memory allocation error for light_tran_to_floor_season. We stop. We need kjpindex*nvm*nlevels_tot words', & |
|---|
| 4031 | kjpindex,nvm,nlevels_tot |
|---|
| 4032 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4033 | ENDIF |
|---|
| 4034 | light_tran_to_floor_season(:,:) = zero |
|---|
| 4035 | |
|---|
| 4036 | ALLOCATE(daylight_count(kjpindex,nvm),stat=ier) |
|---|
| 4037 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4038 | IF (l_error) THEN |
|---|
| 4039 | WRITE(numout,*) 'Memory allocation error for daylight_count. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4040 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4041 | ENDIF |
|---|
| 4042 | daylight_count(:,:) = zero |
|---|
| 4043 | |
|---|
| 4044 | ALLOCATE(transpir_supply_daily(kjpindex,nvm),stat=ier) |
|---|
| 4045 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4046 | IF (l_error) THEN |
|---|
| 4047 | WRITE(numout,*) 'Memory allocation error for transpir_supply_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4048 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4049 | ENDIF |
|---|
| 4050 | transpir_supply_daily=zero |
|---|
| 4051 | |
|---|
| 4052 | ALLOCATE(vir_transpir_supply_daily(kjpindex,nvm),stat=ier) |
|---|
| 4053 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4054 | IF (l_error) THEN |
|---|
| 4055 | WRITE(numout,*) 'Memory allocation error for vir_transpir_supply_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4056 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4057 | ENDIF |
|---|
| 4058 | vir_transpir_supply_daily=zero |
|---|
| 4059 | |
|---|
| 4060 | ALLOCATE(transpir_daily(kjpindex,nvm),stat=ier) |
|---|
| 4061 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4062 | IF (l_error) THEN |
|---|
| 4063 | WRITE(numout,*) 'Memory allocation error for transpir_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4064 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4065 | ENDIF |
|---|
| 4066 | transpir_daily=zero |
|---|
| 4067 | |
|---|
| 4068 | |
|---|
| 4069 | ALLOCATE(litterhum_daily(kjpindex),stat=ier) |
|---|
| 4070 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4071 | IF (l_error) THEN |
|---|
| 4072 | WRITE(numout,*) 'Memory allocation error for litterhum_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4073 | STOP 'stomate_init' |
|---|
| 4074 | ENDIF |
|---|
| 4075 | |
|---|
| 4076 | ALLOCATE(t2m_daily(kjpindex),stat=ier) |
|---|
| 4077 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4078 | IF (l_error) THEN |
|---|
| 4079 | WRITE(numout,*) 'Memory allocation error for t2m_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4080 | STOP 'stomate_init' |
|---|
| 4081 | ENDIF |
|---|
| 4082 | |
|---|
| 4083 | ALLOCATE(t2m_min_daily(kjpindex),stat=ier) |
|---|
| 4084 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4085 | IF (l_error) THEN |
|---|
| 4086 | WRITE(numout,*) 'Memory allocation error for t2m_min_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4087 | STOP 'stomate_init' |
|---|
| 4088 | ENDIF |
|---|
| 4089 | |
|---|
| 4090 | ALLOCATE(wind_speed_daily(kjpindex),stat=ier) |
|---|
| 4091 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4092 | IF (l_error) THEN |
|---|
| 4093 | WRITE(numout,*) 'Memory allocation error for wind_speed_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4094 | STOP 'stomate_init' |
|---|
| 4095 | ENDIF |
|---|
| 4096 | |
|---|
| 4097 | ALLOCATE(max_wind_speed_storm(kjpindex),stat=ier) |
|---|
| 4098 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4099 | IF (l_error) THEN |
|---|
| 4100 | WRITE(numout,*) 'Memory allocation error for max_wind_speed_storm. We stop. We need kjpindex words',kjpindex |
|---|
| 4101 | STOP 'stomate_init' |
|---|
| 4102 | ENDIF |
|---|
| 4103 | |
|---|
| 4104 | ALLOCATE(is_storm(kjpindex),stat=ier) |
|---|
| 4105 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4106 | IF (l_error) THEN |
|---|
| 4107 | WRITE(numout,*) 'Memory allocation error for is_storm. We stop. We need kjpindex words',kjpindex |
|---|
| 4108 | STOP 'stomate_init' |
|---|
| 4109 | ENDIF |
|---|
| 4110 | |
|---|
| 4111 | ALLOCATE(count_storm(kjpindex),stat=ier) |
|---|
| 4112 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4113 | IF (l_error) THEN |
|---|
| 4114 | WRITE(numout,*) 'Memory allocation error for count_storm. We stop.We need kjpindex words',kjpindex |
|---|
| 4115 | STOP 'stomate_init' |
|---|
| 4116 | ENDIF |
|---|
| 4117 | |
|---|
| 4118 | ALLOCATE(wind_max_daily(kjpindex),stat=ier) |
|---|
| 4119 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4120 | IF (l_error) THEN |
|---|
| 4121 | WRITE(numout,*) 'Memory allocation error for wind_max_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4122 | STOP 'stomate_init' |
|---|
| 4123 | ENDIF |
|---|
| 4124 | wind_max_daily(:)=zero |
|---|
| 4125 | |
|---|
| 4126 | ALLOCATE(soil_temp_daily(kjpindex),stat=ier) |
|---|
| 4127 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4128 | IF (l_error) THEN |
|---|
| 4129 | WRITE(numout,*) 'Memory allocation error for soil_temp_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4130 | STOP 'stomate_init' |
|---|
| 4131 | ENDIF |
|---|
| 4132 | |
|---|
| 4133 | ALLOCATE(soil_max_daily(kjpindex),stat=ier) |
|---|
| 4134 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4135 | IF (l_error) THEN |
|---|
| 4136 | WRITE(numout,*) 'Memory allocation error for soil_max_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4137 | STOP 'stomate_init' |
|---|
| 4138 | ENDIF |
|---|
| 4139 | soil_max_daily(:) = zero |
|---|
| 4140 | |
|---|
| 4141 | ALLOCATE(tsurf_daily(kjpindex),stat=ier) |
|---|
| 4142 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4143 | IF (l_error) THEN |
|---|
| 4144 | WRITE(numout,*) 'Memory allocation error for tsurf_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4145 | STOP 'stomate_init' |
|---|
| 4146 | ENDIF |
|---|
| 4147 | |
|---|
| 4148 | ALLOCATE(tsoil_daily(kjpindex,nslm),stat=ier) |
|---|
| 4149 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4150 | IF (l_error) THEN |
|---|
| 4151 | WRITE(numout,*) 'Memory allocation error for tsoil_daily. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 4152 | STOP 'stomate_init' |
|---|
| 4153 | ENDIF |
|---|
| 4154 | |
|---|
| 4155 | ALLOCATE(precip_daily(kjpindex),stat=ier) |
|---|
| 4156 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4157 | IF (l_error) THEN |
|---|
| 4158 | WRITE(numout,*) 'Memory allocation error for precip_daily. We stop. We need kjpindex words',kjpindex,nvm |
|---|
| 4159 | STOP 'stomate_init' |
|---|
| 4160 | ENDIF |
|---|
| 4161 | |
|---|
| 4162 | ALLOCATE(gpp_daily(kjpindex,nvm),stat=ier) |
|---|
| 4163 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4164 | IF (l_error) THEN |
|---|
| 4165 | WRITE(numout,*) 'Memory allocation error for gpp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4166 | STOP 'stomate_init' |
|---|
| 4167 | ENDIF |
|---|
| 4168 | |
|---|
| 4169 | ALLOCATE(npp_daily(kjpindex,nvm),stat=ier) |
|---|
| 4170 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4171 | IF (l_error) THEN |
|---|
| 4172 | WRITE(numout,*) 'Memory allocation error for npp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4173 | STOP 'stomate_init' |
|---|
| 4174 | ENDIF |
|---|
| 4175 | |
|---|
| 4176 | ALLOCATE(turnover_daily(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4177 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4178 | IF (l_error) THEN |
|---|
| 4179 | WRITE(numout,*) 'Memory allocation error for turnover_daily. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4180 | & kjpindex,nvm,nparts,nelements |
|---|
| 4181 | STOP 'stomate_init' |
|---|
| 4182 | ENDIF |
|---|
| 4183 | |
|---|
| 4184 | ALLOCATE(turnover_resid(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4185 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4186 | IF (l_error) THEN |
|---|
| 4187 | WRITE(numout,*) 'Memory allocation error for turnover_resid. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4188 | & kjpindex,nvm,nparts,nelements |
|---|
| 4189 | STOP 'stomate_init' |
|---|
| 4190 | ENDIF |
|---|
| 4191 | |
|---|
| 4192 | ALLOCATE(turnover_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4193 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4194 | IF (l_error) THEN |
|---|
| 4195 | WRITE(numout,*) 'Memory allocation error for turnover_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4196 | & kjpindex,nvm,nparts,nelements |
|---|
| 4197 | STOP 'stomate_init' |
|---|
| 4198 | ENDIF |
|---|
| 4199 | |
|---|
| 4200 | ALLOCATE(vegstress_month(kjpindex,nvm),stat=ier) |
|---|
| 4201 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4202 | IF (l_error) THEN |
|---|
| 4203 | WRITE(numout,*) 'Memory allocation error for vegstress_month. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4204 | STOP 'stomate_init' |
|---|
| 4205 | ENDIF |
|---|
| 4206 | |
|---|
| 4207 | ALLOCATE(vegstress_week(kjpindex,nvm),stat=ier) |
|---|
| 4208 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4209 | IF (l_error) THEN |
|---|
| 4210 | WRITE(numout,*) 'Memory allocation error for vegstress_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4211 | STOP 'stomate_init' |
|---|
| 4212 | ENDIF |
|---|
| 4213 | |
|---|
| 4214 | ALLOCATE(vegstress_season(kjpindex,nvm),stat=ier) |
|---|
| 4215 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4216 | IF (l_error) THEN |
|---|
| 4217 | WRITE(numout,*) 'Memory allocation error for vegstress_season. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4218 | STOP 'stomate_init' |
|---|
| 4219 | ENDIF |
|---|
| 4220 | |
|---|
| 4221 | ALLOCATE(t2m_longterm(kjpindex),stat=ier) |
|---|
| 4222 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4223 | IF (l_error) THEN |
|---|
| 4224 | WRITE(numout,*) 'Memory allocation error for t2m_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4225 | STOP 'stomate_init' |
|---|
| 4226 | ENDIF |
|---|
| 4227 | |
|---|
| 4228 | ALLOCATE(t2m_month(kjpindex),stat=ier) |
|---|
| 4229 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4230 | IF (l_error) THEN |
|---|
| 4231 | WRITE(numout,*) 'Memory allocation error for t2m_month. We stop. We need kjpindex words',kjpindex |
|---|
| 4232 | STOP 'stomate_init' |
|---|
| 4233 | ENDIF |
|---|
| 4234 | |
|---|
| 4235 | ALLOCATE(Tseason(kjpindex),stat=ier) |
|---|
| 4236 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4237 | IF (l_error) THEN |
|---|
| 4238 | WRITE(numout,*) 'Memory allocation error for Tseason. We stop. We need kjpindex words',kjpindex |
|---|
| 4239 | STOP 'stomate_init' |
|---|
| 4240 | ENDIF |
|---|
| 4241 | |
|---|
| 4242 | ALLOCATE(Tseason_length(kjpindex),stat=ier) |
|---|
| 4243 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4244 | IF (l_error) THEN |
|---|
| 4245 | WRITE(numout,*) 'Memory allocation error for Tseason_length. We stop. We need kjpindex words',kjpindex |
|---|
| 4246 | STOP 'stomate_init' |
|---|
| 4247 | ENDIF |
|---|
| 4248 | |
|---|
| 4249 | ALLOCATE(Tseason_tmp(kjpindex),stat=ier) |
|---|
| 4250 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4251 | IF (l_error) THEN |
|---|
| 4252 | WRITE(numout,*) 'Memory allocation error for Tseason_tmp. We stop. We need kjpindex words',kjpindex |
|---|
| 4253 | STOP 'stomate_init' |
|---|
| 4254 | ENDIF |
|---|
| 4255 | |
|---|
| 4256 | ALLOCATE(Tmin_spring_time(kjpindex,nvm),stat=ier) |
|---|
| 4257 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4258 | IF (l_error) THEN |
|---|
| 4259 | WRITE(numout,*) 'Memory allocation error for Tmin_spring_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4260 | STOP 'stomate_init' |
|---|
| 4261 | ENDIF |
|---|
| 4262 | |
|---|
| 4263 | ALLOCATE(t2m_week(kjpindex),stat=ier) |
|---|
| 4264 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4265 | IF (l_error) THEN |
|---|
| 4266 | WRITE(numout,*) 'Memory allocation error for t2m_week. We stop. We need kjpindex words',kjpindex |
|---|
| 4267 | STOP 'stomate_init' |
|---|
| 4268 | ENDIF |
|---|
| 4269 | |
|---|
| 4270 | ALLOCATE(tsoil_month(kjpindex,nslm),stat=ier) |
|---|
| 4271 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4272 | IF (l_error) THEN |
|---|
| 4273 | WRITE(numout,*) 'Memory allocation error for tsoil_month. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 4274 | STOP 'stomate_init' |
|---|
| 4275 | ENDIF |
|---|
| 4276 | |
|---|
| 4277 | ALLOCATE(fireindex(kjpindex,nvm),stat=ier) |
|---|
| 4278 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4279 | IF (l_error) THEN |
|---|
| 4280 | WRITE(numout,*) 'Memory allocation error for fireindex. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4281 | STOP 'stomate_init' |
|---|
| 4282 | ENDIF |
|---|
| 4283 | |
|---|
| 4284 | ALLOCATE(firelitter(kjpindex,nvm),stat=ier) |
|---|
| 4285 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4286 | IF (l_error) THEN |
|---|
| 4287 | WRITE(numout,*) 'Memory allocation error for firelitter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4288 | STOP 'stomate_init' |
|---|
| 4289 | ENDIF |
|---|
| 4290 | |
|---|
| 4291 | ALLOCATE(maxvegstress_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4292 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4293 | IF (l_error) THEN |
|---|
| 4294 | WRITE(numout,*) 'Memory allocation error for maxvegstress_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4295 | STOP 'stomate_init' |
|---|
| 4296 | ENDIF |
|---|
| 4297 | |
|---|
| 4298 | ALLOCATE(maxvegstress_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4299 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4300 | IF (l_error) THEN |
|---|
| 4301 | WRITE(numout,*) 'Memory allocation error for maxvegstress_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4302 | STOP 'stomate_init' |
|---|
| 4303 | ENDIF |
|---|
| 4304 | |
|---|
| 4305 | ALLOCATE(minvegstress_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4306 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4307 | IF (l_error) THEN |
|---|
| 4308 | WRITE(numout,*) 'Memory allocation error for minvegstress_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4309 | STOP 'stomate_init' |
|---|
| 4310 | ENDIF |
|---|
| 4311 | |
|---|
| 4312 | ALLOCATE(minvegstress_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4313 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4314 | IF (l_error) THEN |
|---|
| 4315 | WRITE(numout,*) 'Memory allocation error for minvegstress_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4316 | STOP 'stomate_init' |
|---|
| 4317 | ENDIF |
|---|
| 4318 | |
|---|
| 4319 | ALLOCATE(maxgppweek_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4320 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4321 | IF (l_error) THEN |
|---|
| 4322 | WRITE(numout,*) 'Memory allocation error for maxgppweek_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4323 | STOP 'stomate_init' |
|---|
| 4324 | ENDIF |
|---|
| 4325 | |
|---|
