| 1 | ! ================================================================================================================================= |
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| 2 | ! MODULE : stomate |
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| 3 | ! |
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| 4 | ! CONTACT : orchidee-help _at_ ipsl.jussieu.fr |
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| 5 | ! |
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| 6 | ! LICENCE : IPSL (2006) |
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| 7 | ! This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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| 8 | ! |
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| 9 | !>\BRIEF Groups the subroutines that: (1) initialize all variables in |
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| 10 | !! stomate, (2) read and write forcing files of stomate and the soil component, |
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| 11 | !! (3) aggregates and convert variables to handle the different time steps |
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| 12 | !! between sechiba and stomate, (4) call subroutines that govern major stomate |
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| 13 | !! processes (litter,\ soil, and vegetation dynamics) and (5) structures these tasks |
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| 14 | !! in stomate_main |
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| 15 | !! |
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| 16 | !!\n DESCRIPTION : None |
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| 17 | !! |
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| 18 | !! RECENT CHANGE(S) : None |
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| 19 | !! |
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| 20 | !! REFERENCE(S) : None |
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| 21 | !! |
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| 22 | !! SVN : |
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| 23 | !! $HeadURL$ |
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| 24 | !! $Date$ |
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| 25 | !! $Revision$ |
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| 26 | !! \n |
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| 27 | !_ ================================================================================================================================ |
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| 28 | |
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| 29 | MODULE stomate |
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| 30 | |
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| 31 | ! Modules used: |
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| 32 | USE netcdf |
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| 33 | USE defprec |
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| 34 | USE grid |
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| 35 | USE constantes |
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| 36 | USE constantes_soil |
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| 37 | USE vertical_soil_var |
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| 38 | USE pft_parameters |
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| 39 | USE structures |
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| 40 | USE sapiens_forestry, ONLY : read_in_fm_map, read_in_litter_map, & |
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| 41 | read_in_species_change_map, & |
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| 42 | read_in_desired_fm_map |
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| 43 | USE stomate_io |
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| 44 | USE stomate_data |
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| 45 | USE stomate_season |
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| 46 | USE stomate_lpj |
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| 47 | USE stomate_litter |
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| 48 | USE stomate_vmax |
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| 49 | USE stomate_som_dynamics |
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| 50 | USE stomate_resp |
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| 51 | USE mod_orchidee_para |
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| 52 | USE ioipsl_para |
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| 53 | USE xios_orchidee |
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| 54 | USE function_library, ONLY : check_biomass_sync, cc_to_lai, & |
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| 55 | check_surface_area, check_mass_balance |
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| 56 | USE matrix_resolution |
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| 57 | |
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| 58 | IMPLICIT NONE |
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| 59 | |
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| 60 | ! Private & public routines |
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| 61 | |
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| 62 | PRIVATE |
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| 63 | PUBLIC stomate_main,stomate_clear,init_forcing, stomate_forcing_read, stomate_initialize, stomate_finalize, stomate_veget_update |
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| 64 | |
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| 65 | INTERFACE stomate_accu |
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| 66 | MODULE PROCEDURE stomate_accu_r1d, stomate_accu_r2d, stomate_accu_r3d, stomate_accu_r4d |
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| 67 | END INTERFACE |
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| 68 | |
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| 69 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: veget_cov_max !! Maximal fractional coverage: maximum share of a pixel |
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| 70 | !! taken by a PFT. Excluding no_bio fraction |
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| 71 | !$OMP THREADPRIVATE(veget_cov_max) |
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| 72 | |
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| 73 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: age !! Age of PFT it normalized by biomass - can increase and |
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| 74 | !! decrease - (years) |
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| 75 | !$OMP THREADPRIVATE(age) |
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| 76 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: adapted !! Winter too cold for PFT to survive (0-1, unitless) |
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| 77 | !$OMP THREADPRIVATE(adapted) |
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| 78 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: regenerate !! Winter sufficiently cold to produce viable seeds |
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| 79 | !! (0-1, unitless) |
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| 80 | !$OMP THREADPRIVATE(regenerate) |
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| 81 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: everywhere !! Is the PFT everywhere in the grid box or very localized |
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| 82 | !! (after its intoduction) |
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| 83 | !$OMP THREADPRIVATE(everywhere) |
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| 84 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fireindex !! Probability of fire (unitless) |
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| 85 | !$OMP THREADPRIVATE(fireindex) |
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| 86 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: veget_lastlight !! Vegetation fractions (on ground) after last light |
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| 87 | !! competition (unitless) |
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| 88 | !$OMP THREADPRIVATE(veget_lastlight) |
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| 89 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: fpc_max !! "maximal" coverage fraction of a grid box (LAI -> |
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| 90 | !! infinity) on ground. [??CHECK??] It's set to zero here, |
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| 91 | !! and then is used once in lpj_light.f90 to test if |
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| 92 | !! fpc_nat is greater than it. Something seems missing |
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| 93 | !$OMP THREADPRIVATE(fpc_max) |
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| 94 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: PFTpresent !! PFT exists (equivalent to veget > 0 for natural PFTs) |
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| 95 | !$OMP THREADPRIVA\TE(PFTpresent) |
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| 96 | REAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: plant_status !! Growth and phenological status of the plant |
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| 97 | !! Different stati defined in constantes |
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| 98 | !$OMP THREADPRIVATE(plant_status) |
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| 99 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: need_adjacent !! This PFT needs to be in present in an adjacent gridbox |
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| 100 | !! if it is to be introduced in a new gridbox |
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| 101 | !$OMP THREADPRIVATE(need_adjacent) |
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| 102 | !-- |
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| 103 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_daily !! Daily plant available water -root profile weighted |
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| 104 | !! (0-1, unitless) |
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| 105 | !$OMP THREADPRIVATE(humrel_daily) |
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| 106 | |
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| 107 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vir_humrel_daily !! Virtual daily plant available water -root profile weighted |
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| 108 | !! (0-1, unitless) |
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| 109 | !$OMP THREADPRIVATE(vir_humrel_daily) |
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| 110 | |
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| 111 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: stressed_daily !! Accumulated proxy for stressed ecosystem functioning |
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| 112 | !! see variable stressed defined in sechiba |
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| 113 | !$OMP THREADPRIVATE(stressed_daily) |
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| 114 | |
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| 115 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: unstressed_daily !! Accumulated proxy for unstressed ecosystem functioning |
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| 116 | !! see variable stressed defined in sechiba |
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| 117 | !$OMP THREADPRIVATE(unstressed_daily) |
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| 118 | |
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| 119 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: daylight !! Time steps dt_radia during daylight |
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| 120 | !$OMP THREADPRIVATE(daylight) |
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| 121 | |
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| 122 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: daylight_count !! Time steps dt_radia during daylight and when there is growth (gpp>0) |
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| 123 | !$OMP THREADPRIVATE(daylight_count) |
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| 124 | |
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| 125 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: transpir_supply_daily !! Daily supply of water for transpiration @tex $(mm dt^{-1})$ @endtex |
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| 126 | ! $OMP THREADPRIVATE(transpir_supply_daily) |
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| 127 | |
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| 128 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vir_transpir_supply_daily !! Daily supply of water for transpiration |
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| 129 | !! @tex $(mm dt^{-1})$ @endtex |
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| 130 | ! $OMP THREADPRIVATE(vir_transpir_supply_daily) |
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| 131 | |
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| 132 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: transpir_daily !! Daily demand of water for transpiration @tex $(mm dt^{-1})$ @endtex |
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| 133 | ! $OMP THREADPRIVATE(transpir_daily) |
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| 134 | |
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| 135 | |
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| 136 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_week !! "Weekly" plant available water -root profile weighted |
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| 137 | !! (0-1, unitless) |
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| 138 | !$OMP THREADPRIVATE(humrel_week) |
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| 139 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_month !! "Monthly" plant available water -root profile weighted |
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| 140 | !! (0-1, unitless) |
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| 141 | !$OMP THREADPRIVATE(humrel_month) |
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| 142 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_growingseason !! Mean growing season moisture availability (used for |
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| 143 | !! allocation response) |
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| 144 | !$OMP THREADPRIVATE(humrel_growingseason) |
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| 145 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: vir_humrel_growingseason !! Mean growing season moisture availability (used for |
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| 146 | !! allocation response) |
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| 147 | !$OMP THREADPRIVATE(vir_humrel_growingseason) |
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| 148 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxhumrel_lastyear !! Last year's max plant available water -root profile |
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| 149 | !! weighted (0-1, unitless) |
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| 150 | !$OMP THREADPRIVATE(maxhumrel_lastyear) |
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| 151 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxhumrel_thisyear !! This year's max plant available water -root profile |
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| 152 | !! weighted (0-1, unitless) |
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| 153 | !$OMP THREADPRIVATE(maxhumrel_thisyear) |
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| 154 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minhumrel_lastyear !! Last year's min plant available water -root profile |
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| 155 | !! weighted (0-1, unitless) |
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| 156 | !$OMP THREADPRIVATE(minhumrel_lastyear) |
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| 157 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minhumrel_thisyear !! This year's minimum plant available water -root profile |
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| 158 | !! weighted (0-1, unitless) |
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| 159 | !$OMP THREADPRIVATE(minhumrel_thisyear) |
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| 160 | !--- |
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| 161 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_daily !! Daily air temperature at 2 meter (K) |
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| 162 | !$OMP THREADPRIVATE(t2m_daily) |
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| 163 | |
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| 164 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason !! "seasonal" 2 meter temperatures (K) |
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| 165 | !$OMP THREADPRIVATE(Tseason) |
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| 166 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_length !! temporary variable to calculate Tseason |
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| 167 | !$OMP THREADPRIVATE(Tseason_length) |
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| 168 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_tmp !! temporary variable to calculate Tseason |
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| 169 | !$OMP THREADPRIVATE(Tseason_tmp) |
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| 170 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: Tmin_spring_time |
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| 171 | !$OMP THREADPRIVATE(Tmin_spring_time) |
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| 172 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: onset_date !! Date in the year at when the leaves started to grow(begin_leaves), only for diagnostics. |
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| 173 | !$OMP THREADPRIVATE(onset_date) |
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| 174 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_week !! Mean "weekly" (default 7 days) air temperature at 2 |
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| 175 | !! meter (K) |
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| 176 | !$OMP THREADPRIVATE(t2m_week) |
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| 177 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_month !! Mean "monthly" (default 20 days) air temperature at 2 |
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| 178 | !! meter (K) |
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| 179 | !$OMP THREADPRIVATE(t2m_month) |
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| 180 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_longterm !! Mean "Long term" (default 3 years) air temperature at |
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| 181 | !! 2 meter (K) |
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| 182 | !$OMP THREADPRIVATE(t2m_longterm) |
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| 183 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_min_daily !! Daily minimum air temperature at 2 meter (K) |
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| 184 | !$OMP THREADPRIVATE(t2m_min_daily) |
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| 185 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: tsurf_daily !! Daily surface temperatures (K) |
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| 186 | !$OMP THREADPRIVATE(tsurf_daily) |
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| 187 | |
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| 188 | !--- |
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| 189 | ! variables added for windthrow module --- |
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| 190 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: wind_speed_daily !! Daily maximum wind speed at 2 meter (ms-1) |
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| 191 | !$OMP THREADPRIVATE(wind_speed_daily) |
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| 192 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: wind_max_daily !! Temporary daily maximum speed used to calculate wind_speed_daily (ms-1) |
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| 193 | !$OMP THREADPRIVATE(wind_max_daily) |
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| 194 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: soil_temp_daily !! Daily maximum soil temperature at 0.8 meter below ground(K) |
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| 195 | !$OMP THREADPRIVATE(soil_temp_daily) |
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| 196 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: soil_max_daily !! Temporary daily maximum soil temperature used to calculate soil_temp_speed_daily (ms-1) |
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| 197 | !$OMP THREADPRIVATE(soil_max_daily) |
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| 198 | !--- |
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| 199 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_daily !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex |
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| 200 | !$OMP THREADPRIVATE(precip_daily) |
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| 201 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_lastyear !! Last year's annual precipitation sum |
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| 202 | !! @tex $??(mm year^{-1})$ @endtex |
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| 203 | !$OMP THREADPRIVATE(precip_lastyear) |
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| 204 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_thisyear !! This year's annual precipitation sum |
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| 205 | !! @tex $??(mm year^{-1})$ @endtex |
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| 206 | !$OMP THREADPRIVATE(precip_thisyear) |
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| 207 | !--- |
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| 208 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: soilhum_daily !! Daily soil humidity (0-1, unitless) |
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| 209 | !$OMP THREADPRIVATE(soilhum_daily) |
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| 210 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: soilhum_month !! Soil humidity - integrated over a month (0-1, unitless) |
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| 211 | !$OMP THREADPRIVATE(soilhum_month) |
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| 212 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_daily !! Daily soil temperatures (K) |
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| 213 | !$OMP THREADPRIVATE(tsoil_daily) |
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| 214 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_month !! Soil temperatures at each soil layer integrated over a |
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| 215 | !! month (K) |
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| 216 | !$OMP THREADPRIVATE(tsoil_month) |
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| 217 | !--- |
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| 218 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: litterhum_daily !! Daily litter humidity (0-1, unitless) |
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| 219 | !$OMP THREADPRIVATE(litterhum_daily) |
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| 220 | !--- |
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| 221 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_moist !! Moisture control of heterotrophic respiration |
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| 222 | !! (0-1, unitless) |
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| 223 | !$OMP THREADPRIVATE(control_moist) |
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| 224 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: drainage !! Fraction of water lost from the soil column by leaching (-) |
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| 225 | !$OMP THREADPRIVATE(drainage) |
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| 226 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: drainage_daily !! Daily Fraction of water lost from the soil column by leaching (-) |
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| 227 | !$OMP THREADPRIVATE(drainage_daily) |
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| 228 | REAL(r_std),ALLOCATABLE,SAVE, DIMENSION(:,:) :: n_mineralisation_d !! net nitrogen mineralisation of decomposing SOM !! (gN/m**2/day), supposed to be NH4 |
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| 229 | !$OMP THREADPRIVATE(n_mineralisation_d) |
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| 230 | REAL(r_std),ALLOCATABLE,SAVE, DIMENSION(:,:,:) :: plant_n_uptake_daily !! Uptake of soil N by plants |
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| 231 | !! (gN/m**2/day) |
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| 232 | !$OMP THREADPRIVATE(plant_n_uptake_daily) |
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| 233 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_temp !! Temperature control of heterotrophic respiration at the |
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| 234 | !! different soil levels (0-1, unitless) |
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| 235 | !$OMP THREADPRIVATE(control_temp) |
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| 236 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: control_moist_daily !! Moisture control of heterotrophic respiration daily |
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| 237 | !! (0-1, unitless) |
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| 238 | !$OMP THREADPRIVATE(control_moist_daily) |
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| 239 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: control_temp_daily !! Temperature control of heterotrophic respiration, above |
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| 240 | !! and below daily (0-1, unitless) |
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| 241 | !$OMP THREADPRIVATE(control_temp_daily) |
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| 242 | !--- |
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| 243 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_init_date !! inital date for gdd count |
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| 244 | !$OMP THREADPRIVATE(gdd_init_date) |
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| 245 | |
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| 246 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_from_growthinit !! gdd from beginning of season (C) |
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| 247 | !$OMP THREADPRIVATE(gdd_from_growthinit) |
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| 248 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_lastyear !! Last year's annual Growing Degree Days, |
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| 249 | !! threshold 0 deg C (K) |
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| 250 | !$OMP THREADPRIVATE(gdd0_lastyear) |
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| 251 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_thisyear !! This year's annual Growing Degree Days, |
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| 252 | !! threshold 0 deg C (K) |
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| 253 | !$OMP THREADPRIVATE(gdd0_thisyear) |
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| 254 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_m5_dormance !! Growing degree days for onset of growing season, |
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| 255 | !! threshold -5 deg C (K) |
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| 256 | !$OMP THREADPRIVATE(gdd_m5_dormance) |
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| 257 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_midwinter !! Growing degree days for onset of growing season, |
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| 258 | !! since midwinter (K) |
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| 259 | !$OMP THREADPRIVATE(gdd_midwinter) |
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| 260 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ncd_dormance !! Number of chilling days since leaves were lost (days) |
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| 261 | !$OMP THREADPRIVATE(ncd_dormance) |
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| 262 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ngd_minus5 !! Number of growing days, threshold -5 deg C (days) |
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| 263 | !$OMP THREADPRIVATE(ngd_minus5) |
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| 264 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: hum_min_dormance !! Minimum moisture during dormance (0-1, unitless) |
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| 265 | !$OMP THREADPRIVATE(hum_min_dormance) |
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| 266 | !--- |
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| 267 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_daily !! Daily gross primary productivity per ground area |
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| 268 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 269 | !$OMP THREADPRIVATE(gpp_daily) |
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| 270 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_week !! Mean "weekly" (default 7 days) GPP |
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| 271 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 272 | !$OMP THREADPRIVATE(gpp_week) |
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| 273 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_lastyear !! Last year's maximum "weekly" GPP |
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| 274 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 275 | !$OMP THREADPRIVATE(maxgppweek_lastyear) |
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| 276 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_thisyear !! This year's maximum "weekly" GPP |
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| 277 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 278 | !$OMP THREADPRIVATE(maxgppweek_thisyear) |
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| 279 | !--- |
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| 280 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_daily !! Daily net primary productivity per ground area |
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| 281 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 282 | !$OMP THREADPRIVATE(npp_daily) |
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| 283 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_longterm !! "Long term" (default 3 years) net primary productivity |
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| 284 | !! per ground area |
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| 285 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 286 | !$OMP THREADPRIVATE(npp_longterm) |
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| 287 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_equil !! Equilibrium NPP written to forcesoil |
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| 288 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 289 | !$OMP THREADPRIVATE(npp_equil) |
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| 290 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: npp_tot !! Total NPP written to forcesoil |
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| 291 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 292 | !$OMP THREADPRIVATE(npp_tot) |
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| 293 | !--- |
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| 294 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part_radia!! Maintenance respiration of different plant parts per |
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| 295 | !! total ground area at Sechiba time step |
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| 296 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 297 | !$OMP THREADPRIVATE(resp_maint_part_radia) |
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| 298 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part !! Maintenance respiration of different plant parts per |
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| 299 | !! total ground area at Stomate time step |
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| 300 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 301 | !$OMP THREADPRIVATE(resp_maint_part) |
|---|
| 302 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_radia !! Maintenance respiration per ground area at Sechiba time |
|---|
| 303 | !! step |
|---|
| 304 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 305 | !$OMP THREADPRIVATE(resp_maint_radia) |
|---|
| 306 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_d !! Maintenance respiration per ground area at Stomate time |
|---|
| 307 | !! step |
|---|
| 308 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 309 | !$OMP THREADPRIVATE(resp_maint_d) |
|---|
| 310 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_growth_d !! Growth respiration per ground area |
|---|
| 311 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 312 | !$OMP THREADPRIVATE(resp_growth_d) |
|---|
| 313 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_d !! Heterotrophic respiration per ground area |
|---|
| 314 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 315 | !$OMP THREADPRIVATE(resp_hetero_d) |
|---|
| 316 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_radia !! Heterothrophic respiration per ground area at Sechiba |
|---|
| 317 | !! time step |
|---|
| 318 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 319 | !$OMP THREADPRIVATE(resp_hetero_radia) |
|---|
| 320 | !--- |
|---|
| 321 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: turnover_time !! Turnover time of grasses |
|---|
| 322 | !! @tex $(dt_stomate^{-1})$ @endtex |
|---|
| 323 | !$OMP THREADPRIVATE(turnover_time) |
|---|
| 324 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_daily !! Senescence-driven turnover (better: mortality) of |
|---|
| 325 | !! leaves and roots |
|---|
| 326 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 327 | !$OMP THREADPRIVATE(turnover_daily) |
|---|
| 328 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_littercalc !! Senescence-driven turnover (better: mortality) of |
|---|
| 329 | !! leaves and roots at Sechiba time step |
|---|
| 330 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 331 | !$OMP THREADPRIVATE(turnover_littercalc) |
|---|
| 332 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_longterm !! "Long term" (default 3 years) senescence-driven |
|---|
| 333 | !! turnover (better: mortality) of leaves and roots |
|---|
| 334 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 335 | !$OMP THREADPRIVATE(turnover_longterm) |
|---|
| 336 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_litter !! Background (not senescence-driven) mortality of biomass |
|---|
| 337 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 338 | !$OMP THREADPRIVATE(bm_to_litter) |
|---|
| 339 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_littercalc !! conversion of biomass to litter per ground area at |
|---|
| 340 | !! Sechiba time step |
|---|
| 341 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 342 | !$OMP THREADPRIVATE(bm_to_littercalc) |
|---|
| 343 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: dead_leaves !! Metabolic and structural pools of dead leaves on ground |
|---|
| 344 | !! per PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 345 | !$OMP THREADPRIVATE(dead_leaves) |
|---|
| 346 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:):: litter !! Above and below ground metabolic and structural litter |
|---|
| 347 | !! per ground area |
|---|
| 348 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 349 | !$OMP THREADPRIVATE(litter) |
|---|
| 350 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: firelitter !! Total litter above the ground that could potentially |
|---|
| 351 | !! burn @tex $(gC m^{-2})$ @endtex |
|---|
| 352 | !$OMP THREADPRIVATE(firelitter) |
|---|
| 353 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: carbon_input !! Quantity of carbon going into carbon pools from litter |
|---|
| 354 | !! decomposition per ground area at Sechiba time step |
|---|
| 355 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 356 | !$OMP THREADPRIVATE(carbon_input) |
|---|
| 357 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: nitrogen_input !! Quantity of nitrogen going into nitrogen pools from litter |
|---|
| 358 | !! decomposition per ground area at Sechiba time step |
|---|
| 359 | !! @tex $(gC m^{-2} dtradia^{-1})$ @endtex |
|---|
| 360 | !$OMP THREADPRIVATE(nitrogen_input) |
|---|
| 361 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: som_input_daily !! Daily quantity of carbon going into carbon pools from |
|---|
| 362 | !! litter decomposition per ground area |
|---|
| 363 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 364 | !$OMP THREADPRIVATE(som_input_daily) |
|---|
| 365 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: som !! Soil organic matter pools per ground area: active, slow, or |
|---|
| 366 | !! passive, @tex $(gC or N m^{-2})$ @endtex |
|---|
| 367 | !$OMP THREADPRIVATE(som) |
|---|
| 368 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: lignin_struc !! Ratio Lignine/Carbon in structural litter for above and |
|---|
| 369 | !! below ground compartments (unitless) |
|---|
| 370 | !$OMP THREADPRIVATE(lignin_struc) |
|---|
| 371 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: lignin_wood !! Ratio Lignine/Carbon in woody litter for above and |
|---|
| 372 | !! below ground compartments (unitless) |
|---|
| 373 | !$OMP THREADPRIVATE(lignin_wood) |
|---|
| 374 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_lastyearmax !! Last year's maximum leaf mass per ground area for each |
|---|
| 375 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 376 | !$OMP THREADPRIVATE(lm_lastyearmax) |
|---|
| 377 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_thisyearmax !! This year's maximum leaf mass per ground area for each |
|---|
| 378 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 379 | !$OMP THREADPRIVATE(lm_thisyearmax) |
|---|
| 380 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_lastyear !! Last year's maximum fpc for each natural PFT, on ground |
|---|
| 381 | !! [??CHECK] fpc but this ones look ok (computed in |
|---|
| 382 | !! season, used in light)?? |
|---|
| 383 | !$OMP THREADPRIVATE(maxfpc_lastyear) |
|---|
| 384 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_thisyear !! This year's maximum fpc for each PFT, on ground (see |
|---|
| 385 | !! stomate_season), [??CHECK] fpc but this ones look ok |
|---|
| 386 | !! (computed in season, used in light)?? |
|---|
| 387 | !$OMP THREADPRIVATE(maxfpc_thisyear) |
|---|
| 388 | !--- |
|---|
| 389 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_age !! Age of different leaf classes (days) |
|---|
| 390 | !$OMP THREADPRIVATE(leaf_age) |
|---|
| 391 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_frac !! PFT fraction of leaf mass in leaf age class (0-1, |
|---|
| 392 | !! unitless) |
|---|
| 393 | !$OMP THREADPRIVATE(leaf_frac) |
|---|
| 394 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: when_growthinit !! Days since beginning of growing season (days) |
|---|
| 395 | !$OMP THREADPRIVATE(when_growthinit) |
|---|
| 396 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: herbivores !! Time constant of probability of a leaf to be eaten by a |
|---|
| 397 | !! herbivore (days) |
|---|
| 398 | !$OMP THREADPRIVATE(herbivores) |
|---|
| 399 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: RIP_time !! How much time ago was the PFT eliminated for the last |
|---|
| 400 | !! time (year) |
|---|
| 401 | !$OMP THREADPRIVATE(RIP_time) |
|---|
| 402 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: time_hum_min !! Time elapsed since strongest moisture limitation (days) |
|---|
| 403 | !$OMP THREADPRIVATE(time_hum_min) |
|---|
| 404 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: drain_daily !! daily fraction of water lost from the soil column by leaching (-) |
|---|
| 405 | !$OMP THREADPRIVATE(drain_daily) |
|---|
| 406 | |
|---|
| 407 | !--- |
|---|
| 408 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: clay_fm !! Soil clay content (0-1, unitless), parallel computing |
|---|
| 409 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: clay_fm_g !! Soil clay content (0-1, unitless), parallel computing |
|---|
| 410 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: silt_fm !! Soil silt content (0-1, unitless), parallel computing |
|---|
| 411 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: silt_fm_g !! Soil silt content (0-1, unitless), parallel computing |
|---|
| 412 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: bulk_fm !! Bulk density (kg/m**3), parallel computing |
|---|
| 413 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: bulk_fm_g !! Bulk density (kg/m**3), parallel computing |
|---|
| 414 | |
|---|
| 415 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: precip_fm !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex, |
|---|
| 416 | !! parallel computing |
|---|
| 417 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: precip_fm_g !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex, |
|---|
| 418 | !! parallel computing |
|---|
| 419 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: litterhum_daily_fm !! Daily relative humidity of litter (0-1, unitless), |
|---|
| 420 | !! parallel computing |
|---|
| 421 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: litterhum_daily_fm_g !! Daily relative humidity of litter (0-1, unitless), |
|---|
| 422 | !! parallel computing |
|---|
| 423 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_daily_fm !! Daily air temperature at 2 meter (K), parallel |
|---|
| 424 | !! computing |
|---|
| 425 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_daily_fm_g !! Daily air temperature at 2 meter (K), parallel |
|---|
| 426 | !! computing |
|---|
| 427 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_min_daily_fm !! Daily minimum air temperature at 2 meter (K), |
|---|
| 428 | !! parallel computing |
|---|
| 429 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_min_daily_fm_g !! Daily minimum air temperature at 2 meter (K), |
|---|
| 430 | !! parallel computing |
|---|
| 431 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: tsurf_daily_fm !! Daily surface temperatures (K), parallel |
|---|
| 432 | !! computing |
|---|
| 433 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: tsurf_daily_fm_g !! Daily surface temperatures (K), parallel |
|---|
| 434 | !! computing |
|---|
| 435 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: tsoil_daily_fm !! Daily soil temperatures (K), parallel computing |
|---|
| 436 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: tsoil_daily_fm_g !! Daily soil temperatures (K), parallel computing |
|---|
| 437 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: soilhum_daily_fm !! Daily soil humidity (0-1, unitless), parallel computing |
|---|
| 438 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: soilhum_daily_fm_g !! Daily soil humidity (0-1, unitless), parallel computing |
|---|
| 439 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: humrel_daily_fm !! Daily relative humidity of atmosphere (0-1, unitless), |
|---|
| 440 | !! parallel computing |
|---|
| 441 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: humrel_daily_fm_g !! Daily relative humidity of atmosphere (0-1, unitless), |
|---|
| 442 | !! parallel computing |
|---|
| 443 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: gpp_daily_fm !! Daily gross primary productivity per ground area |
|---|
| 444 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex, |
|---|
| 445 | !! parallel computing |
|---|
| 446 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: gpp_daily_fm_g !! Daily gross primary productivity per ground area |
|---|
| 447 | !! @tex $(gC m^{-2} day^{-1})$ @endtex, |
|---|
| 448 | !! parallel computing |
|---|
| 449 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_fm !! Vegetation coverage taking into account non-biological |
|---|
| 450 | !! coverage (unitless), parallel computing |
|---|
| 451 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_fm_g !! Vegetation coverage taking into account non-biological |
|---|
| 452 | !! coverage (unitless), parallel computing |
|---|
| 453 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_max_fm !! Maximum vegetation coverage taking into account |
|---|
| 454 | !! non-biological coverage (unitless), parallel computing |
|---|
| 455 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_max_fm_g !! Maximum vegetation coverage taking into account none |
|---|
| 456 | !! biological coverage (unitless), parallel computing |
|---|
| 457 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: lai_fm !! Leaf area index @tex $@tex $(m^2 m^{-2})$ @endtex$ @endtex, |
|---|
| 458 | !! parallel computing |
|---|
| 459 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: lai_fm_g !! Leaf area index @tex $@tex $(m^2 m^{-2})$ @endtex$ @endtex, |
|---|
| 460 | !! parallel computing |
|---|
| 461 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: drainage_fm !! daily fraction of water lost from the soil column by leaching (-) |
|---|
| 462 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: drainage_fm_g !! drain |
|---|
| 463 | !! parallel computing |
|---|
| 464 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: cn_leaf_min_season !! Seasonal min CN ratio of leaves |
|---|
| 465 | !$OMP THREADPRIVATE(cn_leaf_min_season) |
|---|
| 466 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: nstress_season !! N-related seasonal stress (used for allocation) |
|---|
| 467 | !$OMP THREADPRIVATE(nstress_season) |
|---|
| 468 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: soil_n_min !! mineral nitrogen in the soil (gN/m**2) |
|---|
| 469 | !! (first index=kjpindex, second index=nvm, third index=nnspec) |
|---|
| 470 | !$OMP THREADPRIVATE(soil_n_min) |
|---|
| 471 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: p_O2 !! partial pressure of oxigen in the soil (hPa)(first index=kjpindex, second index=nvm) |
|---|
| 472 | !$OMP THREADPRIVATE(p_O2) |
|---|
| 473 | |
|---|
| 474 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: bact !! denitrifier biomass (gC/m**2) |
|---|
| 475 | !! (first index=kjpindex, second index=nvm) |
|---|
| 476 | !$OMP THREADPRIVATE(bact) |
|---|
| 477 | |
|---|
| 478 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_fire !! Carbon emitted to the atmosphere by burning living |
|---|
| 479 | !! and dead biomass |
|---|
| 480 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 481 | !$OMP THREADPRIVATE(co2_fire) |
|---|
| 482 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_to_bm_dgvm !! Psuedo-photosynthesis,C used to provide seedlings with |
|---|
| 483 | !!$ !! an initial biomass, arbitrarily removed from the |
|---|
| 484 | !!$ !! atmosphere |
|---|
| 485 | !!$ !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 486 | !!$!$OMP THREADPRIVATE(co2_to_bm_dgvm) |
|---|
| 487 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: n_to_bm !! N taken from ?? to provide seedlings with |
|---|
| 488 | !!$ !! an initial N biomass |
|---|
| 489 | !!$ !! @tex $(gN m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 490 | !!$!$OMP THREADPRIVATE(n_to_bm) |
|---|
| 491 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: atm_to_bm !! C and N taken from the atmosphere to provide seedlings |
|---|
| 492 | !! with an initial N biomass |
|---|
| 493 | !! @tex $(gN m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 494 | !$OMP THREADPRIVATE(atm_to_bm) |
|---|
| 495 | |
|---|
| 496 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_flux_daily !! Daily net CO2 flux between atmosphere and biosphere |
|---|
| 497 | !!$ !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 498 | !!$ !! [??CHECK] sign convention? |
|---|
| 499 | !!$!$OMP THREADPRIVATE(co2_flux_daily) |
|---|
| 500 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_flux_monthly !! Monthly net CO2 flux between atmosphere and biosphere |
|---|
| 501 | !!$ !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 502 | !!$ !! [??CHECK] sign convention? |
|---|
| 503 | !!$!$OMP THREADPRIVATE(co2_flux_monthly) |
|---|
| 504 | |
|---|
| 505 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: prod_s !! Wood products remaining in the 1 year-turnover pool |
|---|
| 506 | !! after the annual release for each compartment |
|---|
| 507 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 508 | !! (0:1 input from year of land cover change), |
|---|
| 509 | !! dimension(#pixels,0:1 years |
|---|
| 510 | !$OMP THREADPRIVATE(prod_s) |
|---|
| 511 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: prod_m !! Wood products remaining in the 10 year-turnover pool |
|---|
| 512 | !! after the annual release for each compartment |
|---|
| 513 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 514 | !! (0:10 input from year of land cover change), |
|---|
| 515 | !! dimension(#pixels,0:10 years |
|---|
| 516 | !$OMP THREADPRIVATE(prod_m) |
|---|
| 517 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: prod_l !! Wood products remaining in the 100 year-turnover pool |
|---|
| 518 | !! after the annual release for each compartment |
|---|
| 519 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 520 | !! (0:100 input from year of land cover change), |
|---|
| 521 | !! dimension(#pixels,0:100 years) |
|---|
| 522 | !$OMP THREADPRIVATE(prod_l) |
|---|
| 523 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: flux_s !! Wood decomposition from the 1 year-turnover pool |
|---|
| 524 | !! compartments |
|---|
| 525 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 526 | !! dimension(#pixels,0:1) |
|---|
| 527 | !$OMP THREADPRIVATE(flux_s) |
|---|
| 528 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: flux_m !! Wood decomposition from the 10 year-turnover pool |
|---|
| 529 | !! compartments |
|---|
| 530 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 531 | !! dimension(#pixels,0:10) |
|---|
| 532 | !$OMP THREADPRIVATE(flux_m) |
|---|
| 533 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: flux_l !! Wood decomposition from the 100 year-turnover pool |
|---|
| 534 | !! compartments |
|---|
| 535 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 536 | !! dimension(#pixels,0:100) |
|---|
| 537 | !$OMP THREADPRIVATE(flux_l) |
|---|
| 538 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux_prod_s !! Release during first year following land cover change |
|---|
| 539 | !! (paper, burned, etc...) |
|---|
| 540 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 541 | !$OMP THREADPRIVATE(flux_prod_s) |
|---|
| 542 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux_prod_m !! Total annual release from the 10 year-turnover pool |
|---|
| 543 | !! sum of flux_m |
|---|
| 544 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 545 | !$OMP THREADPRIVATE(flux_prod_m) |
|---|
| 546 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux_prod_l !! Total annual release from the 100 year-turnover pool |
|---|
| 547 | !! sum of flux_l |
|---|
| 548 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 549 | !$OMP THREADPRIVATE(flux_prod_l) |
|---|
| 550 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: carb_mass_total !! Total on-site and off-site C pool |
|---|
| 551 | !! @tex $(??gC m^{-2})$ @endtex |
|---|
| 552 | !$OMP THREADPRIVATE(carb_mass_total) |
|---|
| 553 | !--- |
|---|
| 554 | REAL(r_std), SAVE :: tau_longterm |
|---|
| 555 | !$OMP THREADPRIVATE(tau_longterm) |
|---|
| 556 | REAL(r_std),SAVE :: dt_days=zero !! Time step of STOMATE (days) |
|---|
| 557 | !$OMP THREADPRIVATE(dt_days) |
|---|
| 558 | INTEGER(i_std),SAVE :: date=0 !! Date (days) |
|---|
| 559 | !$OMP THREADPRIVATE(date) |
|---|
| 560 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: nforce !! Number of states calculated for the soil forcing |
|---|
| 561 | !! variables (unitless), dimension(::nparan*::nbyear) both |
|---|
| 562 | !! given in the run definition file |
|---|
| 563 | !$OMP THREADPRIVATE(nforce) |
|---|
| 564 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: isf !! Index for number of time steps that can be stored in |
|---|
| 565 | !! memory (unitless), dimension (#nsfm) |
|---|
| 566 | !$OMP THREADPRIVATE(isf) |
|---|
| 567 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: nf_cumul !! Number of years over which the average is calculated in |
|---|
| 568 | !! forcesoil when cumul flag is set, dimension (#nsft) |
|---|
| 569 | !! [??CHECK] definition the dimension is number of |
|---|
| 570 | !! timesteps in a year? |
|---|
| 571 | !$OMP THREADPRIVATE(nf_cumul) |
|---|
| 572 | INTEGER(i_std), SAVE :: spinup_period !! Period of years used to calculate the resolution of the system for spinup analytic. |
|---|
| 573 | !! This period correspond in most cases to the period of years of forcing data used |
|---|
| 574 | INTEGER,PARAMETER :: r_typ = nf90_real4 !! Specify data format (server dependent) |
|---|
| 575 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:) :: nf_written !! Flag indicating whether the forcing data have been |
|---|
| 576 | !! written |
|---|
| 577 | !$OMP THREADPRIVATE(nf_written) |
|---|
| 578 | !--- |
|---|
| 579 | LOGICAL, SAVE :: do_slow=.FALSE. !! Flag that determines whether stomate_accu calculates |
|---|
| 580 | !! the sum(do_slow=.FALSE.) or the mean |
|---|
| 581 | !! (do_slow=.TRUE.) |
|---|
| 582 | !$OMP THREADPRIVATE(do_slow) |
|---|
| 583 | LOGICAL, SAVE :: EndOfYear=.FALSE. !! Update annual variables? This variable must be |
|---|
| 584 | !! .TRUE. once a year |
|---|
| 585 | !$OMP THREADPRIVATE(EndOfYear) |
|---|
| 586 | LOGICAL, SAVE :: EndOfMonth=.FALSE. !! Update monthly variables? This variable must be |
|---|
| 587 | !!.TRUE. once a month |
|---|
| 588 | !$OMP THREADPRIVATE(EndOfMonth) |
|---|
| 589 | LOGICAL, SAVE :: l_first_stomate = .TRUE.!! Is this the first call of stomate? |
|---|
| 590 | !$OMP THREADPRIVATE(l_first_stomate) |
|---|
| 591 | LOGICAL, SAVE :: cumul_forcing=.FALSE.!! flag for cumul of forcing if teststomate |
|---|
| 592 | !$OMP THREADPRIVATE(cumul_forcing) |
|---|
| 593 | LOGICAL, SAVE :: cumul_Cforcing=.FALSE. !! Flag, if internal parameter cumul_Cforcing is |
|---|
| 594 | !! TRUE then ::nbyear (defined in run definition |
|---|
| 595 | !! file will be forced to 1 later in this module. If |
|---|
| 596 | !! FALSE the mean over ::nbyear is written in forcesoil |
|---|
| 597 | !$OMP THREADPRIVATE(cumul_Cforcing) |
|---|
| 598 | !--- |
|---|
| 599 | |
|---|
| 600 | REAL(r_std),DIMENSION(:),ALLOCATABLE,SAVE :: circ_class_dist !! When the circumference class distribution |
|---|
| 601 | !! is redone due to empty classes, this is the |
|---|
| 602 | !! tree distribution used. Notice that this distribution |
|---|
| 603 | !! is normalized after being read in. |
|---|
| 604 | !$OMP THREADPRIVATE(circ_class_dist) |
|---|
| 605 | REAL(r_std),DIMENSION(:,:,:),ALLOCATABLE,SAVE :: store_sum_delta_ba!! Sum of increase of basal area (m^2) which does not pass |
|---|
| 606 | !! through gap clean |
|---|
| 607 | !$OMP THREADPRIVATE(store_sum_delta_ba) |
|---|
| 608 | REAL(r_std),DIMENSION(:),ALLOCATABLE,SAVE :: st_dist !! During self-thinning, we need to decide which |
|---|
| 609 | !! circumference classes to kill trees in. This |
|---|
| 610 | !! is the distribution that tells us this. Notice that |
|---|
| 611 | !! it is normalized after being read in. |
|---|
| 612 | !$OMP THREADPRIVATE(st_dist) |
|---|
| 613 | |
|---|
| 614 | !!$ !+++CHECK+++ |
|---|
| 615 | !!$ ! replaced by harvest_xxx. Seems like post processing for xios |
|---|
| 616 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: harvest_above_monthly !! [??CHECK] post-processing - should be removed? |
|---|
| 617 | !!$!$OMP THREADPRIVATE(harvest_above_monthly) |
|---|
| 618 | !!$ !+++++++++++ |
|---|
| 619 | !!$ |
|---|
| 620 | !!$ REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: flux_prod_monthly !! [??CHECK] post-processing - should be removed? |
|---|
| 621 | !!$!$OMP THREADPRIVATE(flux_prod_monthly) |
|---|
| 622 | !--- |
|---|
| 623 | INTEGER(i_std), SAVE :: global_years !! Global counter of years (year) |
|---|
| 624 | !$OMP THREADPRIVATE(global_years) |
|---|
| 625 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: ok_equilibrium !! Logical array marking the points where the resolution is ok |
|---|
| 626 | !! (true/false) |
|---|
| 627 | !$OMP THREADPRIVATE(ok_equilibrium) |
|---|
| 628 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: carbon_eq !! Logical array to mark the carbon pools at equilibrium ? |
|---|
| 629 | !! If true, the job stops. (true/false) |
|---|
| 630 | !$OMP THREADPRIVATE(carbon_eq) |
|---|
| 631 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: nbp_accu !! Accumulated Net Biospheric Production over the year (gC.m^2 ) |
|---|
| 632 | !$OMP THREADPRIVATE(nbp_accu) |
|---|
| 633 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: nbp_accu_pool !! Accumulated pool-basaed Net Biospheric Production over the year (gC.m^2 ) |
|---|
| 634 | !$OMP THREADPRIVATE(nbp_accu_pool) |
|---|
| 635 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: nbp_flux !! Net Biospheric Production (gC.m^2.day^{-1}) |
|---|
| 636 | !$OMP THREADPRIVATE(nbp_flux) |
|---|
| 637 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: nbp_pool !! Pool-based Net Biospheric Production (gC.m^2.day^{-1}) |
|---|
| 638 | !$OMP THREADPRIVATE(nbp_pool) |
|---|
| 639 | REAL(r_std), ALLOCATABLE, SAVe,DIMENSION(:,:) :: nbp_pool_start !! Biomass pool as calculated from the |
|---|
| 640 | !! previous time step |
|---|
| 641 | !$OMP THREADPRIVATE(nbp_pool_start) |
|---|
| 642 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: nbp_pool_end !! Biomass pool calculated at the end |
|---|
| 643 | !! current time step |
|---|
| 644 | !$OMP THREADPRIVATE(nbp_pool_end) |
|---|
| 645 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:,:) :: matrixA !! matrix containing the fluxes between the carbon pools |
|---|
| 646 | !! per sechiba time step |
|---|
| 647 | !! @tex $(gC.m^2.day^{-1})$ @endtex |
|---|
| 648 | !$OMP THREADPRIVATE(matrixA) |
|---|
| 649 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:) :: vectorB !! vector containing the litter increase per sechiba time step |
|---|
| 650 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 651 | !$OMP THREADPRIVATE(vectorB) |
|---|
| 652 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: matrixV !! matrix containing the accumulated values of matrixA |
|---|
| 653 | !$OMP THREADPRIVATE(matrixV) |
|---|
| 654 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: vectorU !! matrix containing the accumulated values of vectorB |
|---|
| 655 | !$OMP THREADPRIVATE(vectorU) |
|---|
| 656 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: matrixW !! matrix containing the opposite of matrixA |
|---|
| 657 | !$OMP THREADPRIVATE(matrixW) |
|---|
| 658 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: previous_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 659 | !! method in the previous resolution |
|---|
| 660 | !$OMP THREADPRIVATE(previous_stock) |
|---|
| 661 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: current_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 662 | !! method in the current resolution |
|---|
| 663 | !$OMP THREADPRIVATE(current_stock) |
|---|
| 664 | REAL(r_std), SAVE :: eps_carbon !! Stopping criterion for carbon pools (unitless,0-1) |
|---|
| 665 | !$OMP THREADPRIVATE(eps_carbon) |
|---|
| 666 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:) :: sigma !! Threshold for indivudal tree growth (m, trees whose |
|---|
| 667 | !! circumference is smaller than sigma don't grow much) |
|---|
| 668 | !$OMP THREADPRIVATE(sigma) |
|---|
| 669 | |
|---|
| 670 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: age_stand !! Age of stand (years) |
|---|
| 671 | !$OMP THREADPRIVATE(age_stand) |
|---|
| 672 | |
|---|
| 673 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: rotation_n !! Rotation number (number of rotation since pft is managed) |
|---|
| 674 | !$OMP THREADPRIVATE(rotation_n) |
|---|
| 675 | |
|---|
| 676 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: last_cut !! Years since last thinning (years) |
|---|
| 677 | !$OMP THREADPRIVATE(last_cut) |
|---|
| 678 | |
|---|
| 679 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: CN_som_litter_longterm !! Longterm CN ratio of litter and som pools (gC/gN) |
|---|
| 680 | |
|---|
| 681 | REAL(r_std), SAVE :: tau_CN_longterm !! Counter used for calculating the longterm CN ratio of SOM and litter pools (seconds) |
|---|
| 682 | |
|---|
| 683 | ! Functional Allocation |
|---|
| 684 | |
|---|
| 685 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: KF !! Scaling factor to convert sapwood mass |
|---|
| 686 | !! into leaf mass (m). The initial value is calculated |
|---|
| 687 | !! in prescribe and updated during allocation |
|---|
| 688 | !$OMP THREADPRIVATE(KF) |
|---|
| 689 | |
|---|
| 690 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: k_latosa_adapt !! Leaf to sapwood area adapted for waterstress. |
|---|
| 691 | !! Adaptation takes place at the end of the year |
|---|
| 692 | !! (m) |
|---|
| 693 | !$OMP THREADPRIVATE(k_latosa_adapt) |
|---|
| 694 | |
|---|
| 695 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: harvest_pool !! The pool which records the quantity of |
|---|
| 696 | !! wood harvested and thinned due to forest |
|---|
| 697 | !! management and LCC. |
|---|
| 698 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 699 | !$OMP THREADPRIVATE(harvest_pool) |
|---|
| 700 | |
|---|
| 701 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_type !! Type of management that resulted |
|---|
| 702 | !! in the harvest (unitless) |
|---|
| 703 | !$OMP THREADPRIVATE(harvest_type) |
|---|
| 704 | |
|---|
| 705 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_cut !! Type of cutting that was used for the harvest |
|---|
| 706 | !! (unitless) |
|---|
| 707 | !$OMP THREADPRIVATE(harvest_cut) |
|---|
| 708 | |
|---|
| 709 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: harvest_area !! Harvested area (m^{2}) |
|---|
| 710 | !$OMP THREADPRIVATE(harvest_area) |
|---|
| 711 | |
|---|
| 712 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: harvest_5y_area !!Total harvested area in the last 5 years (m^{2}) |
|---|
| 713 | !$OMP THREADPRIVATE(harvest_5y_area) |
|---|
| 714 | |
|---|
| 715 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: harvest_pool_bound !! The boundaries of the diameter classes |
|---|
| 716 | !! in the wood harvest pools |
|---|
| 717 | !! @tex $(m)$ @endtex |
|---|
| 718 | !$OMP THREADPRIVATE(harvest_pool_bound) |
|---|
| 719 | |
|---|
| 720 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: mai !! The mean annual increment used in |
|---|
| 721 | !! forestry. It is the average change |
|---|
| 722 | !! in the wood volume of of the trunk |
|---|
| 723 | !! over the lifetime of the forest. |
|---|
| 724 | !! @tex $(m**3 / m**2 / year)$ @endtex |
|---|
| 725 | !$OMP THREADPRIVATE(mai) |
|---|
| 726 | |
|---|
| 727 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: pai !! The period annual increment used in |
|---|
| 728 | !! forestry. It is the average change |
|---|
| 729 | !! in the wood volume of of the trunk |
|---|
| 730 | !! over the past n_pai years of the forest, |
|---|
| 731 | !! where n_pai is defined in constants.f90. |
|---|
| 732 | !! @tex $(m**3 / m**2 / year)$ @endtex |
|---|
| 733 | !$OMP THREADPRIVATE(pai) |
|---|
| 734 | |
|---|
| 735 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: previous_wood_volume !! The volume of the tree trunks |
|---|
| 736 | !! in a stand for the previous year. |
|---|
| 737 | !! @tex $(m**3 / m**2 )$ @endtex |
|---|
| 738 | !$OMP THREADPRIVATE(previous_wood_volume) |
|---|
| 739 | |
|---|
| 740 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: mai_count !! The number of times we've |
|---|
| 741 | !! calculated the volume increment |
|---|
| 742 | !! for a stand |
|---|
| 743 | !$OMP THREADPRIVATE(mai_count) |
|---|
| 744 | |
|---|
| 745 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: coppice_dens !! The density of a coppice at the first |
|---|
| 746 | !! cutting. |
|---|
| 747 | !! @tex $( 1 / m**2 )$ @endtex |
|---|
| 748 | !$OMP THREADPRIVATE(coppice_dens) |
|---|
| 749 | |
|---|
| 750 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: rue_longterm !! Longterm radiation use efficiency (??units??) |
|---|
| 751 | !$OMP THREADPRIVATE(rue_longterm) |
|---|
| 752 | |
|---|
| 753 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: lab_fac !! Activity of labile pool factor (??units??) |
|---|
| 754 | |
|---|
| 755 | REAL(r_std),SAVE :: dt_forcesoil !! Time step of soil forcing file (days) |
|---|
| 756 | !$OMP THREADPRIVATE(dt_forcesoil) |
|---|
| 757 | INTEGER(i_std),PARAMETER :: nparanmax=366 !! Maximum number of time steps per year for forcesoil |
|---|
| 758 | INTEGER(i_std),SAVE :: nparan !! Number of time steps per year for forcesoil read from run definition (unitless) |
|---|
| 759 | !$OMP THREADPRIVATE(nparan) |
|---|
| 760 | INTEGER(i_std),SAVE :: nbyear=1 !! Number of years saved for forcesoil (unitless) |
|---|
| 761 | !$OMP THREADPRIVATE(nbyear) |
|---|
| 762 | INTEGER(i_std),SAVE :: iatt !! Time step of forcing of soil processes (iatt = 1 to ::nparan*::nbyear) |
|---|
| 763 | !$OMP THREADPRIVATE(iatt) |
|---|
| 764 | INTEGER(i_std),SAVE :: iatt_old=1 !! Previous ::iatt |
|---|
| 765 | !$OMP THREADPRIVATE(iatt_old) |
|---|
| 766 | INTEGER(i_std),SAVE :: nsfm !! Number of time steps that can be stored in memory (unitless) |
|---|
| 767 | !$OMP THREADPRIVATE(nsfm) |
|---|
| 768 | INTEGER(i_std),SAVE :: nsft !! Number of time steps in a year (unitless) |
|---|
| 769 | !$OMP THREADPRIVATE(nsft) |
|---|
| 770 | INTEGER(i_std),SAVE :: iisf !! Current pointer for teststomate (unitless) |
|---|
| 771 | !$OMP THREADPRIVATE(iisf) |
|---|
| 772 | CHARACTER(LEN=100), SAVE :: forcing_name !! Name of forcing file 1 |
|---|
| 773 | !$OMP THREADPRIVATE(forcing_name) |
|---|
| 774 | CHARACTER(LEN=100), SAVE :: Cforcing_name !! Name of forcing file 2 |
|---|
| 775 | !$OMP THREADPRIVATE(Cforcing_name) |
|---|
| 776 | INTEGER(i_std),SAVE :: Cforcing_id !! File identifer of file 2 |
|---|
| 777 | !$OMP THREADPRIVATE(Cforcing_id) |
|---|
| 778 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions (unitless) |
|---|
| 779 | |
|---|
| 780 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: forest_managed !! forest management flag (is the forest being managed?) |
|---|
| 781 | !! (0-4,unitless) |
|---|
| 782 | !$OMP THREADPRIVATE(forest_managed) |
|---|
| 783 | |
|---|
| 784 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: forest_managed_lastyear !! forest management flag for the previous year |
|---|
| 785 | !! (0-4,unitless) |
|---|
| 786 | !$OMP THREADPRIVATE(forest_managed_lastyear) |
|---|
| 787 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: species_change_map !! A map which gives the PFT number that each |
|---|
| 788 | !! PFT will be replanted as in case of a clearcut. |
|---|
| 789 | !! (1-nvm,unitless) |
|---|
| 790 | !$OMP THREADPRIVATE(species_change_map) |
|---|
| 791 | INTEGER(i_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: fm_change_map !! A map which gives the desired FM strategy when |
|---|
| 792 | !! the PFT will be replanted after a clearcut. |
|---|
| 793 | !! (1-nvm,unitless) |
|---|
| 794 | !$OMP THREADPRIVATE(fm_change_map) |
|---|
| 795 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:,:) :: lpft_replant !! Indicates if this PFT has either died this year |
|---|
| 796 | !! or been clearcut/coppiced. If it has, it is not |
|---|
| 797 | !! replanted until the end of the year. |
|---|
| 798 | !$OMP THREADPRIVATE(lpft_replant) |
|---|
| 799 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: litter_demand !! The amount of litter which will |
|---|
| 800 | !! be moved from forest to crop pools |
|---|
| 801 | !! at the end of the year. |
|---|
| 802 | !! @tex $( gC / year )$ @endtex |
|---|
| 803 | !$OMP THREADPRIVATE(litter_demand) |
|---|
| 804 | |
|---|
| 805 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: wstress_season !! Water stress factor, based on hum_rel_daily |
|---|
| 806 | !! (unitless, 0-1) |
|---|
| 807 | !$OMP THREADPRIVATE(wstress_season) |
|---|
| 808 | |
|---|
| 809 | REAL(r_std), ALLOCATABLE, SAVE,DIMENSION(:,:) :: wstress_month !! Water stress factor, based on hum_rel_daily |
|---|
| 810 | !! (unitless, 0-1) |
|---|
| 811 | !$OMP THREADPRIVATE(wstress_month) |
|---|
| 812 | |
|---|
| 813 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: light_tran_to_level_season !! Mean seasonal fraction of light transmitted |
|---|
| 814 | !! to canopy levels |
|---|
| 815 | !$OMP THREADPRIVATE(light_tran_to_level_season) |
|---|
| 816 | |
|---|
| 817 | |
|---|
| 818 | PUBLIC clay_fm, silt_fm, bulk_fm, humrel_daily_fm, litterhum_daily_fm, t2m_daily_fm, & |
|---|
| 819 | & t2m_min_daily_fm, tsurf_daily_fm, tsoil_daily_fm, soilhum_daily_fm, & |
|---|
| 820 | & precip_fm, gpp_daily_fm, veget_fm, veget_max_fm, lai_fm |
|---|
| 821 | PUBLIC dt_days, date, do_slow, EndOfYear |
|---|
| 822 | PUBLIC isf, nf_written |
|---|
| 823 | |
|---|
| 824 | CONTAINS |
|---|
| 825 | |
|---|
| 826 | |
|---|
| 827 | !! ================================================================================================================================ |
|---|
| 828 | !! SUBROUTINE : stomate_initialize |
|---|
| 829 | !! |
|---|
| 830 | !>\BRIEF Initialization routine for stomate module. |
|---|
| 831 | !! |
|---|
| 832 | !! DESCRIPTION : Initialization routine for stomate module. Read options from parameter file, allocate variables, read variables |
|---|
| 833 | !! from restart file and initialize variables if necessary. |
|---|
| 834 | !! |
|---|
| 835 | !! \n |
|---|
| 836 | !_ ================================================================================================================================ |
|---|
| 837 | |
|---|
| 838 | SUBROUTINE stomate_initialize & |
|---|
| 839 | (kjit, kjpij, kjpindex, & |
|---|
| 840 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 841 | index, lalo, neighbours, resolution, & |
|---|
| 842 | contfrac, totfrac_nobio, clay, silt, & |
|---|
| 843 | bulk, t2m, & |
|---|
| 844 | veget, veget_max, & |
|---|
| 845 | co2_flux, fco2_lu, deadleaf_cover, assim_param, & |
|---|
| 846 | circ_class_biomass, circ_class_n,& |
|---|
| 847 | lai_per_level, laieff_fit) |
|---|
| 848 | |
|---|
| 849 | IMPLICIT NONE |
|---|
| 850 | !! 0. Variable and parameter declaration |
|---|
| 851 | !! 0.1 Input variables |
|---|
| 852 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 853 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 854 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 855 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 856 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 857 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier(unitless) |
|---|
| 858 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! The indices of the terrestrial pixels only (unitless) |
|---|
| 859 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) for pixels (degrees) |
|---|
| 860 | INTEGER(i_std),DIMENSION(kjpindex,8),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM (unitless) |
|---|
| 861 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of the gridbox |
|---|
| 862 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 863 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio !! Fraction of grid cell covered by lakes, land ice, cities, ... (unitless) |
|---|
| 864 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 865 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 866 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 867 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: t2m !! 2 m air temperature (K) |
|---|
| 868 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 869 | !! non-biological fraction (unitless) |
|---|
| 870 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 871 | !! non-biological fraction (unitless) |
|---|
| 872 | |
|---|
| 873 | !! 0.2 Output variables |
|---|
| 874 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_flux !! CO2 flux between atmosphere and biosphere |
|---|
| 875 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: fco2_lu !! CO2 flux between atmosphere and biosphere from land-use (without forest management) |
|---|
| 876 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: deadleaf_cover !! Fraction of soil covered by dead leaves (unitless) |
|---|
| 877 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(out) :: assim_param !! min+max+opt temperatures (K) & vmax for photosynthesis |
|---|
| 878 | |
|---|
| 879 | !! 0.3 Modified variables |
|---|
| 880 | REAL(r_std),DIMENSION(:,:,:,:,:),INTENT(inout) :: circ_class_biomass!! Biomass per circumference class @tex $(gC tree^{-1})$ @endtex |
|---|
| 881 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: circ_class_n !! Number of trees within each circumference |
|---|
| 882 | REAL(r_std), DIMENSION(:,:,:), INTENT(inout) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 883 | !! @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 884 | TYPE(laieff_type),DIMENSION (:,:,:),INTENT(inout) & |
|---|
| 885 | :: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 886 | |
|---|
| 887 | !! 0.4 Local variables |
|---|
| 888 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 889 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 890 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 891 | REAL(r_std),DIMENSION(kjpindex,nvm) :: rprof !! Coefficient of the exponential functions that |
|---|
| 892 | !! relates root density to soil depth (unitless) |
|---|
| 893 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 894 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 895 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 896 | !! covered by a PFT (fraction of ground area covered), |
|---|
| 897 | !! taking into account LAI |
|---|
| 898 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 899 | |
|---|
| 900 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 901 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 902 | !! time step on one processor (Mb) |
|---|
| 903 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 904 | !! time step on all processors(Mb) |
|---|
| 905 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 906 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 907 | INTEGER(i_std) :: direct !! |
|---|
| 908 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! |
|---|
| 909 | LOGICAL :: l_error !! error flag |
|---|
| 910 | REAL(r_std) :: temp_total !! Used for renormalizing |
|---|
| 911 | INTEGER(i_std),ALLOCATABLE, DIMENSION(:,:) :: fm_map_temp !! A temporary variable to hold the forest |
|---|
| 912 | !! management map which is read in from a file |
|---|
| 913 | !! (0-4,unitless) |
|---|
| 914 | INTEGER(i_std), ALLOCATABLE, DIMENSION(:,:) :: species_map_temp !! A temporary variable to hold the species |
|---|
| 915 | !! change map which is read in from a file |
|---|
| 916 | !! (1-nvm,unitless) |
|---|
| 917 | INTEGER(i_std) :: forest_managed_temp !! Temporary variable to affect forest_managed(1,6) |
|---|
| 918 | !================================================================================================================================ |
|---|
| 919 | |
|---|
| 920 | !! 1. Initialize variable |
|---|
| 921 | |
|---|
| 922 | ! Initialize local printlev |
|---|
| 923 | !printlev_loc=get_printlev('stomate') |
|---|
| 924 | |
|---|
| 925 | !! Update flag |
|---|
| 926 | l_first_stomate = .FALSE. |
|---|
| 927 | |
|---|
| 928 | !! 1.1 Store current time step in a common variable |
|---|
| 929 | itime = kjit |
|---|
| 930 | |
|---|
| 931 | !![DISPENSABLE] 1.2 Copy the depth of the different soil layers from diaglev specified in slow_proc |
|---|
| 932 | |
|---|
| 933 | !! 1.3 PFT rooting depth across pixels, humescte is pre-defined |
|---|
| 934 | ! (constantes_veg.f90). It is defined as the coefficient of an exponential |
|---|
| 935 | ! function relating root density to depth |
|---|
| 936 | DO j=1,nvm |
|---|
| 937 | rprof(:,j) = 1./humcste(j) |
|---|
| 938 | ENDDO |
|---|
| 939 | |
|---|
| 940 | !!$ !! 1.3.1 Set lai |
|---|
| 941 | !!$ lai(:,ibare_sechiba) = zero |
|---|
| 942 | !!$ DO i = 1, kjpindex |
|---|
| 943 | !!$ DO j = 2,nvm |
|---|
| 944 | !!$ lai(i,j) = cc_to_lai(circ_class_biomass(i,j,:,ileaf,icarbon),circ_class_n(i,j,:),j) |
|---|
| 945 | !!$ ENDDO |
|---|
| 946 | !!$ ENDDO |
|---|
| 947 | |
|---|
| 948 | !! 1.4.0 Parameters for spinup |
|---|
| 949 | ! |
|---|
| 950 | eps_carbon = 0.01 |
|---|
| 951 | !Config Key = EPS_CARBON |
|---|
| 952 | !Config Desc = Allowed error on carbon stock |
|---|
| 953 | !Config If = SPINUP_ANALYTIC |
|---|
| 954 | !Config Def = 0.01 |
|---|
| 955 | !Config Help = |
|---|
| 956 | !Config Units = [%] |
|---|
| 957 | CALL getin_p('EPS_CARBON',eps_carbon) |
|---|
| 958 | |
|---|
| 959 | |
|---|
| 960 | !Config Key = SPINUP_PERIOD |
|---|
| 961 | !Config Desc = Period to calulcate equilibrium during spinup analytic |
|---|
| 962 | !Config If = SPINUP_ANALYTIC |
|---|
| 963 | !Config Def = -1 |
|---|
| 964 | !Config Help = Period corresponds in most cases to the number of years of forcing data used in the spinup. |
|---|
| 965 | !Config Units = [years] |
|---|
| 966 | spinup_period = -1 |
|---|
| 967 | CALL getin_p('SPINUP_PERIOD',spinup_period) |
|---|
| 968 | |
|---|
| 969 | ! Check spinup_period values. |
|---|
| 970 | ! For periods uptil 6 years, to obtain equilibrium, a bigger period have to be used |
|---|
| 971 | ! and therefore spinup_period is adjusted to 10 years. |
|---|
| 972 | IF (spinup_analytic) THEN |
|---|
| 973 | IF (spinup_period <= 0) THEN |
|---|
| 974 | WRITE(numout,*) 'Error in parameter spinup_period. This parameter must be > 0 : spinup_period=',spinup_period |
|---|
| 975 | CALL ipslerr_p (3,'stomate_initialize', & |
|---|
| 976 | 'Parameter spinup_period must be set to a positive integer.', & |
|---|
| 977 | 'Set this parameter to the number of years of forcing data used for the spinup.', & |
|---|
| 978 | '') |
|---|
| 979 | ELSE IF (spinup_period <= 6) THEN |
|---|
| 980 | ! Adjust to bigger period. The period must be a multiple of the original period. |
|---|
| 981 | WRITE(numout,*) 'Initial spinup_period =',spinup_period,' will be adjusted.' |
|---|
| 982 | spinup_period = spinup_period*(INT(9/spinup_period)+1) |
|---|
| 983 | END IF |
|---|
| 984 | WRITE(numout,*) 'Spinup analytic is activated using eps_carbon=',eps_carbon, ' and spinup_period=',spinup_period |
|---|
| 985 | END IF |