| 4326 | ALLOCATE(maxgppweek_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4327 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4328 | IF (l_error) THEN |
|---|
| 4329 | WRITE(numout,*) 'Memory allocation error for maxgppweek_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4330 | STOP 'stomate_init' |
|---|
| 4331 | ENDIF |
|---|
| 4332 | |
|---|
| 4333 | ALLOCATE(gdd0_lastyear(kjpindex),stat=ier) |
|---|
| 4334 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4335 | IF (l_error) THEN |
|---|
| 4336 | WRITE(numout,*) 'Memory allocation error for gdd0_lastyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4337 | STOP 'stomate_init' |
|---|
| 4338 | ENDIF |
|---|
| 4339 | |
|---|
| 4340 | ALLOCATE(gdd0_thisyear(kjpindex),stat=ier) |
|---|
| 4341 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4342 | IF (l_error) THEN |
|---|
| 4343 | WRITE(numout,*) 'Memory allocation error for gdd0_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4344 | STOP 'stomate_init' |
|---|
| 4345 | ENDIF |
|---|
| 4346 | |
|---|
| 4347 | ALLOCATE(gdd_init_date(kjpindex,2),stat=ier) |
|---|
| 4348 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4349 | IF (l_error) THEN |
|---|
| 4350 | WRITE(numout,*) 'Memory allocation error for gdd_init_date. We stop. We need kjpindex*2 words',kjpindex,2 |
|---|
| 4351 | STOP 'stomate_init' |
|---|
| 4352 | ENDIF |
|---|
| 4353 | |
|---|
| 4354 | ALLOCATE(gdd_from_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 4355 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4356 | IF (l_error) THEN |
|---|
| 4357 | WRITE(numout,*) 'Memory allocation error for gdd_from_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4358 | STOP 'stomate_init' |
|---|
| 4359 | ENDIF |
|---|
| 4360 | |
|---|
| 4361 | ALLOCATE(precip_lastyear(kjpindex),stat=ier) |
|---|
| 4362 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4363 | IF (l_error) THEN |
|---|
| 4364 | WRITE(numout,*) 'Memory allocation error for precip_lastyear. We stop. We need kjpindex*nvm words',kjpindex |
|---|
| 4365 | STOP 'stomate_init' |
|---|
| 4366 | ENDIF |
|---|
| 4367 | |
|---|
| 4368 | ALLOCATE(precip_thisyear(kjpindex),stat=ier) |
|---|
| 4369 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4370 | IF (l_error) THEN |
|---|
| 4371 | WRITE(numout,*) 'Memory allocation error for precip_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4372 | STOP 'stomate_init' |
|---|
| 4373 | ENDIF |
|---|
| 4374 | |
|---|
| 4375 | ALLOCATE(gdd_m5_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4376 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4377 | IF (l_error) THEN |
|---|
| 4378 | WRITE(numout,*) 'Memory allocation error for gdd_m5_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4379 | STOP 'stomate_init' |
|---|
| 4380 | ENDIF |
|---|
| 4381 | |
|---|
| 4382 | ALLOCATE(gdd_midwinter(kjpindex,nvm),stat=ier) |
|---|
| 4383 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4384 | IF (l_error) THEN |
|---|
| 4385 | WRITE(numout,*) 'Memory allocation error for gdd_midwinter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4386 | STOP 'stomate_init' |
|---|
| 4387 | ENDIF |
|---|
| 4388 | |
|---|
| 4389 | ALLOCATE(ncd_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4390 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4391 | IF (l_error) THEN |
|---|
| 4392 | WRITE(numout,*) 'Memory allocation error for ncd_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4393 | STOP 'stomate_init' |
|---|
| 4394 | ENDIF |
|---|
| 4395 | |
|---|
| 4396 | ALLOCATE(ngd_minus5(kjpindex,nvm),stat=ier) |
|---|
| 4397 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4398 | IF (l_error) THEN |
|---|
| 4399 | WRITE(numout,*) 'Memory allocation error for ngd_minus5. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4400 | STOP 'stomate_init' |
|---|
| 4401 | ENDIF |
|---|
| 4402 | |
|---|
| 4403 | ALLOCATE(PFTpresent(kjpindex,nvm),stat=ier) |
|---|
| 4404 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4405 | IF (l_error) THEN |
|---|
| 4406 | WRITE(numout,*) 'Memory allocation error for PFTpresent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4407 | STOP 'stomate_init' |
|---|
| 4408 | ENDIF |
|---|
| 4409 | |
|---|
| 4410 | ALLOCATE(npp_longterm(kjpindex,nvm),stat=ier) |
|---|
| 4411 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4412 | IF (l_error) THEN |
|---|
| 4413 | WRITE(numout,*) 'Memory allocation error for npp_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4414 | STOP 'stomate_init' |
|---|
| 4415 | ENDIF |
|---|
| 4416 | |
|---|
| 4417 | ALLOCATE(croot_longterm(kjpindex,nvm),stat=ier) |
|---|
| 4418 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4419 | IF (l_error) THEN |
|---|
| 4420 | WRITE(numout,*) 'Memory allocation error for croot_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4421 | STOP 'stomate_init' |
|---|
| 4422 | ENDIF |
|---|
| 4423 | |
|---|
| 4424 | ALLOCATE(n_reserve_longterm(kjpindex,nvm),stat=ier) |
|---|
| 4425 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4426 | IF (l_error) THEN |
|---|
| 4427 | WRITE(numout,*) 'Memory allocation error for n_reserve_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4428 | STOP 'stomate_init' |
|---|
| 4429 | ENDIF |
|---|
| 4430 | |
|---|
| 4431 | ALLOCATE(lm_lastyearmax(kjpindex,nvm),stat=ier) |
|---|
| 4432 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4433 | IF (l_error) THEN |
|---|
| 4434 | WRITE(numout,*) 'Memory allocation error for lm_lastyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4435 | STOP 'stomate_init' |
|---|
| 4436 | ENDIF |
|---|
| 4437 | |
|---|
| 4438 | ALLOCATE(lm_thisyearmax(kjpindex,nvm),stat=ier) |
|---|
| 4439 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4440 | IF (l_error) THEN |
|---|
| 4441 | WRITE(numout,*) 'Memory allocation error for lm_thisyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4442 | STOP 'stomate_init' |
|---|
| 4443 | ENDIF |
|---|
| 4444 | |
|---|
| 4445 | ALLOCATE(maxfpc_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4446 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4447 | IF (l_error) THEN |
|---|
| 4448 | WRITE(numout,*) 'Memory allocation error for maxfpc_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4449 | STOP 'stomate_init' |
|---|
| 4450 | ENDIF |
|---|
| 4451 | |
|---|
| 4452 | ALLOCATE(maxfpc_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4453 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4454 | IF (l_error) THEN |
|---|
| 4455 | WRITE(numout,*) 'Memory allocation error for maxfpc_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4456 | STOP 'stomate_init' |
|---|
| 4457 | ENDIF |
|---|
| 4458 | |
|---|
| 4459 | ALLOCATE(turnover_longterm(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4460 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4461 | IF (l_error) THEN |
|---|
| 4462 | WRITE(numout,*) 'Memory allocation error for turnover_longterm. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4463 | & kjpindex,nvm,nparts,nelements |
|---|
| 4464 | STOP 'stomate_init' |
|---|
| 4465 | ENDIF |
|---|
| 4466 | |
|---|
| 4467 | ALLOCATE(gpp_week(kjpindex,nvm),stat=ier) |
|---|
| 4468 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4469 | IF (l_error) THEN |
|---|
| 4470 | WRITE(numout,*) 'Memory allocation error for gpp_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4471 | STOP 'stomate_init' |
|---|
| 4472 | ENDIF |
|---|
| 4473 | |
|---|
| 4474 | ALLOCATE(resp_maint_week(kjpindex,nvm),stat=ier) |
|---|
| 4475 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4476 | IF (l_error) THEN |
|---|
| 4477 | WRITE(numout,*) 'Memory allocation error for resp_maint_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4478 | STOP 'stomate_init' |
|---|
| 4479 | ENDIF |
|---|
| 4480 | |
|---|
| 4481 | ALLOCATE(plant_status(kjpindex,nvm),stat=ier) |
|---|
| 4482 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4483 | IF (l_error) THEN |
|---|
| 4484 | WRITE(numout,*) 'Memory allocation error for plant_status. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4485 | STOP 'stomate_init' |
|---|
| 4486 | ENDIF |
|---|
| 4487 | |
|---|
| 4488 | ALLOCATE(when_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 4489 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4490 | IF (l_error) THEN |
|---|
| 4491 | WRITE(numout,*) 'Memory allocation error for when_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4492 | STOP 'stomate_init' |
|---|
| 4493 | ENDIF |
|---|
| 4494 | |
|---|
| 4495 | ALLOCATE(age(kjpindex,nvm),stat=ier) |
|---|
| 4496 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4497 | IF (l_error) THEN |
|---|
| 4498 | WRITE(numout,*) 'Memory allocation error for age. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4499 | STOP 'stomate_init' |
|---|
| 4500 | ENDIF |
|---|
| 4501 | |
|---|
| 4502 | ALLOCATE(resp_hetero_d(kjpindex,nvm),stat=ier) |
|---|
| 4503 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4504 | IF (l_error) THEN |
|---|
| 4505 | WRITE(numout,*) 'Memory allocation error for resp_hetero_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4506 | STOP 'stomate_init' |
|---|
| 4507 | ENDIF |
|---|
| 4508 | |
|---|
| 4509 | ALLOCATE(resp_hetero_litter_d(kjpindex,nvm),stat=ier) |
|---|
| 4510 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4511 | IF (l_error) THEN |
|---|
| 4512 | WRITE(numout,*) 'Memory allocation error for resp_hetero_litter_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4513 | STOP 'stomate_init' |
|---|
| 4514 | ENDIF |
|---|
| 4515 | |
|---|
| 4516 | ALLOCATE(resp_hetero_soil_d(kjpindex,nvm),stat=ier) |
|---|
| 4517 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4518 | IF (l_error) THEN |
|---|
| 4519 | WRITE(numout,*) 'Memory allocation error for resp_hetero_soil_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4520 | STOP 'stomate_init' |
|---|
| 4521 | ENDIF |
|---|
| 4522 | |
|---|
| 4523 | ALLOCATE(resp_hetero_radia(kjpindex,nvm),stat=ier) |
|---|
| 4524 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4525 | IF (l_error) THEN |
|---|
| 4526 | WRITE(numout,*) 'Memory allocation error for resp_hetero_radia. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4527 | STOP 'stomate_init' |
|---|
| 4528 | ENDIF |
|---|
| 4529 | |
|---|
| 4530 | ALLOCATE(resp_maint_d(kjpindex,nvm),stat=ier) |
|---|
| 4531 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4532 | IF (l_error) THEN |
|---|
| 4533 | WRITE(numout,*) 'Memory allocation error for resp_maint_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4534 | STOP 'stomate_init' |
|---|
| 4535 | ENDIF |
|---|
| 4536 | |
|---|
| 4537 | ALLOCATE(resp_growth_d(kjpindex,nvm),stat=ier) |
|---|
| 4538 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4539 | IF (l_error) THEN |
|---|
| 4540 | WRITE(numout,*) 'Memory allocation error for resp_growth_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4541 | STOP 'stomate_init' |
|---|
| 4542 | ENDIF |
|---|
| 4543 | |
|---|
| 4544 | ALLOCATE(co2_fire(kjpindex,nvm),stat=ier) |
|---|
| 4545 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4546 | IF (l_error) THEN |
|---|
| 4547 | WRITE(numout,*) 'Memory allocation error for co2_fire. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4548 | STOP 'stomate_init' |
|---|
| 4549 | ENDIF |
|---|
| 4550 | |
|---|
| 4551 | ALLOCATE(atm_to_bm(kjpindex,nvm,nelements),stat=ier) |
|---|
| 4552 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4553 | IF (l_error) THEN |
|---|
| 4554 | WRITE(numout,*) 'Memory allocation error for atm_to_bm. We stop. We need kjpindex*nvm words',kjpindex,nvm,nelements |
|---|
| 4555 | STOP 'stomate_init' |
|---|
| 4556 | ENDIF |
|---|
| 4557 | |
|---|
| 4558 | ALLOCATE(veget_lastlight(kjpindex,nvm),stat=ier) |
|---|
| 4559 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4560 | IF (l_error) THEN |
|---|
| 4561 | WRITE(numout,*) 'Memory allocation error for veget_lastlight. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4562 | STOP 'stomate_init' |
|---|
| 4563 | ENDIF |
|---|
| 4564 | |
|---|
| 4565 | ALLOCATE(everywhere(kjpindex,nvm),stat=ier) |
|---|
| 4566 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4567 | IF (l_error) THEN |
|---|
| 4568 | WRITE(numout,*) 'Memory allocation error for everywhere. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4569 | STOP 'stomate_init' |
|---|
| 4570 | ENDIF |
|---|
| 4571 | |
|---|
| 4572 | ALLOCATE(need_adjacent(kjpindex,nvm),stat=ier) |
|---|
| 4573 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4574 | IF (l_error) THEN |
|---|
| 4575 | WRITE(numout,*) 'Memory allocation error for need_adjacent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4576 | STOP 'stomate_init' |
|---|
| 4577 | ENDIF |
|---|
| 4578 | |
|---|
| 4579 | ALLOCATE(leaf_age(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 4580 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4581 | IF (l_error) THEN |
|---|
| 4582 | WRITE(numout,*) 'Memory allocation error for leaf_age. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 4583 | & kjpindex,nvm,nleafages |
|---|
| 4584 | STOP 'stomate_init' |
|---|
| 4585 | ENDIF |
|---|
| 4586 | |
|---|
| 4587 | ALLOCATE(leaf_frac(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 4588 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4589 | IF (l_error) THEN |
|---|
| 4590 | WRITE(numout,*) 'Memory allocation error for leaf_frac. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 4591 | & kjpindex,nvm,nleafages |
|---|
| 4592 | STOP 'stomate_init' |
|---|
| 4593 | ENDIF |
|---|
| 4594 | |
|---|
| 4595 | ALLOCATE(RIP_time(kjpindex,nvm),stat=ier) |
|---|
| 4596 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4597 | IF (l_error) THEN |
|---|
| 4598 | WRITE(numout,*) 'Memory allocation error for RIP_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4599 | STOP 'stomate_init' |
|---|
| 4600 | ENDIF |
|---|
| 4601 | |
|---|
| 4602 | ALLOCATE(time_hum_min(kjpindex,nvm),stat=ier) |
|---|
| 4603 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4604 | IF (l_error) THEN |
|---|
| 4605 | WRITE(numout,*) 'Memory allocation error for time_hum_min. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4606 | STOP 'stomate_init' |
|---|
| 4607 | ENDIF |
|---|
| 4608 | |
|---|
| 4609 | ALLOCATE(hum_min_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4610 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4611 | IF (l_error) THEN |
|---|
| 4612 | WRITE(numout,*) 'Memory allocation error for hum_min_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4613 | STOP 'stomate_init' |
|---|
| 4614 | ENDIF |
|---|
| 4615 | |
|---|
| 4616 | |
|---|
| 4617 | ALLOCATE(litter(kjpindex,nlitt,nvm,nlevs,nelements),stat=ier) |
|---|
| 4618 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4619 | IF (l_error) THEN |
|---|
| 4620 | WRITE(numout,*) 'Memory allocation error for litter. We stop. We need kjpindex*nlitt*nvm*nlevs*nelements words', & |
|---|
| 4621 | & kjpindex,nlitt,nvm,nlevs,nelements |
|---|
| 4622 | STOP 'stomate_init' |
|---|