|---|
| 986 | |
|---|
| 987 | !! 1.4.0 Initialization of PFT specific parameters |
|---|
| 988 | ! Initialization of PFT specific parameters that have no value |
|---|
| 989 | ! for the bare soil PFT i.e. fire resistance, flamability, maximum lai, |
|---|
| 990 | ! settings for growing degree days (GDD), settings for senescence, |
|---|
| 991 | ! respiration coefficients, photosynthesis, etc. |
|---|
| 992 | ! [DISPENSABLE] |
|---|
| 993 | |
|---|
| 994 | !! 1.4.1 Allocate memory for all variables in stomate |
|---|
| 995 | ! Allocate memory for all variables in stomate, build new index |
|---|
| 996 | ! tables accounting for the PFTs, read and check flags and set file |
|---|
| 997 | ! identifier for restart and history files. |
|---|
| 998 | CALL stomate_init (kjpij, kjpindex, index, lalo, & |
|---|
| 999 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 1000 | |
|---|
| 1001 | !! 1.4.2 Initialization of PFT specific parameters |
|---|
| 1002 | ! Initialization of PFT specific parameters i.e. sla from leaf life, |
|---|
| 1003 | ! sapling characteristics (biomass), migration speed, critical diameter, |
|---|
| 1004 | ! coldest tolerable temperature, critical values for phenology, maximum |
|---|
| 1005 | ! life time of leaves, respiration coefficients and photosynthesis. |
|---|
| 1006 | ! The subroutine also communicates settings read by stomate_constant_init. |
|---|
| 1007 | CALL data (kjpindex, lalo) |
|---|
| 1008 | |
|---|
| 1009 | !! 1.4.3 Initial conditions |
|---|
| 1010 | |
|---|
| 1011 | !! 1.4.3.1 Read initial values for STOMATE's variables from |
|---|
| 1012 | ! the _restart_ file ??Shouldn't this be included in stomate_init?? |
|---|
| 1013 | ! Looks like an initialization! |
|---|
| 1014 | co2_flux(:,:) = zero |
|---|
| 1015 | fco2_lu(:) = zero |
|---|
| 1016 | |
|---|
| 1017 | !! 1.4.3.2 Read the management status |
|---|
| 1018 | ! This is the first call in this loop, It should just |
|---|
| 1019 | ! be initialised. |
|---|
| 1020 | forest_managed_lastyear(:,:) = 0 |
|---|
| 1021 | |
|---|
| 1022 | !Config Key = FOREST_MANAGED |
|---|
| 1023 | !Config Desc = Forest management flag |
|---|
| 1024 | !Config If = OK_STOMATE |
|---|
| 1025 | !Config Def = 1: unmanaged, 2: high stand, 3: coppice, |
|---|
| 1026 | ! 4: short rotation coppice |
|---|
| 1027 | !Config Help = |
|---|
| 1028 | !Config Units = [-] |
|---|
| 1029 | ! forest management is always activated but a setting |
|---|
| 1030 | ! of ifm_none means don't do any human management. |
|---|
| 1031 | forest_managed(:,:) = ifm_none |
|---|
| 1032 | ! We need to things this was, instead of passing the whole array, |
|---|
| 1033 | ! since the domains of different processers will sometimes have |
|---|
| 1034 | ! different sizes, and calling MPI_BCAST with arrays of different |
|---|
| 1035 | ! sizes causes an error. So we just read a single integer, BCAST |
|---|
| 1036 | ! that, and then change the arrays here. |
|---|
| 1037 | CALL getin_p('FOREST_MANAGED_FORCED',forest_managed_temp) |
|---|
| 1038 | IF(forest_managed_temp .NE. ifm_none)THEN |
|---|
| 1039 | forest_managed(:,:)=forest_managed_temp |
|---|
| 1040 | ENDIF |
|---|
| 1041 | |
|---|
| 1042 | ! We need to have the option to read the forest management |
|---|
| 1043 | ! strategy from a map (NetCDF file). If this option is |
|---|
| 1044 | ! equal to Y, we will overwrite the forest_managed_forced |
|---|
| 1045 | ! option above, so you should be careful to only use one |
|---|
| 1046 | ! or the other. |
|---|
| 1047 | ! If we prescribe a species change we will also overwrite |
|---|
| 1048 | ! forest_managed so we don't want to read it from a file |
|---|
| 1049 | ! but we want to use the restart values |
|---|
| 1050 | IF(ok_read_fm_map)THEN |
|---|
| 1051 | |
|---|
| 1052 | ! If we are using age classes, we read in the map in the same |
|---|
| 1053 | ! way but then we change it a bit to account for age classes. |
|---|
| 1054 | l_error = .FALSE. |
|---|
| 1055 | ALLOCATE(fm_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1056 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1057 | IF (l_error) THEN |
|---|
| 1058 | WRITE(numout,*) 'Problem with memory allocation: ' ,& |
|---|
| 1059 | 'temporary FM map ',kjpindex,nvmap |
|---|
| 1060 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1061 | 'Problem with memory allocation','','') |
|---|
| 1062 | ENDIF |
|---|
| 1063 | |
|---|
| 1064 | CALL read_in_fm_map(kjpindex, lalo, neighbours, resolution, & |
|---|
| 1065 | contfrac, fm_map_temp) |
|---|
| 1066 | IF(nagec .GT. 1)THEN |
|---|
| 1067 | ! All age classes of the same PFT will have the same |
|---|
| 1068 | ! management |
|---|
| 1069 | DO jv = 1,nvm |
|---|
| 1070 | forest_managed(:,jv)=fm_map_temp(:,agec_group(jv)) |
|---|
| 1071 | ENDDO |
|---|
| 1072 | |
|---|
| 1073 | ELSE |
|---|
| 1074 | forest_managed(:,:)=fm_map_temp(:,:) |
|---|
| 1075 | |
|---|
| 1076 | ENDIF |
|---|
| 1077 | |
|---|
| 1078 | DEALLOCATE(fm_map_temp) |
|---|
| 1079 | |
|---|
| 1080 | ENDIF |
|---|
| 1081 | |
|---|
| 1082 | ! Get values from _restart_ file. Note that only ::kjpindex, ::index, ::lalo |
|---|
| 1083 | ! and ::resolution are input variables, all others are output variables. |
|---|
| 1084 | CALL readstart & |
|---|
| 1085 | (kjpindex, index, lalo, resolution, t2m, & |
|---|
| 1086 | dt_days_read, date, & |
|---|
| 1087 | adapted, regenerate, & |
|---|
| 1088 | humrel_daily, gdd_init_date, litterhum_daily, & |
|---|
| 1089 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 1090 | soilhum_daily, precip_daily, & |
|---|
| 1091 | gpp_daily, npp_daily, turnover_daily, & |
|---|
| 1092 | humrel_month, humrel_week, humrel_growingseason,& |
|---|
| 1093 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 1094 | tsoil_month, soilhum_month, fireindex, firelitter, & |
|---|
| 1095 | maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 1096 | minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 1097 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 1098 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 1099 | precip_lastyear, precip_thisyear, & |
|---|
| 1100 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, & |
|---|
| 1101 | ncd_dormance, ngd_minus5, & |
|---|
| 1102 | PFTpresent, npp_longterm, lm_lastyearmax, lm_thisyearmax, & |
|---|
| 1103 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 1104 | turnover_longterm, gpp_week, resp_maint_part, & |
|---|
| 1105 | leaf_age, leaf_frac, plant_status, when_growthinit, age, & |
|---|
| 1106 | resp_hetero_d, resp_maint_d, resp_growth_d, co2_fire, atm_to_bm, & |
|---|
| 1107 | veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 1108 | time_hum_min, hum_min_dormance, & |
|---|
| 1109 | litter, dead_leaves, & |
|---|
| 1110 | som, lignin_struc, lignin_wood, turnover_time,& |
|---|
| 1111 | prod_s, prod_m, prod_l, flux_s, flux_m, flux_l, & |
|---|
| 1112 | flux_prod_s, flux_prod_m, flux_prod_l, & |
|---|
| 1113 | bm_to_litter, carb_mass_total, & |
|---|
| 1114 | Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 1115 | Tmin_spring_time, onset_date, & |
|---|
| 1116 | global_years, ok_equilibrium, nbp_accu, nbp_flux, & |
|---|
| 1117 | nbp_accu_pool, nbp_pool, nbp_pool_start, & |
|---|
| 1118 | matrixV, vectorU, previous_stock, current_stock, & |
|---|
| 1119 | assim_param, CN_som_litter_longterm, & |
|---|
| 1120 | tau_CN_longterm, KF, k_latosa_adapt, & |
|---|
| 1121 | rue_longterm, cn_leaf_min_season, nstress_season, & |
|---|
| 1122 | soil_n_min, p_O2, bact, & |
|---|
| 1123 | circ_class_biomass, circ_class_n, store_sum_delta_ba, & |
|---|
| 1124 | forest_managed, forest_managed_lastyear, & |
|---|
| 1125 | species_change_map, fm_change_map, lpft_replant, lai_per_level, & |
|---|
| 1126 | laieff_fit, wstress_season, wstress_month, & |
|---|
| 1127 | age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 1128 | previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 1129 | light_tran_to_level_season,veget_max, harvest_5y_area) |
|---|
| 1130 | |
|---|
| 1131 | !! 1.4.3.4 Read litter raking map |
|---|
| 1132 | ! If we are doing litter raking, we need a map which |
|---|
| 1133 | ! tells us how much litter is required at every pixel. |
|---|
| 1134 | ! This number is independent of the PFTs. |
|---|
| 1135 | IF(ok_litter_raking)THEN |
|---|
| 1136 | |
|---|
| 1137 | CALL read_in_litter_map(kjpindex, lalo, neighbours, resolution, & |
|---|
| 1138 | contfrac, litter_demand) |
|---|
| 1139 | |
|---|
| 1140 | ENDIF |
|---|
| 1141 | |
|---|
| 1142 | |
|---|
| 1143 | !! 1.4.3.5 Read species with which to replant |
|---|
| 1144 | ! If we are doing species change, we need to read in the map or force |
|---|
| 1145 | ! the PFT values. We do this after the restart because otherwise our |
|---|
| 1146 | ! values are overwritten. When we implement the species change we |
|---|
| 1147 | ! usually want to change FM as well (and sometime we even need it, i.e., |
|---|
| 1148 | ! when the current FM strategy is to coppice and we change the species |
|---|
| 1149 | ! to a conifer tree than we will need to change FM because conifers are |
|---|
| 1150 | ! typically not coppiced). Species change and FM change were implemented |
|---|
| 1151 | ! separatly because that was easier to test and debug but not all |
|---|
| 1152 | ! combinations were tested. The recommended setting is read de FM_desired |
|---|
| 1153 | ! map when using species change. |
|---|
| 1154 | IF(ok_change_species)THEN |
|---|
| 1155 | |
|---|
| 1156 | IF(printlev_loc>=4) WRITE(numout,*) 'Use the species change code' |
|---|
| 1157 | |
|---|
| 1158 | ! Read species change map |
|---|
| 1159 | IF(ok_read_species_change_map)THEN |
|---|
| 1160 | |
|---|
| 1161 | WRITE(numout,*) 'Reading species change map' |
|---|
| 1162 | |
|---|
| 1163 | ! Allocate |
|---|
| 1164 | l_error = .FALSE. |
|---|
| 1165 | ALLOCATE(species_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1166 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1167 | IF (l_error) THEN |
|---|
| 1168 | WRITE(numout,*) 'Problem with memory allocation: ', & |
|---|
| 1169 | kjpindex,nvmap |
|---|
| 1170 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1171 | 'Problem with memory allocation',& |
|---|
| 1172 | 'temporary species change map','') |
|---|
| 1173 | ENDIF |
|---|
| 1174 | |
|---|
| 1175 | CALL read_in_species_change_map(kjpindex, lalo, neighbours, & |
|---|
| 1176 | resolution, contfrac, species_map_temp) |
|---|
| 1177 | |
|---|
| 1178 | ! If we are using age classes, we read in the map in the same |
|---|
| 1179 | ! way but then we change it a bit to account for age classes. |
|---|
| 1180 | IF(nagec .GT. 1)THEN |
|---|
| 1181 | |
|---|
| 1182 | ! All age classes of the same PFT will have the same |
|---|
| 1183 | ! management |
|---|
| 1184 | DO jv = 1,nvm |
|---|
| 1185 | species_change_map(:,jv)=species_map_temp(:,agec_group(jv)) |
|---|
| 1186 | ENDDO |
|---|
| 1187 | |
|---|
| 1188 | ELSE |
|---|
| 1189 | |
|---|
| 1190 | ! The number of pfts on the map is identical |
|---|
| 1191 | ! to the number of PFTs used in the simulation |
|---|
| 1192 | WRITE(numout,*) 'Reading single value for species change' |
|---|
| 1193 | species_change_map(:,:)=species_map_temp(:,:) |
|---|
| 1194 | |
|---|
| 1195 | ENDIF |
|---|
| 1196 | |
|---|
| 1197 | DEALLOCATE(species_map_temp) |
|---|
| 1198 | |
|---|
| 1199 | ELSE |
|---|
| 1200 | |
|---|
| 1201 | IF(printlev_loc>=4) WRITE(numout,*) 'Species change map NOT read' |
|---|
| 1202 | IF(printlev_loc>=4) WRITE(numout,*) 'species_change_force, ', & |
|---|
| 1203 | species_change_force |
|---|
| 1204 | IF (species_change_force .EQ. -9999) THEN |
|---|
| 1205 | |
|---|
| 1206 | ! If we end-up here the user has set-up the model |
|---|
| 1207 | ! such that we use the species_change code but only |
|---|
| 1208 | ! to change the management. To keep the code simple |
|---|
| 1209 | ! we will use a dummy species_change_map |
|---|
| 1210 | IF(printlev_loc>=4) WRITE(numout,*) 'Use veget_cov_max instead' |
|---|
| 1211 | |
|---|
| 1212 | ! All age classes of the same PFT will have the same |
|---|
| 1213 | ! management |
|---|
| 1214 | DO jv = 1,nvm |
|---|
| 1215 | species_change_map(:,jv) = agec_group(jv) |
|---|
| 1216 | ENDDO |
|---|
| 1217 | |
|---|
| 1218 | ELSE |
|---|
| 1219 | |
|---|
| 1220 | ! Use a single value (::species_change_force) instead |
|---|
| 1221 | ! of the information from a map. This was implemented |
|---|
| 1222 | ! as a feature for testing and/or debugging. It allows |
|---|
| 1223 | ! to test on a single pixel without reading maps. |
|---|
| 1224 | IF(printlev_loc>=4) WRITE(numout,*) 'Use ::species_change_force' |
|---|
| 1225 | species_change_map(:,:)=species_change_force |
|---|
| 1226 | |
|---|
| 1227 | ENDIF |
|---|
| 1228 | |
|---|
| 1229 | ENDIF |
|---|
| 1230 | |
|---|
| 1231 | ! If we apply a species change we will also prescribe a new |
|---|
| 1232 | ! management strategy but we need to decide whether we will |
|---|
| 1233 | ! read the desired management from a map or use a single |
|---|
| 1234 | ! prescribed value instead |
|---|
| 1235 | |
|---|
| 1236 | ! Read species change map |
|---|
| 1237 | IF(ok_read_desired_fm_map)THEN |
|---|
| 1238 | |
|---|
| 1239 | WRITE(numout,*) 'Reading desired FM map' |
|---|
| 1240 | ! Allocate |
|---|
| 1241 | l_error = .FALSE. |
|---|
| 1242 | ALLOCATE(fm_map_temp(kjpindex,nvmap),stat=ier) |
|---|
| 1243 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1244 | IF (l_error) THEN |
|---|
| 1245 | WRITE(numout,*) 'Problem with memory allocation: ', & |
|---|
| 1246 | kjpindex,nvmap |
|---|
| 1247 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1248 | 'Problem with memory allocation',& |
|---|
| 1249 | 'temporary fm change map','') |
|---|
| 1250 | ENDIF |
|---|
| 1251 | |
|---|
| 1252 | ! If we are using age classes, we read in the map in the same |
|---|
| 1253 | ! way but then we change it a bit to account for age classes. |
|---|
| 1254 | CALL read_in_desired_fm_map(kjpindex, lalo, neighbours, & |
|---|
| 1255 | resolution, contfrac, fm_map_temp) |
|---|
| 1256 | |
|---|
| 1257 | IF(nagec .GT. 1)THEN |
|---|
| 1258 | |
|---|
| 1259 | ! All age classes of the same PFT will have the same |
|---|
| 1260 | ! management |
|---|
| 1261 | DO jv = 1,nvm |
|---|
| 1262 | fm_change_map(:,jv)=fm_map_temp(:,agec_group(jv)) |
|---|
| 1263 | ENDDO |
|---|
| 1264 | |
|---|
| 1265 | ELSE |
|---|
| 1266 | |
|---|
| 1267 | ! The number of pfts on the map is identical |
|---|
| 1268 | ! to the number of PFTs used in the simulation |
|---|
| 1269 | fm_change_map(:,:)=fm_map_temp(:,:) |
|---|
| 1270 | |
|---|
| 1271 | ENDIF |
|---|
| 1272 | |
|---|
| 1273 | DEALLOCATE(fm_map_temp) |
|---|
| 1274 | |
|---|
| 1275 | ELSE |
|---|
| 1276 | |
|---|
| 1277 | IF(printlev_loc>=4) WRITE(numout,*) 'fm change map NOT read' |
|---|
| 1278 | IF(printlev_loc>=4) WRITE(numout,*) 'fm_change_force, ',fm_change_force |
|---|
| 1279 | IF(fm_change_force .EQ. -9999) THEN |
|---|
| 1280 | |
|---|
| 1281 | ! If we end-up here the user has set-up the model |
|---|
| 1282 | ! such that we use the species_change code but only |
|---|
| 1283 | ! to change the species while keeping the management |
|---|
| 1284 | ! constant. To keep the code simple we will use a |
|---|
| 1285 | ! dummy fm_change_map |
|---|
| 1286 | IF(printlev_loc>=4) WRITE(numout,*) 'Use forest_managed instead' |
|---|
| 1287 | fm_change_map(:,:)=forest_managed(:,:) |
|---|
| 1288 | |
|---|
| 1289 | ELSE |
|---|
| 1290 | |
|---|
| 1291 | ! Use a single value (::species_change_force) instead |
|---|
| 1292 | ! of the information from a map. This was implemented |
|---|
| 1293 | ! as a feature for testing and/or debugging. It allows |
|---|
| 1294 | ! to test on a single pixel without reading maps. |
|---|
| 1295 | IF(printlev_loc>=4) WRITE(numout,*) 'Use ::fm_change_force' |
|---|
| 1296 | fm_change_map(:,:)=fm_change_force |
|---|
| 1297 | |
|---|
| 1298 | ENDIF |
|---|
| 1299 | |
|---|
| 1300 | ENDIF |
|---|
| 1301 | |
|---|
| 1302 | ENDIF |
|---|
| 1303 | |
|---|
| 1304 | !! 1.4.5 Check time step |
|---|
| 1305 | |
|---|
| 1306 | !! 1.4.5.1 Allow STOMATE's time step to change although this is dangerous |
|---|
| 1307 | IF (dt_days /= dt_days_read) THEN |
|---|
| 1308 | WRITE(numout,*) 'slow_processes: STOMATE time step changes:', & |
|---|
| 1309 | & dt_days_read,' -> ',dt_days |
|---|
| 1310 | ENDIF |
|---|
| 1311 | |
|---|
| 1312 | !! 1.4.5.2 Time step has to be a multiple of a full day |
|---|
| 1313 | IF ( ( dt_days-REAL(NINT(dt_days),r_std) ) > min_stomate ) THEN |
|---|
| 1314 | WRITE(numout,*) 'slow_processes: STOMATE time step is not a mutiple of a full day:', & |
|---|
| 1315 | & dt_days,' days.' |
|---|
| 1316 | STOP |
|---|
| 1317 | ENDIF |
|---|
| 1318 | |
|---|
| 1319 | !! 1.4.5.3 upper limit to STOMATE's time step |
|---|
| 1320 | IF ( dt_days > max_dt_days ) THEN |
|---|
| 1321 | WRITE(numout,*) 'slow_processes: STOMATE time step exceeds the maximum value:', & |
|---|
| 1322 | & dt_days,' days > ', max_dt_days, ' days.' |
|---|
| 1323 | STOP |
|---|
| 1324 | ENDIF |
|---|
| 1325 | |
|---|
| 1326 | !! 1.4.5.4 STOMATE time step must not be less than the forcing time step |
|---|
| 1327 | IF ( dt_sechiba > dt_days*one_day ) THEN |
|---|
| 1328 | WRITE(numout,*) & |
|---|
| 1329 | & 'slow_processes: STOMATE time step ::dt_days smaller than forcing time step ::dt_sechiba' |
|---|
| 1330 | STOP |
|---|
| 1331 | ENDIF |
|---|
| 1332 | |
|---|
| 1333 | !! 1.4.5.6 Final message on time step |
|---|
| 1334 | WRITE(numout,*) 'Slow_processes, STOMATE time step (days): ', dt_days |
|---|
| 1335 | |
|---|
| 1336 | !! 1.4.6 Write forcing file for teststomate |
|---|
| 1337 | IF (allow_forcing_write) THEN |
|---|
| 1338 | |
|---|
| 1339 | !Config Key = STOMATE_FORCING_NAME |
|---|
| 1340 | !Config Desc = Name of STOMATE's forcing file |
|---|
| 1341 | !Config If = OK_STOMATE |
|---|
| 1342 | !Config Def = NONE |
|---|
| 1343 | !Config Help = Name that will be given |
|---|
| 1344 | !Config to STOMATE's offline forcing file |
|---|
| 1345 | !Config Compatible with Nicolas Viovy's driver |
|---|
| 1346 | !Config Units = [FILE] |
|---|
| 1347 | forcing_name = stomate_forcing_name |
|---|
| 1348 | CALL getin_p('STOMATE_FORCING_NAME',forcing_name) |
|---|
| 1349 | |
|---|
| 1350 | IF ( TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 1351 | |
|---|
| 1352 | !! 1.4.6.1 Calculate steps that can be stored in memory |
|---|
| 1353 | ! Action for the root processor only (parallel computing) |
|---|
| 1354 | IF (is_root_prc) CALL SYSTEM ('rm -f '//TRIM(forcing_name)) |
|---|
| 1355 | WRITE(numout,*) 'writing a forcing file for STOMATE.' |
|---|
| 1356 | |
|---|
| 1357 | !Config Key = STOMATE_FORCING_MEMSIZE |
|---|
| 1358 | !Config Desc = Size of STOMATE forcing data in memory |
|---|
| 1359 | !Config If = OK_STOMATE |
|---|
| 1360 | !Config Def = 50 |
|---|
| 1361 | !Config Help = This variable determines how many |
|---|
| 1362 | !Config forcing states will be kept in memory. |
|---|
| 1363 | !Config Must be a compromise between memory |
|---|
| 1364 | !Config use and frequeny of disk access. |
|---|
| 1365 | !Config Units = [MegaBytes] |
|---|
| 1366 | max_totsize = 50 |
|---|
| 1367 | CALL getin_p('STOMATE_FORCING_MEMSIZE', max_totsize) |
|---|
| 1368 | max_totsize = max_totsize*1000000 |
|---|
| 1369 | |
|---|
| 1370 | totsize_1step = & |
|---|
| 1371 | SIZE(clay)*KIND(clay) & |
|---|
| 1372 | +SIZE(silt)*KIND(silt) & |
|---|
| 1373 | +SIZE(bulk)*KIND(bulk) & |
|---|
| 1374 | +SIZE(humrel_daily)*KIND(humrel_daily) & |
|---|
| 1375 | +SIZE(litterhum_daily)*KIND(litterhum_daily) & |
|---|
| 1376 | +SIZE(t2m_daily)*KIND(t2m_daily) & |
|---|
| 1377 | +SIZE(t2m_min_daily)*KIND(t2m_min_daily) & |
|---|
| 1378 | +SIZE(tsurf_daily)*KIND(tsurf_daily) & |
|---|
| 1379 | +SIZE(tsoil_daily)*KIND(tsoil_daily) & |
|---|
| 1380 | +SIZE(soilhum_daily)*KIND(soilhum_daily) & |
|---|
| 1381 | +SIZE(precip_daily)*KIND(precip_daily) & |
|---|
| 1382 | +SIZE(gpp_daily_x)*KIND(gpp_daily_x) & |
|---|
| 1383 | +SIZE(veget)*KIND(veget) & |
|---|
| 1384 | +SIZE(veget_max)*KIND(veget_max) & |
|---|
| 1385 | !!$ +SIZE(lai)*KIND(lai) & |
|---|
| 1386 | +SIZE(drainage_daily)*KIND(drainage_daily) |
|---|
| 1387 | |
|---|
| 1388 | ! Totsize_1step is the size on a single processor, sum |
|---|
| 1389 | ! all processors and send to all processors |
|---|
| 1390 | CALL reduce_sum(totsize_1step,totsize_tmp) |
|---|
| 1391 | CALL bcast(totsize_tmp) |
|---|
| 1392 | totsize_1step=totsize_tmp |
|---|
| 1393 | |
|---|
| 1394 | ! Total number of forcing steps |
|---|
| 1395 | nsft = INT(one_year/(dt_stomate/one_day)) |
|---|
| 1396 | |
|---|
| 1397 | ! Number of forcing steps in memory |
|---|
| 1398 | nsfm = MIN(nsft, & |
|---|
| 1399 | MAX(1,NINT( REAL(max_totsize,r_std) & |
|---|
| 1400 | /REAL(totsize_1step,r_std)))) |
|---|
| 1401 | |
|---|
| 1402 | |
|---|
| 1403 | !! 1.6.4.2 Allocate memory for variables containing forcing data |
|---|
| 1404 | ! and initialize variables (set to zero). |
|---|
| 1405 | CALL init_forcing (kjpindex,nsfm,nsft) |
|---|
| 1406 | |
|---|
| 1407 | ! Indexing for writing forcing file |
|---|
| 1408 | isf(:) = (/ (i,i=1,nsfm) /) |
|---|
| 1409 | nf_written(:) = .FALSE. |
|---|
| 1410 | nf_cumul(:) = 0 |
|---|
| 1411 | iisf = 0 |
|---|
| 1412 | |
|---|
| 1413 | !! 1.6.4.3 Create netcdf file |
|---|
| 1414 | ! Create, define and populate a netcdf file containing the forcing data. |
|---|
| 1415 | ! For the root processor only (parallel computing). NF90_ are functions |
|---|
| 1416 | ! from and external library. |
|---|
| 1417 | IF (is_root_prc) THEN |
|---|
| 1418 | |
|---|
| 1419 | ! Create new netCDF dataset |
|---|
| 1420 | ier = NF90_CREATE (TRIM(forcing_name),NF90_SHARE,forcing_id) |
|---|
| 1421 | |
|---|
| 1422 | ! Add variable attribute |
|---|
| 1423 | ! Note ::iim_g and ::jjm_g are dimensions of the global field and |
|---|
| 1424 | ! ::nbp_glo is the number of global continental points |
|---|
| 1425 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL,'dt_sechiba',dt_sechiba) |
|---|
| 1426 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL,'dt_stomate',dt_stomate) |
|---|
| 1427 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 1428 | 'nsft',REAL(nsft,r_std)) |
|---|
| 1429 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 1430 | 'kjpij',REAL(iim_g*jjm_g,r_std)) |
|---|
| 1431 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 1432 | 'kjpindex',REAL(nbp_glo,r_std)) |
|---|
| 1433 | |
|---|
| 1434 | ! Add new dimension |
|---|
| 1435 | ier = NF90_DEF_DIM (forcing_id,'points',nbp_glo,d_id(1)) |
|---|
| 1436 | ier = NF90_DEF_DIM (forcing_id,'layers',nbdl,d_id(2)) |
|---|
| 1437 | ier = NF90_DEF_DIM (forcing_id,'pft',nvm,d_id(3)) |
|---|
| 1438 | direct=2 |
|---|
| 1439 | ier = NF90_DEF_DIM (forcing_id,'direction',direct,d_id(4)) |
|---|
| 1440 | nneigh=8 |
|---|
| 1441 | ier = NF90_DEF_DIM (forcing_id,'nneigh',nneigh,d_id(5)) |
|---|
| 1442 | ier = NF90_DEF_DIM (forcing_id,'time',NF90_UNLIMITED,d_id(6)) |
|---|
| 1443 | ier = NF90_DEF_DIM (forcing_id,'nbparts',nparts,d_id(7)) |
|---|
| 1444 | |
|---|
| 1445 | ! Add new variable |
|---|
| 1446 | ier = NF90_DEF_VAR (forcing_id,'points', r_typ,d_id(1),vid) |
|---|
| 1447 | ier = NF90_DEF_VAR (forcing_id,'layers', r_typ,d_id(2),vid) |
|---|
| 1448 | ier = NF90_DEF_VAR (forcing_id,'pft', r_typ,d_id(3),vid) |
|---|
| 1449 | ier = NF90_DEF_VAR (forcing_id,'direction', r_typ,d_id(4),vid) |
|---|
| 1450 | ier = NF90_DEF_VAR (forcing_id,'nneigh', r_typ,d_id(5),vid) |
|---|
| 1451 | ier = NF90_DEF_VAR (forcing_id,'time', r_typ,d_id(6),vid) |
|---|
| 1452 | ier = NF90_DEF_VAR (forcing_id,'nbparts', r_typ,d_id(7),vid) |
|---|
| 1453 | ier = NF90_DEF_VAR (forcing_id,'index', r_typ,d_id(1),vid) |
|---|
| 1454 | ier = NF90_DEF_VAR (forcing_id,'contfrac', r_typ,d_id(1),vid) |
|---|
| 1455 | ier = NF90_DEF_VAR (forcing_id,'lalo', & |
|---|
| 1456 | r_typ,(/ d_id(1),d_id(4) /),vid) |
|---|
| 1457 | ier = NF90_DEF_VAR (forcing_id,'neighbours', & |
|---|
| 1458 | r_typ,(/ d_id(1),d_id(5) /),vid) |
|---|
| 1459 | ier = NF90_DEF_VAR (forcing_id,'resolution', & |
|---|
| 1460 | r_typ,(/ d_id(1),d_id(4) /),vid) |
|---|
| 1461 | ier = NF90_DEF_VAR (forcing_id,'clay', & |
|---|
| 1462 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1463 | ier = NF90_DEF_VAR (forcing_id,'silt', & |
|---|
| 1464 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1465 | ier = NF90_DEF_VAR (forcing_id,'bulk', & |
|---|
| 1466 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1467 | ier = NF90_DEF_VAR (forcing_id,'humrel', & |
|---|
| 1468 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 1469 | ier = NF90_DEF_VAR (forcing_id,'litterhum', & |
|---|
| 1470 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1471 | ier = NF90_DEF_VAR (forcing_id,'t2m', & |
|---|
| 1472 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1473 | ier = NF90_DEF_VAR (forcing_id,'t2m_min', & |
|---|
| 1474 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1475 | ier = NF90_DEF_VAR (forcing_id,'tsurf', & |
|---|
| 1476 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1477 | ier = NF90_DEF_VAR (forcing_id,'tsoil', & |
|---|
| 1478 | r_typ,(/ d_id(1),d_id(2),d_id(6) /),vid) |
|---|
| 1479 | ier = NF90_DEF_VAR (forcing_id,'soilhum', & |
|---|
| 1480 | r_typ,(/ d_id(1),d_id(2),d_id(6) /),vid) |
|---|
| 1481 | ier = NF90_DEF_VAR (forcing_id,'precip', & |
|---|
| 1482 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 1483 | ier = NF90_DEF_VAR (forcing_id,'gpp', & |
|---|
| 1484 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 1485 | ier = NF90_DEF_VAR (forcing_id,'veget', & |
|---|
| 1486 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 1487 | ier = NF90_DEF_VAR (forcing_id,'veget_max', & |
|---|
| 1488 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 1489 | !!$ ier = NF90_DEF_VAR (forcing_id,'lai', & |
|---|
| 1490 | !!$ r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 1491 | ier = NF90_DEF_VAR (forcing_id,'drainage', & |
|---|
| 1492 | r_typ,(/ d_id(1),d_id(6),d_id(6) /),vid) |
|---|
| 1493 | ier = NF90_ENDDEF (forcing_id) |
|---|
| 1494 | |
|---|
| 1495 | ! Given the name of a varaible, nf90_inq_varid finds the variable |
|---|
| 1496 | ! ID (::vid). Put data value(s) into variable ::vid |
|---|
| 1497 | ier = NF90_INQ_VARID (forcing_id,'points',vid) |
|---|
| 1498 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 1499 | (/(REAL(i,r_std),i=1,nbp_glo) /)) |
|---|
| 1500 | ier = NF90_INQ_VARID (forcing_id,'layers',vid) |
|---|
| 1501 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nbdl)/)) |
|---|
| 1502 | ier = NF90_INQ_VARID (forcing_id,'pft',vid) |
|---|
| 1503 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nvm)/)) |
|---|
| 1504 | ier = NF90_INQ_VARID (forcing_id,'direction',vid) |
|---|
| 1505 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,2)/)) |
|---|
| 1506 | ier = NF90_INQ_VARID (forcing_id,'nneigh',vid) |
|---|
| 1507 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,8)/)) |
|---|
| 1508 | ier = NF90_INQ_VARID (forcing_id,'time',vid) |
|---|
| 1509 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nsft)/)) |
|---|
| 1510 | ier = NF90_INQ_VARID (forcing_id,'nbparts',vid) |
|---|
| 1511 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nparts)/)) |
|---|
| 1512 | ier = NF90_INQ_VARID (forcing_id,'index',vid) |
|---|
| 1513 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(index_g,r_std)) |
|---|
| 1514 | ier = NF90_INQ_VARID (forcing_id,'contfrac',vid) |
|---|
| 1515 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(contfrac_g,r_std)) |
|---|
| 1516 | ier = NF90_INQ_VARID (forcing_id,'lalo',vid) |
|---|
| 1517 | ier = NF90_PUT_VAR (forcing_id,vid,lalo_g) |
|---|
| 1518 | !ym attention a neighbours, a modifier plus tard |
|---|
| 1519 | ier = NF90_INQ_VARID (forcing_id,'neighbours',vid) |
|---|
| 1520 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(neighbours_g,r_std)) |
|---|
| 1521 | ier = NF90_INQ_VARID (forcing_id,'resolution',vid) |
|---|
| 1522 | ier = NF90_PUT_VAR (forcing_id,vid,resolution_g) |
|---|
| 1523 | ENDIF ! is_root_prc |
|---|
| 1524 | ENDIF ! (forcing_name) /= 'NONE' |
|---|
| 1525 | ENDIF |
|---|
| 1526 | |
|---|
| 1527 | !! 1.4.7 write forcing file for forcesoil |
|---|
| 1528 | !! 1.4.7.1 Initialize |
|---|
| 1529 | !Config Key = STOMATE_CFORCING_NAME |
|---|
| 1530 | !Config Desc = Name of STOMATE's carbon forcing file |
|---|
| 1531 | !Config If = OK_STOMATE |
|---|
| 1532 | !Config Def = NONE |
|---|
| 1533 | !Config Help = Name that will be given to STOMATE's carbon |
|---|
| 1534 | !Config offline forcing file |
|---|
| 1535 | !Config Compatible with Nicolas Viovy's driver |
|---|
| 1536 | !Config Units = [FILE] |
|---|
| 1537 | Cforcing_name = stomate_Cforcing_name |
|---|
| 1538 | CALL getin_p('STOMATE_CFORCING_NAME',Cforcing_name) |
|---|
| 1539 | |
|---|
| 1540 | IF ( TRIM(Cforcing_name) /= 'NONE' ) THEN |
|---|
| 1541 | |
|---|
| 1542 | ! Time step of forcesoil |
|---|
| 1543 | !Config Key = FORCESOIL_STEP_PER_YEAR |
|---|
| 1544 | !Config Desc = Number of time steps per year for carbon spinup. |
|---|
| 1545 | !Config If = OK_STOMATE |
|---|
| 1546 | !Config Def = 365 |
|---|
| 1547 | !Config Help = Number of time steps per year for carbon spinup. |
|---|
| 1548 | !Config Units = [days, months, year] |
|---|
| 1549 | nparan = 365 |
|---|
| 1550 | CALL getin_p('FORCESOIL_STEP_PER_YEAR', nparan) |
|---|
| 1551 | |
|---|
| 1552 | ! Correct if setting is out of bounds |
|---|
| 1553 | IF ( nparan < 1 ) nparan = 1 |
|---|
| 1554 | |
|---|
| 1555 | !Config Key = FORCESOIL_NB_YEAR |
|---|
| 1556 | !Config Desc = Number of years saved for carbon spinup. |
|---|
| 1557 | !Config If = OK_STOMATE |
|---|
| 1558 | !Config Def = 1 |
|---|
| 1559 | !Config Help = Number of years saved for carbon spinup. If internal parameter cumul_Cforcing is TRUE in stomate.f90 |
|---|
| 1560 | !Config Then this parameter is forced to one. |
|---|
| 1561 | !Config Units = [years] |
|---|
| 1562 | CALL getin_p('FORCESOIL_NB_YEAR', nbyear) |
|---|
| 1563 | |
|---|
| 1564 | ! Set ::nbyear to 1. if ::cumul_Cforcing=.TRUE. |
|---|
| 1565 | IF ( cumul_Cforcing ) THEN |
|---|
| 1566 | CALL ipslerr_p (1,'stomate', & |
|---|
| 1567 | 'Internal parameter cumul_Cforcing is TRUE in stomate.f90', & |
|---|
| 1568 | 'Parameter FORCESOIL_NB_YEAR is therefore forced to 1.', & |
|---|
| 1569 | '::nbyear is thus set to 1.') |
|---|
| 1570 | nbyear=1 |
|---|
| 1571 | ENDIF |
|---|
| 1572 | |
|---|
| 1573 | ! Make use of ::nparan to calculate ::dt_forcesoil |
|---|
| 1574 | dt_forcesoil = zero |
|---|
| 1575 | nparan = nparan+1 |
|---|
| 1576 | DO WHILE ( dt_forcesoil < dt_stomate/one_day ) |
|---|
| 1577 | nparan = nparan-1 |
|---|
| 1578 | IF ( nparan < 1 ) THEN |
|---|
| 1579 | STOP 'Problem with number of soil forcing time steps ::nparan < 1.' |
|---|
| 1580 | ENDIF |
|---|
| 1581 | dt_forcesoil = one_year/REAL(nparan,r_std) |
|---|
| 1582 | ENDDO |
|---|
| 1583 | IF ( nparan > nparanmax ) THEN |
|---|
| 1584 | STOP 'Problem with number of soil forcing time steps ::nparan > ::nparanmax' |
|---|
| 1585 | ENDIF |
|---|
| 1586 | WRITE(numout,*) 'Time step of soil forcing (d): ',dt_forcesoil |
|---|
| 1587 | |
|---|
| 1588 | ! Allocate memory for the forcing variables of soil dynamics |
|---|
| 1589 | ALLOCATE( nforce(nparan*nbyear)) |
|---|
| 1590 | nforce(:) = 0 |
|---|
| 1591 | ALLOCATE(control_moist(kjpindex,nlevs,nparan*nbyear)) |
|---|
| 1592 | ALLOCATE(npp_equil(kjpindex,nparan*nbyear)) |
|---|
| 1593 | ALLOCATE(npp_tot(kjpindex)) |
|---|
| 1594 | ALLOCATE(control_temp(kjpindex,nlevs,nparan*nbyear)) |
|---|
| 1595 | ALLOCATE(carbon_input(kjpindex,ncarb,nvm,nparan*nbyear)) |
|---|
| 1596 | ALLOCATE(nitrogen_input(kjpindex,ncarb,nvm,nparan*nbyear)) |
|---|
| 1597 | ALLOCATE(drainage(kjpindex,nvm,nparan*nbyear)) |
|---|
| 1598 | |
|---|
| 1599 | ! Initialize variables, set to zero |
|---|
| 1600 | control_moist(:,:,:) = zero |
|---|
| 1601 | npp_equil(:,:) = zero |
|---|
| 1602 | npp_tot(:) = zero |
|---|
| 1603 | control_temp(:,:,:) = zero |
|---|
| 1604 | carbon_input(:,:,:,:) = zero |
|---|
| 1605 | nitrogen_input(:,:,:,:) = zero |
|---|
| 1606 | drainage(:,:,:) = zero |
|---|
| 1607 | ENDIF ! Cforcing_name) /= 'NONE' |
|---|
| 1608 | |
|---|
| 1609 | !! 1.4.8 Calculate STOMATE's vegetation fractions from veget, veget_max |
|---|
| 1610 | DO j=1,nvm |
|---|
| 1611 | WHERE ((1.-totfrac_nobio(:)) > min_sechiba) |
|---|
| 1612 | ! Pixels with vegetation |
|---|
| 1613 | veget_cov(:,j) = veget(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1614 | veget_cov_max(:,j) = veget_max(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1615 | ELSEWHERE |
|---|
| 1616 | ! Pixels without vegetation |
|---|
| 1617 | veget_cov(:,j) = zero |
|---|
| 1618 | veget_cov_max(:,j) = zero |
|---|
| 1619 | ENDWHERE |
|---|
| 1620 | ENDDO ! Loop over PFTs |
|---|
| 1621 | |
|---|
| 1622 | !! 1.4.9 Initialize non-zero variables |
|---|
| 1623 | CALL stomate_var_init & |
|---|
| 1624 | (kjpindex, veget_cov_max, leaf_age, leaf_frac, & |
|---|
| 1625 | dead_leaves, & |
|---|
| 1626 | veget_cov, deadleaf_cover, assim_param, & |
|---|
| 1627 | circ_class_biomass, circ_class_n) |
|---|
| 1628 | |
|---|
| 1629 | l_error =.FALSE. |
|---|
| 1630 | ALLOCATE(circ_class_dist(ncirc),stat=ier) |
|---|
| 1631 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1632 | IF (l_error) THEN |
|---|
| 1633 | WRITE(numout,*) ' Memory allocation error for circ_class_dist. ' // & |
|---|
| 1634 | 'We need ncirc words = ',ncirc |
|---|
| 1635 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1636 | 'Memory allocation error for circ_class_dist','','') |
|---|
| 1637 | END IF |
|---|
| 1638 | !Config Key = CIRC_CLASS_DIST |
|---|
| 1639 | !Config Desc = The tree distribution to target if we have to redistribute. |
|---|
| 1640 | !Config if = OK_STOMATE |
|---|
| 1641 | !Config Def = 1 |
|---|
| 1642 | !Config Help = |
|---|
| 1643 | !Config Units = [-] |
|---|
| 1644 | circ_class_dist(:)=un |
|---|
| 1645 | CALL getin_p('CIRC_CLASS_DIST',circ_class_dist) |
|---|
| 1646 | |
|---|
| 1647 | ! Now we normalize the distribution |
|---|
| 1648 | temp_total=SUM(circ_class_dist(:)) |
|---|
| 1649 | circ_class_dist(:)=circ_class_dist(:)/temp_total |
|---|
| 1650 | WRITE(numout,*) 'Target distribution for renormalization: ',circ_class_dist(:) |
|---|
| 1651 | |
|---|
| 1652 | ALLOCATE(st_dist(ncirc),stat=ier) |
|---|
| 1653 | l_error = l_error .OR. (ier /= 0) |
|---|
| 1654 | IF (l_error) THEN |
|---|
| 1655 | WRITE(numout,*) ' Memory allocation error for st_dist. ' // & |
|---|
| 1656 | 'We need ncirc words = ',ncirc |
|---|
| 1657 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 1658 | ' Memory allocation error for st_dist.','','') |
|---|
| 1659 | END IF |
|---|
| 1660 | !Config Key = ST_DIST |
|---|
| 1661 | !Config Desc = The distribution for killing trees in self-thinning. |
|---|
| 1662 | !Config if = OK_STOMATE |
|---|
| 1663 | !Config Def = circ_class_dist |
|---|
| 1664 | !Config Help = |
|---|
| 1665 | !Config Units = [-] |
|---|
| 1666 | st_dist(:)=circ_class_dist(:) |
|---|
| 1667 | CALL getin_p('ST_DIST',st_dist) |
|---|
| 1668 | |
|---|
| 1669 | ! Now we normalize the distribution |
|---|
| 1670 | temp_total=SUM(st_dist(:)) |
|---|
| 1671 | st_dist(:)=st_dist(:)/temp_total |
|---|
| 1672 | WRITE(numout,*) 'Target distribution for self-thinning: ',st_dist(:) |
|---|
| 1673 | |
|---|
| 1674 | END SUBROUTINE stomate_initialize |
|---|
| 1675 | |
|---|
| 1676 | |
|---|
| 1677 | !! ================================================================================================================================ |
|---|
| 1678 | !! SUBROUTINE : stomate_main |
|---|
| 1679 | !! |
|---|
| 1680 | !>\BRIEF Manages variable initialisation, reading and writing forcing |
|---|
| 1681 | !! files, aggregating data at stomate's time step (dt_stomate), aggregating data |
|---|
| 1682 | !! at longer time scale (i.e. for phenology) and uses these forcing to calculate |
|---|
| 1683 | !! CO2 fluxes (NPP and respirations) and C-pools (litter, soil, biomass, ...) |
|---|
| 1684 | !! |
|---|
| 1685 | !! DESCRIPTION : The subroutine manages |
|---|
| 1686 | !! divers tasks: |
|---|
| 1687 | !! (1) Initializing all variables of stomate (first call) |
|---|
| 1688 | !! (2) Reading and writing forcing data (last call) |
|---|
| 1689 | !! (3) Adding CO2 fluxes to the IPCC history files |
|---|
| 1690 | !! (4) Converting the time steps of variables to maintain consistency between |
|---|
| 1691 | !! sechiba and stomate |
|---|
| 1692 | !! (5) Use these variables to call stomate_lpj, maint_respiration, littercalc, |
|---|
| 1693 | !! som. The called subroutines handle: climate constraints |
|---|
| 1694 | !! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 1695 | !! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 1696 | !! all turnover processes, light competition, sapling establishment, lai, |
|---|
| 1697 | !! land cover change and litter and soil dynamics. |
|---|
| 1698 | !! (6) Use the spin-up method developed by Lardy (2011)(only if SPINUP_ANALYTIC |
|---|
| 1699 | !! is set to TRUE). |
|---|
| 1700 | !! |
|---|
| 1701 | !! RECENT CHANGE(S) : None |
|---|
| 1702 | !! |
|---|
| 1703 | !! MAIN OUTPUT VARIABLE(S): deadleaf_cover, assim_param, lai, height, veget_cov, |
|---|
| 1704 | !! veget_cov_max, resp_maint, |
|---|
| 1705 | !! resp_hetero,resp_growth, co2_flux, fco2_lu. |
|---|
| 1706 | !! |
|---|
| 1707 | !! REFERENCES : |
|---|
| 1708 | !! - Lardy, R, et al., A new method to determine soil organic carbon equilibrium, |
|---|
| 1709 | !! Environmental Modelling & Software (2011), doi:10.1016|j.envsoft.2011.05.016 |
|---|
| 1710 | !! |
|---|
| 1711 | !! FLOWCHART : |
|---|
| 1712 | !! \latexonly |
|---|
| 1713 | !! \includegraphics[scale=0.5]{stomatemainflow.png} |
|---|
| 1714 | !! \endlatexonly |
|---|
| 1715 | !! \n |
|---|
| 1716 | !_ ================================================================================================================================ |
|---|
| 1717 | |
|---|
| 1718 | SUBROUTINE stomate_main & |
|---|
| 1719 | & (kjit, kjpij, kjpindex, & |
|---|
| 1720 | & index, lalo, neighbours, resolution, contfrac, & |
|---|
| 1721 | & totfrac_nobio, clay, silt, bulk, & |
|---|
| 1722 | & t2m, temp_sol, stempdiag, & |
|---|
| 1723 | & humrel, shumdiag, litterhumdiag, precip_rain, precip_snow, & |
|---|
| 1724 | & tmc_pft, drainage_pft, swc_pft, gpp, & |
|---|
| 1725 | & deadleaf_cover, assim_param, & |
|---|
| 1726 | & frac_age, height, veget, veget_max, & |
|---|
| 1727 | & veget_max_new, totfrac_nobio_new, & |
|---|
| 1728 | & hist_id, hist2_id, rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 1729 | & co2_flux, fco2_lu, resp_maint, resp_hetero, & |
|---|
| 1730 | & resp_growth, temp_growth, & |
|---|
| 1731 | & soil_pH, pb, n_input, circ_class_biomass, & |
|---|
| 1732 | & circ_class_n, lai_per_level, & |
|---|
| 1733 | & laieff_fit, h_array_out, z_array_out, max_height_store, & |
|---|
| 1734 | & transpir, transpir_mod, transpir_supply, vir_transpir_supply, & |
|---|
| 1735 | & coszang, stressed, unstressed, Isotrop_Tran_Tot_p, & |
|---|
| 1736 | & u, v) |
|---|
| 1737 | |
|---|
| 1738 | IMPLICIT NONE |
|---|
| 1739 | |
|---|
| 1740 | |
|---|
| 1741 | !! 0. Variable and parameter declaration |
|---|
| 1742 | |
|---|
| 1743 | !! 0.1 Input variables |
|---|
| 1744 | |
|---|
| 1745 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 1746 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 1747 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 1748 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 1749 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 1750 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 1751 | !! (unitless) |
|---|
| 1752 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! Indices of the pixels on the map. Stomate uses a |
|---|
| 1753 | !! reduced grid excluding oceans. ::index contains |
|---|
| 1754 | !! the indices of the terrestrial pixels only |
|---|
| 1755 | !! (unitless) |
|---|
| 1756 | INTEGER(i_std),DIMENSION(kjpindex,8),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM |
|---|
| 1757 | !! (unitless) |
|---|
| 1758 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) |
|---|
| 1759 | !! for pixels (degrees) |
|---|
| 1760 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of |
|---|
| 1761 | !! the gridbox |
|---|
| 1762 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 1763 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio !! Fraction of grid cell covered by lakes, land |
|---|
| 1764 | !! ice, cities, ... (unitless) |
|---|
| 1765 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 1766 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 1767 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 1768 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: humrel !! Relative humidity ("moisture availability") |
|---|
| 1769 | !! (0-1, unitless) |
|---|
| 1770 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: t2m !! 2 m air temperature (K) |
|---|
| 1771 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: temp_sol !! Surface temperature (K) |
|---|
| 1772 | REAL(r_std),DIMENSION(kjpindex,nbdl),INTENT(in) :: stempdiag !! Soil temperature (K) |
|---|
| 1773 | REAL(r_std),DIMENSION(kjpindex,nbdl),INTENT(in) :: shumdiag !! Relative soil moisture (0-1, unitless) |
|---|
| 1774 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: litterhumdiag !! Litter humidity (0-1, unitless) |
|---|
| 1775 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: transpir !! transpiration @tex $(kg m^{-2} timestep^{-1})$ |
|---|
| 1776 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: transpir_mod !! transpir divided by veget_cov_max |
|---|
| 1777 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: transpir_supply !! Supply of water for transpiration @tex $(mm dt^{-1})$ @endtex |
|---|
| 1778 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: vir_transpir_supply !! Virtual supply of water for transpiration to deal |
|---|
| 1779 | !! with water stress when PFT1 becomes vegetated in LCC |
|---|
| 1780 | !! @tex $(mm dt^{-1})$ @endtex |
|---|
| 1781 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: precip_rain !! Rain precipitation |
|---|
| 1782 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1783 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: precip_snow !! Snow precipitation |
|---|
| 1784 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1785 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: tmc_pft !! Total soil water per PFT (mm/m2) |
|---|
| 1786 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: drainage_pft !! Drainage per PFT (mm/m2) |
|---|
| 1787 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: swc_pft !! Relative Soil water content [tmcr:tmcs] per pft (-) |
|---|
| 1788 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: gpp !! GPP of total ground area |
|---|
| 1789 | |
|---|
| 1790 | ! Import wind speed from stomate_main via slowproc |
|---|
| 1791 | REAL(r_std),DIMENSION(kjpindex),INTENT (in) :: u !! Lowest level wind speed in direction u (m/s) |
|---|
| 1792 | REAL(r_std),DIMENSION(kjpindex),INTENT (in) :: v !! Lowest level wind speed in direction v (m/s) |
|---|
| 1793 | |
|---|
| 1794 | |
|---|
| 1795 | !! @tex $(gC m^{-2} time step^{-1})$ @endtex |
|---|
| 1796 | !! Calculated in sechiba, account for vegetation |
|---|
| 1797 | !! cover and effective time step to obtain ::gpp_d |
|---|
| 1798 | |
|---|
| 1799 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: veget_max_new !! New "maximal" coverage fraction of a PFT: only if |
|---|
| 1800 | !! vegetation is updated in slowproc |
|---|
| 1801 | |
|---|
| 1802 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio_new !! Old fraction of nobio per gridcell |
|---|
| 1803 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: soil_pH !! soil pH |
|---|
| 1804 | REAL(r_std),DIMENSION(kjpindex), INTENT(in) :: pb !! Air pressure (hPa) |
|---|
| 1805 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: n_input !! Nitrogen inputs into the soil (gN/m**2/timestep) |
|---|
| 1806 | |
|---|
| 1807 | INTEGER(i_std),INTENT(in) :: hist_id !! ?? [DISPENSABLE] SECHIBA's _history_ file |
|---|
| 1808 | !! identifier |
|---|
| 1809 | INTEGER(i_std),INTENT(in) :: hist2_id !! ?? [DISPENSABLE] SECHIBA's _history_ file 2 |
|---|
| 1810 | !! identifier |
|---|
| 1811 | REAL(r_std),DIMENSION(kjpindex), INTENT(in) :: coszang !! the cosine of the zenith angle |
|---|
| 1812 | REAL(r_std),DIMENSION (:,:,:), INTENT (in) :: Isotrop_Tran_Tot_p!! Transmitted radiation per level (unitless) |
|---|
| 1813 | |
|---|
| 1814 | |
|---|
| 1815 | !! 0.2 Output variables |
|---|
| 1816 | |
|---|
| 1817 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_flux !! CO2 flux between atmosphere and biosphere per |
|---|
| 1818 | !! average ground area |
|---|
| 1819 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1820 | !! [??CHECK] sign convention? |
|---|
| 1821 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: fco2_lu !! CO2 flux between atmosphere and biosphere from |
|---|
| 1822 | !! land-use (without forest management) |
|---|
| 1823 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1824 | !! [??CHECK] sign convention? |
|---|
| 1825 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_maint !! Maitenance component of autotrophic respiration in |
|---|
| 1826 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1827 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_growth !! Growth component of autotrophic respiration in |
|---|
| 1828 | !! @tex ($gC m^{-2} dt_stomate^{-1}$) @endtex |
|---|
| 1829 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_hetero !! Heterotrophic respiration in |
|---|
| 1830 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1831 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: temp_growth !! Growth temperature (ðC) |
|---|
| 1832 | !! Is equal to t2m_month |
|---|
| 1833 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: max_height_store !! ??? |
|---|
| 1834 | |
|---|
| 1835 | |
|---|
| 1836 | !! 0.3 Modified |
|---|
| 1837 | |
|---|
| 1838 | !!$ REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: lai !! Leaf area inex @tex $(m^2 m^{-2})$ @endtex |
|---|
| 1839 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 1840 | !! non-biological fraction (unitless) |
|---|
| 1841 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 1842 | !! non-biological fraction (unitless) |
|---|
| 1843 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: height !! Height of vegetation (m) |
|---|
| 1844 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(inout) :: assim_param !! min+max+opt temperatures (K) & vmax, nue and leaf N for |
|---|
| 1845 | !! photosynthesis |
|---|
| 1846 | !! @tex $(\mu mol m^{-2}s^{-1})$ @endtex |
|---|
| 1847 | REAL(r_std),DIMENSION(kjpindex),INTENT(inout) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 1848 | !! (unitless) |
|---|
| 1849 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages), & !! Age efficacity from STOMATE |
|---|
| 1850 | INTENT(inout) :: frac_age |
|---|
| 1851 | REAL(r_std), DIMENSION(kjpindex,nvm,ncirc,nparts,nelements), & !! Biomass per circumference class @tex $(gC tree^{-1})$ @endtex |
|---|
| 1852 | INTENT(inout) :: circ_class_biomass |
|---|
| 1853 | REAL(r_std), DIMENSION(kjpindex,nvm,ncirc), & !! Number of trees within each circumference |
|---|
| 1854 | INTENT(inout) :: circ_class_n !! Biomass per PFT |
|---|
| 1855 | REAL(r_std), DIMENSION(:,:,:), INTENT(inout) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 1856 | !! @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 1857 | TYPE(laieff_type),DIMENSION (:,:,:), INTENT(inout) :: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 1858 | |
|---|
| 1859 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: stressed !! adjusted ecosystem functioning. Takes the unit of the variable |
|---|
| 1860 | !! used as a proxy for waterstress (assigned in sechiba). |
|---|
| 1861 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: unstressed !! initial ecosystem functioning after the first calculation and |
|---|
| 1862 | !! before any recalculations. Takes the unit of the variable used |
|---|
| 1863 | !! as a proxy for unstressed (assigned in sechiba). |
|---|
| 1864 | REAL(r_std),DIMENSION(:,:,:,:), INTENT(inout) :: h_array_out !! An output of h_array, to use in sechiba |
|---|
| 1865 | REAL(r_std),DIMENSION(:,:,:,:), INTENT(inout) :: z_array_out !! An output of h_array, to use in sechiba |
|---|
| 1866 | |
|---|
| 1867 | |
|---|
| 1868 | !! 0.4 local variables |
|---|
| 1869 | |
|---|
| 1870 | CHARACTER(LEN=2), DIMENSION(nelements) :: element_str !! string suffix indicating element |
|---|
| 1871 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 1872 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 1873 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 1874 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 1875 | REAL(r_std),DIMENSION(0:nbdl) :: z_soil !! Variable to store depth of the different soil |
|---|
| 1876 | !! layers (m) |
|---|
| 1877 | REAL(r_std),DIMENSION(kjpindex,nvm) :: rprof !! Coefficient of the exponential functions that |
|---|
| 1878 | !! relates root density to soil depth (unitless) |
|---|
| 1879 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 1880 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 1881 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 1882 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 1883 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1884 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 1885 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1886 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_litter !! Litter heterotrophic respiration per ground area |
|---|
| 1887 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1888 | !! ??Same variable is also used to |
|---|
| 1889 | !! store heterotrophic respiration per ground area |
|---|
| 1890 | !! over ::dt_sechiba?? |
|---|
| 1891 | REAL(r_std),DIMENSION(nvm) :: ld_redistribute !! logical set to redistribute som and litter |
|---|
| 1892 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_soil !! soil heterotrophic respiration |
|---|
| 1893 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1894 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 1895 | !! covered by a PFT (fraction of ground area), |
|---|
| 1896 | !! taking into account LAI ??(= grid scale fpc)?? |
|---|
| 1897 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov_max_new !! Old value for maximal fractional coverage (unitless) |
|---|
| 1898 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Maximum rate of carboxylation |
|---|
| 1899 | REAL(r_std),DIMENSION(kjpindex,nvm) :: nue !! Nitrogen use Efficiency with impact of leaf age (umol CO2 (gN)-1 s-1) |
|---|
| 1900 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 1901 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 1902 | !! (0-1, unitless) |
|---|
| 1903 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 1904 | !! respiration, above and below (0-1, unitless) |
|---|
| 1905 | REAL(r_std),DIMENSION(kjpindex,ncarb,nvm,nelements) :: som_input_inst !! Quantity of carbon going into carbon pools from |
|---|
| 1906 | !! litter decomposition |
|---|
| 1907 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1908 | ! REAL(r_std),DIMENSION(kjpindex,nvm,nnspec) :: soil_n_min !! Mineral nitrogen in the soil |
|---|
| 1909 | ! !! @tex $(gN m^{-2})$ @endtex |
|---|
| 1910 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 1911 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time |
|---|
| 1912 | !! step |
|---|
| 1913 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 1914 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 1915 | !! time step on one processor (Mb) |
|---|
| 1916 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 1917 | !! time step on all processors(Mb) |
|---|
| 1918 | REAL(r_std) :: xn !! How many times have we treated in this forcing |
|---|
| 1919 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 1920 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 1921 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 1922 | INTEGER(i_std) :: direct !! ?? |
|---|
| 1923 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! ?? |
|---|
| 1924 | !!$ REAL(r_std) :: net_co2_flux_monthly !! ??[DISPENSABLE] |
|---|
| 1925 | !!$ REAL(r_std) :: net_co2_flux_monthly_sum !! ??[DISPENSABLE] |
|---|
| 1926 | !!$ REAL(r_std) :: net_cflux_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1927 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1928 | !!$ !! computing |
|---|
| 1929 | !!$ REAL(r_std) :: net_cflux_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1930 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1931 | !!$ !! computing |
|---|
| 1932 | !!$ REAL(r_std) :: net_harvest_above_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1933 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1934 | !!$ !! computing |
|---|
| 1935 | !!$ REAL(r_std) :: net_harvest_above_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1936 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1937 | !!$ !! computing |
|---|
| 1938 | !!$ REAL(r_std) :: net_biosp_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1939 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1940 | !!$ !! computing |
|---|
| 1941 | !!$ REAL(r_std) :: net_biosp_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1942 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 1943 | !!$ !! computing |
|---|
| 1944 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 1945 | !! used by ORCHIDEE |
|---|
| 1946 | REAL(r_std), DIMENSION(kjpindex,nvm,nionspec) :: plant_n_uptake !! Uptake of soil N by plants |
|---|
| 1947 | !! (gN/m**2/timestep) |
|---|
| 1948 | REAL(r_std), DIMENSION(kjpindex,nvm) :: n_mineralisation !! net nitrogen mineralisation of decomposing SOM |
|---|
| 1949 | !! (gN/m**2/day), supposed to be NH4 |
|---|
| 1950 | REAL(r_std), DIMENSION(kjpindex,nvm) :: n_fungivores !! Fraction of N released for plant uptake due to |
|---|
| 1951 | !! fungivore consumption. |
|---|
| 1952 | REAL(r_std), DIMENSION(kjpindex,nvm) :: resp_total_soil !! soil heterotrophic respiration (gC/day/m**2 by PFT) |
|---|
| 1953 | REAL(r_std), DIMENSION(kjpindex,nvm,ncarb) :: CN_target !! C to N ratio of SOM flux from one pool to another (gN m-2 dt-1) |
|---|
| 1954 | REAL(r_std), DIMENSION(kjpindex,nvm) :: tau_eff_root !! Effective root turnover time that accounts |
|---|
| 1955 | !! waterstress (days) |
|---|
| 1956 | REAL(r_std), DIMENSION(kjpindex,nvm) :: tau_eff_sap !! Effective sapwood turnover time that accounts |
|---|
| 1957 | !! waterstress (days) |
|---|
| 1958 | REAL(r_std), DIMENSION(kjpindex,nvm) :: tau_eff_leaf !! Effective leaf turnover time that accounts |
|---|
| 1959 | !! waterstress (days) |
|---|
| 1960 | REAL(r_std), DIMENSION(kjpindex,nvm) :: wstress_adapt !! Factor to account for a long acclimation of |
|---|
| 1961 | !! of the PFT to the long-term waterstress in |
|---|
| 1962 | !! the pixel |
|---|
| 1963 | REAL(r_std), DIMENSION(kjpindex,nvm,ninput) :: input_dt_sechiba !! Used to add pft index to N inputs |
|---|
| 1964 | REAL(r_std), DIMENSION(kjpindex,nvm,nionspec) :: leaching !! mineral nitrogen leached from the soil |
|---|
| 1965 | REAL(r_std), DIMENSION(kjpindex,nvm,nnspec) :: emission !! volatile losses of nitrogen (gN/m**2/timestep) |
|---|
| 1966 | REAL(r_std), DIMENSION(kjpindex,nvm,nmbcomp,nelements) & |
|---|
| 1967 | :: check_intern !! Contains the components of the internal |
|---|
| 1968 | !! mass balance chech for this routine |
|---|
| 1969 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 1970 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: closure_intern !! Check closure of internal mass balance |
|---|
| 1971 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 1972 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: pool_start !! Start and end pool of this routine |
|---|
| 1973 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 1974 | REAL(r_std), DIMENSION(kjpindex,nvm,nelements) :: pool_end !! Start and end pool of this routine |
|---|
| 1975 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
|---|
| 1976 | REAL(r_std), DIMENSION(kjpindex) :: pixel_area !! surface area of the pixel @tex ($m^{2}$) |
|---|
| 1977 | REAL(r_std), DIMENSION(kjpindex,nvm) :: veget_cov_max_begin !! veget_max at the start of the routine. |
|---|
| 1978 | !! Used for consistency checks |
|---|
| 1979 | REAL(r_std), DIMENSION(kjpindex,nelements) :: mass_balance_closure !! Missing mass in the carbon balance |
|---|
| 1980 | !! @tex $(gC(N) pixel^{-1} dt^{-1})$ @endtex |
|---|
| 1981 | REAL(r_std), DIMENSION(kjpindex,nvm) :: nbp !! Pool-based Net Biome production for each |
|---|
| 1982 | !! time step |
|---|
| 1983 | INTEGER(i_std) :: inspec, ininput, inionspec !! Indices |
|---|
| 1984 | INTEGER(i_std) :: ipts, ivm, ilitt, ilev, icir !! Indices |
|---|
| 1985 | INTEGER(i_std) :: icarb, ipar, iele, imbc !! Indices |
|---|
| 1986 | |
|---|
| 1987 | ! Light for recruitment |
|---|
| 1988 | REAL(r_std),DIMENSION (kjpindex,nvm,nlevels_tot) & |
|---|
| 1989 | :: light_tran_to_level !! Fraction of light transmitted to a given canopy level |
|---|
| 1990 | REAL(r_std),DIMENSION(kjpindex,nvm) :: count_daylight !! Time steps dt_radia during daylight |
|---|
| 1991 | |
|---|
| 1992 | ! Harvest area and wind speed for Windthrow |
|---|
| 1993 | REAL(r_std), DIMENSION(kjpindex,nvm,wind_years) :: harvest_5y_area !! total harvested area in the last 5 years |
|---|
| 1994 | REAL(r_std), DIMENSION(kjpindex) :: wind_speed_actual !! Actualwind speed calculated from the actual half hourly |
|---|
| 1995 | !! values u and v as given in the driver (ms-1) |
|---|
| 1996 | |
|---|
| 1997 | !_ ================================================================================================================================ |
|---|
| 1998 | |
|---|
| 1999 | !! 1. Initialize variables |
|---|
| 2000 | |
|---|
| 2001 | !! 1.1 Store current time step in a common variable |
|---|
| 2002 | itime = kjit |
|---|
| 2003 | |
|---|
| 2004 | !![DISPENSABLE] 1.2 Copy the depth of the different soil layers from diaglev specified in slow_proc |
|---|
| 2005 | |
|---|
| 2006 | !printlev=get_printlev('stomate') |
|---|
| 2007 | |
|---|
| 2008 | !! 1.3 PFT rooting depth across pixels, humescte is pre-defined |
|---|
| 2009 | ! (constantes_veg.f90). It is defined as the coefficient of an exponential |
|---|
| 2010 | ! function relating root density to depth |
|---|
| 2011 | DO j=1,nvm |
|---|
| 2012 | rprof(:,j) = 1./humcste(j) |
|---|
| 2013 | ENDDO |
|---|
| 2014 | |
|---|
| 2015 | !! 1.4 Initialize first call |
|---|
| 2016 | ! Set growth respiration to zero |
|---|
| 2017 | resp_growth(:,:) = zero |
|---|
| 2018 | atm_to_bm(:,:,:) = zero |
|---|
| 2019 | plant_n_uptake(:,:,:) = zero |
|---|
| 2020 | n_mineralisation(:,:) = zero |
|---|
| 2021 | mass_balance_closure(:,:) = zero |
|---|
| 2022 | |
|---|
| 2023 | |
|---|
| 2024 | ! Check that initialization is done |
|---|
| 2025 | IF (l_first_stomate) CALL ipslerr_p(3,'stomate_main','Initialization not yet done.','','') |
|---|
| 2026 | |
|---|
| 2027 | IF (printlev_loc >= 2) THEN |
|---|
| 2028 | IF(do_slow)THEN |
|---|
| 2029 | WRITE(numout,*) 'stomate_main: date=',date,' ymds=', year, month, day, sec, ' itime=', itime, ' do_slow=',do_slow |
|---|
| 2030 | ENDIF |
|---|
| 2031 | ENDIF |
|---|
| 2032 | |
|---|
| 2033 | !! 3. Special treatment for some input arrays. |
|---|
| 2034 | |
|---|
| 2035 | !! 3.1 Sum of liquid and solid precipitation |
|---|
| 2036 | precip(:) = ( precip_rain(:) + precip_snow(:) )*one_day/dt_sechiba |
|---|
| 2037 | |
|---|
| 2038 | !! 3.2 Calculate STOMATE's vegetation fractions from veget and veget_max |
|---|
| 2039 | DO j=1,nvm |
|---|
| 2040 | WHERE ((1.-totfrac_nobio(:)) > min_sechiba) |
|---|
| 2041 | ! Pixels with vegetation |
|---|
| 2042 | veget_cov(:,j) = veget(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 2043 | veget_cov_max(:,j) = veget_max(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 2044 | ELSEWHERE |
|---|
| 2045 | ! Pixels without vegetation |
|---|
| 2046 | veget_cov(:,j) = zero |
|---|
| 2047 | veget_cov_max(:,j) = zero |
|---|
| 2048 | ENDWHERE |
|---|
| 2049 | ENDDO |
|---|
| 2050 | |
|---|
| 2051 | IF ( do_now_stomate_lcchange ) THEN |
|---|
| 2052 | DO j=1,nvm |
|---|
| 2053 | WHERE ((1.-totfrac_nobio_new(:)) > min_sechiba) |
|---|
| 2054 | ! Pixels with vegetation |
|---|
| 2055 | veget_cov_max_new(:,j) = veget_max_new(:,j)/( 1.-totfrac_nobio_new(:) ) |
|---|
| 2056 | ELSEWHERE |
|---|
| 2057 | ! Pixels without vegetation |
|---|
| 2058 | veget_cov_max_new(:,j) = zero |
|---|
| 2059 | ENDWHERE |
|---|
| 2060 | ENDDO |
|---|
| 2061 | ENDIF |
|---|
| 2062 | |
|---|
| 2063 | !! 3.3 Adjust time step of GPP |
|---|
| 2064 | ! No GPP for bare soil |
|---|
| 2065 | gpp_d(:,1) = zero |
|---|
| 2066 | ! GPP per PFT |
|---|
| 2067 | DO j = 2,nvm |
|---|
| 2068 | WHERE (veget_cov_max(:,j) > min_stomate) |
|---|
| 2069 | ! The PFT is available on the pixel |
|---|
| 2070 | gpp_d(:,j) = gpp(:,j)/ veget_cov_max(:,j)* one_day/dt_sechiba |
|---|
| 2071 | ELSEWHERE |
|---|
| 2072 | ! The PFT is absent on the pixel |
|---|
| 2073 | gpp_d(:,j) = zero |
|---|
| 2074 | ENDWHERE |
|---|
| 2075 | ENDDO |
|---|
| 2076 | |
|---|
| 2077 | !! 3.4 The first time step of the first day of the month |
|---|
| 2078 | ! implies that the month is over |
|---|
| 2079 | IF ( day == 1 .AND. sec .LT. dt_sechiba ) THEN |
|---|
| 2080 | EndOfMonth=.TRUE. |
|---|
| 2081 | ELSE |
|---|
| 2082 | EndOfMonth=.FALSE. |
|---|
| 2083 | ENDIF |
|---|
| 2084 | |
|---|
| 2085 | |
|---|
| 2086 | !! 4. Calculate variables for dt_stomate (i.e. "daily") |
|---|
| 2087 | |
|---|
| 2088 | ! Note: If dt_days /= 1, then variables 'xx_daily' (eg. half-daily or bi-daily) are by definition |
|---|
| 2089 | ! not expressed on a daily basis. This is not a problem but could be |
|---|
| 2090 | ! confusing |
|---|
| 2091 | |
|---|
| 2092 | !! 4.1. Calculate water stress accounting for hydraulic architecture |
|---|
| 2093 | ! If hydraulic architecture is used, humrel_daily (water stress) for use in stomate is |
|---|
| 2094 | ! not determined from humrel as calculated in hydrol.f90, but it is calculated as the |
|---|
| 2095 | ! ratio between a proxy for stressed and unstressed ecosystem functioning. |
|---|
| 2096 | ! Nightvalues are exclude. On the first day of the simulation (no biomass) |
|---|
| 2097 | ! the stressed and unstressed proxies are probably both equal to the initilazed value (=zero, |
|---|
| 2098 | ! initialized in sechiba.f90), to avoid numerical issues in this case we set humrel_daily |
|---|
| 2099 | ! to 1. If hydraulic architecture is not used humrel_daily is calculated from humrel as |
|---|
| 2100 | ! determined in hydrol. |
|---|
| 2101 | IF (ok_hydrol_arch) THEN |
|---|
| 2102 | ! Accumulate the half hourly values into a daily value. Accumulate the |
|---|
| 2103 | ! stressed and unstressed proxy first and then take the average. We |
|---|
| 2104 | ! first accumulate and then take the ratio because that way we better |
|---|
| 2105 | ! account for the night time values. If we do it in the other order |
|---|
| 2106 | ! we need to assign a value to the ratio during the night. Whether we |
|---|
| 2107 | ! take zero or one, this will bias our waterstress number because |
|---|
| 2108 | ! the number of half hours during the night is different for the |
|---|
| 2109 | ! different pixels. So although water stress could be higher in the |
|---|
| 2110 | ! south than in the north. During the growing season, day are shorter |
|---|
| 2111 | ! in the south so if we set the ratio to 1 during the night, our daily |
|---|
| 2112 | ! water stress in the south may be less than in the north because we |
|---|
| 2113 | ! more 1's in the daily time series. |
|---|
| 2114 | |
|---|
| 2115 | ! The order of the calculation may depend on the proxy used. For example, |
|---|
| 2116 | ! Accumulate transpir_supply and transpir first and then calculate ratio |
|---|
| 2117 | ! By doing this water stress is buffered (it is assumed that if |
|---|
| 2118 | ! ::transpir_supply is larger than ::transpir at one timestep it can buffer |
|---|
| 2119 | ! potential water stress in the next timestep. In reality this is not the |
|---|
| 2120 | ! case: transpir_supply is a potential value not a realized one. |
|---|
| 2121 | DO ipts = 1,kjpindex |
|---|
| 2122 | |
|---|
| 2123 | ! The cosine of the zenith angle, is used to |
|---|
| 2124 | ! identify night values. |
|---|
| 2125 | IF (coszang(ipts) .LT. min_stomate) THEN |
|---|
| 2126 | |
|---|
| 2127 | ! Redundant because the value will never be used |
|---|
| 2128 | ! For all pixels |
|---|
| 2129 | stressed(ipts,:) = zero |
|---|
| 2130 | unstressed(ipts,:) = zero |
|---|
| 2131 | |
|---|
| 2132 | ! For PFT1 under LCC |
|---|
| 2133 | ! vir_stressed = zero |
|---|
| 2134 | ! vir_unstressed = zero |
|---|
| 2135 | |
|---|
| 2136 | ELSE |
|---|
| 2137 | |
|---|
| 2138 | ! No vegetation present so ecosystem functioning |
|---|
| 2139 | ! was not defined |
|---|
| 2140 | WHERE (veget_cov_max(ipts,:) .LT. min_stomate) |
|---|
| 2141 | |
|---|
| 2142 | ! To avoid uninitialized values |
|---|
| 2143 | stressed(ipts,:) = zero |
|---|
| 2144 | unstressed(ipts,:) = zero |
|---|
| 2145 | |
|---|
| 2146 | ! Update the values to avoid uninitialized fields |
|---|
| 2147 | ! in ::stressed_daily and ::unstressed_daily |
|---|
| 2148 | stressed_daily(ipts,:) = stressed_daily(ipts,:) + & |
|---|
| 2149 | stressed(ipts,:) |
|---|
| 2150 | unstressed_daily(ipts,:) = unstressed_daily(ipts,:) + & |
|---|
| 2151 | unstressed(ipts,:) |
|---|
| 2152 | daylight(ipts,:) = daylight(ipts,:) + 1 |
|---|
| 2153 | |
|---|
| 2154 | ! For PFT1 under LCC |
|---|
| 2155 | ! vir_stressed = zero |
|---|
| 2156 | ! vir_unstressed = zero |
|---|
| 2157 | |
|---|
| 2158 | ELSEWHERE |
|---|
| 2159 | |
|---|
| 2160 | ! The pixel and pft contain vegetation and their |
|---|
| 2161 | ! is daylight, store values to calculate the stress |
|---|
| 2162 | stressed_daily(ipts,:) = stressed_daily(ipts,:) + & |
|---|
| 2163 | stressed(ipts,:) |
|---|
| 2164 | unstressed_daily(ipts,:) = unstressed_daily(ipts,:) + & |
|---|
| 2165 | unstressed(ipts,:) |
|---|
| 2166 | daylight(ipts,:) = daylight(ipts,:) + 1 |
|---|
| 2167 | |
|---|
| 2168 | |
|---|
| 2169 | ! For PFT1 under LCC |
|---|
| 2170 | ! vir_stressed = zero |
|---|
| 2171 | ! vir_unstressed = zero |
|---|
| 2172 | |
|---|
| 2173 | ENDWHERE |
|---|
| 2174 | |
|---|
| 2175 | ENDIF |
|---|
| 2176 | |
|---|
| 2177 | ENDDO |
|---|
| 2178 | |
|---|
| 2179 | |
|---|
| 2180 | ! Calculate the mean waterstress value at the end of each day |
|---|
| 2181 | IF (do_slow) THEN |
|---|
| 2182 | |
|---|
| 2183 | ! Calculate the ratio |
|---|
| 2184 | WHERE (unstressed_daily(:,:) .LT. min_stomate & |
|---|
| 2185 | .OR. stressed_daily(:,:) .LT. min_stomate) |
|---|
| 2186 | |
|---|
| 2187 | ! No ecosystem function thus no data, we assume |
|---|
| 2188 | ! there is no water stress |
|---|
| 2189 | humrel_daily(:,:) = un |
|---|
| 2190 | |
|---|
| 2191 | ELSEWHERE |
|---|
| 2192 | |
|---|
| 2193 | ! Calculate water stress. If we first calculate |
|---|
| 2194 | ! the daily sum and then the ratio there is no need |
|---|
| 2195 | ! to divide by daylight. If we accumulate ratios |
|---|
| 2196 | ! we will have to divide by daylight. This is |
|---|
| 2197 | ! arbitrary. To do this properly we should calculate |
|---|
| 2198 | ! the turgor in the cells and calculate growth |
|---|
| 2199 | ! based on that see i.e. Fatichi et al 2013, New |
|---|
| 2200 | ! Phytologist. We use a simple numerical construct |
|---|
| 2201 | ! (the sqrt of the ratio) to overcome that complexity. |
|---|
| 2202 | humrel_daily(:,:) = stressed_daily(:,:) / & |
|---|
| 2203 | unstressed_daily(:,:) |
|---|
| 2204 | |
|---|
| 2205 | ENDWHERE |
|---|
| 2206 | |
|---|
| 2207 | !+++CHECK+++ |
|---|
| 2208 | ! This needs to be done outside the where loop so that |
|---|
| 2209 | ! all PFTs have vir_humrel_daily set. |
|---|
| 2210 | ! vir_humrel_daily will be needed when accounting for the |
|---|
| 2211 | ! water columns following a land cover change. It is partly |
|---|
| 2212 | ! calculated in sechiba hydrol_arch but it is not passed all |
|---|
| 2213 | ! the way to here. Check and fix. For the moment LCC does |
|---|
| 2214 | ! not account for the water columns so ::humrel_daily and |
|---|
| 2215 | ! ::vir_humrel_daily are equal to each other |
|---|
| 2216 | vir_humrel_daily(:,:) = humrel_daily(:,:) |
|---|
| 2217 | ! We have a problem. wstress is no longer calculated in a way |
|---|
| 2218 | ! that allows for a virtual quantity, since it's the ratio of the |
|---|
| 2219 | ! stressed and unstressed GPPs...which cannot be calculated if there |
|---|
| 2220 | ! is no vegetation. Therefore, for any PFTs which are not |
|---|
| 2221 | ! currently present we give the daily virtual waterstress to be |
|---|
| 2222 | ! equal to one. |
|---|
| 2223 | !+++++++++++ |
|---|
| 2224 | !---TEMP--- |
|---|
| 2225 | IF(printlev_loc>=4)THEN |
|---|
| 2226 | DO ipts=1,kjpindex |
|---|
| 2227 | DO ivm=1,nvm |
|---|
| 2228 | IF( humrel_daily(ipts,ivm) .lt. 1.) THEN |
|---|
| 2229 | WRITE(numout,*)'ivm,stressed_daily,unstressed_daily,diff,humrel_daily' |
|---|
| 2230 | |
|---|
| 2231 | WRITE(numout,*) ivm, stressed_daily(ipts,ivm),unstressed_daily(ipts,ivm),& |
|---|
| 2232 | & stressed_daily(ipts,ivm)-unstressed_daily(ipts,ivm), humrel_daily(ipts,ivm) |
|---|
| 2233 | ENDIF |
|---|
| 2234 | ENDDO |
|---|
| 2235 | ENDDO |
|---|
| 2236 | ENDIF |
|---|
| 2237 | !---------- |
|---|
| 2238 | ! Set to zero to start accumulating for the next day |
|---|
| 2239 | stressed_daily(:,:) = zero |
|---|
| 2240 | unstressed_daily(:,:) = zero |
|---|
| 2241 | daylight(:,:) = zero |
|---|
| 2242 | |
|---|
| 2243 | ELSE |
|---|
| 2244 | |
|---|
| 2245 | ! Set to a large value so that it is easy to detect problems |
|---|
| 2246 | ! This value should never be used. It should only be passed |
|---|
| 2247 | ! to other routine at the end of the day when do_slow is false |
|---|
| 2248 | humrel_daily(:,:) = large_value |
|---|
| 2249 | vir_humrel_daily(:,:) = large_value |
|---|
| 2250 | |
|---|
| 2251 | ENDIF !(do_slow) |
|---|
| 2252 | |
|---|
| 2253 | ELSE |
|---|
| 2254 | ! No hydrological architecture |
|---|
| 2255 | CALL stomate_accu (do_slow, humrel, humrel_daily) |
|---|
| 2256 | |
|---|
| 2257 | ! The variable ::vir_humrel_arch was not defined for this case |
|---|
| 2258 | ! Assume no stress |
|---|
| 2259 | vir_humrel_daily = un |
|---|
| 2260 | |
|---|
| 2261 | ENDIF ! (ok_hydrol_arch) |
|---|
| 2262 | |
|---|
| 2263 | |
|---|
| 2264 | ! Here we add some calculations for daily max/min for windthrow module |
|---|
| 2265 | IF (ok_windthrow) THEN |
|---|
| 2266 | |
|---|
| 2267 | ! Accumulate the half hourly values into a daily value. Accumulate the |
|---|
| 2268 | ! daily wind speed first and then take the average. grnd_80 is the index |
|---|
| 2269 | ! of ngrnd closest to 80 cm depth. |
|---|
| 2270 | wind_speed_actual(:) = SQRT (u(:) * u(:) + v(:) * v(:)) |
|---|
| 2271 | wind_max_daily(:) = MAX (wind_speed_actual(:),wind_max_daily(:) ) |
|---|
| 2272 | soil_max_daily(:) = MAX (stempdiag(:,grnd_80),soil_max_daily(:) ) |
|---|
| 2273 | |
|---|
| 2274 | IF (do_slow) THEN |
|---|
| 2275 | |
|---|
| 2276 | ! wind_speed_daily/soil_temp_daily will be passed to the wind_damage |
|---|
| 2277 | ! module. wind_max_daily/soil_max_daily reset to zero so they can be |
|---|
| 2278 | ! used again for the next day |
|---|
| 2279 | wind_speed_daily(:) = wind_max_daily(:) |
|---|
| 2280 | wind_max_daily(:) = zero |
|---|
| 2281 | soil_temp_daily(:) = soil_max_daily(:) |
|---|
| 2282 | soil_max_daily(:) = zero |
|---|
| 2283 | |
|---|
| 2284 | ENDIF |
|---|
| 2285 | |
|---|
| 2286 | ENDIF |
|---|
| 2287 | |
|---|
| 2288 | |
|---|
| 2289 | ! Debug |
|---|
| 2290 | IF (printlev_loc>=4) THEN |
|---|
| 2291 | IF(do_slow) THEN |
|---|
| 2292 | WRITE(numout,*) 'CHECK: humrel_daily after stomate_accu',& |
|---|
| 2293 | humrel_daily(:,:) |
|---|
| 2294 | WRITE(numout,*) 'CHECK: vir_humrel_daily after stomate_accu',& |
|---|
| 2295 | vir_humrel_daily(:,:) |
|---|
| 2296 | ENDIF |
|---|
| 2297 | ENDIF |
|---|
| 2298 | !- |
|---|
| 2299 | |
|---|
| 2300 | !! Calculate the light that reaches each canopy layer |
|---|
| 2301 | ! Compute seasonal daytime transmitted light to canopy levels |
|---|
| 2302 | ! This quantity is used to calculate how much recruitment can occur |
|---|
| 2303 | ! underneath the canopy. Recruitment is simulated in stomate_prescribe.f90 |
|---|
| 2304 | light_tran_to_level(:,:,:) = un |
|---|
| 2305 | |
|---|
| 2306 | DO ipts=1,kjpindex |
|---|
| 2307 | |
|---|
| 2308 | DO ivm=1,nvm |
|---|
| 2309 | |
|---|
| 2310 | ! If we are at a daytime time step and there is growth (gpp>0) then |
|---|
| 2311 | ! accumulate instantaneous transmitted light to each canopy level |
|---|
| 2312 | IF ( coszang(ipts) .GT. min_stomate .AND. & |
|---|
| 2313 | gpp(ipts,ivm) .GT. min_stomate ) THEN |
|---|
| 2314 | |
|---|
| 2315 | daylight_count(ipts,ivm) = daylight_count(ipts,ivm) + 1 |
|---|
| 2316 | |
|---|
| 2317 | DO ilev = nlevels_tot-1,1,-1 |
|---|
| 2318 | |
|---|
| 2319 | light_tran_to_level(ipts,ivm,ilev) = & |
|---|
| 2320 | light_tran_to_level(ipts,ivm,ilev+1) * & |
|---|
| 2321 | Isotrop_Tran_Tot_p(ipts,ivm,ilev+1) |
|---|
| 2322 | |
|---|
| 2323 | ENDDO |
|---|
| 2324 | |
|---|
| 2325 | ! Accumulate over the growing season |
|---|
| 2326 | light_tran_to_level_season(ipts,ivm,:) = & |
|---|
| 2327 | light_tran_to_level_season(ipts,ivm,:) + & |
|---|
| 2328 | light_tran_to_level(ipts,ivm,:) |
|---|
| 2329 | |
|---|
| 2330 | ! Debug |
|---|
| 2331 | IF (printlev_loc.GT.4)THEN |
|---|
| 2332 | WRITE(numout,*) 'It is daytime and growth occurs, '& |
|---|
| 2333 | &'daylight_count(ipts,ivm)= ', daylight_count(ipts,ivm) |
|---|
| 2334 | WRITE(numout,*) 'gpp(ipts,ivm)= ', gpp(ipts,ivm) |
|---|
| 2335 | WRITE(numout,*) 'fine resolution Absolute transmitted light '& |
|---|
| 2336 | &'to each level (ivm,ipts,nlevels_tot) ',& |
|---|
| 2337 | ivm,ipts,nlevels_tot |
|---|
| 2338 | DO ilev = nlevels_tot,1,-1 |
|---|
| 2339 | WRITE(numout,*) ilev,light_tran_to_level(ipts,ivm,ilev),& |
|---|
| 2340 | Isotrop_Tran_Tot_p(ipts,ivm,ilev) |
|---|
| 2341 | ENDDO |
|---|
| 2342 | ENDIF |
|---|
| 2343 | !- |
|---|
| 2344 | |
|---|
| 2345 | ENDIF ! daytime and growing season |
|---|
| 2346 | |
|---|
| 2347 | ENDDO |
|---|
| 2348 | |
|---|
| 2349 | ! Calculate average transmitted light at the end of the year |
|---|
| 2350 | IF (EndOfYear) THEN |
|---|
| 2351 | |
|---|
| 2352 | ! Calculate average transmitted light at the end of the year |
|---|
| 2353 | ! Only account for days during the growing season |
|---|
| 2354 | DO ivm=2,nvm |
|---|
| 2355 | |
|---|
| 2356 | IF (daylight_count(ipts,ivm) .GT. zero) THEN |
|---|
| 2357 | |
|---|
| 2358 | DO ilev=1,nlevels_tot |
|---|
| 2359 | |
|---|
| 2360 | light_tran_to_level_season(ipts,ivm,ilev) = & |
|---|
| 2361 | light_tran_to_level_season(ipts,ivm,ilev) / & |
|---|
| 2362 | daylight_count(ipts,ivm) |
|---|
| 2363 | |
|---|
| 2364 | ENDDO |
|---|
| 2365 | |
|---|
| 2366 | ELSE |
|---|
| 2367 | |
|---|
| 2368 | ! There was no GPP during this year in this PFT. Most |
|---|
| 2369 | ! likely this implies that there is no vegetation. So, |
|---|
| 2370 | ! all the light is transmitted to the ground level. |
|---|
| 2371 | ! The fraction of transmitted light is thus set to 1. |
|---|
| 2372 | light_tran_to_level_season(ipts,ivm,:) = un |
|---|
| 2373 | |
|---|
| 2374 | ENDIF |
|---|
| 2375 | |
|---|
| 2376 | ! Debug |
|---|
| 2377 | IF(printlev_loc>=4)THEN |
|---|
| 2378 | WRITE(numout,*) 'DEBUG in stomate.f90 it is end of the ', & |
|---|
| 2379 | 'year in stomate.f90' |
|---|
| 2380 | WRITE(numout,*) 'daylight_count to divide by here is, ', & |
|---|
| 2381 | daylight_count(ipts,:) |
|---|
| 2382 | WRITE(numout,*) 'transmitted light, ',& |
|---|
| 2383 | light_tran_to_level_season(ipts,ivm,1),& |
|---|
| 2384 | light_tran_to_level_season(ipts,ivm,10) |
|---|
| 2385 | ENDIF |
|---|
| 2386 | !- |
|---|
| 2387 | ENDDO |
|---|
| 2388 | ! Reset the counter for the next year |
|---|
| 2389 | daylight_count(:,:)=zero |
|---|
| 2390 | |
|---|
| 2391 | ENDIF ! EndOfYear |
|---|
| 2392 | |
|---|
| 2393 | ENDDO ! ipts=1,kjpindex |
|---|
| 2394 | |
|---|
| 2395 | ! Debug |
|---|
| 2396 | IF(printlev_loc>=5)THEN |
|---|
| 2397 | IF (EndOfYear) THEN |
|---|
| 2398 | DO ipts=1,kjpindex |
|---|
| 2399 | DO ivm=1,nvm |
|---|
| 2400 | WRITE(numout,*) 'Average absolute transmitted light & |
|---|
| 2401 | & during the growing season to each canopy & |
|---|
| 2402 | & level in stomate.f90 ', & |
|---|
| 2403 | ivm,ipts,nlevels_tot |
|---|
| 2404 | DO ilev = nlevels_tot,1,-1 |
|---|
| 2405 | WRITE(numout,*) ilev,light_tran_to_level_season(ipts,ivm,ilev) |
|---|
| 2406 | ENDDO |
|---|
| 2407 | ENDDO |
|---|
| 2408 | ENDDO |
|---|
| 2409 | ENDIF |
|---|
| 2410 | ENDIF |
|---|
| 2411 | !- |
|---|
| 2412 | ! Write trans_to_light to output file. It is calculated at each subdaily |
|---|
| 2413 | ! timestep |
|---|
| 2414 | CALL xios_orchidee_send_field("LIGHT_TRAN_TO_LEVEL",light_tran_to_level(:,:,:)) |
|---|
| 2415 | |
|---|
| 2416 | !! 4.1 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 2417 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 2418 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 2419 | |
|---|
| 2420 | CALL stomate_accu (do_slow, litterhumdiag, litterhum_daily) |
|---|
| 2421 | CALL stomate_accu (do_slow, t2m, t2m_daily) |
|---|
| 2422 | CALL stomate_accu (do_slow, temp_sol, tsurf_daily) |
|---|
| 2423 | CALL stomate_accu (do_slow, stempdiag, tsoil_daily) |
|---|
| 2424 | CALL stomate_accu (do_slow, shumdiag, soilhum_daily) |
|---|
| 2425 | CALL stomate_accu (do_slow, precip, precip_daily) |
|---|
| 2426 | CALL stomate_accu (do_slow, gpp_d, gpp_daily) |
|---|
| 2427 | CALL stomate_accu (do_slow, drainage_pft, drainage_daily) |
|---|
| 2428 | |
|---|
| 2429 | !! 4.2 Daily minimum temperature |
|---|
| 2430 | t2m_min_daily(:) = MIN( t2m(:), t2m_min_daily(:) ) |
|---|
| 2431 | |
|---|
| 2432 | !! 4.3 Calculate maintenance respiration |
|---|
| 2433 | ! Note: lai is passed as output argument to overcome previous problems with |
|---|
| 2434 | ! natural and agricultural vegetation types. |
|---|
| 2435 | CALL maint_respiration (kjpindex, dt_sechiba, t2m, t2m_longterm, & |
|---|
| 2436 | stempdiag, gpp, gpp_week, lab_fac, & |
|---|
| 2437 | veget_cov_max, rprof, resp_maint_part_radia, & |
|---|
| 2438 | circ_class_n, circ_class_biomass) |
|---|
| 2439 | |
|---|
| 2440 | ! Aggregate maintenance respiration across the different plant parts |
|---|
| 2441 | resp_maint_radia(:,:) = zero |
|---|
| 2442 | DO j=2,nvm |
|---|
| 2443 | DO k= 1, nparts |
|---|
| 2444 | resp_maint_radia(:,j) = resp_maint_radia(:,j) & |
|---|
| 2445 | & + resp_maint_part_radia(:,j,k) |
|---|
| 2446 | ENDDO |
|---|
| 2447 | ENDDO |
|---|
| 2448 | |
|---|
| 2449 | ! Maintenance respiration separated by plant parts |
|---|
| 2450 | resp_maint_part(:,:,:) = resp_maint_part(:,:,:) & |
|---|
| 2451 | & + resp_maint_part_radia(:,:,:) |
|---|
| 2452 | |
|---|
| 2453 | !! 4.4 Initialize check for mass balance closure |
|---|
| 2454 | ! Mass balance closure for the half-hourly (dt_sechiba) |
|---|
| 2455 | ! processes in stomate.f90. This test is always performed. |
|---|
| 2456 | ! If err_act.EQ.1 then the value of the mass balance error |
|---|
| 2457 | ! -if any- is written to the history file. |
|---|
| 2458 | !!$ printlev_loc=get_printlev('stomate') |
|---|
| 2459 | check_intern(:,:,:,:) = zero |
|---|
| 2460 | pool_start(:,:,:) = zero |
|---|
| 2461 | DO iele = 1,nelements |
|---|
| 2462 | |
|---|
| 2463 | ! atm_to_bm has as intent inout, the variable |
|---|
| 2464 | ! accumulates carbon over the course of a day. |
|---|
| 2465 | ! Use the difference between the start and end of |
|---|
| 2466 | ! this routine to account for the change in |