| 4623 | ENDIF |
|---|
| 4624 | |
|---|
| 4625 | ALLOCATE(dead_leaves(kjpindex,nvm,nlitt),stat=ier) |
|---|
| 4626 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4627 | IF (l_error) THEN |
|---|
| 4628 | WRITE(numout,*) 'Memory allocation error for dead_leaves. We stop. We need kjpindex*nvm*nlitt words', & |
|---|
| 4629 | & kjpindex,nvm,nlitt |
|---|
| 4630 | STOP 'stomate_init' |
|---|
| 4631 | ENDIF |
|---|
| 4632 | |
|---|
| 4633 | ALLOCATE(som(kjpindex,ncarb,nvm,nelements),stat=ier) |
|---|
| 4634 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4635 | IF (l_error) THEN |
|---|
| 4636 | WRITE(numout,*) 'Memory allocation error for som. We stop. We need kjpindex*ncarb*nvm*nelements words',& |
|---|
| 4637 | kjpindex,ncarb,nvm,nelements |
|---|
| 4638 | STOP 'stomate_init' |
|---|
| 4639 | ENDIF |
|---|
| 4640 | |
|---|
| 4641 | ALLOCATE(burried_litter(kjpindex,nlitt,nlevs,nelements),stat=ier) |
|---|
| 4642 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4643 | IF (l_error) THEN |
|---|
| 4644 | WRITE(numout,*) 'Memory allocation error for burried_litter. We stop. We need kjpindex*nlitt*nlevs*nelements words',& |
|---|
| 4645 | kjpindex,nlitt,nlevs,nelements |
|---|
| 4646 | STOP 'stomate_init' |
|---|
| 4647 | ENDIF |
|---|
| 4648 | |
|---|
| 4649 | ALLOCATE(burried_fresh_ltr(kjpindex,nparts,nelements),stat=ier) |
|---|
| 4650 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4651 | IF (l_error) THEN |
|---|
| 4652 | WRITE(numout,*) 'Memory allocation error for burried_fresh_ltr. We stop. We need kjpindex*nparts*nelements words',& |
|---|
| 4653 | kjpindex,nparts,nelements |
|---|
| 4654 | STOP 'stomate_init' |
|---|
| 4655 | ENDIF |
|---|
| 4656 | |
|---|
| 4657 | ALLOCATE(burried_fresh_som(kjpindex,nparts,nelements),stat=ier) |
|---|
| 4658 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4659 | IF (l_error) THEN |
|---|
| 4660 | WRITE(numout,*) 'Memory allocation error for burried_fresh_som. We stop. We need kjpindex*nparts*nelements words',& |
|---|
| 4661 | kjpindex,nparts,nelements |
|---|
| 4662 | STOP 'stomate_init' |
|---|
| 4663 | ENDIF |
|---|
| 4664 | |
|---|
| 4665 | ALLOCATE(burried_bact(kjpindex),stat=ier) |
|---|
| 4666 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4667 | IF (l_error) THEN |
|---|
| 4668 | WRITE(numout,*) 'Memory allocation error for burried_bact. We stop. We need kjpindex words',& |
|---|
| 4669 | kjpindex |
|---|
| 4670 | STOP 'stomate_init' |
|---|
| 4671 | ENDIF |
|---|
| 4672 | |
|---|
| 4673 | ALLOCATE(burried_fungivores(kjpindex),stat=ier) |
|---|
| 4674 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4675 | IF (l_error) THEN |
|---|
| 4676 | WRITE(numout,*) 'Memory allocation error for burried_fungivores. We stop. We need kjpindex words',& |
|---|
| 4677 | kjpindex |
|---|
| 4678 | STOP 'stomate_init' |
|---|
| 4679 | ENDIF |
|---|
| 4680 | |
|---|
| 4681 | ALLOCATE(burried_min_nitro(kjpindex,nnspec),stat=ier) |
|---|
| 4682 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4683 | IF (l_error) THEN |
|---|
| 4684 | WRITE(numout,*) 'Memory allocation error for burried_min_nitro. We stop. We need kjpindex*nnspec words',& |
|---|
| 4685 | kjpindex,nnspec |
|---|
| 4686 | STOP 'stomate_init' |
|---|
| 4687 | ENDIF |
|---|
| 4688 | |
|---|
| 4689 | ALLOCATE(burried_deepSOM_a(kjpindex,ngrnd,nelements),stat=ier) |
|---|
| 4690 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4691 | IF (l_error) THEN |
|---|
| 4692 | WRITE(numout,*) 'Memory allocation error for burried_deepSOM_a. We stop. We need kjpindex*ngrnd*ncarb*nelements words',& |
|---|
| 4693 | kjpindex,ngrnd,ncarb,nelements |
|---|
| 4694 | STOP 'stomate_init' |
|---|
| 4695 | ENDIF |
|---|
| 4696 | |
|---|
| 4697 | ALLOCATE(burried_deepSOM_s(kjpindex,ngrnd,nelements),stat=ier) |
|---|
| 4698 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4699 | IF (l_error) THEN |
|---|
| 4700 | WRITE(numout,*) 'Memory allocation error for burried_deepSOM_s. We stop. We need kjpindex*ngrnd*ncarb*nelements words',& |
|---|
| 4701 | kjpindex,ngrnd,ncarb,nelements |
|---|
| 4702 | STOP 'stomate_init' |
|---|
| 4703 | ENDIF |
|---|
| 4704 | |
|---|
| 4705 | ALLOCATE(burried_deepSOM_p(kjpindex,ngrnd,nelements),stat=ier) |
|---|
| 4706 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4707 | IF (l_error) THEN |
|---|
| 4708 | WRITE(numout,*) 'Memory allocation error for burried_deepSOM_p. We stop. We need kjpindex*ngrnd*ncarb*nelements words',& |
|---|
| 4709 | kjpindex,ngrnd,ncarb,nelements |
|---|
| 4710 | STOP 'stomate_init' |
|---|
| 4711 | ENDIF |
|---|
| 4712 | |
|---|
| 4713 | ALLOCATE(burried_som(kjpindex,ncarb,nelements),stat=ier) |
|---|
| 4714 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4715 | IF (l_error) THEN |
|---|
| 4716 | WRITE(numout,*) 'Memory allocation error for burried_som. We stop. We need kjpindex*ncarb*nelements words',& |
|---|
| 4717 | kjpindex,ncarb,nelements |
|---|
| 4718 | STOP 'stomate_init' |
|---|
| 4719 | ENDIF |
|---|
| 4720 | |
|---|
| 4721 | ALLOCATE(som_surf(kjpindex,ncarb,nvm,nelements),stat=ier) |
|---|
| 4722 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for som_surf','','') |
|---|
| 4723 | |
|---|
| 4724 | ALLOCATE(lignin_struc(kjpindex,nvm,nlevs),stat=ier) |
|---|
| 4725 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4726 | IF (l_error) THEN |
|---|
| 4727 | WRITE(numout,*) 'Memory allocation error for lignin_struc. We stop. We need kjpindex*nvm*nlevs words',& |
|---|
| 4728 | kjpindex,nvm,nlevs |
|---|
| 4729 | STOP 'stomate_init' |
|---|
| 4730 | ENDIF |
|---|
| 4731 | |
|---|
| 4732 | ALLOCATE(lignin_wood(kjpindex,nvm,nlevs),stat=ier) |
|---|
| 4733 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4734 | IF (l_error) THEN |
|---|
| 4735 | WRITE(numout,*) 'Memory allocation error for lignin_wood. We stop. We need kjpindex*nvm*nlevs words',& |
|---|
| 4736 | kjpindex,nvm,nlevs |
|---|
| 4737 | STOP 'stomate_init' |
|---|
| 4738 | ENDIF |
|---|
| 4739 | |
|---|
| 4740 | |
|---|
| 4741 | ALLOCATE(turnover_time(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4742 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4743 | IF (l_error) THEN |
|---|
| 4744 | WRITE(numout,*) 'Memory allocation error for turnover_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4745 | STOP 'stomate_init' |
|---|
| 4746 | ENDIF |
|---|
| 4747 | |
|---|
| 4748 | ALLOCATE(bm_to_litter(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4749 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4750 | IF (l_error) THEN |
|---|
| 4751 | WRITE(numout,*) 'Memory allocation error for bm_to_litter. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4752 | & kjpindex,nvm,nparts,nelements |
|---|
| 4753 | STOP 'stomate_init' |
|---|
| 4754 | ENDIF |
|---|
| 4755 | |
|---|
| 4756 | ALLOCATE(bm_to_litter_resid(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4757 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4758 | IF (l_error) THEN |
|---|
| 4759 | WRITE(numout,*) 'Memory allocation error for bm_to_litter_resid. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4760 | & kjpindex,nvm,nparts,nelements |
|---|
| 4761 | STOP 'stomate_init' |
|---|
| 4762 | ENDIF |
|---|
| 4763 | |
|---|
| 4764 | ALLOCATE(tree_bm_to_litter(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4765 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4766 | IF (l_error) THEN |
|---|
| 4767 | WRITE(numout,*) 'Memory allocation error for tree_bm_to_litter. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4768 | & kjpindex,nvm,nparts,nelements |
|---|
| 4769 | STOP 'stomate_init' |
|---|
| 4770 | ENDIF |
|---|
| 4771 | |
|---|
| 4772 | ALLOCATE(tree_bm_to_litter_resid(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4773 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4774 | IF (l_error) THEN |
|---|
| 4775 | WRITE(numout,*) 'Memory allocation error for tree_bm_to_litter_resid. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4776 | & kjpindex,nvm,nparts,nelements |
|---|
| 4777 | STOP 'stomate_init' |
|---|
| 4778 | ENDIF |
|---|
| 4779 | |
|---|
| 4780 | ALLOCATE(bm_to_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4781 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4782 | IF (l_error) THEN |
|---|
| 4783 | WRITE(numout,*) 'Memory allocation error for bm_to_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4784 | & kjpindex,nvm,nparts,nelements |
|---|
| 4785 | STOP 'stomate_init' |
|---|
| 4786 | ENDIF |
|---|
| 4787 | |
|---|
| 4788 | ALLOCATE(tree_bm_to_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4789 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4790 | IF (l_error) THEN |
|---|
| 4791 | WRITE(numout,*) 'Memory allocation error for tree_bm_to_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4792 | & kjpindex,nvm,nparts,nelements |
|---|
| 4793 | STOP 'stomate_init' |
|---|
| 4794 | ENDIF |
|---|
| 4795 | |
|---|
| 4796 | ALLOCATE(herbivores(kjpindex,nvm),stat=ier) |
|---|
| 4797 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4798 | IF (l_error) THEN |
|---|
| 4799 | WRITE(numout,*) 'Memory allocation error for herbivores. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4800 | STOP 'stomate_init' |
|---|
| 4801 | ENDIF |
|---|
| 4802 | |
|---|
| 4803 | ALLOCATE(resp_maint_part_radia(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4804 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4805 | IF (l_error) THEN |
|---|
| 4806 | WRITE(numout,*) 'Memory allocation error for resp_maint_part_radia. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 4807 | & kjpindex,nvm,nparts |
|---|
| 4808 | STOP 'stomate_init' |
|---|
| 4809 | ENDIF |
|---|
| 4810 | |
|---|
| 4811 | ALLOCATE(resp_maint_part(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4812 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4813 | IF (l_error) THEN |
|---|
| 4814 | WRITE(numout,*) 'Memory allocation error for resp_maint_part. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 4815 | & kjpindex,nvm,nparts |
|---|
| 4816 | STOP 'stomate_init' |
|---|
| 4817 | ENDIF |
|---|
| 4818 | resp_maint_part(:,:,:) = zero |
|---|
| 4819 | |
|---|
| 4820 | ALLOCATE(hori_index(kjpindex),stat=ier) |
|---|
| 4821 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4822 | IF (l_error) THEN |
|---|
| 4823 | WRITE(numout,*) 'Memory allocation error for hori_index. We stop. We need kjpindex words',kjpindex |
|---|
| 4824 | STOP 'stomate_init' |
|---|
| 4825 | ENDIF |
|---|
| 4826 | |
|---|
| 4827 | ALLOCATE(horipft_index(kjpindex*nvm),stat=ier) |
|---|
| 4828 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4829 | IF (l_error) THEN |
|---|
| 4830 | WRITE(numout,*) 'Memory allocation error for horipft_index. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4831 | STOP 'stomate_init' |
|---|
| 4832 | ENDIF |
|---|
| 4833 | |
|---|
| 4834 | ALLOCATE(horican_index(kjpindex*nlevels_tot),stat=ier) |
|---|
| 4835 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4836 | IF (l_error) THEN |
|---|
| 4837 | WRITE(numout,*) 'Memory allocation error for horican_index. We stop. We need kjpindex*nlevels_tot words',& |
|---|
| 4838 | kjpindex*nlevels_tot |
|---|
| 4839 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4840 | ENDIF |
|---|
| 4841 | |
|---|
| 4842 | ALLOCATE(horicut_index(kjpindex*ncut_times),stat=ier) |
|---|
| 4843 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4844 | IF (l_error) THEN |
|---|
| 4845 | WRITE(numout,*) 'Memory allocation error for horicut_index. We stop. We need kjpindex*ncut_times words',& |
|---|
| 4846 | kjpindex*ncut_times |
|---|
| 4847 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4848 | ENDIF |
|---|
| 4849 | |
|---|
| 4850 | ALLOCATE (horip_s_index(kjpindex*nshort), stat=ier) |
|---|
| 4851 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4852 | IF (l_error) THEN |
|---|
| 4853 | WRITE(numout,*) 'Memory allocation error for horip_s_index. We stop. We need kjpindex*10 words',kjpindex,nshort |
|---|
| 4854 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4855 | ENDIF |
|---|
| 4856 | |
|---|
| 4857 | ALLOCATE (horip_m_index(kjpindex*nmedium), stat=ier) |
|---|
| 4858 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4859 | IF (l_error) THEN |
|---|
| 4860 | WRITE(numout,*) 'Memory allocation error for horip_m_index. We stop. We need kjpindex*10 words',kjpindex,nmedium |
|---|
| 4861 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4862 | ENDIF |
|---|
| 4863 | |
|---|
| 4864 | ALLOCATE (horip_l_index(kjpindex*100), stat=ier) |
|---|
| 4865 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4866 | IF (l_error) THEN |
|---|
| 4867 | WRITE(numout,*) 'Memory allocation error for horip_l_index. We stop. We need kjpindex*100 words',kjpindex,nlong |
|---|
| 4868 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4869 | ENDIF |
|---|
| 4870 | |
|---|
| 4871 | ALLOCATE (horip_ss_index(kjpindex*(nshort+1)), stat=ier) |
|---|
| 4872 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4873 | IF (l_error) THEN |
|---|
| 4874 | WRITE(numout,*) 'Memory allocation error for horip_ss_index. We stop. We need kjpindex*11 words',kjpindex,nshort+1 |
|---|
| 4875 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4876 | ENDIF |
|---|
| 4877 | |
|---|
| 4878 | ALLOCATE (horip_mm_index(kjpindex*(nmedium+1)), stat=ier) |
|---|
| 4879 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4880 | IF (l_error) THEN |
|---|
| 4881 | WRITE(numout,*) 'Memory allocation error for horip_mm_index. We stop. We need kjpindex*11 words',kjpindex,nmedium+1 |
|---|
| 4882 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4883 | ENDIF |
|---|
| 4884 | |
|---|
| 4885 | ALLOCATE (horip_ll_index(kjpindex*(nlong+1)), stat=ier) |
|---|
| 4886 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4887 | IF (l_error) THEN |
|---|
| 4888 | WRITE(numout,*) 'Memory allocation error for horip_ll_index. We stop. We need kjpindex*101 words',kjpindex,nlong+1 |
|---|
| 4889 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4890 | ENDIF |
|---|
| 4891 | |
|---|
| 4892 | ALLOCATE (prod_s(kjpindex,0:nshort,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4893 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4894 | IF (l_error) THEN |
|---|
| 4895 | WRITE(numout,*) 'Memory allocation error for prod_s. We stop. We need kjpindex*(nshort+1)*nelements*nlanduse words', & |
|---|
| 4896 | kjpindex,nshort+1,nelements,nlanduse,nlctypes |
|---|
| 4897 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4898 | ENDIF |
|---|
| 4899 | prod_s(:,:,:,:,:) = zero |
|---|
| 4900 | |
|---|
| 4901 | |
|---|
| 4902 | ALLOCATE (prod_m(kjpindex,0:nmedium,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4903 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4904 | IF (l_error) THEN |
|---|
| 4905 | WRITE(numout,*) 'Memory allocation error for prod_m. We stop. We need kjpindex*(nmedium+1)*nelements*nlanduse words', & |
|---|
| 4906 | kjpindex,nmedium+1,nelements,nlanduse,nlctypes |