|---|
| 2467 | ! atm_to_bm |
|---|
| 2468 | check_intern(:,:,iatm2land,iele) = - un * & |
|---|
| 2469 | atm_to_bm(:,:,iele) * veget_cov_max(:,:) * dt_sechiba |
|---|
| 2470 | |
|---|
| 2471 | ! Biomass pool (gC m-2)*(m2 m-2) |
|---|
| 2472 | DO ipar = 1,nparts |
|---|
| 2473 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2474 | (turnover_daily(:,:,ipar,iele) + & |
|---|
| 2475 | bm_to_litter(:,:,ipar,iele)) * veget_cov_max(:,:) / & |
|---|
| 2476 | one_day * dt_sechiba |
|---|
| 2477 | ENDDO |
|---|
| 2478 | |
|---|
| 2479 | ! Litter pool (gC m-2)*(m2 m-2) |
|---|
| 2480 | DO ilitt = 1,nlitt |
|---|
| 2481 | DO ilev = 1,nlevs |
|---|
| 2482 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2483 | litter(:,ilitt,:,ilev,iele) * veget_cov_max(:,:) |
|---|
| 2484 | ENDDO |
|---|
| 2485 | ENDDO |
|---|
| 2486 | |
|---|
| 2487 | ! Soil carbon (gC m-2)*(m2 m-2) |
|---|
| 2488 | DO icarb = 1,ncarb |
|---|
| 2489 | pool_start(:,:,iele) = pool_start(:,:,iele) + & |
|---|
| 2490 | som(:,icarb,:,iele) * veget_cov_max(:,:) |
|---|
| 2491 | ENDDO |
|---|
| 2492 | |
|---|
| 2493 | ENDDO ! # nelements |
|---|
| 2494 | |
|---|
| 2495 | ! Account for the N-pool in the soil |
|---|
| 2496 | DO inspec = 1,nnspec |
|---|
| 2497 | pool_start(:,:,initrogen) = pool_start(:,:,initrogen) + & |
|---|
| 2498 | soil_n_min(:,:,inspec) * veget_cov_max(:,:) |
|---|
| 2499 | ENDDO |
|---|
| 2500 | |
|---|
| 2501 | ! Initialize check for area conservation |
|---|
| 2502 | veget_cov_max_begin(:,:) = veget_cov_max(:,:) |
|---|
| 2503 | |
|---|
| 2504 | !! 4.5 Litter dynamics and litter heterothropic respiration |
|---|
| 2505 | ! Including: litter update, lignin content, PFT parts, litter decay, |
|---|
| 2506 | ! litter heterotrophic respiration, dead leaf soil cover. |
|---|
| 2507 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 2508 | n_mineralisation(:,:) = zero |
|---|
| 2509 | turnover_littercalc(:,:,:,:) = turnover_daily(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2510 | bm_to_littercalc(:,:,:,:) = bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 2511 | |
|---|
| 2512 | CALL littercalc (kjpindex, & |
|---|
| 2513 | turnover_littercalc, bm_to_littercalc, & |
|---|
| 2514 | veget_cov_max, temp_sol, stempdiag, shumdiag, litterhumdiag, som, & |
|---|
| 2515 | clay, silt, soil_n_min, litter, dead_leaves, lignin_struc, & |
|---|
| 2516 | lignin_wood, n_mineralisation, deadleaf_cover, resp_hetero_litter, & |
|---|
| 2517 | som_input_inst, control_temp_inst, control_moist_inst, n_fungivores, & |
|---|
| 2518 | matrixA, vectorB, CN_target, CN_som_litter_longterm, tau_CN_longterm, & |
|---|
| 2519 | ld_redistribute, circ_class_biomass, circ_class_n) |
|---|
| 2520 | |
|---|
| 2521 | !--- TEMP---! |
|---|
| 2522 | IF(printlev_loc>=4) THEN |
|---|
| 2523 | WRITE(numout,*) 'between litter and soil ' |
|---|
| 2524 | WRITE(numout,*) 'n_mineralisation ', n_mineralisation(:,:) |
|---|
| 2525 | WRITE(numout,*) 'drainage_pft ', drainage_pft(:,:) |
|---|
| 2526 | WRITE(numout,*) 'control_temp_inst, ',control_temp_inst(:,:) |
|---|
| 2527 | WRITE(numout,*) 'control_moist_inst, ',control_moist_inst(:,:) |
|---|
| 2528 | ENDIF |
|---|
| 2529 | |
|---|
| 2530 | !! 4.6 Soil carbon dynamics and soil heterotrophic respiration |
|---|
| 2531 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 2532 | CALL som_dynamics (kjpindex, clay, silt, veget_cov_max, & |
|---|
| 2533 | som_input_inst, control_temp_inst, control_moist_inst, drainage_pft,& |
|---|
| 2534 | CN_target, som, soil_n_min, resp_hetero_soil, matrixA, & |
|---|
| 2535 | n_mineralisation, CN_som_litter_longterm, tau_CN_longterm) |
|---|
| 2536 | |
|---|
| 2537 | ! Heterothropic soil respiration during time step ::dt_sechiba |
|---|
| 2538 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2539 | IF(printlev_loc >= 4) THEN |
|---|
| 2540 | WRITE(numout,*)'betweem som_dynamics and nitrogen_dynamics' |
|---|
| 2541 | WRITE(numout,*)'n_mineralisation ', n_mineralisation(:,:) |
|---|
| 2542 | WRITE(numout,*)'resp_hetero_soil',resp_hetero_soil(:,:) |
|---|
| 2543 | WRITE(numout,*)'dt_sechiba',dt_sechiba |
|---|
| 2544 | WRITE(numout,*)'one_day',one_day |
|---|
| 2545 | ENDIF |
|---|
| 2546 | |
|---|
| 2547 | ! Heterothropic litter respiration during time step ::dt_sechiba |
|---|
| 2548 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2549 | resp_hetero_litter(:,:) = resp_hetero_litter(:,:) * dt_sechiba/one_day |
|---|
| 2550 | |
|---|
| 2551 | !! resp_hetero_soil(:,1)=zero |
|---|
| 2552 | resp_hetero_soil(:,:) = resp_hetero_soil(:,:) * dt_sechiba/one_day |
|---|
| 2553 | |
|---|
| 2554 | ! Total heterothrophic respiration during time step ::dt_sechiba |
|---|
| 2555 | ! @tex $(gC m^{-2})$ @endtex |
|---|
| 2556 | resp_hetero_radia(:,:) = resp_hetero_litter(:,:) + resp_hetero_soil(:,:) |
|---|
| 2557 | resp_hetero_d(:,:) = resp_hetero_d(:,:) + resp_hetero_radia(:,:) |
|---|
| 2558 | |
|---|
| 2559 | ! Sum heterotrophic and autotrophic respiration in soil |
|---|
| 2560 | resp_total_soil(:,:) = resp_hetero_radia(:,:) + & |
|---|
| 2561 | resp_maint_part_radia(:,:,isapbelow) + resp_maint_part_radia(:,:,iroot) |
|---|
| 2562 | |
|---|
| 2563 | IF(ok_ncycle) THEN |
|---|
| 2564 | |
|---|
| 2565 | CALL nitrogen_dynamics(kjpindex, clay, MAX(zero, un - silt - clay), & |
|---|
| 2566 | stempdiag-tp_00, tmc_pft, drainage_pft, swc_pft, veget_cov_max, & |
|---|
| 2567 | resp_total_soil, som, & |
|---|
| 2568 | n_input, soil_ph, n_mineralisation, pb, n_fungivores, & |
|---|
| 2569 | plant_n_uptake, bulk, soil_n_min, p_O2, bact, atm_to_bm, & |
|---|
| 2570 | leaching, emission, input_dt_sechiba, ld_redistribute, circ_class_biomass, & |
|---|
| 2571 | circ_class_n) |
|---|
| 2572 | |
|---|
| 2573 | ENDIF |
|---|
| 2574 | |
|---|
| 2575 | ! Accumulate over the day |
|---|
| 2576 | plant_n_uptake_daily(:,:,:) = plant_n_uptake_daily(:,:,:) + plant_n_uptake(:,:,:) |
|---|
| 2577 | n_mineralisation_d(:,:) = n_mineralisation_d(:,:) + n_mineralisation(:,:) |
|---|
| 2578 | |
|---|
| 2579 | !! 4.7 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 2580 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 2581 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 2582 | CALL stomate_accu (do_slow, control_moist_inst, control_moist_daily) |
|---|
| 2583 | CALL stomate_accu (do_slow, control_temp_inst, control_temp_daily) |
|---|
| 2584 | CALL stomate_accu (do_slow, som_input_inst, som_input_daily) |
|---|
| 2585 | |
|---|
| 2586 | !! 4.8 Check numerical consistency of this routine |
|---|
| 2587 | ! These checks only check the processes that happen |
|---|
| 2588 | ! every half-hour (dt_radia). This test is always |
|---|
| 2589 | ! performed. If err_act.EQ.1 then the value of the |
|---|
| 2590 | ! mass balance error -if any- is written to the |
|---|
| 2591 | ! history file. |
|---|
| 2592 | !!$ printlev_loc=get_printlev('stomate') |
|---|
| 2593 | |
|---|
| 2594 | ! Check surface area |
|---|
| 2595 | CALL check_surface_area("stomate dt_sechiba", kjpindex, veget_cov_max_begin, & |
|---|
| 2596 | veget_cov_max,'pixel') |
|---|
| 2597 | |
|---|
| 2598 | ! 4.8.2 Mass balance closure (dt_radia) |
|---|
| 2599 | ! Calculate final carbon and nitrogen pools |
|---|
| 2600 | pool_end(:,:,:) = zero |
|---|
| 2601 | DO iele = 1,nelements |
|---|
| 2602 | |
|---|
| 2603 | ! Litter pool |
|---|
| 2604 | DO ilitt = 1,nlitt |
|---|
| 2605 | DO ilev = 1,nlevs |
|---|
| 2606 | pool_end(:,:,iele) = pool_end(:,:,iele) + & |
|---|
| 2607 | litter(:,ilitt,:,ilev,iele) * veget_cov_max(:,:) |
|---|
| 2608 | ENDDO |
|---|
| 2609 | ENDDO |
|---|
| 2610 | |
|---|
| 2611 | ! Soil carbon and nitrogen |
|---|
| 2612 | DO icarb = 1,ncarb |
|---|
| 2613 | pool_end(:,:,iele) = pool_end(:,:,iele) + & |
|---|
| 2614 | som(:,icarb,:,iele) * veget_cov_max(:,:) |
|---|
| 2615 | ENDDO |
|---|
| 2616 | |
|---|
| 2617 | ENDDO ! # nelements |
|---|
| 2618 | |
|---|
| 2619 | ! The nitrogen pool in the soil may have changed |
|---|
| 2620 | DO inspec = 1,nnspec |
|---|
| 2621 | pool_end(:,:,initrogen) = pool_end(:,:,initrogen) + & |
|---|
| 2622 | soil_n_min(:,:,inspec) * veget_cov_max(:,:) |
|---|
| 2623 | ENDDO |
|---|
| 2624 | |
|---|
| 2625 | DO ivm = 1,nvm |
|---|
| 2626 | pool_end(:,ivm,initrogen) = pool_end(:,ivm,initrogen) + & |
|---|
| 2627 | n_fungivores(:,ivm) * veget_cov_max(:,ivm) |
|---|
| 2628 | ENDDO |
|---|
| 2629 | |
|---|
| 2630 | ! Calculate mass balance |
|---|
| 2631 | ! Specific processes |
|---|
| 2632 | check_intern(:,:,iland2atm,icarbon) = -un * (resp_hetero_litter(:,:) + & |
|---|
| 2633 | resp_hetero_soil(:,:)) * veget_cov_max(:,:) |
|---|
| 2634 | |
|---|
| 2635 | DO ininput = 1,ninput |
|---|
| 2636 | check_intern(:,:,iatm2land,initrogen) = & |
|---|
| 2637 | check_intern(:,:,iatm2land,initrogen) + & |
|---|
| 2638 | input_dt_sechiba(:,:,ininput) * veget_cov_max(:,:) |
|---|
| 2639 | ENDDO |
|---|
| 2640 | |
|---|
| 2641 | DO inspec= 1, nnspec |
|---|
| 2642 | check_intern(:,:,iland2atm,initrogen) = & |
|---|
| 2643 | check_intern(:,:,iland2atm,initrogen) & |
|---|
| 2644 | -un * (emission(:,:,inspec) * veget_cov_max(:,:)) |
|---|
| 2645 | ENDDO |
|---|
| 2646 | |
|---|
| 2647 | DO inionspec = 1, nionspec |
|---|
| 2648 | check_intern(:,:,ilat2out,initrogen) = & |
|---|
| 2649 | check_intern(:,:,ilat2out,initrogen) & |
|---|
| 2650 | -un * ( plant_n_uptake(:,:,inionspec) + & |
|---|
| 2651 | leaching(:,:,inionspec) ) * veget_cov_max(:,:) |
|---|
| 2652 | ENDDO |
|---|
| 2653 | |
|---|
| 2654 | ! Common processes |
|---|
| 2655 | DO iele = 1,nelements |
|---|
| 2656 | check_intern(:,:,iatm2land,iele) = check_intern(:,:,iatm2land,iele) + & |
|---|
| 2657 | atm_to_bm(:,:,iele) * dt_sechiba * veget_cov_max(:,:) |
|---|
| 2658 | check_intern(:,:,ipoolchange,iele) = & |
|---|
| 2659 | -un * (pool_end(:,:,iele) - pool_start(:,:,iele)) |
|---|
| 2660 | ENDDO |
|---|
| 2661 | |
|---|
| 2662 | closure_intern(:,:,:) = zero |
|---|
| 2663 | DO imbc = 1,nmbcomp |
|---|
| 2664 | DO iele = 1,nelements |
|---|
| 2665 | ! Debug |
|---|
| 2666 | IF (printlev_loc>=4) WRITE(numout,*) & |
|---|
| 2667 | 'check_intern, ivm, imbc, iele, ', imbc, & |
|---|
| 2668 | iele, SUM(check_intern(:,:,imbc,iele),2) |
|---|
| 2669 | !- |
|---|
| 2670 | closure_intern(:,:,iele) = closure_intern(:,:,iele) + & |
|---|
| 2671 | check_intern(:,:,imbc,iele) |
|---|
| 2672 | ENDDO |
|---|
| 2673 | ENDDO |
|---|
| 2674 | |
|---|
| 2675 | CALL check_mass_balance("stomate dt_sechiba", closure_intern, kjpindex, & |
|---|
| 2676 | pool_end, pool_start, veget_cov_max, 'pft') |
|---|
| 2677 | |
|---|
| 2678 | ! Accumulate the mass balance error over the course of the day |
|---|
| 2679 | ! If all is well the mass balance error is zero (.LT. min_stomate) |
|---|
| 2680 | DO iele = 1,nelements |
|---|
| 2681 | mass_balance_closure(:,iele) = mass_balance_closure(:,iele) + & |
|---|
| 2682 | SUM((closure_intern(:,:,iele) * veget_cov_max(:,:)),2) |
|---|
| 2683 | ENDDO |
|---|
| 2684 | |
|---|
| 2685 | !! 5. Daily processes - performed at the end of the day |
|---|
| 2686 | |
|---|
| 2687 | IF (do_slow) THEN |
|---|
| 2688 | |
|---|
| 2689 | !+++CHECK+++ |
|---|
| 2690 | ! No longer needed. lai is no longer passed |
|---|
| 2691 | ! circ_class_biomass and circ_class_n are now the |
|---|
| 2692 | ! prognostic variables. |
|---|
| 2693 | !!$ !! 5.1 Update lai |
|---|
| 2694 | !!$ ! Use lai from stomate |
|---|
| 2695 | !!$ ! ?? check if this is the only time ok_pheno is used?? |
|---|
| 2696 | !!$ ! ?? Looks like it is the only time. But this variables probably is defined |
|---|
| 2697 | !!$ ! in stomate_constants or something, in which case, it is difficult to track. |
|---|
| 2698 | !!$ IF (ok_pheno) THEN |
|---|
| 2699 | !!$ !! 5.1.1 Update LAI |
|---|
| 2700 | !!$ ! Set lai of bare soil to zero |
|---|
| 2701 | !!$ lai(:,ibare_sechiba) = zero |
|---|
| 2702 | !!$ ! lai for all PFTs |
|---|
| 2703 | !!$ DO ipts = 1, kjpindex |
|---|
| 2704 | !!$ DO j = 2, nvm |
|---|
| 2705 | !!$ lai(ipts,j) = cc_to_lai(circ_class_biomass(ipts,j,:,ileaf,icarbon),& |
|---|
| 2706 | !!$ circ_class_n(ipts,j,:),j) |
|---|
| 2707 | !!$ ENDDO |
|---|
| 2708 | !!$ ENDDO |
|---|
| 2709 | !!$ frac_age(:,:,:) = leaf_frac(:,:,:) |
|---|
| 2710 | !!$ ELSE |
|---|
| 2711 | !!$ ! 5.1.2 Use a prescribed lai |
|---|
| 2712 | !!$ ! WARNING: code in setlai is effectively the same as the lines above |
|---|
| 2713 | !!$ ! Update subroutine if LAI should be prescribed. This is a bit an optimistic |
|---|
| 2714 | !!$ ! function. It is rather difficult to force an lai with a dynamic allocation |
|---|
| 2715 | !!$ ! and a dynamic nitrogen cycle. This will quickly result in inconsistencies. |
|---|
| 2716 | !!$ CALL setlai(kjpindex, lai, circ_class_biomass,circ_class_n) |
|---|
| 2717 | !!$ frac_age(:,:,:) = zero |
|---|
| 2718 | !!$ ENDIF |
|---|
| 2719 | !++++++++++++ |
|---|
| 2720 | |
|---|
| 2721 | !! 5.2 Calculate long-term "meteorological" and biological parameters |
|---|
| 2722 | ! mainly in support of calculating phenology. If ::EndOfYear=.TRUE. |
|---|
| 2723 | ! annual values are update (i.e. xx_lastyear). |
|---|
| 2724 | CALL season & |
|---|
| 2725 | & (kjpindex, dt_days, EndOfYear, & |
|---|
| 2726 | & veget_cov, veget_cov_max, & |
|---|
| 2727 | & humrel_daily, t2m_daily, tsoil_daily, soilhum_daily, lalo, & |
|---|
| 2728 | & precip_daily, npp_daily, circ_class_biomass, circ_class_n, & |
|---|
| 2729 | & turnover_daily, gpp_daily, when_growthinit, & |
|---|
| 2730 | & maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 2731 | & minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 2732 | & maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 2733 | & gdd0_lastyear, gdd0_thisyear, & |
|---|
| 2734 | & precip_lastyear, precip_thisyear, & |
|---|
| 2735 | & lm_lastyearmax, lm_thisyearmax, & |
|---|
| 2736 | & maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 2737 | & humrel_month, humrel_week, t2m_longterm, tau_longterm, & |
|---|
| 2738 | & t2m_month, t2m_week, tsoil_month, soilhum_month, & |
|---|
| 2739 | & npp_longterm, turnover_longterm, gpp_week, plant_status, & |
|---|
| 2740 | & gdd_m5_dormance, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 2741 | & time_hum_min, hum_min_dormance, gdd_init_date, & |
|---|
| 2742 | & gdd_from_growthinit, herbivores, & |
|---|
| 2743 | & Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 2744 | & Tmin_spring_time, t2m_min_daily, onset_date, & |
|---|
| 2745 | & cn_leaf_min_season,nstress_season, & |
|---|
| 2746 | & humrel_growingseason,rue_longterm, harvest_area, & |
|---|
| 2747 | & harvest_5y_area) |
|---|
| 2748 | |
|---|
| 2749 | !! 5.4 Waterstress |
|---|
| 2750 | |
|---|
| 2751 | ! The waterstress factor varies between 0.1 and 1 and is calculated |
|---|
| 2752 | ! from ::humrel_growingseason. The latter is only used in the allometric |
|---|
| 2753 | ! allocation and its time integral is determined by tau_sap for trees |
|---|
| 2754 | ! (see constantes_mtc.f90 for tau_sap and see pft_constantes.f90 for |
|---|
| 2755 | ! the definition of tau_hum_growingseason). The time integral for |
|---|
| 2756 | ! grasses and crops is a prescribed constant (see constantes.f90). By |
|---|
| 2757 | ! having ::wstress_fac working on the turnover, water stress is progated |
|---|
| 2758 | ! into LF. |
|---|
| 2759 | ! Because the calculated values for ::wstress_fac are too low for this purpose |
|---|
| 2760 | ! Sonke Zhaele multiply it by two in the N-branch. This approach maintains |
|---|
| 2761 | ! the physiological basis of KF while combining it with a simple |
|---|
| 2762 | ! multiplicative factor for water stress. Clearly after multiplication with |
|---|
| 2763 | ! 2, wstress is closer to 1 and will thus result in a KF values closer to |
|---|
| 2764 | ! the physiologically expected KF. |
|---|
| 2765 | ! In this implementation we take the sqrt (this is done in stomate where |
|---|
| 2766 | ! ::humrel_daily is calculated from ::stressed and ::unstressed. The |
|---|
| 2767 | ! transformation from the ratio between stressed an unstressed gpp into a |
|---|
| 2768 | ! numerical value that is used in the allocation and turnover is arbitrairy. |
|---|
| 2769 | ! A more physiological approach accounting for turgor would be needed to de |
|---|
| 2770 | ! fundamentally better. |
|---|
| 2771 | ! Note that the current implementation allows for the plants to adapt to drought |
|---|
| 2772 | ! by adjusting its allocation. This is a long-term effect and it is long-term |
|---|
| 2773 | ! because ::humrel_growingseason integrates over ::tau_sap. For the moment no |
|---|
| 2774 | ! short term effects to drought are implemented. Short-term effects should be |
|---|
| 2775 | ! implmented on mortality (through loss of turgor, heat stress, carbon starvation). |
|---|
| 2776 | |
|---|
| 2777 | wstress_season(:,1) = zero |
|---|
| 2778 | wstress_month(:,1) = zero |
|---|
| 2779 | !!$ vir_wstress_fac(:,1) = zero |
|---|
| 2780 | |
|---|
| 2781 | DO jv = 2,nvm |
|---|
| 2782 | |
|---|
| 2783 | ! Calculate waterstress |
|---|
| 2784 | ! Water stress used in stomate |
|---|
| 2785 | ! Set wstress to 1-humrel so that the value is consistent with its |
|---|
| 2786 | ! meaning. wstress=0 indicates no stress, wstress=1 indicates stress |
|---|
| 2787 | wstress_season(:,jv) = un - MAX(humrel_growingseason(:,jv), min_water_stress) |
|---|
| 2788 | wstress_month(:,jv) = un - MAX(humrel_month(:,jv), min_water_stress) |
|---|
| 2789 | !!$ vir_wstress_fac(:,jv) = MAX(vir_humrel_growingseason(:,jv), min_water_stress) |
|---|
| 2790 | |
|---|
| 2791 | !+++CHECK+++ |
|---|
| 2792 | ! The reduction of the leaf longevity should probably depend on |
|---|
| 2793 | ! the leaf skin temperature that will become available through |
|---|
| 2794 | ! the multi-layer energy budget. For the moment we don't have |
|---|
| 2795 | ! water stress on the leaves. A long term adaption could be |
|---|
| 2796 | ! through ::sla |
|---|
| 2797 | tau_eff_leaf(:,jv) = tau_leaf(jv) * un |
|---|
| 2798 | |
|---|
| 2799 | ! The reduction of the root longevity depends on the soil moisture |
|---|
| 2800 | ! stress which we believe is reasonably well captured by our |
|---|
| 2801 | ! proxy for wstress. We need to produce more roots to take the water |
|---|
| 2802 | ! from those layers that have water. |
|---|
| 2803 | ! feedback to c-allocation has been switched off |
|---|
| 2804 | tau_eff_root(:,jv) = tau_root(jv) * un |
|---|
| 2805 | |
|---|
| 2806 | ! The reduction of sapwood longevity should depend on the cavitation |
|---|
| 2807 | ! which is calculated in hydrol_architecture. Should be linked |
|---|
| 2808 | ! once the memory of cavitation is calculated |
|---|
| 2809 | tau_eff_sap(:,jv) = tau_sap(jv) * un |
|---|
| 2810 | !+++++++++ |
|---|
| 2811 | |
|---|
| 2812 | ENDDO |
|---|
| 2813 | |
|---|
| 2814 | ! Add to history file |
|---|
| 2815 | CALL histwrite_p (hist_id_stomate, 'WSTRESS_SEASON', itime, & |
|---|
| 2816 | wstress_season(:,:), kjpindex*nvm, horipft_index) |
|---|
| 2817 | CALL histwrite_p (hist_id_stomate, 'WSTRESS_MONTH', itime, & |
|---|
| 2818 | wstress_month(:,:), kjpindex*nvm, horipft_index) |
|---|
| 2819 | CALL xios_orchidee_send_field("WSTRESS_SEASON",wstress_season(:,:)) |
|---|
| 2820 | CALL xios_orchidee_send_field("WSTRESS_MONTH",wstress_month(:,:)) |
|---|
| 2821 | |
|---|
| 2822 | !! 5.3.1 Activate stomate processes |
|---|
| 2823 | ! Activate stomate processes (the complete list of processes depends |
|---|
| 2824 | ! on whether the DGVM is used or not). Processes include: climate constraints |
|---|
| 2825 | ! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 2826 | ! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 2827 | ! all turnover processes, light competition, sapling establishment, lai and |
|---|
| 2828 | ! land cover change. |
|---|
| 2829 | CALL stomate_lpj_vegetation (kjpindex, dt_days, EndOfYear, & |
|---|
| 2830 | & neighbours, resolution, & |
|---|
| 2831 | & herbivores, & |
|---|
| 2832 | & tsurf_daily, tsoil_daily, t2m_daily, t2m_min_daily, & |
|---|
| 2833 | & litterhum_daily, soilhum_daily, & |
|---|
| 2834 | & maxhumrel_lastyear, minhumrel_lastyear, & |
|---|
| 2835 | & gdd0_lastyear, precip_lastyear, & |
|---|
| 2836 | & humrel_month, humrel_week, & |
|---|
| 2837 | & t2m_longterm, t2m_month, t2m_week, & |
|---|
| 2838 | & tsoil_month, soilhum_month, & |
|---|
| 2839 | & gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 2840 | & turnover_longterm, gpp_daily, & |
|---|
| 2841 | & time_hum_min, hum_min_dormance, maxfpc_lastyear, resp_maint_part,& |
|---|
| 2842 | & PFTpresent, age, fireindex, firelitter, & |
|---|
| 2843 | & leaf_age, leaf_frac, adapted, regenerate, & |
|---|
| 2844 | & plant_status, when_growthinit, litter, & |
|---|
| 2845 | & dead_leaves, som, lignin_struc, lignin_wood, & |
|---|
| 2846 | & veget_cov_max, veget_cov, veget_cov_max_new, npp_longterm, lm_lastyearmax, & |
|---|
| 2847 | & veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 2848 | & rprof, npp_daily, turnover_daily, turnover_time,& |
|---|
| 2849 | & control_moist_inst, control_temp_inst, som_input_daily, & |
|---|
| 2850 | & atm_to_bm, co2_fire, & |
|---|
| 2851 | & resp_hetero_d, resp_maint_d, resp_growth_d, & |
|---|
| 2852 | & height, deadleaf_cover, vcmax, nue, & |
|---|
| 2853 | & bm_to_litter,& |
|---|
| 2854 | & prod_s, prod_m, prod_l, flux_s, flux_m, flux_l, & |
|---|
| 2855 | & flux_prod_s, flux_prod_m, flux_prod_l, carb_mass_total, & |
|---|
| 2856 | & fpc_max, MatrixA, MatrixV, VectorB, VectorU, & |
|---|
| 2857 | & Tseason, Tmin_spring_time, onset_date, KF, k_latosa_adapt,& |
|---|
| 2858 | & cn_leaf_min_season, nstress_season, humrel_growingseason, soil_n_min, & |
|---|
| 2859 | & rue_longterm, plant_n_uptake_daily, & |
|---|
| 2860 | & circ_class_n, circ_class_biomass, forest_managed, forest_managed_lastyear, & |
|---|
| 2861 | & tau_eff_leaf, tau_eff_sap, tau_eff_root, & |
|---|
| 2862 | & species_change_map, fm_change_map, lpft_replant, & |
|---|
| 2863 | & age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 2864 | & previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 2865 | & lab_fac, circ_class_dist, store_sum_delta_ba, & |
|---|
| 2866 | & harvest_pool_bound, harvest_pool, harvest_type, harvest_cut, harvest_area, & |
|---|
| 2867 | & lai_per_level, laieff_fit, h_array_out, z_array_out, & |
|---|
| 2868 | & max_height_store, & |
|---|
| 2869 | & wstress_month, wstress_season, st_dist, litter_demand,& |
|---|
| 2870 | & mass_balance_closure, light_tran_to_level_season, p_O2, bact, & |
|---|
| 2871 | & CN_som_litter_longterm, nbp_pool_start,& |
|---|
| 2872 | & wind_speed_daily, soil_temp_daily, harvest_5y_area) |
|---|
| 2873 | |
|---|
| 2874 | ! Write the mass balance error accumulated over the course of day |
|---|
| 2875 | ! to the history file |
|---|
| 2876 | ! If err_act = 3 the model should stop as soon as there is an |
|---|
| 2877 | ! imbalance. Hence, when this block of code is reached it means |
|---|
| 2878 | ! there is no mass balanc error. In case err_act is 1 or 2, the |
|---|
| 2879 | ! model will not be stopped. It is thus possible to end up here |
|---|
| 2880 | ! and to write a mass balance error. |
|---|
| 2881 | DO iele = 1,nelements |
|---|
| 2882 | IF (iele == icarbon) THEN |
|---|
| 2883 | element_str(iele) = '_c' |
|---|
| 2884 | ELSEIF (iele == initrogen) THEN |
|---|
| 2885 | element_str(iele) = '_n' |
|---|
| 2886 | ELSE |
|---|
| 2887 | CALL ipslerr_p(3,'stomate.f90','Define label for iele','','') |
|---|
| 2888 | ENDIF |
|---|
| 2889 | |
|---|
| 2890 | CALL histwrite_p (hist_id_stomate,'MB_CLOSURE'//TRIM(element_str(iele)), itime, & |
|---|
| 2891 | mass_balance_closure(:,iele), kjpindex, horipft_index) |
|---|
| 2892 | CALL xios_orchidee_send_field("MB_CLOSURE"//TRIM(element_str(iele)), & |
|---|
| 2893 | mass_balance_closure(:,iele)) |
|---|
| 2894 | ENDDO |
|---|
| 2895 | |
|---|
| 2896 | !! 5.5.2 Long term adaptation of allocation to water stress |
|---|
| 2897 | ! ::wstress season is calculated as the seasonal mean of the |
|---|
| 2898 | ! ratio between the stressed and unstressed GPP. If the plant |
|---|
| 2899 | ! experiences a short spell of drought, leaves will be killed |
|---|
| 2900 | ! (see stomate_turnover). However, when the drought stress is |
|---|
| 2901 | ! maintained during the season, it is assumed that the plant |
|---|
| 2902 | ! will economise its canopy and therefore adjust its allocation |
|---|
| 2903 | ! factors to grow less leaves. To avoid that the canopy can only |
|---|
| 2904 | ! shrink the plants will try to grow more leaves when they do |
|---|
| 2905 | ! not experience any water stress. Extending the LAI, however, |
|---|
| 2906 | ! increases the chances that the plant will experience drough |
|---|
| 2907 | ! stress in the future. These feedbacks should stabilize the LAI. |
|---|
| 2908 | wstress_adapt(:,:) = zero |
|---|
| 2909 | WHERE (wstress_season(:,:) .LT. 0.01) |
|---|
| 2910 | |
|---|
| 2911 | ! Increase the leaf allocation by 5% over the whole |
|---|
| 2912 | ! year. If there was no water stress during the whole |
|---|
| 2913 | ! year, the following year more C will be allocated |
|---|
| 2914 | ! to the leaves. |
|---|
| 2915 | wstress_adapt(:,:) = 1.05 |
|---|
| 2916 | |
|---|
| 2917 | ELSEWHERE |
|---|
| 2918 | |
|---|
| 2919 | wstress_adapt(:,:) = wstress_season(:,:) |
|---|
| 2920 | |
|---|
| 2921 | ENDWHERE |
|---|
| 2922 | |
|---|
| 2923 | !+++CHECK+++ |
|---|
| 2924 | ! Don't use this adaptation |
|---|
| 2925 | !!$ k_latosa_adapt(:,:) = k_latosa_adapt(:,:) * & |
|---|
| 2926 | !!$ (wstress_adapt(:,:)**(un/365)) |
|---|
| 2927 | !+++++++++++ |
|---|
| 2928 | |
|---|
| 2929 | DO j = 2,nvm |
|---|
| 2930 | |
|---|
| 2931 | WHERE ( k_latosa_adapt(:,j) .GE. k_latosa_max(j) ) |
|---|
| 2932 | |
|---|
| 2933 | k_latosa_adapt(:,j) = k_latosa_max(j) |
|---|
| 2934 | |
|---|
| 2935 | ENDWHERE |
|---|
| 2936 | |
|---|
| 2937 | ENDDO |
|---|
| 2938 | |
|---|
| 2939 | CALL histwrite_p (hist_id_stomate, 'K_LATOSA_ADAPT', itime, & |
|---|
| 2940 | k_latosa_adapt(:,:), kjpindex*nvm, horipft_index) |
|---|
| 2941 | CALL xios_orchidee_send_field("K_LATOSA_ADAPT",k_latosa_adapt) |
|---|
| 2942 | |
|---|
| 2943 | !+++CHECK+++ |
|---|
| 2944 | ! check units and variable names for new lcchange and product use |
|---|
| 2945 | !! 5.3.2 Calculate the total CO2 flux from land use change |
|---|
| 2946 | !fco2_lu(:) = convflux(:) & |
|---|
| 2947 | ! & + flux_prod10(:) & |
|---|
| 2948 | ! & + flux_prod100(:) & |
|---|
| 2949 | ! & + harvest_above(:) |
|---|
| 2950 | ! It is an output variable so we just gave it a value |
|---|
| 2951 | ! when looking at the history files the value zero should |
|---|
| 2952 | ! ring a bell that there is something wrong. |
|---|
| 2953 | !fco2_lu(:) = 0 |
|---|
| 2954 | !+++++++++++ |
|---|
| 2955 | |
|---|
| 2956 | !! 5.4 Calculate veget_max |
|---|
| 2957 | veget_max(:,:) = zero |
|---|
| 2958 | DO j = 1, nvm |
|---|
| 2959 | veget_max(:,j) = veget_max(:,j) + & |
|---|
| 2960 | & veget_cov_max(:,j) * ( 1.-totfrac_nobio(:) ) |
|---|
| 2961 | ENDDO |
|---|
| 2962 | |
|---|
| 2963 | !! 5.5 Photosynthesis parameters |
|---|
| 2964 | assim_param(:,:,ivcmax) = zero |
|---|
| 2965 | assim_param(:,:,inue) = zero |
|---|
| 2966 | assim_param(:,:,ileafn) = zero |
|---|
| 2967 | DO j = 2,nvm |
|---|
| 2968 | assim_param(:,j,ivcmax) = vcmax(:,j) |
|---|
| 2969 | assim_param(:,j,inue) = nue(:,j) |
|---|
| 2970 | assim_param(:,j,ileafn) = SUM(circ_class_biomass(:,j,:,ileaf,initrogen)*circ_class_n(:,j,:),2) |
|---|
| 2971 | ENDDO |
|---|
| 2972 | |
|---|
| 2973 | !! 5.6 Update forcing variables for soil carbon |
|---|
| 2974 | IF (TRIM(Cforcing_name) /= 'NONE') THEN |
|---|
| 2975 | npp_tot(:) = 0 |
|---|
| 2976 | DO j=2,nvm |
|---|
| 2977 | npp_tot(:) = npp_tot(:) + npp_daily(:,j) |
|---|
| 2978 | ENDDO |
|---|
| 2979 | ! ::nbyear Number of years saved for carbon spinup |
|---|
| 2980 | sf_time = MODULO(REAL(date,r_std)-1,one_year*REAL(nbyear,r_std)) |
|---|
| 2981 | iatt=FLOOR(sf_time/dt_forcesoil) + 1 |
|---|
| 2982 | IF (iatt == 0) iatt = iatt_old + 1 |
|---|
| 2983 | IF ((iatt<iatt_old) .and. (.not. cumul_Cforcing)) THEN |
|---|
| 2984 | nforce(:)=0 |
|---|
| 2985 | carbon_input(:,:,:,:) = zero |
|---|
| 2986 | nitrogen_input(:,:,:,:) = zero |
|---|
| 2987 | control_moist(:,:,:) = zero |
|---|
| 2988 | control_temp(:,:,:) = zero |
|---|
| 2989 | npp_equil(:,:) = zero |
|---|
| 2990 | drainage(:,:,:) = zero |
|---|
| 2991 | ENDIF |
|---|
| 2992 | iatt_old = iatt |
|---|
| 2993 | ! Update forcing |
|---|
| 2994 | nforce(iatt) = nforce(iatt)+1 |
|---|
| 2995 | carbon_input(:,:,:,iatt) = carbon_input(:,:,:,iatt) + som_input_daily(:,:,:,icarbon) |
|---|
| 2996 | nitrogen_input(:,:,:,iatt) = nitrogen_input(:,:,:,iatt) + som_input_daily(:,:,:,initrogen) |
|---|
| 2997 | control_moist(:,:,iatt) = control_moist(:,:,iatt) + control_moist_daily(:,:) |
|---|
| 2998 | control_temp(:,:,iatt) = control_temp(:,:,iatt) + control_temp_daily(:,:) |
|---|
| 2999 | npp_equil(:,iatt) = npp_equil(:,iatt) + npp_tot(:) |
|---|
| 3000 | drainage(:,:,iatt) = drainage(:,:,iatt) + drainage_daily(:,:) |
|---|
| 3001 | ENDIF |
|---|
| 3002 | |
|---|
| 3003 | !! 5.8 Write forcing file |
|---|
| 3004 | ! Note: if STOMATE is run in coupled mode the forcing file is written |
|---|
| 3005 | ! If run in stand-alone mode, the forcing file is read! |
|---|
| 3006 | IF ( TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 3007 | |
|---|
| 3008 | !! 5.8.1 Convert GPP to sechiba time steps |
|---|
| 3009 | ! GPP is multiplied by coverage to obtain forcing @tex $(gC m^{-2} dt_stomate^{-1})$\f \end@tex $(m^2 m^{-2})$ @endtexonly |
|---|
| 3010 | ! @tex$ m^{-2}$ @endtex remains in the units because ::veget_cov_max is a fraction, not a |
|---|
| 3011 | ! surface area. In sechiba values are ponderated by surface and frac_no_bio. |
|---|
| 3012 | ! At the beginning of stomate, the units are converted. |
|---|
| 3013 | ! When we use forcesoil we call sechiba_main and so we need the have the same units as in sechiba. |
|---|
| 3014 | gpp_daily_x(:,:) = zero |
|---|
| 3015 | DO j = 2, nvm |
|---|
| 3016 | gpp_daily_x(:,j) = gpp_daily_x(:,j) + & |
|---|
| 3017 | & gpp_daily(:,j) * dt_stomate / one_day * veget_cov_max(:,j) |
|---|
| 3018 | ENDDO |
|---|
| 3019 | |
|---|
| 3020 | ! Bare soil moisture availability has not been treated |
|---|
| 3021 | ! in STOMATE, update it here |
|---|
| 3022 | humrel_daily(:,ibare_sechiba) = humrel(:,ibare_sechiba) |
|---|
| 3023 | |
|---|
| 3024 | ! Update index to store the next forcing step in memory |
|---|
| 3025 | iisf = iisf+1 |
|---|
| 3026 | |
|---|
| 3027 | ! How many times have we treated this forcing state |
|---|
| 3028 | xn = REAL(nf_cumul(isf(iisf)),r_std) |
|---|
| 3029 | |
|---|
| 3030 | !! 5.8.2 Cumulate forcing variables |
|---|
| 3031 | ! Cumulate forcing variables (calculate average) |
|---|
| 3032 | ! Note: precipitation is multiplied by dt_stomate/one_day to be consistent with |
|---|
| 3033 | ! the units in sechiba |
|---|
| 3034 | IF (cumul_forcing) THEN |
|---|
| 3035 | clay_fm(:,iisf) = (xn*clay_fm(:,iisf)+clay(:))/(xn+1.) |
|---|
| 3036 | silt_fm(:,iisf) = (xn*silt_fm(:,iisf)+silt(:))/(xn+1.) |
|---|
| 3037 | bulk_fm(:,iisf) = (xn*bulk_fm(:,iisf)+bulk(:))/(xn+1.) |
|---|
| 3038 | humrel_daily_fm(:,:,iisf) = & |
|---|
| 3039 | & (xn*humrel_daily_fm(:,:,iisf) + humrel_daily(:,:))/(xn+1.) |
|---|
| 3040 | litterhum_daily_fm(:,iisf) = & |
|---|
| 3041 | & (xn*litterhum_daily_fm(:,iisf)+litterhum_daily(:))/(xn+1.) |
|---|
| 3042 | t2m_daily_fm(:,iisf) = & |
|---|
| 3043 | & (xn*t2m_daily_fm(:,iisf)+t2m_daily(:))/(xn+1.) |
|---|
| 3044 | t2m_min_daily_fm(:,iisf) = & |
|---|
| 3045 | & (xn*t2m_min_daily_fm(:,iisf)+t2m_min_daily(:))/(xn+1.) |
|---|
| 3046 | tsurf_daily_fm(:,iisf) = & |
|---|
| 3047 | & (xn*tsurf_daily_fm(:,iisf)+tsurf_daily(:))/(xn+1.) |
|---|
| 3048 | tsoil_daily_fm(:,:,iisf) = & |
|---|
| 3049 | & (xn*tsoil_daily_fm(:,:,iisf)+tsoil_daily(:,:))/(xn+1.) |
|---|
| 3050 | soilhum_daily_fm(:,:,iisf) = & |
|---|
| 3051 | & (xn*soilhum_daily_fm(:,:,iisf)+soilhum_daily(:,:))/(xn+1.) |
|---|
| 3052 | precip_fm(:,iisf) = & |
|---|
| 3053 | & (xn*precip_fm(:,iisf)+precip_daily(:)*dt_stomate/one_day)/(xn+1.) |
|---|
| 3054 | gpp_daily_fm(:,:,iisf) = & |
|---|
| 3055 | & (xn*gpp_daily_fm(:,:,iisf) + gpp_daily_x(:,:))/(xn+1.) |
|---|
| 3056 | veget_fm(:,:,iisf) = & |
|---|
| 3057 | & (xn*veget_fm(:,:,iisf) + veget(:,:) )/(xn+1.) |
|---|
| 3058 | veget_max_fm(:,:,iisf) = & |
|---|
| 3059 | & (xn*veget_max_fm(:,:,iisf) + veget_max(:,:) )/(xn+1.) |
|---|
| 3060 | !!$ lai_fm(:,:,iisf) = & |
|---|
| 3061 | !!$ & (xn*lai_fm(:,:,iisf) + lai(:,:) )/(xn+1.) |
|---|
| 3062 | drainage_fm(:,:,iisf) = & |
|---|
| 3063 | & (xn*drainage_fm(:,:,iisf) + drainage_daily(:,:) )/(xn+1.) |
|---|
| 3064 | ELSE |
|---|
| 3065 | ! Here we just calculate the values |
|---|
| 3066 | clay_fm(:,iisf) = clay(:) |
|---|
| 3067 | silt_fm(:,iisf) = silt(:) |
|---|
| 3068 | bulk_fm(:,iisf) = bulk(:) |
|---|
| 3069 | humrel_daily_fm(:,:,iisf) = humrel_daily(:,:) |
|---|
| 3070 | litterhum_daily_fm(:,iisf) = litterhum_daily(:) |
|---|
| 3071 | t2m_daily_fm(:,iisf) = t2m_daily(:) |
|---|
| 3072 | t2m_min_daily_fm(:,iisf) =t2m_min_daily(:) |
|---|
| 3073 | tsurf_daily_fm(:,iisf) = tsurf_daily(:) |
|---|
| 3074 | tsoil_daily_fm(:,:,iisf) =tsoil_daily(:,:) |
|---|
| 3075 | soilhum_daily_fm(:,:,iisf) =soilhum_daily(:,:) |
|---|
| 3076 | precip_fm(:,iisf) = precip_daily(:) |
|---|
| 3077 | gpp_daily_fm(:,:,iisf) =gpp_daily_x(:,:) |
|---|
| 3078 | veget_fm(:,:,iisf) = veget(:,:) |
|---|
| 3079 | veget_max_fm(:,:,iisf) =veget_max(:,:) |
|---|
| 3080 | !!$ lai_fm(:,:,iisf) =lai(:,:) |
|---|
| 3081 | drainage_fm(:,:,iisf) =drainage_daily(:,:) |
|---|
| 3082 | ENDIF |
|---|
| 3083 | nf_cumul(isf(iisf)) = nf_cumul(isf(iisf))+1 |
|---|
| 3084 | |
|---|
| 3085 | ! 5.8.3 Do we have to write the forcing states? |
|---|
| 3086 | IF (iisf == nsfm) THEN |
|---|
| 3087 | |
|---|
| 3088 | !! 5.8.3.1 Write these forcing states |
|---|
| 3089 | CALL forcing_write(forcing_id,1,nsfm) |
|---|
| 3090 | ! determine which forcing states must be read |
|---|
| 3091 | isf(1) = isf(nsfm)+1 |
|---|
| 3092 | IF ( isf(1) > nsft ) isf(1) = 1 |
|---|
| 3093 | DO iisf = 2, nsfm |
|---|
| 3094 | isf(iisf) = isf(iisf-1)+1 |
|---|
| 3095 | IF (isf(iisf) > nsft) isf(iisf) = 1 |
|---|
| 3096 | ENDDO |
|---|
| 3097 | |
|---|
| 3098 | ! Read forcing variables - for debug use only |
|---|
| 3099 | ! CALL forcing_read(forcing_id,nsfm) |
|---|
| 3100 | iisf = 0 |
|---|
| 3101 | |
|---|
| 3102 | ENDIF |
|---|
| 3103 | |
|---|
| 3104 | ENDIF |
|---|
| 3105 | |
|---|
| 3106 | |
|---|
| 3107 | !!$ !! 5.9 Compute daily CO2 flux (AR5 output - not essential) |
|---|
| 3108 | !!$ ! CO2 flux in @tex $gC m^{-2} s^{-1}$ @endtex (positive towards the atmosphere) is sum of: |
|---|
| 3109 | !!$ ! (1) heterotrophic respiration from ground + (2) maintenance respiration |
|---|
| 3110 | !!$ ! from the plants + (3) growth respiration from the plants + (4) co2 |
|---|
| 3111 | !!$ ! emissions from fire - (5) co2 taken up in the DGVM to establish |
|---|
| 3112 | !!$ ! saplings - (6) co2 taken up by photosyntyhesis |
|---|
| 3113 | !!$ co2_flux_daily(:,:)= & |
|---|
| 3114 | !!$ & resp_maint_d(:,:) + resp_growth_d(:,:) + resp_hetero_d(:,:) + & |
|---|
| 3115 | !!$ & co2_fire(:,:) - atm_to_bm(:,:,icarbon) - gpp_daily(:,:) |
|---|
| 3116 | !!$ |
|---|
| 3117 | !!$ CALL xios_orchidee_send_field("nep",SUM(co2_flux_daily*veget_cov_max,dim=2)/1e3/one_day) |
|---|
| 3118 | !!$ |
|---|
| 3119 | !!$ IF ( hist_id_stom_IPCC > 0 ) THEN |
|---|
| 3120 | !!$ vartmp(:) = SUM(co2_flux_daily*veget_cov_max,dim=2)/1e3/one_day*contfrac |
|---|
| 3121 | !!$ CALL histwrite_p (hist_id_stom_IPCC, "nep", itime, & |
|---|
| 3122 | !!$ vartmp, kjpindex, hori_index) |
|---|
| 3123 | !!$ ENDIF |
|---|
| 3124 | !!$ |
|---|
| 3125 | !!$ ! See 5.9 for details on NEP + fire. At the monthly time step also |
|---|
| 3126 | !!$ ! harvest and land use change are calculated |
|---|
| 3127 | !!$ co2_flux_monthly(:,:) = co2_flux_monthly(:,:) + co2_flux_daily(:,:) |
|---|
| 3128 | !!$ harvest_above_monthly(:) = harvest_above_monthly(:) + harvest_above(:) |
|---|
| 3129 | !!$ flux_prod_monthly(:) = flux_prod_monthly(:) + convflux(:) + & |
|---|
| 3130 | !!$ & flux_prod10(:) + flux_prod100(:) |
|---|
| 3131 | !!$ |
|---|
| 3132 | !!$ !! 5.10 Compute monthly CO2 fluxes |
|---|
| 3133 | !!$ IF ( EndOfMonth ) THEN |
|---|
| 3134 | !!$ !! 5.10.1 Write history file for monthly fluxes |
|---|
| 3135 | !!$ CALL histwrite_p (hist_id_stomate, 'CO2FLUX', itime, & |
|---|
| 3136 | !!$ co2_flux_monthly, kjpindex*nvm, horipft_index) |
|---|
| 3137 | !!$ |
|---|
| 3138 | !!$ !?? I (=VB) translated the French, but the whole stuff does not make sense to me. |
|---|
| 3139 | !!$ ! If one deletes the montly cumulation, |
|---|
| 3140 | !!$ ! one should not forget this change in resolution(:,1)*resolution(:,2)*contfrac(:) |
|---|
| 3141 | !!$ ! Si on supprimer le cumul par mois, |
|---|
| 3142 | !!$ ! il ne faut pas oublier cette modif resolution(:,1)*resolution(:,2)*contfrac(:) |
|---|
| 3143 | !!$ ! Should be supressed, this is post-processing |
|---|
| 3144 | !!$ DO j=2, nvm |
|---|
| 3145 | !!$ co2_flux_monthly(:,j) = co2_flux_monthly(:,j)* & |
|---|
| 3146 | !!$ resolution(:,1)*resolution(:,2)*contfrac(:) |
|---|
| 3147 | !!$ ENDDO |
|---|
| 3148 | !!$ |
|---|
| 3149 | !!$ ! Should be supressed, this is post-processing |
|---|
| 3150 | !!$ ! ?? How does it differ from co2_flux_monthly?? |
|---|
| 3151 | !!$ net_co2_flux_monthly = zero |
|---|
| 3152 | !!$ DO ji=1,kjpindex |
|---|
| 3153 | !!$ DO j=2,nvm |
|---|
| 3154 | !!$ net_co2_flux_monthly = net_co2_flux_monthly + & |
|---|
| 3155 | !!$ & co2_flux_monthly(ji,j)*veget_cov_max(ji,j) |
|---|
| 3156 | !!$ ENDDO |
|---|
| 3157 | !!$ ENDDO |
|---|
| 3158 | !!$ |
|---|
| 3159 | !!$ |
|---|
| 3160 | !!$ !! 5.10.2 Cumulative fluxes of land use cover change, harvest and net biosphere production |
|---|
| 3161 | !!$ ! Parallel processing, gather the information from different processors. first argument is the lo |
|---|
| 3162 | !!$ ! local variable, the second argument is the global variable. bcast send it to all processors. |
|---|
| 3163 | !!$ net_flux_prod_monthly_sum = & |
|---|
| 3164 | !!$ & SUM(flux_prod_monthly(:)*resolution(:,1)*resolution(:,2)*contfrac(:))*1e-15 |
|---|
| 3165 | !!$ CALL reduce_sum(net_flux_prod_monthly_sum,net_flux_prod_monthly_tot) |
|---|
| 3166 | !!$ CALL bcast(net_flux_prod_monthly_tot) |
|---|
| 3167 | !!$ net_harvest_above_monthly_sum = & |
|---|
| 3168 | !!$ & SUM(harvest_above_monthly(:)*resolution(:,1)*resolution(:,2)*contfrac(:))*1e-15 |
|---|
| 3169 | !!$ CALL reduce_sum(net_harvest_above_monthly_sum,net_harvest_above_monthly_tot) |
|---|
| 3170 | !!$ CALL bcast(net_harvest_above_monthly_tot) |
|---|
| 3171 | !!$ net_co2_flux_monthly = net_co2_flux_monthly*1e-15 |
|---|
| 3172 | !!$ CALL reduce_sum(net_co2_flux_monthly,net_co2_flux_monthly_sum) |
|---|
| 3173 | !!$ CALL bcast(net_co2_flux_monthly_sum) |
|---|
| 3174 | !!$ net_biosp_prod_monthly_tot = & |
|---|
| 3175 | !!$ & ( net_co2_flux_monthly_sum + net_flux_prod_monthly_tot + & |
|---|
| 3176 | !!$ & net_harvest_above_monthly_tot ) |
|---|
| 3177 | !!$ |
|---|
| 3178 | !!$ WRITE(numout,9010) 'GLOBAL net_flux_prod_monthly (Peta gC/month) = ',net_flux_prod_monthly_tot |
|---|
| 3179 | !!$ WRITE(numout,9010) 'GLOBAL net_harvest_above_monthly (Peta gC/month) = ',net_harvest_above_monthly_tot |
|---|
| 3180 | !!$ WRITE(numout,9010) 'GLOBAL net_co2_flux_monthly (Peta gC/month) = ',net_co2_flux_monthly_sum |
|---|
| 3181 | !!$ WRITE(numout,9010) 'GLOBAL net_biosp_prod_monthly (Peta gC/month) = ',net_biosp_prod_monthly_tot |
|---|
| 3182 | !!$ |
|---|
| 3183 | !!$9010 FORMAT(A52,F17.14) |
|---|
| 3184 | !!$ |
|---|
| 3185 | !!$ ! Reset Monthly values |
|---|
| 3186 | !!$ co2_flux_monthly(:,:) = zero |
|---|
| 3187 | !!$ harvest_above_monthly(:) = zero |
|---|
| 3188 | !!$ flux_prod_monthly(:) = zero |
|---|
| 3189 | !!$ |
|---|
| 3190 | !!$ ENDIF ! Monthly processes - at the end of the month |
|---|
| 3191 | |
|---|
| 3192 | ! IF (spinup_analytic) THEN |
|---|
| 3193 | ! I (ASLA) Do not think we have to include the below calculations of |
|---|
| 3194 | ! nbp_accu. It is only used to calculate nbp_flux, but this variable is |
|---|
| 3195 | ! use for nothing except being written to the restart/being read from the |
|---|
| 3196 | ! restart. It is still included on CN, but there I do not see the use of |
|---|
| 3197 | ! it either. |
|---|
| 3198 | ! |
|---|
| 3199 | ! WRITE(numout,*) 'ERROR:check the code. There was nothing defined yet' |
|---|
| 3200 | ! CALL ipslerr_p(3,'ERROR:check the code', & |
|---|
| 3201 | ! 'there was nothing defined yet','','') |
|---|
| 3202 | |
|---|
| 3203 | !!$ CALL xios_orchidee_send_field("nep",SUM(co2_flux_daily*veget_cov_max,dim=2)/1e3/one_day) |
|---|
| 3204 | |
|---|
| 3205 | !+++CHECK+++ |
|---|
| 3206 | ! nbp_accu(:) = nbp_accu(:) + (-SUM(co2_flux_daily(:,:) * & |
|---|
| 3207 | ! veget_cov_max(:,:),dim=2) - (convflux(:) + flux_prod10(:) + & |
|---|
| 3208 | ! flux_prod100(:)) - harvest_above(:))/1e3 |
|---|
| 3209 | |
|---|
| 3210 | ! Daily NBP is used in the spin-up. Rather than starting from |
|---|
| 3211 | ! all the initial components as done previously we prefer to |
|---|
| 3212 | ! make use of the aggregated components calculated to check the |
|---|
| 3213 | ! mass balance closure. NBP is then the change in all |
|---|
| 3214 | ! biomass pools. |
|---|
| 3215 | |
|---|
| 3216 | !+++CHECK+++ |
|---|
| 3217 | ! pool_end and pool_begin need to be defined |
|---|
| 3218 | !!$ nbp_accu(:) = nbp_accu(:) + & |
|---|
| 3219 | !!$ SUM((pool_end(:,:,icarbon) - pool_start(:,:,icarbon)),2) |
|---|
| 3220 | !+++++++++++ |
|---|
| 3221 | |
|---|
| 3222 | ! ENDIF (spinup_analytic) |
|---|
| 3223 | !! 5.11 Reset daily variables |
|---|
| 3224 | humrel_daily(:,:) = zero |
|---|
| 3225 | litterhum_daily(:) = zero |
|---|
| 3226 | t2m_daily(:) = zero |
|---|
| 3227 | t2m_min_daily(:) = large_value |
|---|
| 3228 | tsurf_daily(:) = zero |
|---|
| 3229 | tsoil_daily(:,:) = zero |
|---|
| 3230 | soilhum_daily(:,:) = zero |
|---|
| 3231 | precip_daily(:) = zero |
|---|
| 3232 | gpp_daily(:,:) = zero |
|---|
| 3233 | resp_maint_part(:,:,:)=zero |
|---|
| 3234 | resp_hetero_d=zero |
|---|
| 3235 | drainage_daily(:,:) = zero |
|---|
| 3236 | plant_n_uptake_daily(:,:,:)=zero |
|---|
| 3237 | n_mineralisation_d(:,:)=zero |
|---|
| 3238 | IF (printlev_loc >= 3) THEN |
|---|
| 3239 | WRITE(numout,*) 'stomate_main: daily processes done' |
|---|
| 3240 | ENDIF |
|---|
| 3241 | |
|---|
| 3242 | |
|---|
| 3243 | ! 5.12 pool-based NBP. |
|---|
| 3244 | ! Calculate the end pool for the pool-based NBP estimate |
|---|
| 3245 | IF( SPINUP_ANALYTIC ) THEN |
|---|
| 3246 | DO ipar = 1,nparts |
|---|
| 3247 | DO icir=1, ncirc |
|---|
| 3248 | nbp_pool_end(:,:) = nbp_pool_end(:,:) + & |
|---|
| 3249 | (circ_class_biomass(:,:,icir,ipar,icarbon) * & |
|---|
| 3250 | circ_class_n(:,:,icir)*veget_cov_max(:,:)) |
|---|
| 3251 | ENDDO |
|---|
| 3252 | ENDDO |
|---|
| 3253 | ! To make sure we the carbon that leaves the ecosystem via heterotropic |
|---|
| 3254 | ! respiration |
|---|
| 3255 | ! in to account, the soil and litter pools are summed |
|---|
| 3256 | DO icarb = 1, ncarb |
|---|
| 3257 | nbp_pool_end(:,:) = nbp_pool_end(:,:) + & |
|---|
| 3258 | som(:,icarb,:,icarbon)*veget_cov_max(:,:) |
|---|
| 3259 | ENDDO |
|---|
| 3260 | |
|---|
| 3261 | DO ilitt = 1,nlitt |
|---|
| 3262 | DO ilev =1,nlevs |
|---|
| 3263 | nbp_pool_end(:,:) = nbp_pool_end(:,:) + & |
|---|
| 3264 | litter(:,ilitt,:,ilev,icarbon)*veget_cov_max(:,:) |
|---|
| 3265 | ENDDO |
|---|
| 3266 | ENDDO |
|---|
| 3267 | |
|---|
| 3268 | ! Calculate nbp for each time step |
|---|
| 3269 | nbp(:,:)=nbp_pool_end(:,:) - nbp_pool_start(:,:) |
|---|
| 3270 | ! Calculate an accumulated pool-based NBP |
|---|
| 3271 | nbp_accu_pool(:,:) = nbp_accu_pool(:,:) + nbp(:,:) |
|---|
| 3272 | |
|---|
| 3273 | ! reset the nbp_pool_start and nbp_pool_end |
|---|
| 3274 | nbp_pool_start(:,:) = nbp_pool_end |
|---|
| 3275 | nbp_pool_end(:,:) = zero |
|---|
| 3276 | |
|---|
| 3277 | ! Write to output |
|---|
| 3278 | CALL xios_orchidee_send_field("NBP_pool",nbp) |
|---|
| 3279 | ENDIF ! SPINUP_ANALYTIC |
|---|
| 3280 | |
|---|
| 3281 | ENDIF ! Daily processes - at the end of the day |
|---|
| 3282 | |
|---|
| 3283 | !! 6. Outputs from Stomate |
|---|
| 3284 | |
|---|
| 3285 | ! co2_flux receives a value from STOMATE only if STOMATE is activated. |
|---|
| 3286 | ! Otherwise, the calling hydrological module must do this itself. |
|---|
| 3287 | |
|---|
| 3288 | !! 6.1 Respiration and fluxes |
|---|
| 3289 | resp_maint(:,:) = resp_maint_radia(:,:)*veget_cov_max(:,:) |
|---|
| 3290 | resp_maint(:,ibare_sechiba) = zero |
|---|
| 3291 | resp_growth(:,:)= resp_growth_d(:,:)*veget_cov_max(:,:)*dt_sechiba/one_day |
|---|
| 3292 | resp_hetero(:,:) = resp_hetero_radia(:,:)*veget_cov_max(:,:) |
|---|
| 3293 | |
|---|
| 3294 | !! 6.2 Derived CO2 fluxes |
|---|
| 3295 | ! CO2 flux in gC m^{-2} s^{-1} (positive towards the atmosphere) is sum of: |
|---|
| 3296 | ! (1) heterotrophic respiration from ground + (2) maintenance respiration |
|---|
| 3297 | ! from the plants + (3) growth respiration from the plants + (4) co2 |
|---|
| 3298 | ! emissions from fire - (5) co2 taken up in the DGVM to establish |
|---|
| 3299 | ! saplings - (6) co2 taken up by photosyntyhesis |
|---|
| 3300 | co2_flux(:,:) = resp_hetero(:,:) + resp_maint(:,:) + resp_growth(:,:) & |
|---|
| 3301 | & + (co2_fire(:,:)-atm_to_bm(:,:,icarbon))*veget_cov_max(:,:)/one_day & |
|---|
| 3302 | & - gpp(:,:) |
|---|
| 3303 | |
|---|
| 3304 | temp_growth(:)=t2m_month(:)-tp_00 |
|---|
| 3305 | |
|---|
| 3306 | !! 7. Analytical spinup |
|---|
| 3307 | |
|---|
| 3308 | IF (spinup_analytic) THEN |
|---|
| 3309 | |
|---|
| 3310 | tau_CN_longterm = tau_CN_longterm + dt_sechiba/one_day |
|---|
| 3311 | |
|---|
| 3312 | !! 7.1. Update V and U at sechiba time step |
|---|
| 3313 | DO m = 2,nvm |
|---|
| 3314 | DO j = 1,kjpindex |
|---|
| 3315 | ! V <- A * V |
|---|
| 3316 | matrixV(j,m,:,:) = MATMUL(matrixA(j,m,:,:),matrixV(j,m,:,:)) |
|---|
| 3317 | ! U <- A*U + B |
|---|
| 3318 | vectorU(j,m,:) = MATMUL(matrixA(j,m,:,:),vectorU(j,m,:)) + vectorB(j,m,:) |
|---|
| 3319 | ENDDO ! loop pixels |
|---|
| 3320 | ENDDO ! loop PFTS |
|---|
| 3321 | |
|---|
| 3322 | |
|---|
| 3323 | !! 7.2. What happened at the end of the year ? |
|---|
| 3324 | IF (EndOfYear) THEN |
|---|
| 3325 | |
|---|
| 3326 | ! |
|---|
| 3327 | ! 7.2.1 Increase the years counter every EndOfyear |
|---|
| 3328 | ! |
|---|
| 3329 | global_years = global_years + 1 |
|---|
| 3330 | |
|---|
| 3331 | |
|---|
| 3332 | ! |
|---|
| 3333 | ! 7.2.3 Is global_years is a multiple of the period time ? |
|---|
| 3334 | ! |
|---|
| 3335 | |
|---|
| 3336 | ! |
|---|
| 3337 | ! 3.2.1 When global_years is a multiple of the spinup_period, we calculate : |
|---|
| 3338 | ! 1) the mean nbp flux over the period. This value is restarted |
|---|
| 3339 | ! 2) we solve the matrix system by Gauss Jordan method |
|---|
| 3340 | ! 3) We test if a point is at equilibrium : if yes, we mark the point (ok_equilibrium array) |
|---|
| 3341 | ! 4) Then we reset the matrix |
|---|
| 3342 | ! 5) We erase the carbon_stock calculated by ORCHIDEE by the one found by the method |
|---|
| 3343 | IF( MOD(global_years, spinup_period) == 0 ) THEN |
|---|
| 3344 | WRITE(numout,*) 'Spinup analytic : Calculate if system is in equlibrium. global_years=',global_years |
|---|
| 3345 | ! The number total of days during the forcing period is given by : |
|---|
| 3346 | ! spinup_period*365 (we consider only the noleap calendar) |
|---|
| 3347 | nbp_flux(:) = nbp_accu(:) / ( spinup_period * 365.) |
|---|
| 3348 | nbp_pool(:,:) = nbp_accu_pool(:,:) / ( spinup_period * 365.) |
|---|
| 3349 | ! write to output |
|---|
| 3350 | CALL xios_orchidee_send_field("NBP_pool_spinup",nbp_pool) |
|---|
| 3351 | |
|---|
| 3352 | ! Reset the values |
|---|
| 3353 | nbp_accu(:) = zero |
|---|
| 3354 | nbp_accu_pool(:,:) = zero |
|---|
| 3355 | |
|---|
| 3356 | carbon_stock(:,ibare_sechiba,:) = zero |
|---|
| 3357 | ! Prepare the matrix for the resolution |
|---|
| 3358 | ! Add a temporary matrix W which contains I-matrixV |
|---|
| 3359 | ! we should take the opposite of matrixV and add the identitiy : we solve (I-matrixV)*C = vectorU |
|---|
| 3360 | matrixW(:,:,:,:) = moins_un * matrixV(:,:,:,:) |
|---|
| 3361 | DO jv = 1,nbpools |
|---|
| 3362 | matrixW(:,:,jv,jv) = matrixW(:,:,jv,jv) + un |
|---|
| 3363 | ENDDO |
|---|
| 3364 | carbon_stock(:,:,:) = vectorU(:,:,:) |
|---|
| 3365 | |
|---|
| 3366 | ! |
|---|
| 3367 | ! Solve the linear system |
|---|
| 3368 | ! |
|---|
| 3369 | DO m = 2,nvm |
|---|
| 3370 | DO j = 1,kjpindex |
|---|
| 3371 | ! the solution will be stored in vectorU : so it should be restarted before |
|---|
| 3372 | ! loop over kjpindex and nvm, so we solved kjpindex*(nvm-1) (7,7) linear systems |
|---|
| 3373 | CALL gauss_jordan_method(nbpools,matrixW(j,m,:,:),carbon_stock(j,m,:)) |
|---|
| 3374 | ENDDO ! loop pixels |
|---|
| 3375 | ENDDO ! loop PFTS |
|---|
| 3376 | |
|---|
| 3377 | ! Reset temporary matrixW |
|---|
| 3378 | matrixW(:,:,:,:) = zero |
|---|
| 3379 | |
|---|
| 3380 | |
|---|
| 3381 | previous_stock(:,:,:) = current_stock(:,:,:) |
|---|
| 3382 | current_stock(:,:,:) = carbon_stock(:,:,:) |
|---|
| 3383 | |
|---|
| 3384 | ! The relative error is calculated over the passive carbon pool |
|---|
| 3385 | ! (sum over the pfts) over the pixel. |
|---|
| 3386 | CALL error_L1_passive(kjpindex,nvm, nbpools, current_stock, & |
|---|
| 3387 | previous_stock, veget_cov_max, eps_carbon, carbon_eq) |
|---|
| 3388 | |
|---|
| 3389 | !! ok_equilibrium is saved, |
|---|
| 3390 | WHERE( carbon_eq(:) .AND. .NOT.(ok_equilibrium(:)) ) |
|---|
| 3391 | ok_equilibrium(:) = .TRUE. |
|---|
| 3392 | ENDWHERE |
|---|
| 3393 | |
|---|
| 3394 | WRITE(numout,*) 'current_stock actif:',current_stock(test_grid,test_pft,iactive) |
|---|
| 3395 | WRITE(numout,*) 'current_stock slow:',current_stock(test_grid,test_pft,islow) |
|---|
| 3396 | WRITE(numout,*) 'current_stock passif:',current_stock(test_grid,test_pft,ipassive) |
|---|
| 3397 | WRITE(numout,*) 'current_stock surface:',current_stock(test_grid,test_pft,isurface) |
|---|
| 3398 | |
|---|
| 3399 | ! Reset matrixV for the pixel to the identity matrix and vectorU to zero |
|---|
| 3400 | matrixV(:,:,:,:) = zero |
|---|
| 3401 | vectorU(:,:,:) = zero |
|---|
| 3402 | DO jv = 1,nbpools |
|---|
| 3403 | matrixV(:,:,jv,jv) = un |
|---|
| 3404 | END DO |
|---|
| 3405 | WRITE(numout,*) 'Reset for matrixV and vectorU done' |
|---|
| 3406 | |
|---|
| 3407 | !! Write the values found in the standard outputs of ORCHIDEE |
|---|
| 3408 | litter(:,istructural,:,iabove,icarbon) = carbon_stock(:,:,istructural_above) |
|---|
| 3409 | litter(:,istructural,:,ibelow,icarbon) = carbon_stock(:,:,istructural_below) |
|---|
| 3410 | litter(:,imetabolic,:,iabove,icarbon) = carbon_stock(:,:,imetabolic_above) |
|---|
| 3411 | litter(:,imetabolic,:,ibelow,icarbon) = carbon_stock(:,:,imetabolic_below) |
|---|
| 3412 | litter(:,iwoody,:,iabove,icarbon) = carbon_stock(:,:,iwoody_above) |
|---|
| 3413 | litter(:,iwoody,:,ibelow,icarbon) = carbon_stock(:,:,iwoody_below) |
|---|
| 3414 | som(:,iactive,:,icarbon) = carbon_stock(:,:,iactive_pool) |
|---|
| 3415 | som(:,isurface,:,icarbon) = carbon_stock(:,:,isurface_pool) |
|---|
| 3416 | som(:,islow,:,icarbon) = carbon_stock(:,:,islow_pool) |
|---|
| 3417 | som(:,ipassive,:,icarbon) = carbon_stock(:,:,ipassive_pool) |
|---|
| 3418 | |
|---|
| 3419 | litter(:,:,:,:,initrogen) = zero |
|---|
| 3420 | som(:,:,:,initrogen) = zero |
|---|
| 3421 | |
|---|
| 3422 | WHERE( CN_som_litter_longterm(:,:,istructural_above) .GT. min_stomate) |
|---|
| 3423 | litter(:,istructural,:,iabove,initrogen) = carbon_stock(:,:,istructural_above) & |
|---|
| 3424 | / CN_som_litter_longterm(:,:,istructural_above) |
|---|
| 3425 | ENDWHERE |
|---|
| 3426 | |
|---|
| 3427 | WHERE( CN_som_litter_longterm(:,:,istructural_below) .GT. min_stomate) |
|---|
| 3428 | litter(:,istructural,:,ibelow,initrogen) = carbon_stock(:,:,istructural_below) & |
|---|
| 3429 | / CN_som_litter_longterm(:,:,istructural_below) |
|---|
| 3430 | ENDWHERE |
|---|
| 3431 | |
|---|
| 3432 | WHERE( CN_som_litter_longterm(:,:,imetabolic_above) .GT. min_stomate) |
|---|
| 3433 | litter(:,imetabolic,:,iabove,initrogen) = carbon_stock(:,:,imetabolic_above) & |
|---|
| 3434 | / CN_som_litter_longterm(:,:,imetabolic_above) |
|---|
| 3435 | ENDWHERE |
|---|
| 3436 | |
|---|
| 3437 | WHERE( CN_som_litter_longterm(:,:,imetabolic_below) .GT. min_stomate) |
|---|
| 3438 | litter(:,imetabolic,:,ibelow,initrogen) = carbon_stock(:,:,imetabolic_below) & |
|---|
| 3439 | / CN_som_litter_longterm(:,:,imetabolic_below) |
|---|
| 3440 | ENDWHERE |
|---|
| 3441 | |
|---|
| 3442 | WHERE( CN_som_litter_longterm(:,:,iwoody_above) .GT. min_stomate) |
|---|
| 3443 | litter(:,iwoody,:,iabove,initrogen) = carbon_stock(:,:,iwoody_above) & |
|---|
| 3444 | / CN_som_litter_longterm(:,:,iwoody_above) |
|---|
| 3445 | ENDWHERE |
|---|
| 3446 | |
|---|
| 3447 | WHERE( CN_som_litter_longterm(:,:,iwoody_below) .GT. min_stomate) |
|---|
| 3448 | litter(:,iwoody,:,ibelow,initrogen) = carbon_stock(:,:,iwoody_below) & |
|---|
| 3449 | / CN_som_litter_longterm(:,:,iwoody_below) |
|---|
| 3450 | ENDWHERE |
|---|
| 3451 | |
|---|
| 3452 | WHERE(CN_som_litter_longterm(:,:,iactive_pool) .GT. min_stomate) |
|---|
| 3453 | som(:,iactive,:,initrogen) = carbon_stock(:,:,iactive_pool) & |
|---|
| 3454 | / CN_som_litter_longterm(:,:,iactive_pool) |
|---|
| 3455 | ENDWHERE |
|---|
| 3456 | |
|---|
| 3457 | WHERE(CN_som_litter_longterm(:,:,isurface_pool) .GT. min_stomate) |
|---|
| 3458 | som(:,isurface,:,initrogen) = carbon_stock(:,:,isurface_pool) & |
|---|
| 3459 | / CN_som_litter_longterm(:,:,isurface_pool) |
|---|
| 3460 | ENDWHERE |
|---|
| 3461 | |
|---|
| 3462 | WHERE(CN_som_litter_longterm(:,:,islow_pool) .GT. min_stomate) |
|---|
| 3463 | som(:,islow,:,initrogen) = carbon_stock(:,:,islow_pool) & |
|---|
| 3464 | / CN_som_litter_longterm(:,:,islow_pool) |
|---|
| 3465 | ENDWHERE |
|---|
| 3466 | |
|---|
| 3467 | WHERE(CN_som_litter_longterm(:,:,ipassive_pool) .GT. min_stomate) |
|---|
| 3468 | som(:,ipassive,:,initrogen) = carbon_stock(:,:,ipassive_pool) & |
|---|
| 3469 | / CN_som_litter_longterm(:,:,ipassive_pool) |
|---|
| 3470 | ENDWHERE |
|---|
| 3471 | |
|---|
| 3472 | CN_som_litter_longterm(:,:,:) = zero |
|---|
| 3473 | tau_CN_longterm = dt_sechiba/one_day |
|---|
| 3474 | ! Final step, test if all points at the local domain are at equilibrium |
|---|
| 3475 | ! The simulation can be stopped when all local domains have reached the equilibrium |
|---|
| 3476 | IF(ALL(ok_equilibrium)) THEN |
|---|
| 3477 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon pools is reached for current local domain' |
|---|
| 3478 | ELSE |
|---|
| 3479 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon pools is not yet reached for current local domain' |
|---|
| 3480 | END IF |
|---|
| 3481 | ENDIF ! ( MOD(global_years,spinup_period) == 0) |
|---|
| 3482 | ENDIF ! (EndOfYear) |
|---|
| 3483 | |
|---|
| 3484 | ENDIF !(spinup_analytic) |
|---|
| 3485 | |
|---|
| 3486 | IF (printlev >= 4) WRITE(numout,*) 'Leaving stomate_main' |
|---|
| 3487 | |
|---|
| 3488 | END SUBROUTINE stomate_main |
|---|
| 3489 | |
|---|
| 3490 | !! ================================================================================================================================ |
|---|
| 3491 | !! SUBROUTINE : stomate_finalize |
|---|
| 3492 | !! |
|---|
| 3493 | !>\BRIEF Write variables to restart file |
|---|
| 3494 | !! |
|---|
| 3495 | !! DESCRIPTION : Write variables to restart file |
|---|
| 3496 | !! RECENT CHANGE(S) : None |
|---|
| 3497 | !! |
|---|
| 3498 | !! MAIN OUTPUT VARIABLE(S): |
|---|
| 3499 | !! |
|---|
| 3500 | !! REFERENCES : |
|---|
| 3501 | !! |
|---|
| 3502 | !! \n |
|---|
| 3503 | !_ ================================================================================================================================ |
|---|
| 3504 | |
|---|
| 3505 | SUBROUTINE stomate_finalize (kjit, kjpindex, index, clay, assim_param, silt, bulk, & |
|---|
| 3506 | circ_class_biomass, circ_class_n, lai_per_level, laieff_fit) |
|---|
| 3507 | |
|---|
| 3508 | IMPLICIT NONE |
|---|
| 3509 | |
|---|
| 3510 | !! 0. Variable and parameter declaration |
|---|
| 3511 | !! 0.1 Input variables |
|---|
| 3512 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 3513 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 3514 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! Indices of the terrestrial pixels only (unitless) |
|---|
| 3515 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 3516 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: silt !! Silt fraction of soil (0-1, unitless) |
|---|
| 3517 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: bulk !! Bulk density (kg/m**3) |
|---|
| 3518 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(in) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 3519 | !! photosynthesis |
|---|
| 3520 | REAL(r_std), DIMENSION(:,:,:,:,:), INTENT(in) :: circ_class_biomass !! Biomass components of the model tree |
|---|
| 3521 | !! within a circumference class |
|---|
| 3522 | !! class @tex $(g C ind^{-1})$ @endtex |
|---|
| 3523 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: circ_class_n !! Number of trees within each circumference |
|---|
| 3524 | !! class @tex $(m^{-2})$ @endtex |
|---|
| 3525 | REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: lai_per_level !! This is the LAI per vertical level |
|---|
| 3526 | !! @tex $(m^{2} m^{-2})$ |
|---|
| 3527 | TYPE(laieff_type),DIMENSION (:,:,:),INTENT(in) & |
|---|
| 3528 | :: laieff_fit !! Fitted parameters for the effective LAI |
|---|
| 3529 | |
|---|
| 3530 | !! 0.2 Output variables |
|---|
| 3531 | |
|---|
| 3532 | !! 0.4 Local variables |
|---|
| 3533 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 3534 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 3535 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 3536 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 3537 | REAL(r_std),DIMENSION(0:nbdl) :: z_soil !! Variable to store depth of the different soil layers (m) |
|---|
| 3538 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 3539 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 3540 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 3541 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 3542 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 3543 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 3544 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 3545 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_litter !! Litter heterotrophic respiration per ground area |
|---|
| 3546 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 3547 | !! ??Same variable is also used to |
|---|
| 3548 | !! store heterotrophic respiration per ground area |
|---|
| 3549 | !! over ::dt_sechiba?? |
|---|
| 3550 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_soil !! soil heterotrophic respiration |
|---|
| 3551 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 3552 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 3553 | !! covered by a PFT (fraction of ground area), |
|---|
| 3554 | !! taking into account LAI ??(= grid scale fpc)?? |
|---|
| 3555 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Maximum rate of carboxylation |
|---|
| 3556 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 3557 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 3558 | !! (0-1, unitless) |
|---|
| 3559 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 3560 | !! respiration, above and below (0-1, unitless) |
|---|
| 3561 | REAL(r_std),DIMENSION(kjpindex,ncarb,nvm,nelements) :: som_input_inst !! Quantity of carbon going into carbon pools from |
|---|
| 3562 | !! litter decomposition |
|---|
| 3563 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 3564 | |
|---|
| 3565 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 3566 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time |
|---|
| 3567 | !! step |
|---|
| 3568 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 3569 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 3570 | !! time step on one processor (Mb) |
|---|
| 3571 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 3572 | !! time step on all processors(Mb) |
|---|
| 3573 | REAL(r_std) :: xn !! How many times have we treated in this forcing |
|---|
| 3574 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 3575 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 3576 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 3577 | INTEGER(i_std) :: direct !! ?? |
|---|
| 3578 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! ?? |
|---|
| 3579 | REAL(r_std),DIMENSION(nbp_glo) :: clay_g !! Clay fraction of soil (0-1, unitless), parallel |
|---|
| 3580 | !! computing |
|---|
| 3581 | REAL(r_std),DIMENSION(nbp_glo) :: silt_g !! Silt fraction of soil (0-1, unitless), parallel |
|---|
| 3582 | !! computing |
|---|
| 3583 | REAL(r_std),DIMENSION(nbp_glo) :: bulk_g !! Bulk density (kg/m**3), parallel !! computing |
|---|
| 3584 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:,:) :: carbon_input_g !! Quantity of carbon going into carbon pools from |
|---|
| 3585 | !! litter decomposition |
|---|
| 3586 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex, parallel |
|---|
| 3587 | !! computing |
|---|
| 3588 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:,:) :: nitrogen_input_g !! Quantity of nitrogen going into nitrogen pools from |
|---|
| 3589 | !! litter decomposition |
|---|
| 3590 | !! @tex $(gC m^{-2} dtradia^{-1})$ @endtex, parallel |
|---|
| 3591 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_moist_g !! Moisture control of heterotrophic respiration |
|---|
| 3592 | !! (0-1, unitless), parallel computing |
|---|
| 3593 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_temp_g !! Temperature control of heterotrophic respiration |
|---|
| 3594 | !! (0-1, unitless), parallel computing |
|---|
| 3595 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: npp_equil_g !! Equilibrium NPP written to forcesoil |
|---|
| 3596 | !! @tex $(gC m^{-2} year^{-1})$ @endtex, parallel |
|---|
| 3597 | !! computing |
|---|
| 3598 | |
|---|
| 3599 | !!$ REAL(r_std) :: net_flux_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3600 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3601 | !!$ !! computing |
|---|
| 3602 | !!$ REAL(r_std) :: net_flux_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3603 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3604 | !!$ !! computing |
|---|
| 3605 | !!$ REAL(r_std) :: net_harvest_above_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3606 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3607 | !!$ !! computing |
|---|
| 3608 | !!$ REAL(r_std) :: net_harvest_above_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3609 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3610 | !!$ !! computing |
|---|
| 3611 | !!$ REAL(r_std) :: net_biosp_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3612 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3613 | !!$ !! computing |
|---|
| 3614 | !!$ REAL(r_std) :: net_biosp_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 3615 | !!$ !! reduce_sum and one for bcast??), parallel |
|---|
| 3616 | !! computing |
|---|
| 3617 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 3618 | !! used by ORCHIDEE |
|---|
| 3619 | |
|---|
| 3620 | |
|---|
| 3621 | !_ ================================================================================================================================ |
|---|
| 3622 | |
|---|
| 3623 | !! 1. Write restart file for stomate |
|---|
| 3624 | IF (printlev>=3) WRITE (numout,*) 'Write restart file for STOMATE' |
|---|
| 3625 | |
|---|
| 3626 | CALL writerestart & |
|---|
| 3627 | (kjpindex, index, & |
|---|
| 3628 | dt_days, date, & |
|---|
| 3629 | adapted, regenerate, & |
|---|
| 3630 | humrel_daily, gdd_init_date, litterhum_daily, & |
|---|
| 3631 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 3632 | soilhum_daily, precip_daily, & |
|---|
| 3633 | gpp_daily, npp_daily, turnover_daily, & |
|---|
| 3634 | humrel_month, humrel_week, humrel_growingseason, & |
|---|
| 3635 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 3636 | tsoil_month, soilhum_month, fireindex, firelitter, & |
|---|
| 3637 | maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 3638 | minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 3639 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 3640 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 3641 | precip_lastyear, precip_thisyear, & |
|---|
| 3642 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 3643 | PFTpresent, npp_longterm, lm_lastyearmax, lm_thisyearmax, & |
|---|
| 3644 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 3645 | turnover_longterm, gpp_week, resp_maint_part, & |
|---|
| 3646 | leaf_age, leaf_frac, & |
|---|
| 3647 | plant_status, when_growthinit, age, & |
|---|
| 3648 | resp_hetero_d, resp_maint_d, resp_growth_d, co2_fire, atm_to_bm, & |
|---|
| 3649 | veget_lastlight, everywhere, need_adjacent, & |
|---|
| 3650 | RIP_time, & |
|---|
| 3651 | time_hum_min, hum_min_dormance, & |
|---|
| 3652 | litter, dead_leaves, & |
|---|
| 3653 | som, lignin_struc, lignin_wood,turnover_time,& |
|---|
| 3654 | prod_s, prod_m, prod_l, & |
|---|
| 3655 | flux_s, flux_m, flux_l, flux_prod_s, flux_prod_m, & |
|---|
| 3656 | flux_prod_l, bm_to_litter, carb_mass_total, & |
|---|
| 3657 | Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 3658 | Tmin_spring_time, onset_date, & |
|---|
| 3659 | global_years, ok_equilibrium, nbp_accu, nbp_flux, & |
|---|
| 3660 | nbp_accu_pool, nbp_pool, nbp_pool_start, & |
|---|
| 3661 | matrixV, vectorU, previous_stock, current_stock, & |
|---|
| 3662 | assim_param, CN_som_litter_longterm, & |
|---|
| 3663 | tau_CN_longterm, KF, k_latosa_adapt, rue_longterm, & |
|---|
| 3664 | cn_leaf_min_season, & |
|---|
| 3665 | nstress_season, soil_n_min, p_O2, bact, & |
|---|
| 3666 | circ_class_biomass, circ_class_n, store_sum_delta_ba, & |
|---|
| 3667 | forest_managed, forest_managed_lastyear, & |
|---|
| 3668 | species_change_map, fm_change_map, lpft_replant, lai_per_level, & |
|---|
| 3669 | laieff_fit, wstress_season, wstress_month, & |
|---|
| 3670 | age_stand, rotation_n, last_cut, mai, pai, & |
|---|
| 3671 | previous_wood_volume, mai_count, coppice_dens, & |
|---|
| 3672 | light_tran_to_level_season, harvest_5y_area) |
|---|
| 3673 | |
|---|
| 3674 | !! 2. Write file with variables that force general processes in stomate |
|---|
| 3675 | IF ( allow_forcing_write ) THEN |
|---|
| 3676 | IF ( TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 3677 | CALL forcing_write(forcing_id,1,iisf) |
|---|
| 3678 | ! Close forcing file |
|---|
| 3679 | IF (is_root_prc) ier = NF90_CLOSE (forcing_id) |
|---|
| 3680 | forcing_id=-1 |
|---|
| 3681 | END IF |
|---|
| 3682 | END IF |
|---|
| 3683 | |
|---|
| 3684 | !! 3. Collect variables that force the soil processes in stomate |
|---|
| 3685 | IF (TRIM(Cforcing_name) /= 'NONE' ) THEN |
|---|
| 3686 | |
|---|
| 3687 | !! Collet variables |
|---|
| 3688 | WRITE(numout,*) & |
|---|
| 3689 | & 'stomate: writing the forcing file for carbon spinup' |
|---|
| 3690 | DO iatt = 1, nparan*nbyear |
|---|
| 3691 | IF ( nforce(iatt) > 0 ) THEN |
|---|
| 3692 | carbon_input(:,:,:,iatt) = & |
|---|
| 3693 | & carbon_input(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3694 | nitrogen_input(:,:,:,iatt) = & |
|---|
| 3695 | & nitrogen_input(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3696 | control_moist(:,:,iatt) = & |
|---|
| 3697 | & control_moist(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3698 | control_temp(:,:,iatt) = & |
|---|
| 3699 | & control_temp(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3700 | npp_equil(:,iatt) = & |
|---|
| 3701 | & npp_equil(:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3702 | drainage(:,:,iatt) = & |
|---|
| 3703 | & drainage(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 3704 | ELSE |
|---|
| 3705 | WRITE(numout,*) & |
|---|
| 3706 | & 'We have no soil carbon forcing data for this time step:', & |
|---|
| 3707 | & iatt |
|---|
| 3708 | WRITE(numout,*) ' -> we set them to zero' |
|---|
| 3709 | carbon_input(:,:,:,iatt) = zero |
|---|
| 3710 | nitrogen_input(:,:,:,iatt) = zero |
|---|
| 3711 | control_moist(:,:,iatt) = zero |
|---|
| 3712 | control_temp(:,:,iatt) = zero |
|---|
| 3713 | npp_equil(:,iatt) = zero |
|---|
| 3714 | ENDIF |
|---|
| 3715 | ENDDO |
|---|
| 3716 | |
|---|
| 3717 | ! Allocate memory for parallel computing |
|---|
| 3718 | IF (is_root_prc) THEN |
|---|
| 3719 | ALLOCATE(carbon_input_g(nbp_glo,ncarb,nvm,nparan*nbyear)) |
|---|
| 3720 | ALLOCATE(nitrogen_input_g(nbp_glo,ncarb,nvm,nparan*nbyear)) |
|---|
| 3721 | ALLOCATE(control_moist_g(nbp_glo,nlevs,nparan*nbyear)) |
|---|
| 3722 | ALLOCATE(control_temp_g(nbp_glo,nlevs,nparan*nbyear)) |
|---|
| 3723 | ALLOCATE(npp_equil_g(nbp_glo,nparan*nbyear)) |
|---|
| 3724 | ENDIF |
|---|
| 3725 | |
|---|
| 3726 | ! Gather distributed variables |
|---|
| 3727 | |
|---|
| 3728 | CALL gather(clay,clay_g) |
|---|
| 3729 | CALL gather(silt,silt_g) |
|---|
| 3730 | CALL gather(bulk,bulk_g) |
|---|
| 3731 | CALL gather(carbon_input,carbon_input_g) |
|---|
| 3732 | CALL gather(nitrogen_input,nitrogen_input_g) |
|---|
| 3733 | CALL gather(control_moist,control_moist_g) |
|---|
| 3734 | CALL gather(control_temp,control_temp_g) |
|---|
| 3735 | CALL gather(npp_equil,npp_equil_g) |
|---|
| 3736 | |
|---|
| 3737 | !! Create netcdf |
|---|
| 3738 | ! Create, define and populate a netcdf file containing the forcing data. |
|---|
| 3739 | ! For the root processor only (parallel computing). NF90_ are functions |
|---|
| 3740 | ! from and external library. |
|---|
| 3741 | IF (is_root_prc) THEN |
|---|
| 3742 | WRITE (numout,*) 'Create Cforcing file : ',TRIM(Cforcing_name) |
|---|
| 3743 | ! Create new netCDF dataset |
|---|
| 3744 | ier = NF90_CREATE (TRIM(Cforcing_name),NF90_64BIT_OFFSET ,Cforcing_id) |
|---|
| 3745 | IF (ier /= NF90_NOERR) THEN |
|---|
| 3746 | WRITE (numout,*) 'Error in creating Cforcing file : ',TRIM(Cforcing_name) |
|---|
| 3747 | CALL ipslerr_p (3,'stomate_finalize', & |
|---|
| 3748 | & 'PROBLEM creating Cforcing file', & |
|---|
| 3749 | & NF90_STRERROR(ier),'') |
|---|
| 3750 | END IF |
|---|
| 3751 | |
|---|
| 3752 | ! Add variable attribute |
|---|
| 3753 | ! Note ::nbp_glo is the number of global continental points |
|---|
| 3754 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 3755 | & 'kjpindex',REAL(nbp_glo,r_std)) |
|---|
| 3756 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 3757 | & 'nparan',REAL(nparan,r_std)) |
|---|
| 3758 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 3759 | & 'nbyear',REAL(nbyear,r_std)) |
|---|
| 3760 | |
|---|
| 3761 | ! Add new dimension |
|---|
| 3762 | ier = NF90_DEF_DIM (Cforcing_id,'points',nbp_glo,d_id(1)) |
|---|
| 3763 | ier = NF90_DEF_DIM (Cforcing_id,'carbtype',ncarb,d_id(2)) |
|---|
| 3764 | ier = NF90_DEF_DIM (Cforcing_id,'vegtype',nvm,d_id(3)) |
|---|
| 3765 | ier = NF90_DEF_DIM (Cforcing_id,'level',nlevs,d_id(4)) |
|---|
| 3766 | ier = NF90_DEF_DIM (Cforcing_id,'time_step',NF90_UNLIMITED,d_id(5)) |
|---|
| 3767 | |
|---|
| 3768 | ! Add new variable |
|---|
| 3769 | ier = NF90_DEF_VAR (Cforcing_id,'points', r_typ,d_id(1),vid) |
|---|
| 3770 | ier = NF90_DEF_VAR (Cforcing_id,'carbtype', r_typ,d_id(2),vid) |
|---|
| 3771 | ier = NF90_DEF_VAR (Cforcing_id,'vegtype', r_typ,d_id(3),vid) |
|---|
| 3772 | ier = NF90_DEF_VAR (Cforcing_id,'level', r_typ,d_id(4),vid) |
|---|
| 3773 | ier = NF90_DEF_VAR (Cforcing_id,'time_step', r_typ,d_id(5),vid) |
|---|
| 3774 | ier = NF90_DEF_VAR (Cforcing_id,'index', r_typ,d_id(1),vid) |
|---|
| 3775 | ier = NF90_DEF_VAR (Cforcing_id,'clay', r_typ,d_id(1),vid) |
|---|
| 3776 | ier = NF90_DEF_VAR (Cforcing_id,'silt', r_typ,d_id(1),vid) |
|---|
| 3777 | ier = NF90_DEF_VAR (Cforcing_id,'bulk', r_typ,d_id(1),vid) |
|---|
| 3778 | ier = NF90_DEF_VAR (Cforcing_id,'carbon_input',r_typ, & |
|---|
| 3779 | & (/ d_id(1),d_id(2),d_id(3),d_id(5) /),vid) |
|---|
| 3780 | ier = NF90_DEF_VAR (Cforcing_id,'nitrogen_input',r_typ, & |
|---|
| 3781 | & (/ d_id(1),d_id(2),d_id(3),d_id(5) /),vid) |
|---|
| 3782 | ier = NF90_DEF_VAR (Cforcing_id,'control_moist',r_typ, & |
|---|
| 3783 | & (/ d_id(1),d_id(4),d_id(5) /),vid) |
|---|
| 3784 | ier = NF90_DEF_VAR (Cforcing_id,'control_temp',r_typ, & |
|---|
| 3785 | & (/ d_id(1),d_id(4),d_id(5) /),vid) |
|---|
| 3786 | ier = NF90_DEF_VAR (Cforcing_id,'npp_equil',r_typ, & |
|---|
| 3787 | & (/ d_id(1),d_id(5) /),vid) |
|---|
| 3788 | |
|---|
| 3789 | ier = NF90_DEF_VAR (Cforcing_id,'drainage',r_typ, & |
|---|
| 3790 | & (/ d_id(1),d_id(6),d_id(6) /),vid) |
|---|
| 3791 | ier = NF90_ENDDEF (Cforcing_id) |
|---|
| 3792 | |
|---|
| 3793 | ! Given the name of a varaible, nf90_inq_varid finds the variable |
|---|
| 3794 | ! ID (::vid). Put data value(s) into variable ::vid |
|---|
| 3795 | ier = NF90_INQ_VARID (Cforcing_id,'points',vid) |
|---|
| 3796 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 3797 | & (/(REAL(i,r_std),i=1,nbp_glo)/)) |
|---|
| 3798 | ier = NF90_INQ_VARID (Cforcing_id,'carbtype',vid) |
|---|
| 3799 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 3800 | & (/(REAL(i,r_std),i=1,ncarb)/)) |
|---|
| 3801 | ier = NF90_INQ_VARID (Cforcing_id,'vegtype',vid) |
|---|
| 3802 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 3803 | & (/(REAL(i,r_std),i=1,nvm)/)) |
|---|
| 3804 | ier = NF90_INQ_VARID (Cforcing_id,'level',vid) |
|---|
| 3805 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 3806 | & (/(REAL(i,r_std),i=1,nlevs)/)) |
|---|
| 3807 | ier = NF90_INQ_VARID (Cforcing_id,'time_step',vid) |
|---|
| 3808 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 3809 | & (/(REAL(i,r_std),i=1,nparan*nbyear)/)) |
|---|
| 3810 | ier = NF90_INQ_VARID (Cforcing_id,'index',vid) |
|---|
| 3811 | ier = NF90_PUT_VAR (Cforcing_id,vid, REAL(index_g,r_std) ) |
|---|
| 3812 | ier = NF90_INQ_VARID (Cforcing_id,'clay',vid) |
|---|
| 3813 | ier = NF90_PUT_VAR (Cforcing_id,vid, clay_g ) |
|---|
| 3814 | ier = NF90_INQ_VARID (Cforcing_id,'silt',vid) |
|---|
| 3815 | ier = NF90_PUT_VAR (Cforcing_id,vid, silt_g ) |
|---|
| 3816 | ier = NF90_INQ_VARID (Cforcing_id,'bulk',vid) |
|---|
| 3817 | ier = NF90_PUT_VAR (Cforcing_id,vid, bulk_g ) |
|---|
| 3818 | ier = NF90_INQ_VARID (Cforcing_id,'carbon_input',vid) |
|---|
| 3819 | ier = NF90_PUT_VAR (Cforcing_id,vid, carbon_input_g ) |
|---|
| 3820 | ier = NF90_INQ_VARID (Cforcing_id,'nitrogen_input',vid) |
|---|
| 3821 | ier = NF90_PUT_VAR (Cforcing_id,vid, nitrogen_input_g ) |
|---|
| 3822 | ier = NF90_INQ_VARID (Cforcing_id,'control_moist',vid) |
|---|
| 3823 | ier = NF90_PUT_VAR (Cforcing_id,vid, control_moist_g ) |
|---|
| 3824 | ier = NF90_INQ_VARID (Cforcing_id,'control_temp',vid) |
|---|
| 3825 | ier = NF90_PUT_VAR (Cforcing_id,vid, control_temp_g ) |
|---|
| 3826 | ier = NF90_INQ_VARID (Cforcing_id,'npp_equil',vid) |
|---|
| 3827 | ier = NF90_PUT_VAR (Cforcing_id,vid, npp_equil_g ) |
|---|
| 3828 | |
|---|
| 3829 | ! Close netCDF |
|---|
| 3830 | ier = NF90_CLOSE (Cforcing_id) |
|---|
| 3831 | IF (ier /= NF90_NOERR) THEN |
|---|
| 3832 | CALL ipslerr_p (3,'stomate_finalize', & |
|---|
| 3833 | & 'PROBLEM in closing Cforcing file', & |
|---|
| 3834 | & NF90_STRERROR(ier),'') |
|---|
| 3835 | END IF |
|---|
| 3836 | |
|---|
| 3837 | Cforcing_id = -1 |
|---|
| 3838 | ENDIF |
|---|
| 3839 | |
|---|
| 3840 | ! Clear memory |
|---|
| 3841 | IF (is_root_prc) THEN |
|---|
| 3842 | DEALLOCATE(carbon_input_g) |
|---|
| 3843 | DEALLOCATE(nitrogen_input_g) |
|---|
| 3844 | DEALLOCATE(control_moist_g) |
|---|
| 3845 | DEALLOCATE(control_temp_g) |
|---|
| 3846 | DEALLOCATE(npp_equil_g) |
|---|
| 3847 | ENDIF |
|---|
| 3848 | |
|---|
| 3849 | ENDIF |
|---|
| 3850 | |
|---|
| 3851 | END SUBROUTINE stomate_finalize |
|---|
| 3852 | |
|---|
| 3853 | |
|---|
| 3854 | !! ================================================================================================================================ |
|---|
| 3855 | !! SUBROUTINE : stomate_init |
|---|
| 3856 | !! |
|---|
| 3857 | !>\BRIEF The routine is called only at the first simulation. At that |
|---|
| 3858 | !! time settings and flags are read and checked for internal consistency and |
|---|
| 3859 | !! memory is allocated for the variables in stomate. |
|---|
| 3860 | !! |
|---|
| 3861 | !! DESCRIPTION : The routine reads the |
|---|
| 3862 | !! following flags from the run definition file: |
|---|
| 3863 | !! -ipd (index of grid point for online diagnostics)\n |
|---|
| 3864 | !! -ok_herbivores (flag to activate herbivores)\n |
|---|
| 3865 | !! -treat_expansion (flag to activate PFT expansion across a pixel\n |
|---|
| 3866 | !! -harvest_agri (flag to harvest aboveground biomass from agricultural PFTs)\n |
|---|
| 3867 | !! \n |
|---|
| 3868 | !! Check for inconsistent setting between the following flags: |
|---|
| 3869 | !! -ok_stomate\n |
|---|
| 3870 | !! -ok_dgvm\n |
|---|
| 3871 | !! \n |
|---|
| 3872 | !! Memory is allocated for all the variables of stomate and new indexing tables |
|---|
| 3873 | !! are build. New indexing tables are needed because a single pixel can conatin |
|---|
| 3874 | !! several PFTs. The new indexing tables have separate indices for the different |
|---|
| 3875 | !! PFTs. Similar index tables are build for land use cover change.\n |
|---|
| 3876 | !! \n |
|---|
| 3877 | !! Several global variables and land cover change variables are initialized to |
|---|
| 3878 | !! zero.\n |
|---|
| 3879 | !! |
|---|
| 3880 | !! RECENT CHANGE(S) : None |
|---|
| 3881 | !! |
|---|
| 3882 | !! MAIN OUTPUT VARIABLE(S): Strictly speaking the subroutine has no output |
|---|
| 3883 | !! variables. However, the routine allocates memory and builds new indexing |
|---|
| 3884 | !! variables for later use.\n |
|---|
| 3885 | !! |
|---|
| 3886 | !! REFERENCE(S) : None |
|---|
| 3887 | !! |
|---|
| 3888 | !! FLOWCHART : None |
|---|
| 3889 | !! \n |
|---|
| 3890 | !_ ================================================================================================================================ |
|---|
| 3891 | |
|---|
| 3892 | SUBROUTINE stomate_init & |
|---|
| 3893 | & (kjpij, kjpindex, index, lalo, & |
|---|
| 3894 | & rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 3895 | |
|---|
| 3896 | !! 0. Variable and parameter declaration |
|---|
| 3897 | |
|---|
| 3898 | !! 0.1 Input variables |
|---|
| 3899 | |
|---|
| 3900 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid, including |
|---|
| 3901 | !! oceans (unitless) |
|---|
| 3902 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - number of terrestrial pixels |
|---|
| 3903 | !! (unitless) |
|---|
| 3904 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier |
|---|
| 3905 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier |
|---|
| 3906 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 3907 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in):: index !! Indices of the terrestrial pixels on the global |
|---|
| 3908 | !! map |
|---|
| 3909 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geogr. coordinates (latitude,longitude) (degrees) |
|---|
| 3910 | |
|---|
| 3911 | !! 0.2 Output variables |
|---|
| 3912 | |
|---|
| 3913 | !! 0.3 Modified variables |
|---|
| 3914 | |
|---|
| 3915 | !! 0.4 Local variables |
|---|
| 3916 | |
|---|
| 3917 | LOGICAL :: l_error !! Check errors in netcdf call |
|---|
| 3918 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 3919 | INTEGER(i_std) :: ji,j,ipd,l !! Indices |
|---|
| 3920 | INTEGER(i_std) :: idia !! indices |
|---|
| 3921 | !_ ================================================================================================================================ |
|---|
| 3922 | |
|---|
| 3923 | !! 1. Online diagnostics |