|---|
| 4907 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4908 | ENDIF |
|---|
| 4909 | prod_m(:,:,:,:,:) = zero |
|---|
| 4910 | |
|---|
| 4911 | ALLOCATE (prod_l(kjpindex,0:nlong,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4912 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4913 | IF (l_error) THEN |
|---|
| 4914 | WRITE(numout,*) 'Memory allocation error for prod_l. We stop. We need kjpindex*(nlong+1)*nelements*nlanduse* words', & |
|---|
| 4915 | kjpindex,nlong+1,nelements,nlanduse,nlctypes |
|---|
| 4916 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4917 | ENDIF |
|---|
| 4918 | prod_l(:,:,:,:,:) = zero |
|---|
| 4919 | |
|---|
| 4920 | ALLOCATE (flux_s(kjpindex,nshort,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4921 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4922 | IF (l_error) THEN |
|---|
| 4923 | WRITE(numout,*) 'Memory allocation error for flux_s. We stop. We need kjpindex*nshort*nelements*nlanduse words', & |
|---|
| 4924 | kjpindex,nshort,nelements,nlanduse,nlctypes |
|---|
| 4925 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4926 | ENDIF |
|---|
| 4927 | flux_s(:,:,:,:,:) = zero |
|---|
| 4928 | |
|---|
| 4929 | ALLOCATE (flux_m(kjpindex,nmedium,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4930 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4931 | IF (l_error) THEN |
|---|
| 4932 | WRITE(numout,*) 'Memory allocation error for flux_m. We stop. We need kjpindex*nmedium*nlanduse words', & |
|---|
| 4933 | kjpindex,nmedium,nelements,nlanduse,nlctypes |
|---|
| 4934 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4935 | ENDIF |
|---|
| 4936 | flux_m(:,:,:,:,:) = zero |
|---|
| 4937 | |
|---|
| 4938 | ALLOCATE (flux_l(kjpindex,nlong,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4939 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4940 | IF (l_error) THEN |
|---|
| 4941 | WRITE(numout,*) 'Memory allocation error for flux_l. We stop. We need kjpindex*nlong*nelements*nlanduse words', & |
|---|
| 4942 | kjpindex,nlong,nelements,nlanduse,nlctypes |
|---|
| 4943 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4944 | ENDIF |
|---|
| 4945 | flux_l(:,:,:,:,:) = zero |
|---|
| 4946 | |
|---|
| 4947 | ALLOCATE (flux_prod_s(kjpindex,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4948 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4949 | IF (l_error) THEN |
|---|
| 4950 | WRITE(numout,*) 'Memory allocation error for flux_prod_s. We stop. We need kjpindex*nelements*nlanduse words', & |
|---|
| 4951 | kjpindex,nelements,nlanduse,nlctypes |
|---|
| 4952 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4953 | ENDIF |
|---|
| 4954 | flux_prod_s(:,:,:,:) = zero |
|---|
| 4955 | |
|---|
| 4956 | ALLOCATE (flux_prod_m(kjpindex,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4957 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4958 | IF (l_error) THEN |
|---|
| 4959 | WRITE(numout,*) 'Memory allocation error for flux_prod_m. We stop. We need kjpindex*nelements*nlanduse words', & |
|---|
| 4960 | kjpindex,nelements,nlanduse,nlctypes |
|---|
| 4961 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4962 | ENDIF |
|---|
| 4963 | flux_prod_m(:,:,:,:) = zero |
|---|
| 4964 | |
|---|
| 4965 | ALLOCATE (flux_prod_l(kjpindex,nelements,nlanduse,nlctypes), stat=ier) |
|---|
| 4966 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4967 | IF (l_error) THEN |
|---|
| 4968 | WRITE(numout,*) 'Memory allocation error for flux_prod_l. We stop. We need kjpindex*nelements*nlanduse words', & |
|---|
| 4969 | kjpindex,nelements,nlanduse,nlctypes |
|---|
| 4970 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4971 | ENDIF |
|---|
| 4972 | flux_prod_l(:,:,:,:) = zero |
|---|
| 4973 | |
|---|
| 4974 | ALLOCATE (co2_flux(kjpindex,nvm), stat=ier) |
|---|
| 4975 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4976 | IF (l_error) THEN |
|---|
| 4977 | WRITE(numout,*) 'Memory allocation error for co2_flux. We stop. We need kjpindex words',kjpindex,nvm |
|---|
| 4978 | STOP 'stomate_init' |
|---|
| 4979 | ENDIF |
|---|
| 4980 | |
|---|
| 4981 | ALLOCATE (fco2_lu(kjpindex), stat=ier) |
|---|
| 4982 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4983 | IF (l_error) THEN |
|---|
| 4984 | WRITE(numout,*) 'Memory allocation error for fco2_lu. We stop. We need kjpindex words',kjpindex |
|---|
| 4985 | STOP 'stomate_init' |
|---|
| 4986 | ENDIF |
|---|
| 4987 | |
|---|
| 4988 | ALLOCATE (fco2_wh(kjpindex), stat=ier) |
|---|
| 4989 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4990 | IF (l_error) THEN |
|---|
| 4991 | WRITE(numout,*) 'Memory allocation error for fco2_wh. We stop. We need kjpindex words',kjpindex |
|---|
| 4992 | STOP 'stomate_init' |
|---|
| 4993 | ENDIF |
|---|
| 4994 | |
|---|
| 4995 | ALLOCATE (fco2_ha(kjpindex), stat=ier) |
|---|
| 4996 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4997 | IF (l_error) THEN |
|---|
| 4998 | WRITE(numout,*) 'Memory allocation error for fco2_ha. We stop. We need kjpindex words',kjpindex |
|---|
| 4999 | STOP 'stomate_init' |
|---|
| 5000 | ENDIF |
|---|
| 5001 | |
|---|
| 5002 | ALLOCATE (woodharvestpft(kjpindex,nvm), stat=ier) |
|---|
| 5003 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5004 | IF (l_error) THEN |
|---|
| 5005 | WRITE(numout,*) 'Memory allocation error for woodharvestpft. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 5006 | STOP 'stomate_init' |
|---|
| 5007 | ENDIF |
|---|
| 5008 | |
|---|
| 5009 | ALLOCATE (fDeforestToProduct(kjpindex,nvm), stat=ier) |
|---|
| 5010 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5011 | IF (l_error) THEN |
|---|
| 5012 | WRITE(numout,*) 'Memory allocation error for fDeforestToProduct. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 5013 | STOP 'stomate_init' |
|---|
| 5014 | ENDIF |
|---|
| 5015 | |
|---|
| 5016 | ALLOCATE (fLulccResidue(kjpindex,nvm), stat=ier) |
|---|
| 5017 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5018 | IF (l_error) THEN |
|---|
| 5019 | WRITE(numout,*) 'Memory allocation error for fLulccResidue. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 5020 | STOP 'stomate_init' |
|---|
| 5021 | ENDIF |
|---|
| 5022 | |
|---|
| 5023 | ALLOCATE (fHarvestToProduct(kjpindex,nvm), stat=ier) |
|---|
| 5024 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5025 | IF (l_error) THEN |
|---|
| 5026 | WRITE(numout,*) 'Memory allocation error for fHarvestToProduct. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 5027 | STOP 'stomate_init' |
|---|
| 5028 | ENDIF |
|---|
| 5029 | |
|---|
| 5030 | ALLOCATE (carb_mass_total(kjpindex), stat=ier) |
|---|
| 5031 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5032 | IF (l_error) THEN |
|---|
| 5033 | WRITE(numout,*) 'Memory allocation error for carb_mass_total. We stop. We need kjpindex words',kjpindex |
|---|
| 5034 | STOP 'stomate_init' |
|---|
| 5035 | ENDIF |
|---|
| 5036 | |
|---|
| 5037 | ALLOCATE (som_input_daily(kjpindex,ncarb,nvm,nelements), stat=ier) |
|---|
| 5038 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5039 | IF (l_error) THEN |
|---|
| 5040 | WRITE(numout,*) 'Memory allocation error for som_input_daily. We stop. We need kjpindex*ncarb*nvm*nelements words', & |
|---|
| 5041 | & kjpindex,ncarb,nvm,nelements |
|---|
| 5042 | STOP 'stomate_init' |
|---|
| 5043 | ENDIF |
|---|
| 5044 | |
|---|
| 5045 | ALLOCATE (fpc_max(kjpindex,nvm), stat=ier) |
|---|
| 5046 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5047 | IF (l_error) THEN |
|---|
| 5048 | WRITE(numout,*) 'Memory allocation error for fpc_max. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 5049 | STOP 'stomate_init' |
|---|
| 5050 | ENDIF |
|---|
| 5051 | |
|---|
| 5052 | ALLOCATE(cn_leaf_min_season(kjpindex,nvm),stat=ier) |
|---|
| 5053 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5054 | IF (l_error) THEN |
|---|
| 5055 | WRITE(numout,*) 'Memory allocation error for cn_leaf_min_season. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 5056 | STOP 'stomate_init' |
|---|
| 5057 | ENDIF |
|---|
| 5058 | |
|---|
| 5059 | ALLOCATE(nstress_season(kjpindex,nvm),stat=ier) |
|---|
| 5060 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5061 | IF (l_error) THEN |
|---|
| 5062 | WRITE(numout,*) 'Memory allocation error for nstress_season. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 5063 | STOP 'stomate_init' |
|---|
| 5064 | ENDIF |
|---|
| 5065 | |
|---|
| 5066 | ALLOCATE(soil_n_min(kjpindex,nvm,nnspec),stat=ier) |
|---|
| 5067 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5068 | IF (l_error) THEN |
|---|
| 5069 | WRITE(numout,*) 'Memory allocation error for soil_n_min. We stop. We need kjpindex*nvm words',kjpindex,nvm,nnspec |
|---|
| 5070 | STOP 'stomate_init' |
|---|
| 5071 | ENDIF |
|---|
| 5072 | |
|---|
| 5073 | ALLOCATE(p_O2(kjpindex,nvm),stat=ier) |
|---|
| 5074 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5075 | IF (l_error) THEN |
|---|
| 5076 | WRITE(numout,*) 'Memory allocation error for p_O2. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 5077 | STOP 'stomate_init' |
|---|
| 5078 | ENDIF |
|---|
| 5079 | |
|---|
| 5080 | ALLOCATE(bact(kjpindex,nvm),stat=ier) |
|---|
| 5081 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5082 | IF (l_error) THEN |
|---|
| 5083 | WRITE(numout,*) 'Memory allocation error for bact. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 5084 | STOP 'stomate_init' |
|---|
| 5085 | ENDIF |
|---|
| 5086 | |
|---|
| 5087 | ALLOCATE(ok_equilibrium(kjpindex),stat=ier) |
|---|
| 5088 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5089 | IF (l_error) THEN |
|---|
| 5090 | WRITE(numout,*) 'Memory allocation error for ok_equilibrium. We stop. We need kjpindex words',kjpindex |
|---|
| 5091 | STOP 'stomate_init' |
|---|
| 5092 | ENDIF |
|---|
| 5093 | |
|---|
| 5094 | ALLOCATE(drainage_daily(kjpindex,nvm),stat=ier) |
|---|
| 5095 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5096 | IF (l_error) THEN |
|---|
| 5097 | WRITE(numout,*) ' Memory allocation error for drainage_daily. We stop. We need kjpindex*nvm words = ',kjpindex, nvm |
|---|
| 5098 | STOP 'drainage_daily' |
|---|
| 5099 | ENDIF |
|---|
| 5100 | |
|---|
| 5101 | ALLOCATE (plant_n_uptake_daily(kjpindex,nvm,nionspec), stat=ier) |
|---|
| 5102 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5103 | IF (l_error) THEN |
|---|
| 5104 | WRITE(numout,*) ' Memory allocation error for plant_n_uptake_daily. We stop. We need kjpindex words = ',kjpindex*nvm*nionspec |
|---|
| 5105 | STOP 'plant_n_uptake_daily' |
|---|
| 5106 | ENDIF |
|---|
| 5107 | |
|---|
| 5108 | ALLOCATE (n_mineralisation_d(kjpindex,nvm), stat=ier) |
|---|
| 5109 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5110 | IF (l_error) THEN |
|---|
| 5111 | WRITE(numout,*) ' Memory allocation error for n_mineralisation_d. We stop. We need kjpindex words = ',kjpindex*nvm |
|---|
| 5112 | STOP 'n_mineralisation_d' |
|---|
| 5113 | ENDIF |
|---|
| 5114 | |
|---|
| 5115 | ALLOCATE (atm_to_bm_daily(kjpindex,nvm,nelements), stat=ier) |
|---|
| 5116 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5117 | IF (l_error) THEN |
|---|
| 5118 | WRITE(numout,*) ' Memory allocation error for atm_to_bm_daily. We stop. We need kjpindex words = ',kjpindex*nvm*nelements |
|---|
| 5119 | STOP 'atm_to_bm_daily' |
|---|
| 5120 | ENDIF |
|---|
| 5121 | |
|---|
| 5122 | ALLOCATE (leaching_daily(kjpindex,nvm,nionspec), stat=ier) |
|---|
| 5123 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5124 | IF (l_error) THEN |
|---|
| 5125 | WRITE(numout,*) ' Memory allocation error for leaching_daily. We stop. We need kjpindex words = ',kjpindex*nvm*nionspec |
|---|
| 5126 | STOP 'leaching_daily' |
|---|
| 5127 | ENDIF |
|---|
| 5128 | |
|---|
| 5129 | ALLOCATE (emission_daily(kjpindex,nvm,nnspec), stat=ier) |
|---|
| 5130 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5131 | IF (l_error) THEN |
|---|
| 5132 | WRITE(numout,*) ' Memory allocation error for emission_daily. We stop. We need kjpindex words = ',kjpindex*nvm*nnspec |
|---|
| 5133 | STOP 'emission_daily' |
|---|
| 5134 | ENDIF |
|---|
| 5135 | |
|---|
| 5136 | ALLOCATE (n_input_daily(kjpindex,nvm,ninput), stat=ier) |
|---|
| 5137 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 5138 | IF (l_error) THEN |
|---|
| 5139 | WRITE(numout,*) ' Memory allocation error for n_input_daily. We stop. We need kjpindex words = ',kjpindex*nvm*ninput |
|---|
| 5140 | STOP 'n_input_daily' |
|---|
| 5141 | ENDIF |
|---|
| 5142 | |
|---|
| 5143 | ALLOCATE(carbon_eq(kjpindex),stat=ier) |
|---|
| 5144 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5145 | IF (l_error) THEN |
|---|
| 5146 | WRITE(numout,*) 'Memory allocation error for carbon_eq. We stop. We need kjpindex words',kjpindex |
|---|
| 5147 | STOP 'stomate_init' |
|---|
| 5148 | ENDIF |
|---|
| 5149 | |
|---|
| 5150 | ALLOCATE(nbp_accu_flux(kjpindex,nelements),stat=ier) |
|---|
| 5151 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5152 | IF (l_error) THEN |
|---|
| 5153 | WRITE(numout,*) 'Memory allocation error for nbp_accu_flux. We stop. We need kjpindex*nelements words',kjpindex*nelements |
|---|
| 5154 | STOP 'stomate_init' |
|---|
| 5155 | ENDIF |
|---|
| 5156 | |
|---|
| 5157 | ALLOCATE(nbp_pool_start(kjpindex,nelements),stat=ier) |
|---|
| 5158 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5159 | IF (l_error) THEN |
|---|
| 5160 | WRITE(numout,*) 'Memory allocation error for nbp_pool_start. We stop. We need kjpindex*nelements words',kjpindex*nelements |
|---|
| 5161 | STOP 'stomate_init' |
|---|
| 5162 | ENDIF |
|---|
| 5163 | |
|---|
| 5164 | ALLOCATE(matrixA(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 5165 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5166 | IF (l_error) THEN |
|---|
| 5167 | WRITE(numout,*) 'Memory allocation error for matrixA. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 5168 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 5169 | STOP 'stomate_init' |
|---|
| 5170 | ENDIF |
|---|
| 5171 | |
|---|
| 5172 | ALLOCATE(vectorB(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5173 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5174 | IF (l_error) THEN |
|---|
| 5175 | WRITE(numout,*) 'Memory allocation error for vectorB. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5176 | & kjpindex, nvm, nbpools |
|---|
| 5177 | STOP 'stomate_init' |
|---|
| 5178 | ENDIF |
|---|
| 5179 | |
|---|
| 5180 | ALLOCATE(vectorU(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5181 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5182 | IF (l_error) THEN |
|---|
| 5183 | WRITE(numout,*) 'Memory allocation error for vectorU. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5184 | & kjpindex, nvm, nbpools |
|---|
| 5185 | STOP 'stomate_init' |
|---|
| 5186 | ENDIF |
|---|
| 5187 | |
|---|
| 5188 | ALLOCATE(matrixV(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 5189 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5190 | IF (l_error) THEN |