|---|
| 3924 | |
|---|
| 3925 | IF ( kjpindex > 0 ) THEN |
|---|
| 3926 | !Config Key = STOMATE_DIAGPT |
|---|
| 3927 | !Config Desc = Index of grid point for online diagnostics |
|---|
| 3928 | !Config If = OK_STOMATE |
|---|
| 3929 | !Config Def = 1 |
|---|
| 3930 | !Config Help = This is the index of the grid point which |
|---|
| 3931 | ! will be used for online diagnostics. |
|---|
| 3932 | !Config Units = [-] |
|---|
| 3933 | ! By default ::ipd is set to 1 |
|---|
| 3934 | ipd = 1 |
|---|
| 3935 | ! Get ::ipd from run definition file |
|---|
| 3936 | CALL getin_p('STOMATE_DIAGPT',ipd) |
|---|
| 3937 | ipd = MIN( ipd, kjpindex ) |
|---|
| 3938 | WRITE(numout,*) 'Stomate: ' |
|---|
| 3939 | WRITE(numout,*) ' Index of grid point for online diagnostics: ',ipd |
|---|
| 3940 | WRITE(numout,*) ' Lon, lat:',lalo(ipd,2),lalo(ipd,1) |
|---|
| 3941 | WRITE(numout,*) ' Index of this point on GCM grid: ',index(ipd) |
|---|
| 3942 | ! |
|---|
| 3943 | ENDIF |
|---|
| 3944 | |
|---|
| 3945 | !! 2. Check consistency of flags |
|---|
| 3946 | |
|---|
| 3947 | IF ( ( .NOT. ok_stomate ) .AND. ok_dgvm ) THEN |
|---|
| 3948 | WRITE(numout,*) 'Cannot do dynamical vegetation without STOMATE.' |
|---|
| 3949 | WRITE(numout,*) 'Inconsistency between ::ok_stomate and ::ok_dgvm' |
|---|
| 3950 | WRITE(numout,*) 'Stop: fatal error' |
|---|
| 3951 | STOP |
|---|
| 3952 | ENDIF |
|---|
| 3953 | |
|---|
| 3954 | !! 3. Communicate settings |
|---|
| 3955 | |
|---|
| 3956 | WRITE(numout,*) 'stomate first call - overview of the activated flags:' |
|---|
| 3957 | WRITE(numout,*) ' STOMATE: ', ok_stomate |
|---|
| 3958 | WRITE(numout,*) ' LPJ: ', ok_dgvm |
|---|
| 3959 | |
|---|
| 3960 | !! 4. Allocate memory for STOMATE's variables |
|---|
| 3961 | |
|---|
| 3962 | l_error = .FALSE. |
|---|
| 3963 | |
|---|
| 3964 | ALLOCATE(veget_cov_max(kjpindex,nvm),stat=ier) |
|---|
| 3965 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3966 | IF (l_error) THEN |
|---|
| 3967 | WRITE(numout,*) 'Memory allocation error for veget_cov_max. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3968 | STOP 'stomate_init' |
|---|
| 3969 | ENDIF |
|---|
| 3970 | |
|---|
| 3971 | ALLOCATE(adapted(kjpindex,nvm),stat=ier) |
|---|
| 3972 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3973 | IF (l_error) THEN |
|---|
| 3974 | WRITE(numout,*) 'Memory allocation error for adapted. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3975 | STOP 'stomate_init' |
|---|
| 3976 | ENDIF |
|---|
| 3977 | |
|---|
| 3978 | ALLOCATE(regenerate(kjpindex,nvm),stat=ier) |
|---|
| 3979 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3980 | IF (l_error) THEN |
|---|
| 3981 | WRITE(numout,*) 'Memory allocation error for regenerate. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3982 | STOP 'stomate_init' |
|---|
| 3983 | ENDIF |
|---|
| 3984 | |
|---|
| 3985 | ALLOCATE(humrel_daily(kjpindex,nvm),stat=ier) |
|---|
| 3986 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3987 | IF (l_error) THEN |
|---|
| 3988 | WRITE(numout,*) 'Memory allocation error for humrel_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3989 | STOP 'stomate_init' |
|---|
| 3990 | ENDIF |
|---|
| 3991 | |
|---|
| 3992 | ALLOCATE(vir_humrel_daily(kjpindex,nvm),stat=ier) |
|---|
| 3993 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3994 | IF (l_error) THEN |
|---|
| 3995 | WRITE(numout,*) 'Memory allocation error for vir_humrel_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3996 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 3997 | ENDIF |
|---|
| 3998 | vir_humrel_daily(:,:)=zero |
|---|
| 3999 | |
|---|
| 4000 | ALLOCATE(stressed_daily(kjpindex,nvm),stat=ier) |
|---|
| 4001 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4002 | IF (l_error) THEN |
|---|
| 4003 | WRITE(numout,*) 'Memory allocation error for stressed_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4004 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4005 | ENDIF |
|---|
| 4006 | stressed_daily = zero |
|---|
| 4007 | |
|---|
| 4008 | ALLOCATE(unstressed_daily(kjpindex,nvm),stat=ier) |
|---|
| 4009 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4010 | IF (l_error) THEN |
|---|
| 4011 | WRITE(numout,*) 'Memory allocation error for unstressed_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4012 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4013 | ENDIF |
|---|
| 4014 | unstressed_daily(:,:) = zero |
|---|
| 4015 | |
|---|
| 4016 | ALLOCATE(daylight(kjpindex,nvm),stat=ier) |
|---|
| 4017 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4018 | IF (l_error) THEN |
|---|
| 4019 | WRITE(numout,*) 'Memory allocation error for daylight. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4020 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4021 | ENDIF |
|---|
| 4022 | daylight(:,:) = zero |
|---|
| 4023 | |
|---|
| 4024 | ALLOCATE(light_tran_to_level_season(kjpindex,nvm,nlevels_tot),stat=ier) |
|---|
| 4025 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4026 | IF (l_error) THEN |
|---|
| 4027 | WRITE(numout,*) 'Memory allocation error for light_tran_to_level_season. We stop. We need kjpindex*nvm*nlevels_tot words', & |
|---|
| 4028 | kjpindex,nvm,nlevels_tot |
|---|
| 4029 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4030 | ENDIF |
|---|
| 4031 | light_tran_to_level_season = zero |
|---|
| 4032 | |
|---|
| 4033 | ALLOCATE(daylight_count(kjpindex,nvm),stat=ier) |
|---|
| 4034 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4035 | IF (l_error) THEN |
|---|
| 4036 | WRITE(numout,*) 'Memory allocation error for daylight_count. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4037 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4038 | ENDIF |
|---|
| 4039 | daylight_count(:,:) = zero |
|---|
| 4040 | |
|---|
| 4041 | ALLOCATE(transpir_supply_daily(kjpindex,nvm),stat=ier) |
|---|
| 4042 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4043 | IF (l_error) THEN |
|---|
| 4044 | WRITE(numout,*) 'Memory allocation error for transpir_supply_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4045 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4046 | ENDIF |
|---|
| 4047 | transpir_supply_daily=zero |
|---|
| 4048 | |
|---|
| 4049 | ALLOCATE(vir_transpir_supply_daily(kjpindex,nvm),stat=ier) |
|---|
| 4050 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4051 | IF (l_error) THEN |
|---|
| 4052 | WRITE(numout,*) 'Memory allocation error for vir_transpir_supply_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4053 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4054 | ENDIF |
|---|
| 4055 | vir_transpir_supply_daily=zero |
|---|
| 4056 | |
|---|
| 4057 | ALLOCATE(transpir_daily(kjpindex,nvm),stat=ier) |
|---|
| 4058 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4059 | IF (l_error) THEN |
|---|
| 4060 | WRITE(numout,*) 'Memory allocation error for transpir_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4061 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4062 | ENDIF |
|---|
| 4063 | transpir_daily=zero |
|---|
| 4064 | |
|---|
| 4065 | |
|---|
| 4066 | ALLOCATE(litterhum_daily(kjpindex),stat=ier) |
|---|
| 4067 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4068 | IF (l_error) THEN |
|---|
| 4069 | WRITE(numout,*) 'Memory allocation error for litterhum_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4070 | STOP 'stomate_init' |
|---|
| 4071 | ENDIF |
|---|
| 4072 | |
|---|
| 4073 | ALLOCATE(t2m_daily(kjpindex),stat=ier) |
|---|
| 4074 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4075 | IF (l_error) THEN |
|---|
| 4076 | WRITE(numout,*) 'Memory allocation error for t2m_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4077 | STOP 'stomate_init' |
|---|
| 4078 | ENDIF |
|---|
| 4079 | |
|---|
| 4080 | ALLOCATE(t2m_min_daily(kjpindex),stat=ier) |
|---|
| 4081 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4082 | IF (l_error) THEN |
|---|
| 4083 | WRITE(numout,*) 'Memory allocation error for t2m_min_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4084 | STOP 'stomate_init' |
|---|
| 4085 | ENDIF |
|---|
| 4086 | |
|---|
| 4087 | ALLOCATE(wind_speed_daily(kjpindex),stat=ier) |
|---|
| 4088 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4089 | IF (l_error) THEN |
|---|
| 4090 | WRITE(numout,*) 'Memory allocation error for wind_speed_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4091 | STOP 'stomate_init' |
|---|
| 4092 | ENDIF |
|---|
| 4093 | |
|---|
| 4094 | ALLOCATE(wind_max_daily(kjpindex),stat=ier) |
|---|
| 4095 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4096 | IF (l_error) THEN |
|---|
| 4097 | WRITE(numout,*) 'Memory allocation error for wind_max_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4098 | STOP 'stomate_init' |
|---|
| 4099 | ENDIF |
|---|
| 4100 | |
|---|
| 4101 | ALLOCATE(soil_temp_daily(kjpindex),stat=ier) |
|---|
| 4102 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4103 | IF (l_error) THEN |
|---|
| 4104 | WRITE(numout,*) 'Memory allocation error for soil_temp_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4105 | STOP 'stomate_init' |
|---|
| 4106 | ENDIF |
|---|
| 4107 | |
|---|
| 4108 | ALLOCATE(soil_max_daily(kjpindex),stat=ier) |
|---|
| 4109 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4110 | IF (l_error) THEN |
|---|
| 4111 | WRITE(numout,*) 'Memory allocation error for soil_max_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4112 | STOP 'stomate_init' |
|---|
| 4113 | ENDIF |
|---|
| 4114 | |
|---|
| 4115 | ALLOCATE(tsurf_daily(kjpindex),stat=ier) |
|---|
| 4116 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4117 | IF (l_error) THEN |
|---|
| 4118 | WRITE(numout,*) 'Memory allocation error for tsurf_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 4119 | STOP 'stomate_init' |
|---|
| 4120 | ENDIF |
|---|
| 4121 | |
|---|
| 4122 | ALLOCATE(tsoil_daily(kjpindex,nbdl),stat=ier) |
|---|
| 4123 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4124 | IF (l_error) THEN |
|---|
| 4125 | WRITE(numout,*) 'Memory allocation error for tsoil_daily. We stop. We need kjpindex*nbdl words',kjpindex,nbdl |
|---|
| 4126 | STOP 'stomate_init' |
|---|
| 4127 | ENDIF |
|---|
| 4128 | |
|---|
| 4129 | ALLOCATE(soilhum_daily(kjpindex,nbdl),stat=ier) |
|---|
| 4130 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4131 | IF (l_error) THEN |
|---|
| 4132 | WRITE(numout,*) 'Memory allocation error for soilhum_daily. We stop. We need kjpindex*nbdl words',kjpindex,nbdl |
|---|
| 4133 | STOP 'stomate_init' |
|---|
| 4134 | ENDIF |
|---|
| 4135 | |
|---|
| 4136 | ALLOCATE(precip_daily(kjpindex),stat=ier) |
|---|
| 4137 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4138 | IF (l_error) THEN |
|---|
| 4139 | WRITE(numout,*) 'Memory allocation error for precip_daily. We stop. We need kjpindex words',kjpindex,nvm |
|---|
| 4140 | STOP 'stomate_init' |
|---|
| 4141 | ENDIF |
|---|
| 4142 | |
|---|
| 4143 | ALLOCATE(gpp_daily(kjpindex,nvm),stat=ier) |
|---|
| 4144 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4145 | IF (l_error) THEN |
|---|
| 4146 | WRITE(numout,*) 'Memory allocation error for gpp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4147 | STOP 'stomate_init' |
|---|
| 4148 | ENDIF |
|---|
| 4149 | |
|---|
| 4150 | ALLOCATE(npp_daily(kjpindex,nvm),stat=ier) |
|---|
| 4151 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4152 | IF (l_error) THEN |
|---|
| 4153 | WRITE(numout,*) 'Memory allocation error for npp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4154 | STOP 'stomate_init' |
|---|
| 4155 | ENDIF |
|---|
| 4156 | |
|---|
| 4157 | ALLOCATE(turnover_daily(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4158 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4159 | IF (l_error) THEN |
|---|
| 4160 | WRITE(numout,*) 'Memory allocation error for turnover_daily. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4161 | & kjpindex,nvm,nparts,nelements |
|---|
| 4162 | STOP 'stomate_init' |
|---|
| 4163 | ENDIF |
|---|
| 4164 | |
|---|
| 4165 | ALLOCATE(turnover_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4166 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4167 | IF (l_error) THEN |
|---|
| 4168 | WRITE(numout,*) 'Memory allocation error for turnover_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4169 | & kjpindex,nvm,nparts,nelements |
|---|
| 4170 | STOP 'stomate_init' |
|---|
| 4171 | ENDIF |
|---|
| 4172 | |
|---|
| 4173 | ALLOCATE(humrel_month(kjpindex,nvm),stat=ier) |
|---|
| 4174 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4175 | IF (l_error) THEN |
|---|
| 4176 | WRITE(numout,*) 'Memory allocation error for humrel_month. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4177 | STOP 'stomate_init' |
|---|
| 4178 | ENDIF |
|---|
| 4179 | |
|---|
| 4180 | ALLOCATE(humrel_week(kjpindex,nvm),stat=ier) |
|---|
| 4181 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4182 | IF (l_error) THEN |
|---|
| 4183 | WRITE(numout,*) 'Memory allocation error for humrel_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4184 | STOP 'stomate_init' |
|---|
| 4185 | ENDIF |
|---|
| 4186 | |
|---|
| 4187 | ALLOCATE(humrel_growingseason(kjpindex,nvm),stat=ier) |
|---|
| 4188 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4189 | IF (l_error) THEN |
|---|
| 4190 | WRITE(numout,*) 'Memory allocation error for humrel_growingseason. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4191 | STOP 'stomate_init' |
|---|
| 4192 | ENDIF |
|---|
| 4193 | |
|---|
| 4194 | ALLOCATE(vir_humrel_growingseason(kjpindex,nvm),stat=ier) |
|---|
| 4195 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4196 | |
|---|
| 4197 | ALLOCATE(t2m_longterm(kjpindex),stat=ier) |
|---|
| 4198 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4199 | IF (l_error) THEN |
|---|
| 4200 | WRITE(numout,*) 'Memory allocation error for t2m_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4201 | STOP 'stomate_init' |
|---|
| 4202 | ENDIF |
|---|
| 4203 | |
|---|
| 4204 | ALLOCATE(t2m_month(kjpindex),stat=ier) |
|---|
| 4205 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4206 | IF (l_error) THEN |
|---|
| 4207 | WRITE(numout,*) 'Memory allocation error for t2m_month. We stop. We need kjpindex words',kjpindex |
|---|
| 4208 | STOP 'stomate_init' |
|---|
| 4209 | ENDIF |
|---|
| 4210 | |
|---|
| 4211 | ALLOCATE(Tseason(kjpindex),stat=ier) |
|---|
| 4212 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4213 | IF (l_error) THEN |
|---|
| 4214 | WRITE(numout,*) 'Memory allocation error for Tseason. We stop. We need kjpindex words',kjpindex |
|---|
| 4215 | STOP 'stomate_init' |
|---|
| 4216 | ENDIF |
|---|
| 4217 | |
|---|
| 4218 | ALLOCATE(Tseason_length(kjpindex),stat=ier) |
|---|
| 4219 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4220 | IF (l_error) THEN |
|---|
| 4221 | WRITE(numout,*) 'Memory allocation error for Tseason_length. We stop. We need kjpindex words',kjpindex |
|---|
| 4222 | STOP 'stomate_init' |
|---|
| 4223 | ENDIF |
|---|
| 4224 | |
|---|
| 4225 | ALLOCATE(Tseason_tmp(kjpindex),stat=ier) |
|---|
| 4226 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4227 | IF (l_error) THEN |
|---|
| 4228 | WRITE(numout,*) 'Memory allocation error for Tseason_tmp. We stop. We need kjpindex words',kjpindex |
|---|
| 4229 | STOP 'stomate_init' |
|---|
| 4230 | ENDIF |
|---|
| 4231 | |
|---|
| 4232 | ALLOCATE(Tmin_spring_time(kjpindex,nvm),stat=ier) |
|---|
| 4233 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4234 | IF (l_error) THEN |
|---|
| 4235 | WRITE(numout,*) 'Memory allocation error for Tmin_spring_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4236 | STOP 'stomate_init' |
|---|
| 4237 | ENDIF |
|---|
| 4238 | |
|---|
| 4239 | ALLOCATE(onset_date(kjpindex,nvm,2),stat=ier) |
|---|
| 4240 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4241 | IF (l_error) THEN |
|---|
| 4242 | WRITE(numout,*) 'Memory allocation error for onset_date. We stop. We need kjpindex*nvm*nparts words',kjpindex,nvm,2 |
|---|
| 4243 | STOP 'stomate_init' |
|---|
| 4244 | ENDIF |
|---|
| 4245 | |
|---|
| 4246 | ALLOCATE(t2m_week(kjpindex),stat=ier) |
|---|
| 4247 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4248 | IF (l_error) THEN |
|---|
| 4249 | WRITE(numout,*) 'Memory allocation error for t2m_week. We stop. We need kjpindex words',kjpindex |
|---|
| 4250 | STOP 'stomate_init' |
|---|
| 4251 | ENDIF |
|---|
| 4252 | |
|---|
| 4253 | ALLOCATE(tsoil_month(kjpindex,nbdl),stat=ier) |
|---|
| 4254 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4255 | IF (l_error) THEN |
|---|
| 4256 | WRITE(numout,*) 'Memory allocation error for tsoil_month. We stop. We need kjpindex*nbdl words',kjpindex,nbdl |
|---|
| 4257 | STOP 'stomate_init' |
|---|
| 4258 | ENDIF |
|---|
| 4259 | |
|---|
| 4260 | ALLOCATE(soilhum_month(kjpindex,nbdl),stat=ier) |
|---|
| 4261 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4262 | IF (l_error) THEN |
|---|
| 4263 | WRITE(numout,*) 'Memory allocation error for soilhum_month. We stop. We need kjpindex*nbdl words',kjpindex,nbdl |
|---|
| 4264 | STOP 'stomate_init' |
|---|
| 4265 | ENDIF |
|---|
| 4266 | |
|---|
| 4267 | ALLOCATE(fireindex(kjpindex,nvm),stat=ier) |
|---|
| 4268 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4269 | IF (l_error) THEN |
|---|
| 4270 | WRITE(numout,*) 'Memory allocation error for fireindex. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4271 | STOP 'stomate_init' |
|---|
| 4272 | ENDIF |
|---|
| 4273 | |
|---|
| 4274 | ALLOCATE(firelitter(kjpindex,nvm),stat=ier) |
|---|
| 4275 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4276 | IF (l_error) THEN |
|---|
| 4277 | WRITE(numout,*) 'Memory allocation error for firelitter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4278 | STOP 'stomate_init' |
|---|
| 4279 | ENDIF |
|---|
| 4280 | |
|---|
| 4281 | ALLOCATE(maxhumrel_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4282 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4283 | IF (l_error) THEN |
|---|
| 4284 | WRITE(numout,*) 'Memory allocation error for maxhumrel_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4285 | STOP 'stomate_init' |
|---|
| 4286 | ENDIF |
|---|
| 4287 | |
|---|
| 4288 | ALLOCATE(maxhumrel_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4289 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4290 | IF (l_error) THEN |
|---|
| 4291 | WRITE(numout,*) 'Memory allocation error for maxhumrel_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4292 | STOP 'stomate_init' |
|---|
| 4293 | ENDIF |
|---|
| 4294 | |
|---|
| 4295 | ALLOCATE(minhumrel_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4296 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4297 | IF (l_error) THEN |
|---|
| 4298 | WRITE(numout,*) 'Memory allocation error for minhumrel_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4299 | STOP 'stomate_init' |
|---|
| 4300 | ENDIF |
|---|
| 4301 | |
|---|
| 4302 | ALLOCATE(minhumrel_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4303 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4304 | IF (l_error) THEN |
|---|
| 4305 | WRITE(numout,*) 'Memory allocation error for minhumrel_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4306 | STOP 'stomate_init' |
|---|
| 4307 | ENDIF |
|---|
| 4308 | |
|---|
| 4309 | ALLOCATE(maxgppweek_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4310 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4311 | IF (l_error) THEN |
|---|
| 4312 | WRITE(numout,*) 'Memory allocation error for maxgppweek_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4313 | STOP 'stomate_init' |
|---|
| 4314 | ENDIF |
|---|
| 4315 | |
|---|
| 4316 | ALLOCATE(maxgppweek_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4317 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4318 | IF (l_error) THEN |
|---|
| 4319 | WRITE(numout,*) 'Memory allocation error for maxgppweek_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4320 | STOP 'stomate_init' |
|---|
| 4321 | ENDIF |
|---|
| 4322 | |
|---|
| 4323 | ALLOCATE(gdd0_lastyear(kjpindex),stat=ier) |
|---|
| 4324 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4325 | IF (l_error) THEN |
|---|
| 4326 | WRITE(numout,*) 'Memory allocation error for gdd0_lastyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4327 | STOP 'stomate_init' |
|---|
| 4328 | ENDIF |
|---|
| 4329 | |
|---|
| 4330 | ALLOCATE(gdd0_thisyear(kjpindex),stat=ier) |
|---|
| 4331 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4332 | IF (l_error) THEN |
|---|
| 4333 | WRITE(numout,*) 'Memory allocation error for gdd0_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4334 | STOP 'stomate_init' |
|---|
| 4335 | ENDIF |
|---|
| 4336 | |
|---|
| 4337 | ALLOCATE(gdd_init_date(kjpindex,2),stat=ier) |
|---|
| 4338 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4339 | IF (l_error) THEN |
|---|
| 4340 | WRITE(numout,*) 'Memory allocation error for gdd_init_date. We stop. We need kjpindex*2 words',kjpindex,2 |
|---|
| 4341 | STOP 'stomate_init' |
|---|
| 4342 | ENDIF |
|---|
| 4343 | |
|---|
| 4344 | ALLOCATE(gdd_from_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 4345 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4346 | IF (l_error) THEN |
|---|
| 4347 | WRITE(numout,*) 'Memory allocation error for gdd_from_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4348 | STOP 'stomate_init' |
|---|
| 4349 | ENDIF |
|---|
| 4350 | |
|---|
| 4351 | ALLOCATE(precip_lastyear(kjpindex),stat=ier) |
|---|
| 4352 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4353 | IF (l_error) THEN |
|---|
| 4354 | WRITE(numout,*) 'Memory allocation error for precip_lastyear. We stop. We need kjpindex*nvm words',kjpindex |
|---|
| 4355 | STOP 'stomate_init' |
|---|
| 4356 | ENDIF |
|---|
| 4357 | |
|---|
| 4358 | ALLOCATE(precip_thisyear(kjpindex),stat=ier) |
|---|
| 4359 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4360 | IF (l_error) THEN |
|---|
| 4361 | WRITE(numout,*) 'Memory allocation error for precip_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 4362 | STOP 'stomate_init' |
|---|
| 4363 | ENDIF |
|---|
| 4364 | |
|---|
| 4365 | ALLOCATE(gdd_m5_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4366 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4367 | IF (l_error) THEN |
|---|
| 4368 | WRITE(numout,*) 'Memory allocation error for gdd_m5_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4369 | STOP 'stomate_init' |
|---|
| 4370 | ENDIF |
|---|
| 4371 | |
|---|
| 4372 | ALLOCATE(gdd_midwinter(kjpindex,nvm),stat=ier) |
|---|
| 4373 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4374 | IF (l_error) THEN |
|---|
| 4375 | WRITE(numout,*) 'Memory allocation error for gdd_midwinter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4376 | STOP 'stomate_init' |
|---|
| 4377 | ENDIF |
|---|
| 4378 | |
|---|
| 4379 | ALLOCATE(ncd_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4380 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4381 | IF (l_error) THEN |
|---|
| 4382 | WRITE(numout,*) 'Memory allocation error for ncd_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4383 | STOP 'stomate_init' |
|---|
| 4384 | ENDIF |
|---|
| 4385 | |
|---|
| 4386 | ALLOCATE(ngd_minus5(kjpindex,nvm),stat=ier) |
|---|
| 4387 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4388 | IF (l_error) THEN |
|---|
| 4389 | WRITE(numout,*) 'Memory allocation error for ngd_minus5. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4390 | STOP 'stomate_init' |
|---|
| 4391 | ENDIF |
|---|
| 4392 | |
|---|
| 4393 | ALLOCATE(PFTpresent(kjpindex,nvm),stat=ier) |
|---|
| 4394 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4395 | IF (l_error) THEN |
|---|
| 4396 | WRITE(numout,*) 'Memory allocation error for PFTpresent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4397 | STOP 'stomate_init' |
|---|
| 4398 | ENDIF |
|---|
| 4399 | |
|---|
| 4400 | ALLOCATE(npp_longterm(kjpindex,nvm),stat=ier) |
|---|
| 4401 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4402 | IF (l_error) THEN |
|---|
| 4403 | WRITE(numout,*) 'Memory allocation error for npp_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4404 | STOP 'stomate_init' |
|---|
| 4405 | ENDIF |
|---|
| 4406 | |
|---|
| 4407 | ALLOCATE(lm_lastyearmax(kjpindex,nvm),stat=ier) |
|---|
| 4408 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4409 | IF (l_error) THEN |
|---|
| 4410 | WRITE(numout,*) 'Memory allocation error for lm_lastyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4411 | STOP 'stomate_init' |
|---|
| 4412 | ENDIF |
|---|
| 4413 | |
|---|
| 4414 | ALLOCATE(lm_thisyearmax(kjpindex,nvm),stat=ier) |
|---|
| 4415 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4416 | IF (l_error) THEN |
|---|
| 4417 | WRITE(numout,*) 'Memory allocation error for lm_thisyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4418 | STOP 'stomate_init' |
|---|
| 4419 | ENDIF |
|---|
| 4420 | |
|---|
| 4421 | ALLOCATE(maxfpc_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 4422 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4423 | IF (l_error) THEN |
|---|
| 4424 | WRITE(numout,*) 'Memory allocation error for maxfpc_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4425 | STOP 'stomate_init' |
|---|
| 4426 | ENDIF |
|---|
| 4427 | |
|---|
| 4428 | ALLOCATE(maxfpc_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 4429 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4430 | IF (l_error) THEN |
|---|
| 4431 | WRITE(numout,*) 'Memory allocation error for maxfpc_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4432 | STOP 'stomate_init' |
|---|
| 4433 | ENDIF |
|---|
| 4434 | |
|---|
| 4435 | ALLOCATE(turnover_longterm(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4436 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4437 | IF (l_error) THEN |
|---|
| 4438 | WRITE(numout,*) 'Memory allocation error for turnover_longterm. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4439 | & kjpindex,nvm,nparts,nelements |
|---|
| 4440 | STOP 'stomate_init' |
|---|
| 4441 | ENDIF |
|---|
| 4442 | |
|---|
| 4443 | ALLOCATE(gpp_week(kjpindex,nvm),stat=ier) |
|---|
| 4444 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4445 | IF (l_error) THEN |
|---|
| 4446 | WRITE(numout,*) 'Memory allocation error for gpp_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4447 | STOP 'stomate_init' |
|---|
| 4448 | ENDIF |
|---|
| 4449 | |
|---|
| 4450 | ALLOCATE(plant_status(kjpindex,nvm),stat=ier) |
|---|
| 4451 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4452 | IF (l_error) THEN |
|---|
| 4453 | WRITE(numout,*) 'Memory allocation error for plant_status. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4454 | STOP 'stomate_init' |
|---|
| 4455 | ENDIF |
|---|
| 4456 | |
|---|
| 4457 | ALLOCATE(when_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 4458 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4459 | IF (l_error) THEN |
|---|
| 4460 | WRITE(numout,*) 'Memory allocation error for when_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4461 | STOP 'stomate_init' |
|---|
| 4462 | ENDIF |
|---|
| 4463 | |
|---|
| 4464 | ALLOCATE(age(kjpindex,nvm),stat=ier) |
|---|
| 4465 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4466 | IF (l_error) THEN |
|---|
| 4467 | WRITE(numout,*) 'Memory allocation error for age. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4468 | STOP 'stomate_init' |
|---|
| 4469 | ENDIF |
|---|
| 4470 | |
|---|
| 4471 | ALLOCATE(resp_hetero_d(kjpindex,nvm),stat=ier) |
|---|
| 4472 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4473 | IF (l_error) THEN |
|---|
| 4474 | WRITE(numout,*) 'Memory allocation error for resp_hetero_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4475 | STOP 'stomate_init' |
|---|
| 4476 | ENDIF |
|---|
| 4477 | |
|---|
| 4478 | ALLOCATE(resp_hetero_radia(kjpindex,nvm),stat=ier) |
|---|
| 4479 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4480 | IF (l_error) THEN |
|---|
| 4481 | WRITE(numout,*) 'Memory allocation error for resp_hetero_radia. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4482 | STOP 'stomate_init' |
|---|
| 4483 | ENDIF |
|---|
| 4484 | |
|---|
| 4485 | ALLOCATE(resp_maint_d(kjpindex,nvm),stat=ier) |
|---|
| 4486 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4487 | IF (l_error) THEN |
|---|
| 4488 | WRITE(numout,*) 'Memory allocation error for resp_maint_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4489 | STOP 'stomate_init' |
|---|
| 4490 | ENDIF |
|---|
| 4491 | |
|---|
| 4492 | ALLOCATE(resp_growth_d(kjpindex,nvm),stat=ier) |
|---|
| 4493 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4494 | IF (l_error) THEN |
|---|
| 4495 | WRITE(numout,*) 'Memory allocation error for resp_growth_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4496 | STOP 'stomate_init' |
|---|
| 4497 | ENDIF |
|---|
| 4498 | |
|---|
| 4499 | ALLOCATE(co2_fire(kjpindex,nvm),stat=ier) |
|---|
| 4500 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4501 | IF (l_error) THEN |
|---|
| 4502 | WRITE(numout,*) 'Memory allocation error for co2_fire. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4503 | STOP 'stomate_init' |
|---|
| 4504 | ENDIF |
|---|
| 4505 | |
|---|
| 4506 | ALLOCATE(atm_to_bm(kjpindex,nvm,nelements),stat=ier) |
|---|
| 4507 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4508 | IF (l_error) THEN |
|---|
| 4509 | WRITE(numout,*) 'Memory allocation error for atm_to_bm. We stop. We need kjpindex*nvm words',kjpindex,nvm,nelements |
|---|
| 4510 | STOP 'stomate_init' |
|---|
| 4511 | ENDIF |
|---|
| 4512 | |
|---|
| 4513 | ALLOCATE(veget_lastlight(kjpindex,nvm),stat=ier) |
|---|
| 4514 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4515 | IF (l_error) THEN |
|---|
| 4516 | WRITE(numout,*) 'Memory allocation error for veget_lastlight. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4517 | STOP 'stomate_init' |
|---|
| 4518 | ENDIF |
|---|
| 4519 | |
|---|
| 4520 | ALLOCATE(everywhere(kjpindex,nvm),stat=ier) |
|---|
| 4521 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4522 | IF (l_error) THEN |
|---|
| 4523 | WRITE(numout,*) 'Memory allocation error for everywhere. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4524 | STOP 'stomate_init' |
|---|
| 4525 | ENDIF |
|---|
| 4526 | |
|---|
| 4527 | ALLOCATE(need_adjacent(kjpindex,nvm),stat=ier) |
|---|
| 4528 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4529 | IF (l_error) THEN |
|---|
| 4530 | WRITE(numout,*) 'Memory allocation error for need_adjacent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4531 | STOP 'stomate_init' |
|---|
| 4532 | ENDIF |
|---|
| 4533 | |
|---|
| 4534 | ALLOCATE(leaf_age(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 4535 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4536 | IF (l_error) THEN |
|---|
| 4537 | WRITE(numout,*) 'Memory allocation error for leaf_age. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 4538 | & kjpindex,nvm,nleafages |
|---|
| 4539 | STOP 'stomate_init' |
|---|
| 4540 | ENDIF |
|---|
| 4541 | |
|---|
| 4542 | ALLOCATE(leaf_frac(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 4543 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4544 | IF (l_error) THEN |
|---|
| 4545 | WRITE(numout,*) 'Memory allocation error for leaf_frac. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 4546 | & kjpindex,nvm,nleafages |
|---|
| 4547 | STOP 'stomate_init' |
|---|
| 4548 | ENDIF |
|---|
| 4549 | |
|---|
| 4550 | ALLOCATE(RIP_time(kjpindex,nvm),stat=ier) |
|---|
| 4551 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4552 | IF (l_error) THEN |
|---|
| 4553 | WRITE(numout,*) 'Memory allocation error for RIP_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4554 | STOP 'stomate_init' |
|---|
| 4555 | ENDIF |
|---|
| 4556 | |
|---|
| 4557 | ALLOCATE(time_hum_min(kjpindex,nvm),stat=ier) |
|---|
| 4558 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4559 | IF (l_error) THEN |
|---|
| 4560 | WRITE(numout,*) 'Memory allocation error for time_hum_min. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4561 | STOP 'stomate_init' |
|---|
| 4562 | ENDIF |
|---|
| 4563 | |
|---|
| 4564 | ALLOCATE(hum_min_dormance(kjpindex,nvm),stat=ier) |
|---|
| 4565 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4566 | IF (l_error) THEN |
|---|
| 4567 | WRITE(numout,*) 'Memory allocation error for hum_min_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4568 | STOP 'stomate_init' |
|---|
| 4569 | ENDIF |
|---|
| 4570 | |
|---|
| 4571 | |
|---|
| 4572 | ALLOCATE(litter(kjpindex,nlitt,nvm,nlevs,nelements),stat=ier) |
|---|
| 4573 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4574 | IF (l_error) THEN |
|---|
| 4575 | WRITE(numout,*) 'Memory allocation error for litter. We stop. We need kjpindex*nlitt*nvm*nlevs*nelements words', & |
|---|
| 4576 | & kjpindex,nlitt,nvm,nlevs,nelements |
|---|
| 4577 | STOP 'stomate_init' |
|---|
| 4578 | ENDIF |
|---|
| 4579 | |
|---|
| 4580 | ALLOCATE(dead_leaves(kjpindex,nvm,nlitt),stat=ier) |
|---|
| 4581 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4582 | IF (l_error) THEN |
|---|
| 4583 | WRITE(numout,*) 'Memory allocation error for dead_leaves. We stop. We need kjpindex*nvm*nlitt words', & |
|---|
| 4584 | & kjpindex,nvm,nlitt |
|---|
| 4585 | STOP 'stomate_init' |
|---|
| 4586 | ENDIF |
|---|
| 4587 | |
|---|
| 4588 | ALLOCATE(som(kjpindex,ncarb,nvm,nelements),stat=ier) |
|---|
| 4589 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4590 | IF (l_error) THEN |
|---|
| 4591 | WRITE(numout,*) 'Memory allocation error for som. We stop. We need kjpindex*ncarb*nvm*nelements words', & |
|---|
| 4592 | kjpindex,ncarb,nvm,nelements |
|---|
| 4593 | STOP 'stomate_init' |
|---|
| 4594 | ENDIF |
|---|
| 4595 | |
|---|
| 4596 | ALLOCATE(lignin_struc(kjpindex,nvm,nlevs),stat=ier) |
|---|
| 4597 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4598 | IF (l_error) THEN |
|---|
| 4599 | WRITE(numout,*) 'Memory allocation error for lignin_struc. We stop. We need kjpindex*nvm*nlevs words', & |
|---|
| 4600 | kjpindex,nvm,nlevs |
|---|
| 4601 | STOP 'stomate_init' |
|---|
| 4602 | ENDIF |
|---|
| 4603 | |
|---|
| 4604 | ALLOCATE(lignin_wood(kjpindex,nvm,nlevs),stat=ier) |
|---|
| 4605 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4606 | IF (l_error) THEN |
|---|
| 4607 | WRITE(numout,*) 'Memory allocation error for lignin_wood. We stop. We need kjpindex*nvm*nlevs words', & |
|---|
| 4608 | kjpindex,nvm,nlevs |
|---|
| 4609 | STOP 'stomate_init' |
|---|
| 4610 | ENDIF |
|---|
| 4611 | |
|---|
| 4612 | ALLOCATE(turnover_time(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4613 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4614 | IF (l_error) THEN |
|---|
| 4615 | WRITE(numout,*) 'Memory allocation error for turnover_time. We stop. We need kjpindex*nvm words', & |
|---|
| 4616 | kjpindex,nvm |
|---|
| 4617 | STOP 'stomate_init' |
|---|
| 4618 | ENDIF |
|---|
| 4619 | |
|---|
| 4620 | !!$ ALLOCATE(co2_flux_daily(kjpindex,nvm),stat=ier) |
|---|
| 4621 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 4622 | !!$ IF (l_error) THEN |
|---|
| 4623 | !!$ WRITE(numout,*) 'Memory allocation error for co2_flux_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4624 | !!$ STOP 'stomate_init' |
|---|
| 4625 | !!$ ENDIF |
|---|
| 4626 | |
|---|
| 4627 | !!$ ALLOCATE(co2_flux_monthly(kjpindex,nvm),stat=ier) |
|---|
| 4628 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 4629 | !!$ IF (l_error) THEN |
|---|
| 4630 | !!$ WRITE(numout,*) 'Memory allocation error for co2_flux_monthly. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4631 | !!$ STOP 'stomate_init' |
|---|
| 4632 | !!$ ENDIF |
|---|
| 4633 | !!$ |
|---|
| 4634 | !!$ ALLOCATE (flux_prod_monthly(kjpindex), stat=ier) |
|---|
| 4635 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 4636 | !!$ IF (l_error) THEN |
|---|
| 4637 | !!$ WRITE(numout,*) 'Memory allocation error for flux_prod_monthly. We stop. We need kjpindex words',kjpindex |
|---|
| 4638 | !!$ STOP 'stomate_init' |
|---|
| 4639 | !!$ ENDIF |
|---|
| 4640 | !!$ |
|---|
| 4641 | !!$ ALLOCATE (harvest_above_monthly(kjpindex), stat=ier) |
|---|
| 4642 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 4643 | !!$ IF (l_error) THEN |
|---|
| 4644 | !!$ WRITE(numout,*) 'Memory allocation error for harvest_above_monthly. We stop. We need kjpindex words',kjpindex |
|---|
| 4645 | !!$ STOP 'stomate_init' |
|---|
| 4646 | !!$ ENDIF |
|---|
| 4647 | |
|---|
| 4648 | ALLOCATE(bm_to_litter(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4649 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4650 | IF (l_error) THEN |
|---|
| 4651 | WRITE(numout,*) 'Memory allocation error for bm_to_litter. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4652 | & kjpindex,nvm,nparts,nelements |
|---|
| 4653 | STOP 'stomate_init' |
|---|
| 4654 | ENDIF |
|---|
| 4655 | |
|---|
| 4656 | ALLOCATE(bm_to_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 4657 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4658 | IF (l_error) THEN |
|---|
| 4659 | WRITE(numout,*) 'Memory allocation error for bm_to_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 4660 | & kjpindex,nvm,nparts,nelements |
|---|
| 4661 | STOP 'stomate_init' |
|---|
| 4662 | ENDIF |
|---|
| 4663 | |
|---|
| 4664 | ALLOCATE(herbivores(kjpindex,nvm),stat=ier) |
|---|
| 4665 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4666 | IF (l_error) THEN |
|---|
| 4667 | WRITE(numout,*) 'Memory allocation error for herbivores. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4668 | STOP 'stomate_init' |
|---|
| 4669 | ENDIF |
|---|
| 4670 | |
|---|
| 4671 | ALLOCATE(resp_maint_part_radia(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4672 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4673 | IF (l_error) THEN |
|---|
| 4674 | WRITE(numout,*) 'Memory allocation error for resp_maint_part_radia. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 4675 | & kjpindex,nvm,nparts |
|---|
| 4676 | STOP 'stomate_init' |
|---|
| 4677 | ENDIF |
|---|
| 4678 | |
|---|
| 4679 | ALLOCATE(resp_maint_radia(kjpindex,nvm),stat=ier) |
|---|
| 4680 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4681 | IF (l_error) THEN |
|---|
| 4682 | WRITE(numout,*) 'Memory allocation error for resp_maint_radia. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4683 | STOP 'stomate_init' |
|---|
| 4684 | ENDIF |
|---|
| 4685 | |
|---|
| 4686 | ALLOCATE(resp_maint_part(kjpindex,nvm,nparts),stat=ier) |
|---|
| 4687 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4688 | IF (l_error) THEN |
|---|
| 4689 | WRITE(numout,*) 'Memory allocation error for resp_maint_part. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 4690 | & kjpindex,nvm,nparts |
|---|
| 4691 | STOP 'stomate_init' |
|---|
| 4692 | ENDIF |
|---|
| 4693 | resp_maint_part(:,:,:) = zero |
|---|
| 4694 | |
|---|
| 4695 | ALLOCATE(hori_index(kjpindex),stat=ier) |
|---|
| 4696 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4697 | IF (l_error) THEN |
|---|
| 4698 | WRITE(numout,*) 'Memory allocation error for hori_index. We stop. We need kjpindex words',kjpindex |
|---|
| 4699 | STOP 'stomate_init' |
|---|
| 4700 | ENDIF |
|---|
| 4701 | |
|---|
| 4702 | ALLOCATE(horipft_index(kjpindex*nvm),stat=ier) |
|---|
| 4703 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4704 | IF (l_error) THEN |
|---|
| 4705 | WRITE(numout,*) 'Memory allocation error for horipft_index. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4706 | STOP 'stomate_init' |
|---|
| 4707 | ENDIF |
|---|
| 4708 | |
|---|
| 4709 | ALLOCATE(horican_index(kjpindex*nlevels_tot),stat=ier) |
|---|
| 4710 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4711 | IF (l_error) THEN |
|---|
| 4712 | WRITE(numout,*) 'Memory allocation error for horican_index. We stop. We need kjpindex*nlevels_tot words',& |
|---|
| 4713 | kjpindex*nlevels_tot |
|---|
| 4714 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4715 | ENDIF |
|---|
| 4716 | |
|---|
| 4717 | ALLOCATE(horicut_index(kjpindex*ncut_times),stat=ier) |
|---|
| 4718 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4719 | IF (l_error) THEN |
|---|
| 4720 | WRITE(numout,*) 'Memory allocation error for horicut_index. We stop. We need kjpindex*ncut_times words',& |