|---|
| 5191 | WRITE(numout,*) 'Memory allocation error for matrixV. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 5192 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 5193 | STOP 'stomate_init' |
|---|
| 5194 | ENDIF |
|---|
| 5195 | |
|---|
| 5196 | ALLOCATE(matrixW(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 5197 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5198 | IF (l_error) THEN |
|---|
| 5199 | WRITE(numout,*) 'Memory allocation error for matrixW. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 5200 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 5201 | STOP 'stomate_init' |
|---|
| 5202 | ENDIF |
|---|
| 5203 | |
|---|
| 5204 | ALLOCATE(previous_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5205 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5206 | IF (l_error) THEN |
|---|
| 5207 | WRITE(numout,*) 'Memory allocation error for previous_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5208 | & kjpindex, nvm, nbpools |
|---|
| 5209 | STOP 'stomate_init' |
|---|
| 5210 | ENDIF |
|---|
| 5211 | |
|---|
| 5212 | ALLOCATE(current_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5213 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5214 | IF (l_error) THEN |
|---|
| 5215 | WRITE(numout,*) 'Memory allocation error for current_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5216 | & kjpindex, nvm, nbpools |
|---|
| 5217 | STOP 'stomate_init' |
|---|
| 5218 | ENDIF |
|---|
| 5219 | |
|---|
| 5220 | ALLOCATE(CN_som_litter_longterm(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5221 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5222 | IF (l_error) THEN |
|---|
| 5223 | WRITE(numout,*) 'Memory allocation error for CN_som_litter_longterm. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5224 | & kjpindex, nvm, nbpools |
|---|
| 5225 | STOP 'stomate_init' |
|---|
| 5226 | ENDIF |
|---|
| 5227 | |
|---|
| 5228 | ALLOCATE(KF(kjpindex,nvm),stat=ier) |
|---|
| 5229 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5230 | IF (l_error) THEN |
|---|
| 5231 | WRITE(numout,*) ' Memory allocation error for KF. We stop. We need nvm words = ',kjpindex*nvm |
|---|
| 5232 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5233 | ENDIF |
|---|
| 5234 | KF(:,:) = zero ! Is there a better place in the code for this? |
|---|
| 5235 | |
|---|
| 5236 | ALLOCATE(k_latosa_adapt(kjpindex,nvm),stat=ier) |
|---|
| 5237 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5238 | IF (l_error) THEN |
|---|
| 5239 | WRITE(numout,*) ' Memory allocation error for k_latosa_adapt. We stop. We need nvm words = ',kjpindex*nvm |
|---|
| 5240 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5241 | ENDIF |
|---|
| 5242 | |
|---|
| 5243 | ALLOCATE(harvest_pool_acc(kjpindex,nvm,ndia_harvest+1,nelements),stat=ier) |
|---|
| 5244 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5245 | IF (l_error) THEN |
|---|
| 5246 | WRITE(numout,*) ' Memory allocation error for harvest_pool_acc. We stop. We need many words = ',& |
|---|
| 5247 | kjpindex*nvm*(ndia_harvest+1)*nelements |
|---|
| 5248 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5249 | ENDIF |
|---|
| 5250 | harvest_pool_acc(:,:,:,:) = zero |
|---|
| 5251 | |
|---|
| 5252 | ALLOCATE(harvest_type(kjpindex,nvm),stat=ier) |
|---|
| 5253 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5254 | IF (l_error) THEN |
|---|
| 5255 | WRITE(numout,*) ' Memory allocation error for harvest_type. We stop. We need many words = ',& |
|---|
| 5256 | kjpindex*nvm |
|---|
| 5257 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5258 | ENDIF |
|---|
| 5259 | harvest_type(:,:) = zero |
|---|
| 5260 | |
|---|
| 5261 | ALLOCATE(harvest_cut(kjpindex,nvm),stat=ier) |
|---|
| 5262 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5263 | IF (l_error) THEN |
|---|
| 5264 | WRITE(numout,*) ' Memory allocation error for harvest_cut. We stop. We need many words = ',& |
|---|
| 5265 | kjpindex*nvm |
|---|
| 5266 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5267 | ENDIF |
|---|
| 5268 | harvest_cut(:,:) = zero |
|---|
| 5269 | |
|---|
| 5270 | ALLOCATE(harvest_area_acc(kjpindex,nvm),stat=ier) |
|---|
| 5271 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5272 | IF (l_error) THEN |
|---|
| 5273 | WRITE(numout,*) ' Memory allocation error for harvest_area_acc. We stop. We need many words = ',& |
|---|
| 5274 | kjpindex*nvm |
|---|
| 5275 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5276 | ENDIF |
|---|
| 5277 | harvest_area_acc(:,:) = zero |
|---|
| 5278 | |
|---|
| 5279 | ALLOCATE(gap_area_save(kjpindex,nvm,wind_years),stat=ier) |
|---|
| 5280 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5281 | IF (l_error) THEN |
|---|
| 5282 | WRITE(numout,*) ' Memory allocation error for gap_area_save. We stop. We need many words = ',& |
|---|
| 5283 | kjpindex*nvm*wind_years |
|---|
| 5284 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5285 | ENDIF |
|---|
| 5286 | |
|---|
| 5287 | ALLOCATE(total_ba_init(kjpindex,nvm),stat=ier) |
|---|
| 5288 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5289 | IF (l_error) THEN |
|---|
| 5290 | WRITE(numout,*) ' Memory allocation error for total_ba_init. We stop. We need many words = ',& |
|---|
| 5291 | kjpindex*nvm |
|---|
| 5292 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5293 | ENDIF |
|---|
| 5294 | |
|---|
| 5295 | ALLOCATE(harvest_pool_bound(0:ndia_harvest+1),stat=ier) |
|---|
| 5296 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5297 | IF (l_error) THEN |
|---|
| 5298 | WRITE(numout,*) ' Memory allocation error for harvest_pool_bound. ' // & |
|---|
| 5299 | 'We stop. We need ndia_harvest+2 words = ',& |
|---|
| 5300 | ndia_harvest+2 |
|---|
| 5301 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5302 | ENDIF |
|---|
| 5303 | |
|---|
| 5304 | ! Here we can initialize the values of this array, too. They |
|---|
| 5305 | ! should never change over the course of the simulation. |
|---|
| 5306 | harvest_pool_bound(ndia_harvest+1) = val_exp |
|---|
| 5307 | DO idia = 0,ndia_harvest |
|---|
| 5308 | harvest_pool_bound(idia) = max_harvest_dia * & |
|---|
| 5309 | REAL(idia,r_std) / REAL(ndia_harvest,r_std) |
|---|
| 5310 | ENDDO |
|---|
| 5311 | |
|---|
| 5312 | ALLOCATE(risk_index(kjpindex,nvm),stat=ier) |
|---|
| 5313 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5314 | IF (l_error) THEN |
|---|
| 5315 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5316 | ENDIF |
|---|
| 5317 | risk_index(:,:)=zero |
|---|
| 5318 | |
|---|
| 5319 | ALLOCATE(sumTeff(kjpindex,nvm),stat=ier) |
|---|
| 5320 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5321 | IF (l_error) THEN |
|---|
| 5322 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5323 | ENDIF |
|---|
| 5324 | sumTeff(:,:)=zero |
|---|
| 5325 | |
|---|
| 5326 | |
|---|
| 5327 | ALLOCATE(beetle_diapause(kjpindex,nvm),stat=ier) |
|---|
| 5328 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5329 | IF (l_error) THEN |
|---|
| 5330 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5331 | ENDIF |
|---|
| 5332 | beetle_diapause(:,:)=zero |
|---|
| 5333 | |
|---|
| 5334 | ALLOCATE(mai(kjpindex,nvm),stat=ier) |
|---|
| 5335 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5336 | IF (l_error) THEN |
|---|
| 5337 | WRITE(numout,*) ' Memory allocation error for mai. ' // & |
|---|
| 5338 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5339 | kjpindex*nvm |
|---|
| 5340 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5341 | ENDIF |
|---|
| 5342 | |
|---|
| 5343 | ALLOCATE(pai(kjpindex,nvm),stat=ier) |
|---|
| 5344 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5345 | IF (l_error) THEN |
|---|
| 5346 | WRITE(numout,*) ' Memory allocation error for pai. ' // & |
|---|
| 5347 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5348 | kjpindex*nvm |
|---|
| 5349 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5350 | ENDIF |
|---|
| 5351 | |
|---|
| 5352 | ALLOCATE(previous_wood_volume(kjpindex,nvm),stat=ier) |
|---|
| 5353 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5354 | IF (l_error) THEN |
|---|
| 5355 | WRITE(numout,*) ' Memory allocation error for previous_wood_volume. ' // & |
|---|
| 5356 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5357 | kjpindex*nvm |
|---|
| 5358 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5359 | ENDIF |
|---|
| 5360 | |
|---|
| 5361 | ALLOCATE(mai_count(kjpindex,nvm),stat=ier) |
|---|
| 5362 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5363 | IF (l_error) THEN |
|---|
| 5364 | WRITE(numout,*) 'Memory allocation error for mai_count. We stop. We need kjpindex*nvm words', & |
|---|
| 5365 | & kjpindex, nvm |
|---|
| 5366 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5367 | ENDIF |
|---|
| 5368 | |
|---|
| 5369 | ALLOCATE(coppice_dens(kjpindex,nvm),stat=ier) |
|---|
| 5370 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5371 | IF (l_error) THEN |
|---|
| 5372 | WRITE(numout,*) ' Memory allocation error for coppice_dens. ' // & |
|---|
| 5373 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5374 | kjpindex*nvm |
|---|
| 5375 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5376 | ENDIF |
|---|
| 5377 | |
|---|
| 5378 | ALLOCATE (rue_longterm(kjpindex,nvm), stat=ier) |
|---|
| 5379 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5380 | IF (l_error) THEN |
|---|
| 5381 | WRITE(numout,*) 'Memory allocation error for rue_longterm. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5382 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5383 | ENDIF |
|---|
| 5384 | rue_longterm(:,:) = un |
|---|
| 5385 | |
|---|
| 5386 | ALLOCATE (leaf_age_crit(kjpindex,nvm), stat=ier) |
|---|
| 5387 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5388 | IF (l_error) THEN |
|---|
| 5389 | WRITE(numout,*) 'Memory allocation error for leaf_age_crit. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5390 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5391 | ENDIF |
|---|
| 5392 | |
|---|
| 5393 | ALLOCATE (leaf_classes(kjpindex,nvm), stat=ier) |
|---|
| 5394 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5395 | IF (l_error) THEN |
|---|
| 5396 | WRITE(numout,*) 'Memory allocation error for leaf_classes. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5397 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5398 | ENDIF |
|---|
| 5399 | |
|---|
| 5400 | ALLOCATE (lab_fac(kjpindex,nvm), stat=ier) |
|---|
| 5401 | ! temp fix, initializing it here...the values get set in stomate_growth_fun_all, |
|---|
| 5402 | ! but they get used in stomate_resp beforehand, so maybe a code flow problem? |
|---|
| 5403 | lab_fac(:,:)=zero |
|---|
| 5404 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5405 | IF (l_error) THEN |
|---|
| 5406 | WRITE(numout,*) 'Memory allocation error for lab_fac. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5407 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5408 | ENDIF |
|---|
| 5409 | |
|---|
| 5410 | ALLOCATE(forest_managed(kjpindex,nvm),stat=ier) |
|---|
| 5411 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5412 | IF (l_error) THEN |
|---|
| 5413 | WRITE(numout,*) 'Memory allocation error for forest_managed. We stop. We need kjpindex*nvm words', & |
|---|
| 5414 | & kjpindex, nvm |
|---|
| 5415 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5416 | ENDIF |
|---|
| 5417 | |
|---|
| 5418 | ALLOCATE(spinup_clearcut(kjpindex,nvm),stat=ier) |
|---|
| 5419 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5420 | IF (l_error) THEN |
|---|
| 5421 | WRITE(numout,*) 'Memory allocation error for spinup_clearcut. We stop. We need kjpindex*nvm words', & |
|---|
| 5422 | & kjpindex, nvm |
|---|
| 5423 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5424 | ENDIF |
|---|
| 5425 | |
|---|
| 5426 | ALLOCATE(species_change_map(kjpindex,nvm),stat=ier) |
|---|
| 5427 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5428 | IF (l_error) THEN |
|---|
| 5429 | WRITE(numout,*) 'Memory allocation error for species_change_map. We stop. We need kjpindex*nvm words', & |
|---|
| 5430 | & kjpindex, nvm |
|---|
| 5431 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5432 | ENDIF |
|---|
| 5433 | species_change_map(:,:)=0 |
|---|
| 5434 | |
|---|
| 5435 | ALLOCATE(fm_change_map(kjpindex,nvm),stat=ier) |
|---|
| 5436 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5437 | IF (l_error) THEN |
|---|
| 5438 | WRITE(numout,*) 'Memory allocation error for fm_change_map. We stop. We need kjpindex*nvm words', & |
|---|
| 5439 | & kjpindex, nvm |
|---|
| 5440 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5441 | ENDIF |
|---|
| 5442 | fm_change_map(:,:)=0 |
|---|
| 5443 | |
|---|
| 5444 | ALLOCATE(lpft_replant(kjpindex,nvm),stat=ier) |
|---|
| 5445 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5446 | IF (l_error) THEN |
|---|
| 5447 | WRITE(numout,*) 'Memory allocation error for lpft_replant. We stop. We need kjpindex*nvm words', & |
|---|
| 5448 | & kjpindex, nvm |
|---|
| 5449 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5450 | ENDIF |
|---|
| 5451 | lpft_replant(:,:)=.FALSE. |
|---|
| 5452 | |
|---|
| 5453 | ALLOCATE(age_stand(kjpindex,nvm),stat=ier) |
|---|
| 5454 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5455 | IF (l_error) THEN |
|---|
| 5456 | WRITE(numout,*) 'Memory allocation error for age_stand. We stop. We need kjpindex*nvm words', & |
|---|
| 5457 | & kjpindex, nvm |
|---|
| 5458 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5459 | ENDIF |
|---|
| 5460 | |
|---|
| 5461 | ALLOCATE(rotation_n(kjpindex,nvm),stat=ier) |
|---|
| 5462 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5463 | IF (l_error) THEN |
|---|
| 5464 | WRITE(numout,*) 'Memory allocation error for rotation_n. We stop. We need kjpindex*nvm words', & |
|---|
| 5465 | & kjpindex, nvm |
|---|
| 5466 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5467 | ENDIF |
|---|
| 5468 | |
|---|
| 5469 | ALLOCATE(last_cut(kjpindex,nvm),stat=ier) |
|---|
| 5470 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5471 | IF (l_error) THEN |
|---|
| 5472 | WRITE(numout,*) 'Memory allocation error for last_cut. We stop. We need kjpindex*nvm words', & |
|---|
| 5473 | & kjpindex, nvm |
|---|
| 5474 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5475 | ENDIF |
|---|
| 5476 | |
|---|
| 5477 | ALLOCATE(sigma(kjpindex,nvm),stat=ier) |
|---|
| 5478 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5479 | IF (l_error) THEN |
|---|
| 5480 | WRITE(numout,*) 'Memory allocation error for sigma. We stop. We need kjpindex*nvm words', & |
|---|
| 5481 | & kjpindex, nvm |
|---|
| 5482 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5483 | ENDIF |
|---|
| 5484 | |
|---|
| 5485 | ALLOCATE(litter_demand(kjpindex),stat=ier) |
|---|
| 5486 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5487 | IF (l_error) THEN |
|---|
| 5488 | WRITE(numout,*) ' Memory allocation error for litter_demand. ' // & |
|---|
| 5489 | 'We stop. We need kjpindex words = ',& |
|---|
| 5490 | kjpindex |
|---|
| 5491 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5492 | ENDIF |
|---|
| 5493 | |
|---|
| 5494 | ALLOCATE(wstress_season(kjpindex,nvm),stat=ier) |
|---|
| 5495 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5496 | IF (l_error) THEN |
|---|
| 5497 | WRITE(numout,*) ' Memory allocation error for wstress_season. ' // & |
|---|
| 5498 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5499 | kjpindex, nvm |
|---|
| 5500 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5501 | ENDIF |
|---|
| 5502 | |
|---|
| 5503 | ALLOCATE(wstress_month(kjpindex,nvm),stat=ier) |
|---|
| 5504 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5505 | IF (l_error) THEN |
|---|
| 5506 | WRITE(numout,*) ' Memory allocation error for wstress_month. ' // & |
|---|
| 5507 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5508 | kjpindex, nvm |
|---|
| 5509 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5510 | ENDIF |
|---|
| 5511 | |
|---|
| 5512 | ALLOCATE (deepSOM_a(kjpindex, ngrnd,nvm,nelements), stat=ier) |
|---|
| 5513 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for deepSOM_a','','') |
|---|
| 5514 | |
|---|
| 5515 | ALLOCATE (deepSOM_s(kjpindex, ngrnd,nvm,nelements), stat=ier) |
|---|
| 5516 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for deepSOM_s','','') |
|---|
| 5517 | |
|---|
| 5518 | ALLOCATE (deepSOM_p(kjpindex, ngrnd,nvm,nelements), stat=ier) |
|---|
| 5519 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for deepSOM_p','','') |
|---|
| 5520 | |
|---|
| 5521 | ALLOCATE (O2_soil(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5522 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for O2_soil','','') |
|---|
| 5523 | |
|---|
| 5524 | ALLOCATE (CH4_soil(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5525 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for CH4_soil','','') |
|---|
| 5526 | |
|---|
| 5527 | ALLOCATE (O2_snow(kjpindex, nsnow,nvm), stat=ier) |
|---|
| 5528 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for O2_snow','','') |
|---|
| 5529 | |
|---|
| 5530 | ALLOCATE (CH4_snow(kjpindex, nsnow,nvm), stat=ier) |
|---|
| 5531 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for CH4_snow','','') |
|---|
| 5532 | |
|---|
| 5533 | ALLOCATE (tdeep_daily(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5534 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for tdeep_daily','','') |
|---|
| 5535 | |
|---|
| 5536 | ALLOCATE (fbact(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5537 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for fbact','','') |
|---|
| 5538 | |
|---|
| 5539 | ALLOCATE (decomp_rate(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5540 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for decomp_rate','','') |
|---|
| 5541 | decomp_rate=0.0 |
|---|
| 5542 | |
|---|
| 5543 | ALLOCATE (decomp_rate_daily(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5544 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for decomp_rate_daily','','') |
|---|
| 5545 | |
|---|
| 5546 | ALLOCATE (hsdeep_daily(kjpindex, ngrnd,nvm), stat=ier) |
|---|
| 5547 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for hsdeep_daily','','') |
|---|
| 5548 | |
|---|
| 5549 | ALLOCATE (temp_sol_daily(kjpindex), stat=ier) |
|---|
| 5550 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for temp_sol_daily','','') |
|---|
| 5551 | |
|---|
| 5552 | ALLOCATE (snow_daily(kjpindex), stat=ier) |
|---|
| 5553 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for snow_daily','','') |
|---|
| 5554 | |
|---|
| 5555 | ALLOCATE (pb_pa_daily(kjpindex), stat=ier) |
|---|
| 5556 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for pb_pa_daily','','') |
|---|
| 5557 | |
|---|
| 5558 | ALLOCATE(fixed_cryoturbation_depth(kjpindex,nvm),stat=ier ) |
|---|
| 5559 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for fixed_cryoturbation_depth','','') |
|---|
| 5560 | |
|---|
| 5561 | ALLOCATE (snowdz_daily(kjpindex,nsnow), stat=ier) |
|---|
| 5562 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for snowdz_daily','','') |
|---|
| 5563 | |
|---|
| 5564 | ALLOCATE (snowrho_daily(kjpindex,nsnow), stat=ier) |
|---|
| 5565 | IF (ier /= 0) CALL ipslerr_p(3,'stomate_init', 'Pb in alloc for snowrho_daily','','') |
|---|
| 5566 | |
|---|
| 5567 | tdeep_daily=zero |
|---|
| 5568 | hsdeep_daily=zero |
|---|
| 5569 | decomp_rate_daily=zero |
|---|
| 5570 | snow_daily=zero |
|---|
| 5571 | pb_pa_daily=zero |
|---|
| 5572 | temp_sol_daily=zero |
|---|
| 5573 | snowdz_daily=zero |
|---|
| 5574 | snowrho_daily=zero |
|---|
| 5575 | |
|---|
| 5576 | ALLOCATE (bm_sapl_2D(kjpindex,nvm,ncirc,nparts,nelements), stat=ier) |
|---|
| 5577 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5578 | IF (l_error) THEN |
|---|
| 5579 | WRITE(numout,*) 'Memory allocation error for bm_sapl_2D. We stop. ',kjpindex,nvm,nparts,nelements |
|---|
| 5580 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5581 | ENDIF |
|---|
| 5582 | bm_sapl_2D(:,:,:,:,:) = zero |
|---|
| 5583 | |
|---|
| 5584 | ALLOCATE(sugar_load(kjpindex,nvm),stat=ier) |
|---|
| 5585 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5586 | IF (l_error) THEN |
|---|
| 5587 | WRITE(numout,*) ' Memory allocation error for sugar_load. ' // & |
|---|
| 5588 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5589 | kjpindex, nvm |
|---|
| 5590 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5591 | ENDIF |
|---|
| 5592 | sugar_load(:,:) = un |
|---|
| 5593 | |
|---|
| 5594 | ALLOCATE(grow_season_len(kjpindex,nvm),stat=ier) |
|---|
| 5595 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5596 | IF (l_error) THEN |
|---|
| 5597 | WRITE(numout,*) ' Memory allocation error for grow_season_len. ' // & |
|---|
| 5598 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5599 | kjpindex, nvm |
|---|
| 5600 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5601 | ENDIF |
|---|
| 5602 | |
|---|
| 5603 | ALLOCATE(doy_start_gs(kjpindex,nvm),stat=ier) |
|---|
| 5604 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5605 | IF (l_error) THEN |
|---|
| 5606 | WRITE(numout,*) ' Memory allocation error for doy_start_gs. ' // & |
|---|
| 5607 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5608 | kjpindex, nvm |
|---|
| 5609 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5610 | ENDIF |
|---|
| 5611 | |
|---|
| 5612 | ALLOCATE(doy_end_gs(kjpindex,nvm),stat=ier) |
|---|
| 5613 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5614 | IF (l_error) THEN |
|---|
| 5615 | WRITE(numout,*) ' Memory allocation error for doy_end_gs. ' // & |
|---|
| 5616 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5617 | kjpindex, nvm |
|---|
| 5618 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5619 | ENDIF |
|---|
| 5620 | |
|---|
| 5621 | ALLOCATE(mean_start_gs(kjpindex,nvm),stat=ier) |
|---|
| 5622 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5623 | IF (l_error) THEN |
|---|
| 5624 | WRITE(numout,*) ' Memory allocation error for mean_start_gs. ' // & |
|---|
| 5625 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5626 | kjpindex, nvm |
|---|
| 5627 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5628 | ENDIF |
|---|
| 5629 | |
|---|
| 5630 | ! bark beetle module. Initialize the variable here so they all have a value |
|---|
| 5631 | ! of zero when the bark beetle module is not used. |
|---|
| 5632 | ALLOCATE (wood_leftover_legacy(kjpindex,nvm,legacy_years),stat=ier) |
|---|
| 5633 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for wood_leftover_legacy','','') |
|---|
| 5634 | wood_leftover_legacy(:,:,:) = zero |
|---|
| 5635 | |
|---|
| 5636 | ALLOCATE (season_drought_legacy(kjpindex,nvm,legacy_years),stat=ier) |
|---|
| 5637 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for season_drought_legacy','','') |
|---|
| 5638 | season_drought_legacy(:,:,:) = zero |
|---|
| 5639 | |
|---|
| 5640 | |
|---|
| 5641 | ALLOCATE (beetle_pop_legacy(kjpindex,nvm,legacy_years),stat=ier) |
|---|
| 5642 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for beetle_pop_legacy','','') |
|---|
| 5643 | beetle_pop_legacy(:,:,:) = zero |
|---|
| 5644 | |
|---|
| 5645 | ALLOCATE (beetle_damage_legacy(kjpindex,nvm,beetle_legacy),stat=ier) |
|---|
| 5646 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for beetle_damage_legacy','','') |
|---|
| 5647 | beetle_damage_legacy(:,:,:) = zero |
|---|
| 5648 | |
|---|
| 5649 | ALLOCATE (beetle_flyaway(kjpindex,nvm),stat=ier) |
|---|
| 5650 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for beetle_flyaway','','') |
|---|
| 5651 | beetle_flyaway(:,:) = un |
|---|
| 5652 | |
|---|
| 5653 | ALLOCATE (beetle_generation_index(kjpindex,nvm,legacy_years),stat=ier) |
|---|
| 5654 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for beetle_generation_index','','') |
|---|
| 5655 | beetle_generation_index(:,:,:) = zero |
|---|
| 5656 | |
|---|
| 5657 | ALLOCATE (risk_index_legacy(kjpindex,nvm,legacy_years),stat=ier) |
|---|
| 5658 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for risk_index','','') |
|---|
| 5659 | risk_index_legacy(:,:,:) = zero |
|---|
| 5660 | |
|---|
| 5661 | ALLOCATE (epidemic_monitor(kjpindex,nvm),stat=ier) |
|---|
| 5662 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for epidemic_monitor','','') |
|---|
| 5663 | epidemic_monitor(:,:) = zero |
|---|
| 5664 | |
|---|
| 5665 | ALLOCATE (epidemic(kjpindex,nvm),stat=ier) |
|---|
| 5666 | IF (ier /= 0) CALL ipslerr_p(3,'sechiba_init','Pb in alloc for epidemic','','') |
|---|
| 5667 | epidemic(:,:) = zero |
|---|
| 5668 | |
|---|
| 5669 | ALLOCATE(windthrow_suscept_monitor(kjpindex,nvm),stat=ier) |
|---|
| 5670 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5671 | IF (l_error) THEN |
|---|
| 5672 | WRITE(numout,*) ' Memory allocation error for windthrow_suscept_monitor. ' // & |
|---|
| 5673 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5674 | kjpindex, nvm |
|---|
| 5675 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5676 | ENDIF |
|---|
| 5677 | |
|---|
| 5678 | ALLOCATE(beetle_pressure_monitor(kjpindex,nvm),stat=ier) |
|---|
| 5679 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5680 | IF (l_error) THEN |
|---|
| 5681 | WRITE(numout,*) ' Memory allocation error for beetle_pressure_monitor. ' // & |
|---|
| 5682 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5683 | kjpindex, nvm |
|---|
| 5684 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5685 | ENDIF |
|---|
| 5686 | |
|---|
| 5687 | ALLOCATE(suscept_index_monitor(kjpindex,nvm),stat=ier) |
|---|
| 5688 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5689 | IF (l_error) THEN |
|---|
| 5690 | WRITE(numout,*) ' Memory allocation error for suscept_index_monitor. ' // & |
|---|
| 5691 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5692 | kjpindex, nvm |
|---|
| 5693 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5694 | ENDIF |
|---|
| 5695 | |
|---|
| 5696 | !! 5. File definitions |
|---|
| 5697 | |
|---|
| 5698 | ! Store history and restart files in common variables |
|---|
| 5699 | hist_id_stomate = hist_id_stom |
|---|
| 5700 | hist_id_stomate_IPCC = hist_id_stom_IPCC |
|---|
| 5701 | rest_id_stomate = rest_id_stom |
|---|
| 5702 | |
|---|
| 5703 | ! In STOMATE reduced grids are used containing only terrestrial pixels. |
|---|
| 5704 | ! Build a new indexing table for the vegetation fields separating |
|---|
| 5705 | ! between the different PFTs. Note that ::index has dimension (kjpindex) |
|---|
| 5706 | ! wheras ::indexpft has dimension (kjpindex*nvm). |
|---|
| 5707 | |
|---|
| 5708 | hori_index(:) = index(:) |
|---|
| 5709 | |
|---|
| 5710 | DO j = 1, nvm |
|---|
| 5711 | DO ji = 1, kjpindex |
|---|
| 5712 | horipft_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5713 | ENDDO |
|---|
| 5714 | ENDDO |
|---|
| 5715 | |
|---|
| 5716 | DO j = 1, nlevels_tot |
|---|
| 5717 | DO ji = 1, kjpindex |
|---|
| 5718 | horican_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5719 | ENDDO |
|---|
| 5720 | ENDDO |
|---|
| 5721 | |
|---|
| 5722 | DO j = 1, ncut_times |
|---|
| 5723 | DO ji = 1, kjpindex |
|---|
| 5724 | horicut_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5725 | ENDDO |
|---|
| 5726 | ENDDO |
|---|
| 5727 | |
|---|
| 5728 | ! Similar index tables are build for the wood use |
|---|
| 5729 | DO j = 1, nshort |
|---|
| 5730 | DO ji = 1, kjpindex |
|---|
| 5731 | horip_s_index((j-1)*kjpindex+ji) = & |
|---|
| 5732 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5733 | ENDDO |
|---|
| 5734 | ENDDO |
|---|
| 5735 | |
|---|
| 5736 | DO j = 1, nmedium |
|---|
| 5737 | DO ji = 1, kjpindex |
|---|
| 5738 | horip_m_index((j-1)*kjpindex+ji) = & |
|---|
| 5739 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5740 | ENDDO |
|---|
| 5741 | ENDDO |
|---|
| 5742 | |
|---|
| 5743 | DO j = 1, nlong |
|---|
| 5744 | DO ji = 1, kjpindex |
|---|
| 5745 | horip_l_index((j-1)*kjpindex+ji) = & |
|---|
| 5746 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5747 | ENDDO |
|---|
| 5748 | ENDDO |
|---|
| 5749 | |
|---|
| 5750 | DO j = 1, nshort+1 |
|---|
| 5751 | DO ji = 1, kjpindex |
|---|
| 5752 | horip_ss_index((j-1)*kjpindex+ji) = & |
|---|
| 5753 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5754 | ENDDO |
|---|
| 5755 | ENDDO |
|---|
| 5756 | |
|---|
| 5757 | DO j = 1, nmedium+1 |
|---|
| 5758 | DO ji = 1, kjpindex |
|---|
| 5759 | horip_mm_index((j-1)*kjpindex+ji) = & |
|---|
| 5760 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5761 | ENDDO |
|---|
| 5762 | ENDDO |
|---|
| 5763 | |
|---|
| 5764 | DO j = 1, nlong+1 |
|---|
| 5765 | DO ji = 1, kjpindex |
|---|
| 5766 | horip_ll_index((j-1)*kjpindex+ji) = & |
|---|
| 5767 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5768 | ENDDO |
|---|
| 5769 | ENDDO |
|---|
| 5770 | |
|---|
| 5771 | |
|---|
| 5772 | !! 6. Initialization of global and land cover change variables. |
|---|
| 5773 | |
|---|
| 5774 | ! All variables are cumulative variables. bm_to_litter is not and is therefore |
|---|
| 5775 | ! excluded |
|---|
| 5776 | turnover_daily(:,:,:,:) = zero |
|---|
| 5777 | resp_hetero_d(:,:) = zero |
|---|
| 5778 | resp_hetero_litter_d(:,:) = zero |
|---|
| 5779 | resp_hetero_soil_d(:,:) = zero |
|---|
| 5780 | som_input_daily(:,:,:,:) = zero |
|---|
| 5781 | drainage_daily(:,:) = zero |
|---|
| 5782 | atm_to_bm_daily(:,:,:) = zero |
|---|
| 5783 | leaching_daily(:,:,:) = zero |
|---|
| 5784 | emission_daily(:,:,:) = zero |
|---|
| 5785 | n_input_daily(:,:,:) = zero |
|---|
| 5786 | woodharvestpft(:,:) = zero |
|---|
| 5787 | fpc_max(:,:)=zero |
|---|
| 5788 | |
|---|
| 5789 | ! n variables |
|---|
| 5790 | nstress_season(:,:) = zero |
|---|
| 5791 | soil_n_min(:,:,:) = zero |
|---|
| 5792 | plant_n_uptake_daily(:,:,:)=zero |
|---|
| 5793 | n_mineralisation_d(:,:)=zero |
|---|
| 5794 | |
|---|
| 5795 | fDeforestToProduct(:,:)=zero |
|---|
| 5796 | fLulccResidue(:,:)=zero |
|---|
| 5797 | fHarvestToProduct(:,:)=zero |
|---|
| 5798 | |
|---|
| 5799 | END SUBROUTINE stomate_init |
|---|
| 5800 | |
|---|
| 5801 | |
|---|
| 5802 | !! ================================================================================================================================ |
|---|
| 5803 | !! SUBROUTINE : stomate_clear |
|---|
| 5804 | !! |
|---|
| 5805 | !>\BRIEF Deallocate memory of the stomate variables. |
|---|
| 5806 | !! |
|---|
| 5807 | !! DESCRIPTION : None |
|---|
| 5808 | !! |
|---|
| 5809 | !! RECENT CHANGE(S) : None |
|---|
| 5810 | !! |
|---|
| 5811 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 5812 | !! |
|---|
| 5813 | !! REFERENCES : None |
|---|
| 5814 | !! |
|---|
| 5815 | !! FLOWCHART : None |
|---|
| 5816 | !! \n |
|---|
| 5817 | !_ ================================================================================================================================ |
|---|
| 5818 | |
|---|
| 5819 | SUBROUTINE stomate_clear |
|---|
| 5820 | |
|---|
| 5821 | !! Deallocate all dynamics variables |
|---|
| 5822 | IF (ALLOCATED(adapted)) DEALLOCATE(adapted) |
|---|
| 5823 | IF (ALLOCATED(regenerate)) DEALLOCATE(regenerate) |
|---|
| 5824 | IF (ALLOCATED(vegstress_day)) DEALLOCATE(vegstress_day) |
|---|
| 5825 | IF (ALLOCATED(transpir_supply_daily)) DEALLOCATE(transpir_supply_daily) |
|---|
| 5826 | IF (ALLOCATED(vir_transpir_supply_daily)) DEALLOCATE(vir_transpir_supply_daily) |
|---|
| 5827 | IF (ALLOCATED(transpir_daily)) DEALLOCATE(transpir_daily) |
|---|
| 5828 | IF (ALLOCATED(gdd_init_date)) DEALLOCATE(gdd_init_date) |
|---|
| 5829 | IF (ALLOCATED(litterhum_daily)) DEALLOCATE(litterhum_daily) |
|---|
| 5830 | IF (ALLOCATED(t2m_daily)) DEALLOCATE(t2m_daily) |
|---|
| 5831 | IF (ALLOCATED(t2m_min_daily)) DEALLOCATE(t2m_min_daily) |
|---|
| 5832 | IF (ALLOCATED(tsurf_daily)) DEALLOCATE(tsurf_daily) |
|---|
| 5833 | IF (ALLOCATED(tsoil_daily)) DEALLOCATE(tsoil_daily) |
|---|
| 5834 | IF (ALLOCATED(precip_daily)) DEALLOCATE(precip_daily) |
|---|
| 5835 | IF (ALLOCATED(gpp_daily)) DEALLOCATE(gpp_daily) |
|---|
| 5836 | IF (ALLOCATED(npp_daily)) DEALLOCATE(npp_daily) |
|---|
| 5837 | IF (ALLOCATED(turnover_daily)) DEALLOCATE(turnover_daily) |
|---|
| 5838 | IF (ALLOCATED(turnover_resid)) DEALLOCATE(turnover_resid) |
|---|
| 5839 | IF (ALLOCATED(turnover_littercalc)) DEALLOCATE(turnover_littercalc) |
|---|
| 5840 | IF (ALLOCATED(vegstress_month)) DEALLOCATE(vegstress_month) |
|---|
| 5841 | IF (ALLOCATED(vegstress_week)) DEALLOCATE(vegstress_week) |
|---|
| 5842 | IF (ALLOCATED(vegstress_season)) DEALLOCATE(vegstress_season) |
|---|
| 5843 | IF (ALLOCATED(t2m_longterm)) DEALLOCATE(t2m_longterm) |
|---|
| 5844 | IF (ALLOCATED(t2m_month)) DEALLOCATE(t2m_month) |
|---|
| 5845 | IF (ALLOCATED(Tseason)) DEALLOCATE(Tseason) |
|---|
| 5846 | IF (ALLOCATED(Tseason_length)) DEALLOCATE(Tseason_length) |
|---|
| 5847 | IF (ALLOCATED(Tseason_tmp)) DEALLOCATE(Tseason_tmp) |
|---|
| 5848 | IF (ALLOCATED(Tmin_spring_time)) DEALLOCATE(Tmin_spring_time) |
|---|
| 5849 | IF (ALLOCATED(t2m_week)) DEALLOCATE(t2m_week) |
|---|
| 5850 | IF (ALLOCATED(tsoil_month)) DEALLOCATE(tsoil_month) |
|---|
| 5851 | IF (ALLOCATED(fireindex)) DEALLOCATE(fireindex) |
|---|
| 5852 | IF (ALLOCATED(firelitter)) DEALLOCATE(firelitter) |
|---|
| 5853 | IF (ALLOCATED(maxvegstress_lastyear)) DEALLOCATE(maxvegstress_lastyear) |
|---|
| 5854 | IF (ALLOCATED(maxvegstress_thisyear)) DEALLOCATE(maxvegstress_thisyear) |
|---|
| 5855 | IF (ALLOCATED(minvegstress_lastyear)) DEALLOCATE(minvegstress_lastyear) |
|---|
| 5856 | IF (ALLOCATED(minvegstress_thisyear)) DEALLOCATE(minvegstress_thisyear) |
|---|
| 5857 | IF (ALLOCATED(maxgppweek_lastyear)) DEALLOCATE(maxgppweek_lastyear) |
|---|
| 5858 | IF (ALLOCATED(maxgppweek_thisyear)) DEALLOCATE(maxgppweek_thisyear) |
|---|
| 5859 | IF (ALLOCATED(gdd0_lastyear)) DEALLOCATE(gdd0_lastyear) |
|---|
| 5860 | IF (ALLOCATED(gdd0_thisyear)) DEALLOCATE(gdd0_thisyear) |
|---|
| 5861 | IF (ALLOCATED(precip_lastyear)) DEALLOCATE(precip_lastyear) |
|---|
| 5862 | IF (ALLOCATED(precip_thisyear)) DEALLOCATE(precip_thisyear) |
|---|
| 5863 | IF (ALLOCATED(gdd_m5_dormance)) DEALLOCATE(gdd_m5_dormance) |
|---|
| 5864 | IF (ALLOCATED(gdd_from_growthinit)) DEALLOCATE(gdd_from_growthinit) |
|---|
| 5865 | IF (ALLOCATED(gdd_midwinter)) DEALLOCATE(gdd_midwinter) |
|---|
| 5866 | IF (ALLOCATED(ncd_dormance)) DEALLOCATE(ncd_dormance) |
|---|
| 5867 | IF (ALLOCATED(ngd_minus5)) DEALLOCATE(ngd_minus5) |
|---|
| 5868 | IF (ALLOCATED(PFTpresent)) DEALLOCATE(PFTpresent) |
|---|
| 5869 | IF (ALLOCATED(is_storm)) DEALLOCATE(is_storm) |
|---|
| 5870 | IF (ALLOCATED(count_storm)) DEALLOCATE(count_storm) |
|---|
| 5871 | IF (ALLOCATED(npp_longterm)) DEALLOCATE(npp_longterm) |
|---|
| 5872 | IF (ALLOCATED(croot_longterm)) DEALLOCATE(croot_longterm) |
|---|
| 5873 | IF (ALLOCATED(n_reserve_longterm)) DEALLOCATE(n_reserve_longterm) |
|---|
| 5874 | IF (ALLOCATED(lm_lastyearmax)) DEALLOCATE(lm_lastyearmax) |
|---|
| 5875 | IF (ALLOCATED(lm_thisyearmax)) DEALLOCATE(lm_thisyearmax) |
|---|
| 5876 | IF (ALLOCATED(maxfpc_lastyear)) DEALLOCATE(maxfpc_lastyear) |
|---|
| 5877 | IF (ALLOCATED(maxfpc_thisyear)) DEALLOCATE(maxfpc_thisyear) |
|---|
| 5878 | IF (ALLOCATED(turnover_longterm)) DEALLOCATE(turnover_longterm) |
|---|
| 5879 | IF (ALLOCATED(gpp_week)) DEALLOCATE(gpp_week) |
|---|
| 5880 | IF (ALLOCATED(resp_maint_week)) DEALLOCATE(resp_maint_week) |
|---|
| 5881 | IF (ALLOCATED(plant_status)) DEALLOCATE(plant_status) |
|---|
| 5882 | IF (ALLOCATED(when_growthinit)) DEALLOCATE(when_growthinit) |
|---|
| 5883 | IF (ALLOCATED(age)) DEALLOCATE(age) |
|---|
| 5884 | IF (ALLOCATED(resp_hetero_d)) DEALLOCATE(resp_hetero_d) |
|---|
| 5885 | IF (ALLOCATED(resp_hetero_litter_d)) DEALLOCATE(resp_hetero_litter_d) |
|---|
| 5886 | IF (ALLOCATED(resp_hetero_soil_d)) DEALLOCATE(resp_hetero_soil_d) |
|---|
| 5887 | IF (ALLOCATED(resp_hetero_radia)) DEALLOCATE(resp_hetero_radia) |
|---|
| 5888 | IF (ALLOCATED(resp_maint_d)) DEALLOCATE(resp_maint_d) |
|---|
| 5889 | IF (ALLOCATED(resp_growth_d)) DEALLOCATE(resp_growth_d) |
|---|
| 5890 | IF (ALLOCATED(co2_fire)) DEALLOCATE(co2_fire) |
|---|
| 5891 | IF (ALLOCATED(atm_to_bm)) DEALLOCATE(atm_to_bm) |
|---|
| 5892 | IF (ALLOCATED(veget_lastlight)) DEALLOCATE(veget_lastlight) |
|---|
| 5893 | IF (ALLOCATED(everywhere)) DEALLOCATE(everywhere) |
|---|
| 5894 | IF (ALLOCATED(need_adjacent)) DEALLOCATE(need_adjacent) |
|---|
| 5895 | IF (ALLOCATED(leaf_age)) DEALLOCATE(leaf_age) |
|---|
| 5896 | IF (ALLOCATED(leaf_frac)) DEALLOCATE(leaf_frac) |
|---|
| 5897 | IF (ALLOCATED(RIP_time)) DEALLOCATE(RIP_time) |
|---|
| 5898 | IF (ALLOCATED(time_hum_min)) DEALLOCATE(time_hum_min) |
|---|
| 5899 | IF (ALLOCATED(hum_min_dormance)) DEALLOCATE(hum_min_dormance) |
|---|
| 5900 | IF (ALLOCATED(litter)) DEALLOCATE(litter) |
|---|
| 5901 | IF (ALLOCATED(dead_leaves)) DEALLOCATE(dead_leaves) |
|---|
| 5902 | IF (ALLOCATED(som)) DEALLOCATE(som) |
|---|
| 5903 | IF (ALLOCATED(som_surf)) DEALLOCATE(som_surf) |
|---|
| 5904 | IF (ALLOCATED(lignin_struc)) DEALLOCATE(lignin_struc) |
|---|
| 5905 | IF (ALLOCATED(burried_litter)) DEALLOCATE(burried_litter) |
|---|
| 5906 | IF (ALLOCATED(burried_fresh_ltr)) DEALLOCATE(burried_fresh_ltr) |
|---|
| 5907 | IF (ALLOCATED(burried_fresh_som)) DEALLOCATE(burried_fresh_som) |
|---|
| 5908 | IF (ALLOCATED(burried_bact)) DEALLOCATE(burried_bact) |
|---|
| 5909 | IF (ALLOCATED(burried_fungivores)) DEALLOCATE(burried_fungivores) |
|---|
| 5910 | IF (ALLOCATED(burried_min_nitro)) DEALLOCATE(burried_min_nitro) |
|---|
| 5911 | IF (ALLOCATED(burried_som)) DEALLOCATE(burried_som) |
|---|
| 5912 | IF (ALLOCATED(burried_deepSOM_a)) DEALLOCATE(burried_deepSOM_a) |
|---|
| 5913 | IF (ALLOCATED(burried_deepSOM_s)) DEALLOCATE(burried_deepSOM_s) |
|---|
| 5914 | IF (ALLOCATED(burried_deepSOM_p)) DEALLOCATE(burried_deepSOM_p) |
|---|
| 5915 | IF (ALLOCATED(lignin_wood)) DEALLOCATE(lignin_wood) |
|---|
| 5916 | IF (ALLOCATED(turnover_time)) DEALLOCATE(turnover_time) |
|---|
| 5917 | IF (ALLOCATED(bm_to_litter)) DEALLOCATE(bm_to_litter) |
|---|
| 5918 | IF (ALLOCATED(bm_to_litter_resid)) DEALLOCATE(bm_to_litter_resid) |
|---|
| 5919 | IF (ALLOCATED(tree_bm_to_litter)) DEALLOCATE(tree_bm_to_litter) |
|---|
| 5920 | IF (ALLOCATED(tree_bm_to_litter_resid)) DEALLOCATE(tree_bm_to_litter_resid) |
|---|
| 5921 | IF (ALLOCATED(bm_to_littercalc)) DEALLOCATE(bm_to_littercalc) |
|---|
| 5922 | IF (ALLOCATED(tree_bm_to_littercalc)) DEALLOCATE(tree_bm_to_littercalc) |
|---|
| 5923 | IF (ALLOCATED(herbivores)) DEALLOCATE(herbivores) |
|---|
| 5924 | IF (ALLOCATED(resp_maint_part_radia)) DEALLOCATE(resp_maint_part_radia) |
|---|
| 5925 | IF (ALLOCATED(resp_maint_part)) DEALLOCATE(resp_maint_part) |
|---|
| 5926 | IF (ALLOCATED(hori_index)) DEALLOCATE(hori_index) |
|---|
| 5927 | IF (ALLOCATED(horipft_index)) DEALLOCATE(horipft_index) |
|---|
| 5928 | IF (ALLOCATED(horican_index)) DEALLOCATE(horican_index) |
|---|
| 5929 | IF (ALLOCATED(horicut_index)) DEALLOCATE(horicut_index) |
|---|
| 5930 | IF (ALLOCATED(horip_s_index)) DEALLOCATE (horip_s_index) |
|---|
| 5931 | IF (ALLOCATED(horip_m_index)) DEALLOCATE (horip_m_index) |
|---|
| 5932 | IF (ALLOCATED(horip_l_index)) DEALLOCATE (horip_l_index) |
|---|
| 5933 | IF (ALLOCATED(horip_ss_index)) DEALLOCATE (horip_ss_index) |
|---|
| 5934 | IF (ALLOCATED(horip_mm_index)) DEALLOCATE (horip_mm_index) |
|---|
| 5935 | IF (ALLOCATED(horip_ll_index)) DEALLOCATE (horip_ll_index) |
|---|
| 5936 | ! |
|---|
| 5937 | IF (ALLOCATED(ok_equilibrium)) DEALLOCATE(ok_equilibrium) |
|---|
| 5938 | IF (ALLOCATED(carbon_eq)) DEALLOCATE(carbon_eq) |
|---|
| 5939 | IF (ALLOCATED(matrixA)) DEALLOCATE(matrixA) |
|---|
| 5940 | IF (ALLOCATED(vectorB)) DEALLOCATE(vectorB) |
|---|
| 5941 | IF (ALLOCATED(matrixV)) DEALLOCATE(matrixV) |
|---|
| 5942 | IF (ALLOCATED(vectorU)) DEALLOCATE(vectorU) |
|---|
| 5943 | IF (ALLOCATED(matrixW)) DEALLOCATE(matrixW) |
|---|
| 5944 | IF (ALLOCATED(previous_stock)) DEALLOCATE(previous_stock) |
|---|
| 5945 | IF (ALLOCATED(current_stock)) DEALLOCATE(current_stock) |
|---|
| 5946 | IF (ALLOCATED(sigma)) DEALLOCATE (sigma) |
|---|
| 5947 | IF (ALLOCATED(age_stand)) DEALLOCATE (age_stand) |
|---|
| 5948 | IF (ALLOCATED(rotation_n)) DEALLOCATE (rotation_n) |
|---|
| 5949 | IF (ALLOCATED(last_cut)) DEALLOCATE (last_cut) |
|---|
| 5950 | IF (ALLOCATED(CN_som_litter_longterm)) DEALLOCATE(CN_som_litter_longterm) |
|---|
| 5951 | IF (ALLOCATED(KF)) DEALLOCATE (KF) |
|---|
| 5952 | IF (ALLOCATED(k_latosa_adapt)) DEALLOCATE (k_latosa_adapt) |
|---|
| 5953 | IF (ALLOCATED(harvest_pool_acc)) DEALLOCATE (harvest_pool_acc) |
|---|
| 5954 | IF (ALLOCATED(harvest_type)) DEALLOCATE (harvest_type) |
|---|
| 5955 | IF (ALLOCATED(harvest_cut)) DEALLOCATE (harvest_cut) |
|---|
| 5956 | IF (ALLOCATED(harvest_area_acc)) DEALLOCATE (harvest_area_acc) |
|---|
| 5957 | IF (ALLOCATED(gap_area_save)) DEALLOCATE (gap_area_save) |
|---|
| 5958 | IF (ALLOCATED(total_ba_init)) DEALLOCATE (total_ba_init) |
|---|
| 5959 | IF (ALLOCATED(harvest_pool_bound)) DEALLOCATE (harvest_pool_bound) |
|---|
| 5960 | IF (ALLOCATED(risk_index)) DEALLOCATE (risk_index) |
|---|
| 5961 | IF (ALLOCATED(sumTeff)) DEALLOCATE (sumTeff) |
|---|
| 5962 | IF (ALLOCATED(beetle_diapause)) DEALLOCATE (beetle_diapause) |
|---|
| 5963 | IF (ALLOCATED(prod_s)) DEALLOCATE (prod_s) |
|---|
| 5964 | IF (ALLOCATED(prod_m)) DEALLOCATE (prod_m) |
|---|
| 5965 | IF (ALLOCATED(prod_l)) DEALLOCATE (prod_l) |
|---|
| 5966 | IF (ALLOCATED(flux_s)) DEALLOCATE (flux_s) |
|---|
| 5967 | IF (ALLOCATED(flux_m)) DEALLOCATE (flux_m) |
|---|
| 5968 | IF (ALLOCATED(flux_l)) DEALLOCATE (flux_l) |
|---|
| 5969 | IF (ALLOCATED(flux_prod_s)) DEALLOCATE (flux_prod_s) |
|---|
| 5970 | IF (ALLOCATED(flux_prod_m)) DEALLOCATE (flux_prod_m) |
|---|
| 5971 | IF (ALLOCATED(flux_prod_l)) DEALLOCATE (flux_prod_l) |
|---|
| 5972 | |
|---|
| 5973 | IF (ALLOCATED(mai)) DEALLOCATE (mai) |
|---|
| 5974 | IF (ALLOCATED(pai)) DEALLOCATE (pai) |
|---|
| 5975 | IF (ALLOCATED(previous_wood_volume)) DEALLOCATE (previous_wood_volume) |
|---|
| 5976 | IF (ALLOCATED(mai_count)) DEALLOCATE (mai_count) |
|---|
| 5977 | IF (ALLOCATED(coppice_dens)) DEALLOCATE (coppice_dens) |
|---|
| 5978 | IF (ALLOCATED(litter_demand)) DEALLOCATE (litter_demand) |
|---|
| 5979 | IF (ALLOCATED(wstress_season)) DEALLOCATE (wstress_season) |
|---|
| 5980 | IF (ALLOCATED(wstress_month)) DEALLOCATE (wstress_month) |
|---|
| 5981 | IF (ALLOCATED(rue_longterm)) DEALLOCATE (rue_longterm) |
|---|
| 5982 | IF (ALLOCATED(bm_sapl_2D)) DEALLOCATE (bm_sapl_2D) |
|---|
| 5983 | IF (ALLOCATED(sugar_load)) DEALLOCATE (sugar_load) |
|---|
| 5984 | IF (ALLOCATED(nbp_accu_flux)) DEALLOCATE(nbp_accu_flux) |
|---|
| 5985 | IF (ALLOCATED(nbp_pool_start)) DEALLOCATE(nbp_pool_start) |
|---|
| 5986 | IF (ALLOCATED(nforce)) DEALLOCATE(nforce) |
|---|
| 5987 | IF (ALLOCATED(control_moist)) DEALLOCATE(control_moist) |
|---|
| 5988 | IF (ALLOCATED(control_temp)) DEALLOCATE(control_temp) |
|---|
| 5989 | IF (ALLOCATED(carbon_input)) DEALLOCATE(carbon_input) |
|---|
| 5990 | IF (ALLOCATED(nitrogen_input)) DEALLOCATE(nitrogen_input) |
|---|
| 5991 | IF ( ALLOCATED (co2_flux)) DEALLOCATE (co2_flux) |
|---|
| 5992 | IF ( ALLOCATED (fco2_lu)) DEALLOCATE (fco2_lu) |
|---|
| 5993 | IF ( ALLOCATED (fco2_wh)) DEALLOCATE (fco2_wh) |
|---|
| 5994 | IF ( ALLOCATED (fco2_ha)) DEALLOCATE (fco2_ha) |
|---|
| 5995 | IF ( ALLOCATED (woodharvestpft)) DEALLOCATE (woodharvestpft) |
|---|
| 5996 | IF ( ALLOCATED (fDeforestToProduct)) DEALLOCATE (fDeforestToProduct) |
|---|
| 5997 | IF ( ALLOCATED (fLulccResidue)) DEALLOCATE (fLulccResidue) |
|---|
| 5998 | IF ( ALLOCATED (fHarvestToProduct)) DEALLOCATE (fHarvestToProduct) |
|---|
| 5999 | IF ( ALLOCATED (som_input_daily)) DEALLOCATE (som_input_daily) |
|---|
| 6000 | |
|---|
| 6001 | IF ( ALLOCATED (drainage_daily)) DEALLOCATE(drainage_daily) |
|---|
| 6002 | IF ( ALLOCATED (plant_n_uptake_daily)) DEALLOCATE(plant_n_uptake_daily) |
|---|
| 6003 | IF ( ALLOCATED (n_mineralisation_d)) DEALLOCATE(n_mineralisation_d) |
|---|
| 6004 | IF ( ALLOCATED (atm_to_bm_daily)) DEALLOCATE(atm_to_bm_daily) |
|---|
| 6005 | IF ( ALLOCATED (emission_daily)) DEALLOCATE(emission_daily) |
|---|
| 6006 | IF ( ALLOCATED (leaching_daily)) DEALLOCATE(leaching_daily) |
|---|
| 6007 | IF ( ALLOCATED (n_input_daily)) DEALLOCATE(n_input_daily) |
|---|
| 6008 | IF ( ALLOCATED (cn_leaf_min_season)) DEALLOCATE (cn_leaf_min_season) |
|---|
| 6009 | IF ( ALLOCATED (nstress_season)) DEALLOCATE (nstress_season) |
|---|
| 6010 | IF ( ALLOCATED (soil_n_min)) DEALLOCATE (soil_n_min) |
|---|
| 6011 | IF ( ALLOCATED (p_O2)) DEALLOCATE (p_O2) |
|---|
| 6012 | IF ( ALLOCATED (bact)) DEALLOCATE (bact) |
|---|
| 6013 | IF ( ALLOCATED (fpc_max)) DEALLOCATE (fpc_max) |
|---|
| 6014 | |
|---|
| 6015 | IF (ALLOCATED(forest_managed)) DEALLOCATE (forest_managed) |
|---|
| 6016 | IF (ALLOCATED(spinup_clearcut)) DEALLOCATE (spinup_clearcut) |
|---|
| 6017 | IF (ALLOCATED(species_change_map)) DEALLOCATE (species_change_map) |
|---|
| 6018 | IF (ALLOCATED(fm_change_map)) DEALLOCATE (fm_change_map) |
|---|
| 6019 | IF (ALLOCATED(lpft_replant)) DEALLOCATE (lpft_replant) |
|---|
| 6020 | IF (ALLOCATED(grow_season_len)) DEALLOCATE (grow_season_len) |
|---|
| 6021 | IF (ALLOCATED(doy_start_gs)) DEALLOCATE (doy_start_gs) |
|---|
| 6022 | IF (ALLOCATED(doy_end_gs)) DEALLOCATE (doy_end_gs) |
|---|
| 6023 | IF (ALLOCATED(mean_start_gs)) DEALLOCATE (mean_start_gs) |
|---|
| 6024 | IF (ALLOCATED(windthrow_suscept_monitor)) DEALLOCATE(windthrow_suscept_monitor) |
|---|
| 6025 | IF (ALLOCATED(beetle_pressure_monitor)) DEALLOCATE (beetle_pressure_monitor) |
|---|
| 6026 | IF (ALLOCATED(suscept_index_monitor)) DEALLOCATE (suscept_index_monitor) |
|---|
| 6027 | IF ( ALLOCATED (wood_leftover_legacy)) DEALLOCATE (wood_leftover_legacy) |
|---|
| 6028 | IF ( ALLOCATED (season_drought_legacy)) DEALLOCATE (season_drought_legacy) |
|---|
| 6029 | IF ( ALLOCATED (beetle_generation_index)) DEALLOCATE(beetle_generation_index) |
|---|
| 6030 | IF ( ALLOCATED (risk_index_legacy))DEALLOCATE(risk_index_legacy) |
|---|
| 6031 | IF ( ALLOCATED (beetle_damage_legacy))DEALLOCATE(beetle_damage_legacy) |
|---|
| 6032 | IF ( ALLOCATED (beetle_flyaway))DEALLOCATE(beetle_flyaway) |
|---|
| 6033 | IF ( ALLOCATED (beetle_pop_legacy))DEALLOCATE(beetle_pop_legacy) |
|---|
| 6034 | IF ( ALLOCATED (epidemic))DEALLOCATE(epidemic) |
|---|
| 6035 | IF ( ALLOCATED (epidemic_monitor))DEALLOCATE(epidemic_monitor) |
|---|
| 6036 | |
|---|
| 6037 | !! 2. reset l_first |
|---|
| 6038 | |
|---|
| 6039 | l_first_stomate=.TRUE. |
|---|
| 6040 | |
|---|
| 6041 | !! 3. call to clear functions |
|---|
| 6042 | |
|---|
| 6043 | CALL season_pre_disturbance_clear |
|---|
| 6044 | CALL season_post_disturbance_clear |
|---|
| 6045 | CALL stomate_lpj_clear |
|---|
| 6046 | CALL littercalc_clear |
|---|
| 6047 | CALL vmax_clear |
|---|
| 6048 | CALL stomate_soil_carbon_discretization_clear |
|---|
| 6049 | |
|---|
| 6050 | IF ( ALLOCATED (deepSOM_a)) DEALLOCATE(deepSOM_a) |
|---|
| 6051 | IF ( ALLOCATED (deepSOM_s)) DEALLOCATE(deepSOM_s) |
|---|
| 6052 | IF ( ALLOCATED (deepSOM_p)) DEALLOCATE(deepSOM_p) |
|---|
| 6053 | IF ( ALLOCATED (O2_soil)) DEALLOCATE(O2_soil) |
|---|
| 6054 | IF ( ALLOCATED (CH4_soil)) DEALLOCATE(CH4_soil) |
|---|
| 6055 | IF ( ALLOCATED (O2_snow)) DEALLOCATE(O2_snow) |
|---|
| 6056 | IF ( ALLOCATED (CH4_snow)) DEALLOCATE(CH4_snow) |
|---|
| 6057 | IF ( ALLOCATED (tdeep_daily)) DEALLOCATE(tdeep_daily) |
|---|
| 6058 | IF ( ALLOCATED (fbact)) DEALLOCATE(fbact) |
|---|
| 6059 | IF ( ALLOCATED (decomp_rate)) DEALLOCATE(decomp_rate) |
|---|
| 6060 | IF ( ALLOCATED (decomp_rate_daily)) DEALLOCATE(decomp_rate_daily) |
|---|
| 6061 | IF ( ALLOCATED (hsdeep_daily)) DEALLOCATE(hsdeep_daily) |
|---|
| 6062 | IF ( ALLOCATED (temp_sol_daily)) DEALLOCATE(temp_sol_daily) |
|---|
| 6063 | IF ( ALLOCATED (som_input_daily)) DEALLOCATE(som_input_daily) |
|---|
| 6064 | IF ( ALLOCATED (pb_pa_daily)) DEALLOCATE(pb_pa_daily) |
|---|
| 6065 | IF ( ALLOCATED (snow_daily)) DEALLOCATE(snow_daily) |
|---|
| 6066 | IF ( ALLOCATED (fixed_cryoturbation_depth)) DEALLOCATE(fixed_cryoturbation_depth) |
|---|
| 6067 | IF ( ALLOCATED (snowdz_daily)) DEALLOCATE(snowdz_daily) |
|---|
| 6068 | IF ( ALLOCATED (snowrho_daily)) DEALLOCATE(snowrho_daily) |
|---|
| 6069 | END SUBROUTINE stomate_clear |
|---|
| 6070 | |
|---|
| 6071 | |
|---|
| 6072 | !! ================================================================================================================================ |
|---|
| 6073 | !! SUBROUTINE : stomate_var_init |
|---|
| 6074 | !! |
|---|
| 6075 | !>\BRIEF Initialize variables of stomate with a none-zero initial value. |
|---|
| 6076 | !! Subroutine is called only if ::ok_stomate = .TRUE. STOMATE diagnoses some |
|---|
| 6077 | !! variables for SECHIBA : assim_param, deadleaf_cover, etc. These variables can |
|---|
| 6078 | !! be recalculated from STOMATE's prognostic variables. |
|---|
| 6079 | !! |
|---|
| 6080 | !! DESCRIPTION : None |
|---|
| 6081 | !! |
|---|
| 6082 | !! RECENT CHANGE(S) : None |
|---|
| 6083 | !! |
|---|
| 6084 | !! MAIN OUTPUT VARIABLE(S): leaf age (::leaf_age) and fraction of leaves in leaf |
|---|
| 6085 | !! age class (::leaf_frac). The maximum water on vegetation available for |
|---|
| 6086 | !! interception, fraction of soil covered by dead leaves |
|---|
| 6087 | !! (::deadleaf_cover) and assimilation parameters (:: assim_param). |
|---|
| 6088 | !! |
|---|
| 6089 | !! REFERENCE(S) : None |
|---|
| 6090 | !! |
|---|
| 6091 | !! FLOWCHART : None |
|---|
| 6092 | !! \n |
|---|
| 6093 | !_ ================================================================================================================================ |
|---|
| 6094 | |
|---|
| 6095 | SUBROUTINE stomate_var_init & |
|---|
| 6096 | & (kjpindex, veget_max, leaf_age, leaf_frac, & |
|---|
| 6097 | & leaf_age_crit, dead_leaves, & |
|---|
| 6098 | & veget, deadleaf_cover, assim_param, & |
|---|
| 6099 | & circ_class_biomass, circ_class_n, sugar_load) |
|---|
| 6100 | |
|---|
| 6101 | |
|---|
| 6102 | !! 0. Variable and parameter declaration |
|---|
| 6103 | |
|---|
| 6104 | !! 0.1 Input variables |
|---|
| 6105 | |
|---|
| 6106 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only |
|---|
| 6107 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: veget !! Fraction of pixel covered by PFT. Fraction |
|---|
| 6108 | !! accounts for none-biological land covers |
|---|
| 6109 | !! (unitless) |
|---|
| 6110 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: veget_max !! Fractional coverage: maximum share of the pixel |
|---|
| 6111 | !! covered by a PFT (unitless) |
|---|
| 6112 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: dead_leaves !! Metabolic and structural fraction of dead leaves |
|---|
| 6113 | !! per ground area |
|---|
| 6114 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 6115 | REAL(r_std),DIMENSION(:,:,:,:,:), INTENT(in) :: circ_class_biomass !! @tex $(gC m^{-2})$ @endtex |
|---|
| 6116 | |
|---|
| 6117 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: circ_class_n !! @tex $(gC m^{-2})$ @endtex |
|---|
| 6118 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: leaf_age !! Age of different leaf classes per PFT (days) |
|---|
| 6119 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: leaf_frac !! Fraction of leaves in leaf age class per PFT |
|---|
| 6120 | !! (unitless; 1) |
|---|
| 6121 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: sugar_load !! Relative sugar loading of the labile pool (unitless) |
|---|
| 6122 | |
|---|
| 6123 | !! 0.2 Modified variables |
|---|
| 6124 | |
|---|
| 6125 | REAL(r_std),DIMENSION(:,:,:), INTENT(inout) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 6126 | !! photosynthesis |
|---|
| 6127 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 6128 | REAL(r_std),DIMENSION(:,:), INTENT(inout) :: leaf_age_crit !! critical leaf age (days) |
|---|
| 6129 | |
|---|
| 6130 | |
|---|
| 6131 | !! 0.3 Output variables |
|---|
| 6132 | |
|---|
| 6133 | REAL(r_std),DIMENSION(:), INTENT (out) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 6134 | !! (unitless) |
|---|
| 6135 | |
|---|
| 6136 | ! 0.4 Local variables |
|---|
| 6137 | |
|---|
| 6138 | REAL(r_std),PARAMETER :: dt_0 = zero !! Dummy time step, must be zero |
|---|
| 6139 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages) :: leaf_age_tmp !! Temporary variable |
|---|
| 6140 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages) :: leaf_frac_tmp !! Temporary variable |
|---|
| 6141 | !! (unitless; 1) |
|---|
| 6142 | INTEGER(i_std) :: j !! Index (untiless) |
|---|
| 6143 | |
|---|
| 6144 | !_ ================================================================================================================================ |
|---|
| 6145 | |
|---|
| 6146 | ! Only if stomate is activated |
|---|
| 6147 | IF (printlev>=4) WRITE(numout,*) 'Entering stomate_var_init' |
|---|
| 6148 | |
|---|
| 6149 | !! 1. photosynthesis parameters |
|---|
| 6150 | |
|---|
| 6151 | !! 1. Calculate assim_param if it was not found in the restart file |
|---|
| 6152 | IF (ALL(assim_param(:,:,:)==val_exp)) THEN |
|---|
| 6153 | ! Use temporary leaf_age_tmp and leaf_frac_tmp to preserve the input variables from being modified by the subroutine vmax. |
|---|
| 6154 | leaf_age_tmp(:,:,:)=leaf_age(:,:,:) |
|---|
| 6155 | leaf_frac_tmp(:,:,:)=leaf_frac(:,:,:) |
|---|
| 6156 | |
|---|
| 6157 | !! 1.1 Calculate a temporary vcmax (stomate_vmax.f90) |
|---|
| 6158 | CALL vmax (kjpindex, dt_0, leaf_age_tmp, leaf_frac_tmp, assim_param, & |
|---|
| 6159 | circ_class_biomass, circ_class_n, sugar_load, leaf_age_crit, & |
|---|
| 6160 | leaf_classes) |
|---|
| 6161 | END IF |
|---|
| 6162 | |
|---|
| 6163 | !! 2. Dead leaf cover (stomate_litter.f90) |
|---|
| 6164 | CALL deadleaf (kjpindex, veget_max, dead_leaves, deadleaf_cover) |
|---|
| 6165 | |
|---|
| 6166 | END SUBROUTINE stomate_var_init |
|---|
| 6167 | |
|---|
| 6168 | |
|---|
| 6169 | !! ================================================================================================================================ |
|---|
| 6170 | !! INTERFACE : stomate_accu |
|---|
| 6171 | !! |
|---|
| 6172 | !>\BRIEF Accumulate a variable for the time period specified by |
|---|
| 6173 | !! dt_sechiba or calculate the mean value over the period of dt_stomate |
|---|
| 6174 | !! |
|---|
| 6175 | !! DESCRIPTION : Accumulate a variable for the time period specified by |
|---|
| 6176 | !! dt_sechiba or calculate the mean value over the period of dt_stomate. |
|---|
| 6177 | !! stomate_accu interface can be used for variables having 1, 2 or 3 dimensions. |
|---|
| 6178 | !! The corresponding subruoutine stomate_accu_r1d, stomate_accu_r2d or |
|---|
| 6179 | !! stomate_accu_r3d will be selected through the interface depending on the number of dimensions. |
|---|
| 6180 | !! |
|---|
| 6181 | !! RECENT CHANGE(S) : None |
|---|
| 6182 | !! |
|---|
| 6183 | !! MAIN OUTPUT VARIABLE(S): accumulated or mean variable ::field_out:: |
|---|
| 6184 | !! |
|---|
| 6185 | !! REFERENCE(S) : None |
|---|
| 6186 | !! |
|---|
| 6187 | !! FLOWCHART : None |
|---|
| 6188 | !! \n |
|---|
| 6189 | !_ ================================================================================================================================ |
|---|
| 6190 | SUBROUTINE stomate_accu_r1d (ldmean, field_in, field_out) |
|---|
| 6191 | |
|---|
| 6192 | !! 0. Variable and parameter declaration |
|---|
| 6193 | |
|---|
| 6194 | !! 0.1 Input variables |
|---|
| 6195 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 6196 | REAL(r_std),DIMENSION(:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 6197 | |
|---|
| 6198 | !! 0.2 Modified variables |
|---|
| 6199 | REAL(r_std),DIMENSION(:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 6200 | |
|---|
| 6201 | !_ ================================================================================================================================ |
|---|
| 6202 | |
|---|
| 6203 | !! 1. Accumulate field |
|---|
| 6204 | |
|---|
| 6205 | field_out(:) = field_out(:)+field_in(:)*dt_sechiba |
|---|
| 6206 | |
|---|
| 6207 | !! 2. Mean fields |
|---|
| 6208 | |
|---|
| 6209 | IF (ldmean) THEN |
|---|
| 6210 | field_out(:) = field_out(:)/dt_stomate |
|---|
| 6211 | ENDIF |
|---|
| 6212 | |
|---|
| 6213 | END SUBROUTINE stomate_accu_r1d |
|---|
| 6214 | |
|---|
| 6215 | SUBROUTINE stomate_accu_r2d (ldmean, field_in, field_out) |
|---|
| 6216 | |
|---|
| 6217 | !! 0. Variable and parameter declaration |
|---|
| 6218 | |
|---|
| 6219 | !! 0.1 Input variables |
|---|
| 6220 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 6221 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 6222 | |
|---|
| 6223 | !! 0.2 Modified variables |
|---|
| 6224 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 6225 | |
|---|
| 6226 | !_ ================================================================================================================================ |
|---|
| 6227 | |
|---|
| 6228 | !! 1. Accumulate field |
|---|
| 6229 | |
|---|
| 6230 | field_out(:,:) = field_out(:,:)+field_in(:,:)*dt_sechiba |
|---|
| 6231 | |
|---|
| 6232 | !! 2. Mean fields |
|---|
| 6233 | |
|---|
| 6234 | IF (ldmean) THEN |
|---|
| 6235 | field_out(:,:) = field_out(:,:)/dt_stomate |
|---|
| 6236 | ENDIF |
|---|
| 6237 | |
|---|
| 6238 | END SUBROUTINE stomate_accu_r2d |
|---|
| 6239 | |
|---|
| 6240 | SUBROUTINE stomate_accu_r3d (ldmean, field_in, field_out) |
|---|
| 6241 | |
|---|
| 6242 | !! 0. Variable and parameter declaration |
|---|
| 6243 | |
|---|
| 6244 | !! 0.1 Input variables |
|---|
| 6245 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 6246 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 6247 | |
|---|
| 6248 | !! 0.2 Modified variables |
|---|
| 6249 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 6250 | |
|---|
| 6251 | !_ ================================================================================================================================ |
|---|
| 6252 | |
|---|
| 6253 | !! 1. Accumulate field |
|---|
| 6254 | |
|---|
| 6255 | field_out(:,:,:) = field_out(:,:,:)+field_in(:,:,:)*dt_sechiba |
|---|
| 6256 | |
|---|
| 6257 | !! 2. Mean fields |
|---|
| 6258 | |
|---|
| 6259 | IF (ldmean) THEN |
|---|
| 6260 | field_out(:,:,:) = field_out(:,:,:)/dt_stomate |
|---|
| 6261 | ENDIF |
|---|
| 6262 | |
|---|
| 6263 | END SUBROUTINE stomate_accu_r3d |
|---|
| 6264 | |
|---|
| 6265 | |
|---|
| 6266 | SUBROUTINE stomate_accu_r4d (ldmean, field_in, field_out) |
|---|
| 6267 | |
|---|
| 6268 | !! 0. Variable and parameter declaration |
|---|
| 6269 | |
|---|
| 6270 | !! 0.1 Input variables |
|---|
| 6271 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 6272 | REAL(r_std),DIMENSION(:,:,:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 6273 | |
|---|
| 6274 | !! 0.2 Modified variables |
|---|
| 6275 | REAL(r_std),DIMENSION(:,:,:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 6276 | |
|---|
| 6277 | !_ ================================================================================================================================ |
|---|
| 6278 | |
|---|
| 6279 | !! 1. Accumulate field |
|---|
| 6280 | |
|---|
| 6281 | field_out(:,:,:,:) = field_out(:,:,:,:)+field_in(:,:,:,:)*dt_sechiba |
|---|
| 6282 | |
|---|
| 6283 | !! 2. Mean fields |
|---|
| 6284 | |
|---|
| 6285 | IF (ldmean) THEN |
|---|
| 6286 | field_out(:,:,:,:) = field_out(:,:,:,:)/dt_stomate |
|---|
| 6287 | ENDIF |
|---|
| 6288 | |
|---|
| 6289 | END SUBROUTINE stomate_accu_r4d |
|---|
| 6290 | |
|---|
| 6291 | !! ================================================================================================================================ |
|---|
| 6292 | |
|---|
| 6293 | END MODULE stomate |
|---|