|---|
| 4721 | kjpindex*ncut_times |
|---|
| 4722 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4723 | ENDIF |
|---|
| 4724 | |
|---|
| 4725 | ALLOCATE (horip_s_index(kjpindex*nshort), stat=ier) |
|---|
| 4726 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4727 | IF (l_error) THEN |
|---|
| 4728 | WRITE(numout,*) 'Memory allocation error for horip_s_index. We stop. We need kjpindex*10 words',kjpindex,nshort |
|---|
| 4729 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4730 | ENDIF |
|---|
| 4731 | |
|---|
| 4732 | ALLOCATE (horip_m_index(kjpindex*nmedium), stat=ier) |
|---|
| 4733 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4734 | IF (l_error) THEN |
|---|
| 4735 | WRITE(numout,*) 'Memory allocation error for horip_m_index. We stop. We need kjpindex*10 words',kjpindex,nmedium |
|---|
| 4736 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4737 | ENDIF |
|---|
| 4738 | |
|---|
| 4739 | ALLOCATE (horip_l_index(kjpindex*100), stat=ier) |
|---|
| 4740 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4741 | IF (l_error) THEN |
|---|
| 4742 | WRITE(numout,*) 'Memory allocation error for horip_l_index. We stop. We need kjpindex*100 words',kjpindex,nlong |
|---|
| 4743 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4744 | ENDIF |
|---|
| 4745 | |
|---|
| 4746 | ALLOCATE (horip_ss_index(kjpindex*(nshort+1)), stat=ier) |
|---|
| 4747 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4748 | IF (l_error) THEN |
|---|
| 4749 | WRITE(numout,*) 'Memory allocation error for horip_ss_index. We stop. We need kjpindex*11 words',kjpindex,nshort+1 |
|---|
| 4750 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4751 | ENDIF |
|---|
| 4752 | |
|---|
| 4753 | ALLOCATE (horip_mm_index(kjpindex*(nmedium+1)), stat=ier) |
|---|
| 4754 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4755 | IF (l_error) THEN |
|---|
| 4756 | WRITE(numout,*) 'Memory allocation error for horip_mm_index. We stop. We need kjpindex*11 words',kjpindex,nmedium+1 |
|---|
| 4757 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4758 | ENDIF |
|---|
| 4759 | |
|---|
| 4760 | ALLOCATE (horip_ll_index(kjpindex*(nlong+1)), stat=ier) |
|---|
| 4761 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4762 | IF (l_error) THEN |
|---|
| 4763 | WRITE(numout,*) 'Memory allocation error for horip_ll_index. We stop. We need kjpindex*101 words',kjpindex,nlong+1 |
|---|
| 4764 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4765 | ENDIF |
|---|
| 4766 | |
|---|
| 4767 | ALLOCATE (prod_s(kjpindex,0:nshort,nelements), stat=ier) |
|---|
| 4768 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4769 | IF (l_error) THEN |
|---|
| 4770 | WRITE(numout,*) 'Memory allocation error for prod_s. We stop. We need kjpindex*(nshort+1)*nelements words', & |
|---|
| 4771 | kjpindex,nshort+1,nelements |
|---|
| 4772 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4773 | ENDIF |
|---|
| 4774 | |
|---|
| 4775 | ALLOCATE (prod_m(kjpindex,0:nmedium,nelements), stat=ier) |
|---|
| 4776 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4777 | IF (l_error) THEN |
|---|
| 4778 | WRITE(numout,*) 'Memory allocation error for prod_m. We stop. We need kjpindex*(nmedium+1)*nelements words', & |
|---|
| 4779 | kjpindex,nmedium+1,nelements |
|---|
| 4780 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4781 | ENDIF |
|---|
| 4782 | |
|---|
| 4783 | ALLOCATE (prod_l(kjpindex,0:nlong,nelements), stat=ier) |
|---|
| 4784 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4785 | IF (l_error) THEN |
|---|
| 4786 | WRITE(numout,*) 'Memory allocation error for prod_l. We stop. We need kjpindex*(nlong+1)*nelements words', & |
|---|
| 4787 | kjpindex,nlong+1,nelements |
|---|
| 4788 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4789 | ENDIF |
|---|
| 4790 | |
|---|
| 4791 | ALLOCATE (flux_s(kjpindex,nshort,nelements), stat=ier) |
|---|
| 4792 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4793 | IF (l_error) THEN |
|---|
| 4794 | WRITE(numout,*) 'Memory allocation error for flux_s. We stop. We need kjpindex*nshort*nelements words', & |
|---|
| 4795 | kjpindex,nshort,nelements |
|---|
| 4796 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4797 | ENDIF |
|---|
| 4798 | |
|---|
| 4799 | ALLOCATE (flux_m(kjpindex,nmedium,nelements), stat=ier) |
|---|
| 4800 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4801 | IF (l_error) THEN |
|---|
| 4802 | WRITE(numout,*) 'Memory allocation error for flux_m. We stop. We need kjpindex*nmedium words', & |
|---|
| 4803 | kjpindex,nmedium,nelements |
|---|
| 4804 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4805 | ENDIF |
|---|
| 4806 | |
|---|
| 4807 | ALLOCATE (flux_l(kjpindex,nlong,nelements), stat=ier) |
|---|
| 4808 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4809 | IF (l_error) THEN |
|---|
| 4810 | WRITE(numout,*) 'Memory allocation error for flux_l. We stop. We need kjpindex*nlong*nelements words', & |
|---|
| 4811 | kjpindex,nlong,nelements |
|---|
| 4812 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4813 | ENDIF |
|---|
| 4814 | |
|---|
| 4815 | ALLOCATE (flux_prod_s(kjpindex,nelements), stat=ier) |
|---|
| 4816 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4817 | IF (l_error) THEN |
|---|
| 4818 | WRITE(numout,*) 'Memory allocation error for flux_prod_s. We stop. We need kjpindex*nelements words',kjpindex,nelements |
|---|
| 4819 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4820 | ENDIF |
|---|
| 4821 | |
|---|
| 4822 | ALLOCATE (flux_prod_m(kjpindex,nelements), stat=ier) |
|---|
| 4823 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4824 | IF (l_error) THEN |
|---|
| 4825 | WRITE(numout,*) 'Memory allocation error for flux_prod_m. We stop. We need kjpindex*nelements words',kjpindex,nelements |
|---|
| 4826 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4827 | ENDIF |
|---|
| 4828 | |
|---|
| 4829 | ALLOCATE (flux_prod_l(kjpindex,nelements), stat=ier) |
|---|
| 4830 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4831 | IF (l_error) THEN |
|---|
| 4832 | WRITE(numout,*) 'Memory allocation error for flux_prod_l. We stop. We need kjpindex*nelements words',kjpindex,nelements |
|---|
| 4833 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 4834 | ENDIF |
|---|
| 4835 | |
|---|
| 4836 | ALLOCATE (carb_mass_total(kjpindex), stat=ier) |
|---|
| 4837 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4838 | IF (l_error) THEN |
|---|
| 4839 | WRITE(numout,*) 'Memory allocation error for carb_mass_total. We stop. We need kjpindex words',kjpindex |
|---|
| 4840 | STOP 'stomate_init' |
|---|
| 4841 | ENDIF |
|---|
| 4842 | |
|---|
| 4843 | ALLOCATE (som_input_daily(kjpindex,ncarb,nvm,nelements), stat=ier) |
|---|
| 4844 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4845 | IF (l_error) THEN |
|---|
| 4846 | WRITE(numout,*) 'Memory allocation error for som_input_daily. We stop. We need kjpindex*ncarb*nvm*nelements words', & |
|---|
| 4847 | & kjpindex,ncarb,nvm,nelements |
|---|
| 4848 | STOP 'stomate_init' |
|---|
| 4849 | ENDIF |
|---|
| 4850 | |
|---|
| 4851 | ALLOCATE (control_temp_daily(kjpindex,nlevs), stat=ier) |
|---|
| 4852 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4853 | IF (l_error) THEN |
|---|
| 4854 | WRITE(numout,*) 'Memory allocation error for control_temp_daily. We stop. We need kjpindex*nlevs words',kjpindex,nlevs |
|---|
| 4855 | STOP 'stomate_init' |
|---|
| 4856 | ENDIF |
|---|
| 4857 | |
|---|
| 4858 | ALLOCATE (control_moist_daily(kjpindex,nlevs), stat=ier) |
|---|
| 4859 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4860 | IF (l_error) THEN |
|---|
| 4861 | WRITE(numout,*) 'Memory allocation error for control_moist_daily. We stop. We need kjpindex*nlevs words',kjpindex,nlevs |
|---|
| 4862 | STOP 'stomate_init' |
|---|
| 4863 | ENDIF |
|---|
| 4864 | |
|---|
| 4865 | ALLOCATE (fpc_max(kjpindex,nvm), stat=ier) |
|---|
| 4866 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4867 | IF (l_error) THEN |
|---|
| 4868 | WRITE(numout,*) 'Memory allocation error for fpc_max. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4869 | STOP 'stomate_init' |
|---|
| 4870 | ENDIF |
|---|
| 4871 | |
|---|
| 4872 | ALLOCATE(cn_leaf_min_season(kjpindex,nvm),stat=ier) |
|---|
| 4873 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4874 | IF (l_error) THEN |
|---|
| 4875 | WRITE(numout,*) 'Memory allocation error for cn_leaf_min_season. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4876 | STOP 'stomate_init' |
|---|
| 4877 | ENDIF |
|---|
| 4878 | |
|---|
| 4879 | ALLOCATE(nstress_season(kjpindex,nvm),stat=ier) |
|---|
| 4880 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4881 | IF (l_error) THEN |
|---|
| 4882 | WRITE(numout,*) 'Memory allocation error for nstress_season. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4883 | STOP 'stomate_init' |
|---|
| 4884 | ENDIF |
|---|
| 4885 | |
|---|
| 4886 | ALLOCATE(soil_n_min(kjpindex,nvm,nnspec),stat=ier) |
|---|
| 4887 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4888 | IF (l_error) THEN |
|---|
| 4889 | WRITE(numout,*) 'Memory allocation error for soil_n_min. We stop. We need kjpindex*nvm words',kjpindex,nvm,nnspec |
|---|
| 4890 | STOP 'stomate_init' |
|---|
| 4891 | ENDIF |
|---|
| 4892 | |
|---|
| 4893 | ALLOCATE(p_O2(kjpindex,nvm),stat=ier) |
|---|
| 4894 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4895 | IF (l_error) THEN |
|---|
| 4896 | WRITE(numout,*) 'Memory allocation error for p_O2. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4897 | STOP 'stomate_init' |
|---|
| 4898 | ENDIF |
|---|
| 4899 | |
|---|
| 4900 | ALLOCATE(bact(kjpindex,nvm),stat=ier) |
|---|
| 4901 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4902 | IF (l_error) THEN |
|---|
| 4903 | WRITE(numout,*) 'Memory allocation error for bact. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 4904 | STOP 'stomate_init' |
|---|
| 4905 | ENDIF |
|---|
| 4906 | |
|---|
| 4907 | ALLOCATE(ok_equilibrium(kjpindex),stat=ier) |
|---|
| 4908 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4909 | IF (l_error) THEN |
|---|
| 4910 | WRITE(numout,*) 'Memory allocation error for ok_equilibrium. We stop. We need kjpindex words',kjpindex |
|---|
| 4911 | STOP 'stomate_init' |
|---|
| 4912 | ENDIF |
|---|
| 4913 | |
|---|
| 4914 | ALLOCATE(drainage_daily(kjpindex,nvm),stat=ier) |
|---|
| 4915 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4916 | IF (l_error) THEN |
|---|
| 4917 | WRITE(numout,*) ' Memory allocation error for drainage_daily. We stop. We need kjpindex words = ',kjpindex,nvm |
|---|
| 4918 | STOP 'drainage_daily' |
|---|
| 4919 | ENDIF |
|---|
| 4920 | |
|---|
| 4921 | ALLOCATE (plant_n_uptake_daily(kjpindex,nvm,nionspec), stat=ier) |
|---|
| 4922 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 4923 | IF (l_error) THEN |
|---|
| 4924 | WRITE(numout,*) ' Memory allocation error for plant_n_uptake_daily. We stop. We need kjpindex words = ',kjpindex*nvm*nionspec |
|---|
| 4925 | STOP 'plant_n_uptake_daily' |
|---|
| 4926 | ENDIF |
|---|
| 4927 | |
|---|
| 4928 | ALLOCATE (n_mineralisation_d(kjpindex,nvm), stat=ier) |
|---|
| 4929 | l_error = l_error .OR. (ier.NE.0) |
|---|
| 4930 | IF (l_error) THEN |
|---|
| 4931 | WRITE(numout,*) ' Memory allocation error for n_mineralisation_d. We stop. We need kjpindex words = ',kjpindex*nvm |
|---|
| 4932 | STOP 'n_mineralisation_d' |
|---|
| 4933 | ENDIF |
|---|
| 4934 | |
|---|
| 4935 | ALLOCATE(carbon_eq(kjpindex),stat=ier) |
|---|
| 4936 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4937 | IF (l_error) THEN |
|---|
| 4938 | WRITE(numout,*) 'Memory allocation error for carbon_eq. We stop. We need kjpindex words',kjpindex |
|---|
| 4939 | STOP 'stomate_init' |
|---|
| 4940 | ENDIF |
|---|
| 4941 | |
|---|
| 4942 | ALLOCATE(nbp_accu(kjpindex),stat=ier) |
|---|
| 4943 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4944 | IF (l_error) THEN |
|---|
| 4945 | WRITE(numout,*) 'Memory allocation error for nbp_accu. We stop. We need kjpindex words',kjpindex |
|---|
| 4946 | STOP 'stomate_init' |
|---|
| 4947 | ENDIF |
|---|
| 4948 | |
|---|
| 4949 | ALLOCATE(nbp_accu_pool(kjpindex,nvm),stat=ier) |
|---|
| 4950 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4951 | IF (l_error) THEN |
|---|
| 4952 | WRITE(numout,*) 'Memory allocation error for nbp_accu_pool. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4953 | STOP 'stomate_init' |
|---|
| 4954 | ENDIF |
|---|
| 4955 | |
|---|
| 4956 | |
|---|
| 4957 | ALLOCATE(nbp_flux(kjpindex),stat=ier) |
|---|
| 4958 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4959 | IF (l_error) THEN |
|---|
| 4960 | WRITE(numout,*) 'Memory allocation error for nbp_flux. We stop. We need kjpindex words',kjpindex |
|---|
| 4961 | STOP 'stomate_init' |
|---|
| 4962 | ENDIF |
|---|
| 4963 | |
|---|
| 4964 | ALLOCATE(nbp_pool(kjpindex,nvm),stat=ier) |
|---|
| 4965 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4966 | IF (l_error) THEN |
|---|
| 4967 | WRITE(numout,*) 'Memory allocation error for nbp_pool. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4968 | STOP 'stomate_init' |
|---|
| 4969 | ENDIF |
|---|
| 4970 | |
|---|
| 4971 | ALLOCATE(nbp_pool_start(kjpindex,nvm),stat=ier) |
|---|
| 4972 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4973 | IF (l_error) THEN |
|---|
| 4974 | WRITE(numout,*) 'Memory allocation error for nbp_pool_start. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4975 | STOP 'stomate_init' |
|---|
| 4976 | ENDIF |
|---|
| 4977 | |
|---|
| 4978 | ALLOCATE(nbp_pool_end(kjpindex,nvm),stat=ier) |
|---|
| 4979 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4980 | IF (l_error) THEN |
|---|
| 4981 | WRITE(numout,*) 'Memory allocation error for nbp_pool_end. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 4982 | STOP 'stomate_init' |
|---|
| 4983 | ENDIF |
|---|
| 4984 | |
|---|
| 4985 | ALLOCATE(matrixA(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 4986 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4987 | IF (l_error) THEN |
|---|
| 4988 | WRITE(numout,*) 'Memory allocation error for matrixA. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 4989 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 4990 | STOP 'stomate_init' |
|---|
| 4991 | ENDIF |
|---|
| 4992 | |
|---|
| 4993 | ALLOCATE(vectorB(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 4994 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4995 | IF (l_error) THEN |
|---|
| 4996 | WRITE(numout,*) 'Memory allocation error for vectorB. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 4997 | & kjpindex, nvm, nbpools |
|---|
| 4998 | STOP 'stomate_init' |
|---|
| 4999 | ENDIF |
|---|
| 5000 | |
|---|
| 5001 | ALLOCATE(vectorU(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5002 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5003 | IF (l_error) THEN |
|---|
| 5004 | WRITE(numout,*) 'Memory allocation error for vectorU. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5005 | & kjpindex, nvm, nbpools |
|---|
| 5006 | STOP 'stomate_init' |
|---|
| 5007 | ENDIF |
|---|
| 5008 | |
|---|
| 5009 | ALLOCATE(matrixV(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 5010 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5011 | IF (l_error) THEN |
|---|
| 5012 | WRITE(numout,*) 'Memory allocation error for matrixV. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 5013 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 5014 | STOP 'stomate_init' |
|---|
| 5015 | ENDIF |
|---|
| 5016 | |
|---|
| 5017 | ALLOCATE(matrixW(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 5018 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5019 | IF (l_error) THEN |
|---|
| 5020 | WRITE(numout,*) 'Memory allocation error for matrixW. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 5021 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 5022 | STOP 'stomate_init' |
|---|
| 5023 | ENDIF |
|---|
| 5024 | |
|---|
| 5025 | ALLOCATE(previous_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5026 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5027 | IF (l_error) THEN |
|---|
| 5028 | WRITE(numout,*) 'Memory allocation error for previous_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5029 | & kjpindex, nvm, nbpools |
|---|
| 5030 | STOP 'stomate_init' |
|---|
| 5031 | ENDIF |
|---|
| 5032 | |
|---|
| 5033 | ALLOCATE(current_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5034 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5035 | IF (l_error) THEN |
|---|
| 5036 | WRITE(numout,*) 'Memory allocation error for current_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5037 | & kjpindex, nvm, nbpools |
|---|
| 5038 | STOP 'stomate_init' |
|---|
| 5039 | ENDIF |
|---|
| 5040 | |
|---|
| 5041 | ALLOCATE(CN_som_litter_longterm(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 5042 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5043 | IF (l_error) THEN |
|---|
| 5044 | WRITE(numout,*) 'Memory allocation error for CN_som_litter_longterm. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 5045 | & kjpindex, nvm, nbpools |
|---|
| 5046 | STOP 'stomate_init' |
|---|
| 5047 | ENDIF |
|---|
| 5048 | |
|---|
| 5049 | ALLOCATE(KF(kjpindex,nvm),stat=ier) |
|---|
| 5050 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5051 | IF (l_error) THEN |
|---|
| 5052 | WRITE(numout,*) ' Memory allocation error for KF. We stop. We need nvm words = ',kjpindex*nvm |
|---|
| 5053 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5054 | ENDIF |
|---|
| 5055 | KF(:,:) = zero ! Is there a better place in the code for this? |
|---|
| 5056 | |
|---|
| 5057 | ALLOCATE(k_latosa_adapt(kjpindex,nvm),stat=ier) |
|---|
| 5058 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5059 | IF (l_error) THEN |
|---|
| 5060 | WRITE(numout,*) ' Memory allocation error for k_latosa_adapt. We stop. We need nvm words = ',kjpindex*nvm |
|---|
| 5061 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5062 | ENDIF |
|---|
| 5063 | |
|---|
| 5064 | ALLOCATE(harvest_pool(kjpindex,nvm,ndia_harvest+1,nelements),stat=ier) |
|---|
| 5065 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5066 | IF (l_error) THEN |
|---|
| 5067 | WRITE(numout,*) ' Memory allocation error for harvest_pool. We stop. We need many words = ',& |
|---|
| 5068 | kjpindex*nvm*(ndia_harvest+1)*nelements |
|---|
| 5069 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5070 | ENDIF |
|---|
| 5071 | harvest_pool(:,:,:,:) = zero |
|---|
| 5072 | |
|---|
| 5073 | ALLOCATE(harvest_type(kjpindex,nvm),stat=ier) |
|---|
| 5074 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5075 | IF (l_error) THEN |
|---|
| 5076 | WRITE(numout,*) ' Memory allocation error for harvest_type. We stop. We need many words = ',& |
|---|
| 5077 | kjpindex*nvm |
|---|
| 5078 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5079 | ENDIF |
|---|
| 5080 | harvest_type(:,:) = zero |
|---|
| 5081 | |
|---|
| 5082 | ALLOCATE(harvest_cut(kjpindex,nvm),stat=ier) |
|---|
| 5083 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5084 | IF (l_error) THEN |
|---|
| 5085 | WRITE(numout,*) ' Memory allocation error for harvest_cut. We stop. We need many words = ',& |
|---|
| 5086 | kjpindex*nvm |
|---|
| 5087 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5088 | ENDIF |
|---|
| 5089 | harvest_cut(:,:) = zero |
|---|
| 5090 | |
|---|
| 5091 | ALLOCATE(harvest_area(kjpindex,nvm),stat=ier) |
|---|
| 5092 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5093 | IF (l_error) THEN |
|---|
| 5094 | WRITE(numout,*) ' Memory allocation error for harvest_area. We stop. We need many words = ',& |
|---|
| 5095 | kjpindex*nvm |
|---|
| 5096 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5097 | ENDIF |
|---|
| 5098 | harvest_area(:,:) = zero |
|---|
| 5099 | |
|---|
| 5100 | ALLOCATE(harvest_5y_area(kjpindex,nvm,wind_years),stat=ier) |
|---|
| 5101 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5102 | IF (l_error) THEN |
|---|
| 5103 | WRITE(numout,*) ' Memory allocation error for harvest_5y_area. We stop. We need many words = ',& |
|---|
| 5104 | kjpindex*nvm*wind_years |
|---|
| 5105 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5106 | ENDIF |
|---|
| 5107 | harvest_5y_area(:,:,:)=zero |
|---|
| 5108 | |
|---|
| 5109 | ALLOCATE(harvest_pool_bound(0:ndia_harvest+1),stat=ier) |
|---|
| 5110 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5111 | IF (l_error) THEN |
|---|
| 5112 | WRITE(numout,*) ' Memory allocation error for harvest_pool_bound. ' // & |
|---|
| 5113 | 'We stop. We need ndia_harvest+2 words = ',& |
|---|
| 5114 | ndia_harvest+2 |
|---|
| 5115 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5116 | ENDIF |
|---|
| 5117 | |
|---|
| 5118 | ! Here we can initialize the values of this array, too. They |
|---|
| 5119 | ! should never change over the course of the simulation. |
|---|
| 5120 | harvest_pool_bound(ndia_harvest+1) = val_exp |
|---|
| 5121 | DO idia = 0,ndia_harvest |
|---|
| 5122 | harvest_pool_bound(idia) = max_harvest_dia * & |
|---|
| 5123 | REAL(idia,r_std) / REAL(ndia_harvest,r_std) |
|---|
| 5124 | ENDDO |
|---|
| 5125 | |
|---|
| 5126 | ALLOCATE(mai(kjpindex,nvm),stat=ier) |
|---|
| 5127 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5128 | IF (l_error) THEN |
|---|
| 5129 | WRITE(numout,*) ' Memory allocation error for mai. ' // & |
|---|
| 5130 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5131 | kjpindex*nvm |
|---|
| 5132 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5133 | ENDIF |
|---|
| 5134 | |
|---|
| 5135 | ALLOCATE(pai(kjpindex,nvm),stat=ier) |
|---|
| 5136 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5137 | IF (l_error) THEN |
|---|
| 5138 | WRITE(numout,*) ' Memory allocation error for pai. ' // & |
|---|
| 5139 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5140 | kjpindex*nvm |
|---|
| 5141 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5142 | ENDIF |
|---|
| 5143 | |
|---|
| 5144 | ALLOCATE(previous_wood_volume(kjpindex,nvm),stat=ier) |
|---|
| 5145 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5146 | IF (l_error) THEN |
|---|
| 5147 | WRITE(numout,*) ' Memory allocation error for previous_wood_volume. ' // & |
|---|
| 5148 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5149 | kjpindex*nvm |
|---|
| 5150 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5151 | ENDIF |
|---|
| 5152 | |
|---|
| 5153 | ALLOCATE(mai_count(kjpindex,nvm),stat=ier) |
|---|
| 5154 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5155 | IF (l_error) THEN |
|---|
| 5156 | WRITE(numout,*) 'Memory allocation error for mai_count. We stop. We need kjpindex*nvm words', & |
|---|
| 5157 | & kjpindex, nvm |
|---|
| 5158 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5159 | ENDIF |
|---|
| 5160 | |
|---|
| 5161 | ALLOCATE(coppice_dens(kjpindex,nvm),stat=ier) |
|---|
| 5162 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5163 | IF (l_error) THEN |
|---|
| 5164 | WRITE(numout,*) ' Memory allocation error for coppice_dens. ' // & |
|---|
| 5165 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5166 | kjpindex*nvm |
|---|
| 5167 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5168 | ENDIF |
|---|
| 5169 | |
|---|
| 5170 | ALLOCATE (rue_longterm(kjpindex,nvm), stat=ier) |
|---|
| 5171 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5172 | IF (l_error) THEN |
|---|
| 5173 | WRITE(numout,*) 'Memory allocation error for rue_longterm. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5174 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5175 | ENDIF |
|---|
| 5176 | rue_longterm(:,:) = un |
|---|
| 5177 | |
|---|
| 5178 | ALLOCATE (lab_fac(kjpindex,nvm), stat=ier) |
|---|
| 5179 | ! temp fix, initializing it here...the values get set in stomate_growth_fun_all, |
|---|
| 5180 | ! but they get used in stomate_resp beforehand, so maybe a code flow problem? |
|---|
| 5181 | lab_fac(:,:)=zero |
|---|
| 5182 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5183 | IF (l_error) THEN |
|---|
| 5184 | WRITE(numout,*) 'Memory allocation error for lab_fac. We stop. We need kjpindex*nlevs words',kjpindex,nvm |
|---|
| 5185 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5186 | ENDIF |
|---|
| 5187 | |
|---|
| 5188 | ALLOCATE(forest_managed(kjpindex,nvm),stat=ier) |
|---|
| 5189 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5190 | IF (l_error) THEN |
|---|
| 5191 | WRITE(numout,*) 'Memory allocation error for forest_managed. We stop. We need kjpindex*nvm words', & |
|---|
| 5192 | & kjpindex, nvm |
|---|
| 5193 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5194 | ENDIF |
|---|
| 5195 | |
|---|
| 5196 | ALLOCATE(forest_managed_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 5197 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5198 | IF (l_error) THEN |
|---|
| 5199 | WRITE(numout,*) 'Memory allocation error for forest_managed_lastyear. We stop. We need kjpindex*nvm words', & |
|---|
| 5200 | & kjpindex, nvm |
|---|
| 5201 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5202 | ENDIF |
|---|
| 5203 | |
|---|
| 5204 | ALLOCATE(species_change_map(kjpindex,nvm),stat=ier) |
|---|
| 5205 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5206 | IF (l_error) THEN |
|---|
| 5207 | WRITE(numout,*) 'Memory allocation error for species_change_map. We stop. We need kjpindex*nvm words', & |
|---|
| 5208 | & kjpindex, nvm |
|---|
| 5209 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5210 | ENDIF |
|---|
| 5211 | species_change_map(:,:)=0 |
|---|
| 5212 | |
|---|
| 5213 | ALLOCATE(fm_change_map(kjpindex,nvm),stat=ier) |
|---|
| 5214 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5215 | IF (l_error) THEN |
|---|
| 5216 | WRITE(numout,*) 'Memory allocation error for fm_change_map. We stop. We need kjpindex*nvm words', & |
|---|
| 5217 | & kjpindex, nvm |
|---|
| 5218 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5219 | ENDIF |
|---|
| 5220 | fm_change_map(:,:)=0 |
|---|
| 5221 | |
|---|
| 5222 | ALLOCATE(lpft_replant(kjpindex,nvm),stat=ier) |
|---|
| 5223 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5224 | IF (l_error) THEN |
|---|
| 5225 | WRITE(numout,*) 'Memory allocation error for lpft_replant. We stop. We need kjpindex*nvm words', & |
|---|
| 5226 | & kjpindex, nvm |
|---|
| 5227 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5228 | ENDIF |
|---|
| 5229 | lpft_replant(:,:)=.FALSE. |
|---|
| 5230 | |
|---|
| 5231 | ALLOCATE(age_stand(kjpindex,nvm),stat=ier) |
|---|
| 5232 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5233 | IF (l_error) THEN |
|---|
| 5234 | WRITE(numout,*) 'Memory allocation error for age_stand. We stop. We need kjpindex*nvm words', & |
|---|
| 5235 | & kjpindex, nvm |
|---|
| 5236 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5237 | ENDIF |
|---|
| 5238 | |
|---|
| 5239 | ALLOCATE(rotation_n(kjpindex,nvm),stat=ier) |
|---|
| 5240 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5241 | IF (l_error) THEN |
|---|
| 5242 | WRITE(numout,*) 'Memory allocation error for rotation_n. We stop. We need kjpindex*nvm words', & |
|---|
| 5243 | & kjpindex, nvm |
|---|
| 5244 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5245 | ENDIF |
|---|
| 5246 | |
|---|
| 5247 | ALLOCATE(last_cut(kjpindex,nvm),stat=ier) |
|---|
| 5248 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5249 | IF (l_error) THEN |
|---|
| 5250 | WRITE(numout,*) 'Memory allocation error for last_cut. We stop. We need kjpindex*nvm words', & |
|---|
| 5251 | & kjpindex, nvm |
|---|
| 5252 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5253 | ENDIF |
|---|
| 5254 | |
|---|
| 5255 | ALLOCATE(sigma(kjpindex,nvm),stat=ier) |
|---|
| 5256 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5257 | IF (l_error) THEN |
|---|
| 5258 | WRITE(numout,*) 'Memory allocation error for sigma. We stop. We need kjpindex*nvm words', & |
|---|
| 5259 | & kjpindex, nvm |
|---|
| 5260 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5261 | ENDIF |
|---|
| 5262 | |
|---|
| 5263 | ALLOCATE(litter_demand(kjpindex),stat=ier) |
|---|
| 5264 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5265 | IF (l_error) THEN |
|---|
| 5266 | WRITE(numout,*) ' Memory allocation error for litter_demand. ' // & |
|---|
| 5267 | 'We stop. We need kjpindex words = ',& |
|---|
| 5268 | kjpindex |
|---|
| 5269 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5270 | ENDIF |
|---|
| 5271 | |
|---|
| 5272 | ALLOCATE(wstress_season(kjpindex,nvm),stat=ier) |
|---|
| 5273 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5274 | IF (l_error) THEN |
|---|
| 5275 | WRITE(numout,*) ' Memory allocation error for wstress_season. ' // & |
|---|
| 5276 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5277 | kjpindex, nvm |
|---|
| 5278 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5279 | ENDIF |
|---|
| 5280 | |
|---|
| 5281 | ALLOCATE(wstress_month(kjpindex,nvm),stat=ier) |
|---|
| 5282 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5283 | IF (l_error) THEN |
|---|
| 5284 | WRITE(numout,*) ' Memory allocation error for wstress_month. ' // & |
|---|
| 5285 | 'We stop. We need kjpindex*nvm words = ',& |
|---|
| 5286 | kjpindex, nvm |
|---|
| 5287 | CALL ipslerr_p (3,'stomate_init', 'Memory allocation issue','','') |
|---|
| 5288 | ENDIF |
|---|
| 5289 | |
|---|
| 5290 | ALLOCATE(store_sum_delta_ba(kjpindex,nvm,ncirc),stat=ier) |
|---|
| 5291 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5292 | IF (l_error) THEN |
|---|
| 5293 | WRITE(numout,*) ' Memory allocation error for st_dist. ' // & |
|---|
| 5294 | 'We need kjpindex*nvm*ncirc words = ',kjpindex,nvm,ncirc |
|---|
| 5295 | CALL ipslerr_p (3,'stomate_main', & |
|---|
| 5296 | ' Memory allocation error for store_sum_delta_ba.','','') |
|---|
| 5297 | END IF |
|---|
| 5298 | |
|---|
| 5299 | !! 5. File definitions |
|---|
| 5300 | |
|---|
| 5301 | ! Store history and restart files in common variables |
|---|
| 5302 | hist_id_stomate = hist_id_stom |
|---|
| 5303 | hist_id_stomate_IPCC = hist_id_stom_IPCC |
|---|
| 5304 | rest_id_stomate = rest_id_stom |
|---|
| 5305 | |
|---|
| 5306 | ! In STOMATE reduced grids are used containing only terrestrial pixels. |
|---|
| 5307 | ! Build a new indexing table for the vegetation fields separating |
|---|
| 5308 | ! between the different PFTs. Note that ::index has dimension (kjpindex) |
|---|
| 5309 | ! wheras ::indexpft has dimension (kjpindex*nvm). |
|---|
| 5310 | |
|---|
| 5311 | hori_index(:) = index(:) |
|---|
| 5312 | |
|---|
| 5313 | DO j = 1, nvm |
|---|
| 5314 | DO ji = 1, kjpindex |
|---|
| 5315 | horipft_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5316 | ENDDO |
|---|
| 5317 | ENDDO |
|---|
| 5318 | |
|---|
| 5319 | DO j = 1, nlevels_tot |
|---|
| 5320 | DO ji = 1, kjpindex |
|---|
| 5321 | horican_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5322 | ENDDO |
|---|
| 5323 | ENDDO |
|---|
| 5324 | |
|---|
| 5325 | DO j = 1, ncut_times |
|---|
| 5326 | DO ji = 1, kjpindex |
|---|
| 5327 | horicut_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5328 | ENDDO |
|---|
| 5329 | ENDDO |
|---|
| 5330 | |
|---|
| 5331 | ! Similar index tables are build for the wood use |
|---|
| 5332 | DO j = 1, nshort |
|---|
| 5333 | DO ji = 1, kjpindex |
|---|
| 5334 | horip_s_index((j-1)*kjpindex+ji) = & |
|---|
| 5335 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5336 | ENDDO |
|---|
| 5337 | ENDDO |
|---|
| 5338 | |
|---|
| 5339 | DO j = 1, nmedium |
|---|
| 5340 | DO ji = 1, kjpindex |
|---|
| 5341 | horip_m_index((j-1)*kjpindex+ji) = & |
|---|
| 5342 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5343 | ENDDO |
|---|
| 5344 | ENDDO |
|---|
| 5345 | |
|---|
| 5346 | DO j = 1, nlong |
|---|
| 5347 | DO ji = 1, kjpindex |
|---|
| 5348 | horip_l_index((j-1)*kjpindex+ji) = & |
|---|
| 5349 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5350 | ENDDO |
|---|
| 5351 | ENDDO |
|---|
| 5352 | |
|---|
| 5353 | DO j = 1, nshort+1 |
|---|
| 5354 | DO ji = 1, kjpindex |
|---|
| 5355 | horip_ss_index((j-1)*kjpindex+ji) = & |
|---|
| 5356 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5357 | ENDDO |
|---|
| 5358 | ENDDO |
|---|
| 5359 | |
|---|
| 5360 | DO j = 1, nmedium+1 |
|---|
| 5361 | DO ji = 1, kjpindex |
|---|
| 5362 | horip_mm_index((j-1)*kjpindex+ji) = & |
|---|
| 5363 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5364 | ENDDO |
|---|
| 5365 | ENDDO |
|---|
| 5366 | |
|---|
| 5367 | DO j = 1, nlong+1 |
|---|
| 5368 | DO ji = 1, kjpindex |
|---|
| 5369 | horip_ll_index((j-1)*kjpindex+ji) = & |
|---|
| 5370 | index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 5371 | ENDDO |
|---|
| 5372 | ENDDO |
|---|
| 5373 | |
|---|
| 5374 | |
|---|
| 5375 | !! 6. Initialization of global and land cover change variables. |
|---|
| 5376 | |
|---|
| 5377 | ! All variables are cumulative variables. bm_to_litter is not and is therefore |
|---|
| 5378 | ! excluded |
|---|
| 5379 | ! bm_to_litter(:,:,:) = zero |
|---|
| 5380 | turnover_daily(:,:,:,:) = zero |
|---|
| 5381 | resp_hetero_d(:,:) = zero |
|---|
| 5382 | !!$ co2_flux_daily(:,:) = zero |
|---|
| 5383 | !!$ co2_flux_monthly(:,:) = zero |
|---|
| 5384 | !!$ flux_prod_monthly(:) = zero |
|---|
| 5385 | !!$ harvest_above_monthly(:) = zero |
|---|
| 5386 | control_moist_daily(:,:) = zero |
|---|
| 5387 | control_temp_daily(:,:) = zero |
|---|
| 5388 | som_input_daily(:,:,:,:) = zero |
|---|
| 5389 | drainage_daily(:,:) = zero |
|---|
| 5390 | fpc_max(:,:)=zero |
|---|
| 5391 | |
|---|
| 5392 | ! Land cover change variables |
|---|
| 5393 | prod_s(:,:,:) = zero |
|---|
| 5394 | prod_m(:,:,:) = zero |
|---|
| 5395 | prod_l(:,:,:) = zero |
|---|
| 5396 | flux_s(:,:,:) = zero |
|---|
| 5397 | flux_m(:,:,:) = zero |
|---|
| 5398 | flux_l(:,:,:) = zero |
|---|
| 5399 | flux_prod_s(:,:) = zero |
|---|
| 5400 | flux_prod_m(:,:) = zero |
|---|
| 5401 | flux_prod_l(:,:) = zero |
|---|
| 5402 | |
|---|
| 5403 | ! n variables |
|---|
| 5404 | nstress_season(:,:) = zero |
|---|
| 5405 | soil_n_min(:,:,:) = zero |
|---|
| 5406 | plant_n_uptake_daily(:,:,:)=zero |
|---|
| 5407 | n_mineralisation_d(:,:)=zero |
|---|
| 5408 | |
|---|
| 5409 | END SUBROUTINE stomate_init |
|---|
| 5410 | |
|---|
| 5411 | |
|---|
| 5412 | !! ================================================================================================================================ |
|---|
| 5413 | !! SUBROUTINE : stomate_clear |
|---|
| 5414 | !! |
|---|
| 5415 | !>\BRIEF Deallocate memory of the stomate variables. |
|---|
| 5416 | !! |
|---|
| 5417 | !! DESCRIPTION : None |
|---|
| 5418 | !! |
|---|
| 5419 | !! RECENT CHANGE(S) : None |
|---|
| 5420 | !! |
|---|
| 5421 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 5422 | !! |
|---|
| 5423 | !! REFERENCES : None |
|---|
| 5424 | !! |
|---|
| 5425 | !! FLOWCHART : None |
|---|
| 5426 | !! \n |
|---|
| 5427 | !_ ================================================================================================================================ |
|---|
| 5428 | |
|---|
| 5429 | SUBROUTINE stomate_clear |
|---|
| 5430 | |
|---|
| 5431 | !! 1. Deallocate all dynamics variables |
|---|
| 5432 | |
|---|
| 5433 | IF (ALLOCATED(veget_cov_max)) DEALLOCATE(veget_cov_max) |
|---|
| 5434 | IF (ALLOCATED(adapted)) DEALLOCATE(adapted) |
|---|
| 5435 | IF (ALLOCATED(regenerate)) DEALLOCATE(regenerate) |
|---|
| 5436 | IF (ALLOCATED(humrel_daily)) DEALLOCATE(humrel_daily) |
|---|
| 5437 | IF (ALLOCATED(vir_humrel_daily)) DEALLOCATE(vir_humrel_daily) |
|---|
| 5438 | IF (ALLOCATED(transpir_supply_daily)) DEALLOCATE(transpir_supply_daily) |
|---|
| 5439 | IF (ALLOCATED(vir_transpir_supply_daily)) DEALLOCATE(vir_transpir_supply_daily) |
|---|
| 5440 | IF (ALLOCATED(transpir_daily)) DEALLOCATE(transpir_daily) |
|---|
| 5441 | IF (ALLOCATED(gdd_init_date)) DEALLOCATE(gdd_init_date) |
|---|
| 5442 | IF (ALLOCATED(litterhum_daily)) DEALLOCATE(litterhum_daily) |
|---|
| 5443 | IF (ALLOCATED(t2m_daily)) DEALLOCATE(t2m_daily) |
|---|
| 5444 | IF (ALLOCATED(t2m_min_daily)) DEALLOCATE(t2m_min_daily) |
|---|
| 5445 | IF (ALLOCATED(tsurf_daily)) DEALLOCATE(tsurf_daily) |
|---|
| 5446 | IF (ALLOCATED(tsoil_daily)) DEALLOCATE(tsoil_daily) |
|---|
| 5447 | IF (ALLOCATED(soilhum_daily)) DEALLOCATE(soilhum_daily) |
|---|
| 5448 | IF (ALLOCATED(precip_daily)) DEALLOCATE(precip_daily) |
|---|
| 5449 | IF (ALLOCATED(gpp_daily)) DEALLOCATE(gpp_daily) |
|---|
| 5450 | IF (ALLOCATED(npp_daily)) DEALLOCATE(npp_daily) |
|---|
| 5451 | IF (ALLOCATED(turnover_daily)) DEALLOCATE(turnover_daily) |
|---|
| 5452 | IF (ALLOCATED(turnover_littercalc)) DEALLOCATE(turnover_littercalc) |
|---|
| 5453 | IF (ALLOCATED(humrel_month)) DEALLOCATE(humrel_month) |
|---|
| 5454 | IF (ALLOCATED(humrel_week)) DEALLOCATE(humrel_week) |
|---|
| 5455 | IF (ALLOCATED(humrel_growingseason)) DEALLOCATE(humrel_growingseason) |
|---|
| 5456 | IF (ALLOCATED(vir_humrel_growingseason)) DEALLOCATE(vir_humrel_growingseason) |
|---|
| 5457 | IF (ALLOCATED(t2m_longterm)) DEALLOCATE(t2m_longterm) |
|---|
| 5458 | IF (ALLOCATED(t2m_month)) DEALLOCATE(t2m_month) |
|---|
| 5459 | IF (ALLOCATED(Tseason)) DEALLOCATE(Tseason) |
|---|
| 5460 | IF (ALLOCATED(Tseason_length)) DEALLOCATE(Tseason_length) |
|---|
| 5461 | IF (ALLOCATED(Tseason_tmp)) DEALLOCATE(Tseason_tmp) |
|---|
| 5462 | IF (ALLOCATED(Tmin_spring_time)) DEALLOCATE(Tmin_spring_time) |
|---|
| 5463 | IF (ALLOCATED(onset_date)) DEALLOCATE(onset_date) |
|---|
| 5464 | !!$ IF (ALLOCATED(begin_leaves)) DEALLOCATE(begin_leaves) |
|---|
| 5465 | IF (ALLOCATED(t2m_week)) DEALLOCATE(t2m_week) |
|---|
| 5466 | IF (ALLOCATED(tsoil_month)) DEALLOCATE(tsoil_month) |
|---|
| 5467 | IF (ALLOCATED(soilhum_month)) DEALLOCATE(soilhum_month) |
|---|
| 5468 | IF (ALLOCATED(fireindex)) DEALLOCATE(fireindex) |
|---|
| 5469 | IF (ALLOCATED(firelitter)) DEALLOCATE(firelitter) |
|---|
| 5470 | IF (ALLOCATED(maxhumrel_lastyear)) DEALLOCATE(maxhumrel_lastyear) |
|---|
| 5471 | IF (ALLOCATED(maxhumrel_thisyear)) DEALLOCATE(maxhumrel_thisyear) |
|---|
| 5472 | IF (ALLOCATED(minhumrel_lastyear)) DEALLOCATE(minhumrel_lastyear) |
|---|
| 5473 | IF (ALLOCATED(minhumrel_thisyear)) DEALLOCATE(minhumrel_thisyear) |
|---|
| 5474 | IF (ALLOCATED(maxgppweek_lastyear)) DEALLOCATE(maxgppweek_lastyear) |
|---|
| 5475 | IF (ALLOCATED(maxgppweek_thisyear)) DEALLOCATE(maxgppweek_thisyear) |
|---|
| 5476 | IF (ALLOCATED(gdd0_lastyear)) DEALLOCATE(gdd0_lastyear) |
|---|
| 5477 | IF (ALLOCATED(gdd0_thisyear)) DEALLOCATE(gdd0_thisyear) |
|---|
| 5478 | IF (ALLOCATED(precip_lastyear)) DEALLOCATE(precip_lastyear) |
|---|
| 5479 | IF (ALLOCATED(precip_thisyear)) DEALLOCATE(precip_thisyear) |
|---|
| 5480 | IF (ALLOCATED(gdd_m5_dormance)) DEALLOCATE(gdd_m5_dormance) |
|---|
| 5481 | IF (ALLOCATED(gdd_from_growthinit)) DEALLOCATE(gdd_from_growthinit) |
|---|
| 5482 | IF (ALLOCATED(gdd_midwinter)) DEALLOCATE(gdd_midwinter) |
|---|
| 5483 | IF (ALLOCATED(ncd_dormance)) DEALLOCATE(ncd_dormance) |
|---|
| 5484 | IF (ALLOCATED(ngd_minus5)) DEALLOCATE(ngd_minus5) |
|---|
| 5485 | IF (ALLOCATED(PFTpresent)) DEALLOCATE(PFTpresent) |
|---|
| 5486 | IF (ALLOCATED(npp_longterm)) DEALLOCATE(npp_longterm) |
|---|
| 5487 | IF (ALLOCATED(lm_lastyearmax)) DEALLOCATE(lm_lastyearmax) |
|---|
| 5488 | IF (ALLOCATED(lm_thisyearmax)) DEALLOCATE(lm_thisyearmax) |
|---|
| 5489 | IF (ALLOCATED(maxfpc_lastyear)) DEALLOCATE(maxfpc_lastyear) |
|---|
| 5490 | IF (ALLOCATED(maxfpc_thisyear)) DEALLOCATE(maxfpc_thisyear) |
|---|
| 5491 | IF (ALLOCATED(turnover_longterm)) DEALLOCATE(turnover_longterm) |
|---|
| 5492 | IF (ALLOCATED(gpp_week)) DEALLOCATE(gpp_week) |
|---|
| 5493 | IF (ALLOCATED(plant_status)) DEALLOCATE(plant_status) |
|---|
| 5494 | IF (ALLOCATED(when_growthinit)) DEALLOCATE(when_growthinit) |
|---|
| 5495 | IF (ALLOCATED(age)) DEALLOCATE(age) |
|---|
| 5496 | IF (ALLOCATED(resp_hetero_d)) DEALLOCATE(resp_hetero_d) |
|---|
| 5497 | IF (ALLOCATED(resp_hetero_radia)) DEALLOCATE(resp_hetero_radia) |
|---|
| 5498 | IF (ALLOCATED(resp_maint_d)) DEALLOCATE(resp_maint_d) |
|---|
| 5499 | IF (ALLOCATED(resp_growth_d)) DEALLOCATE(resp_growth_d) |
|---|
| 5500 | IF (ALLOCATED(co2_fire)) DEALLOCATE(co2_fire) |
|---|
| 5501 | !!$ IF (ALLOCATED(co2_to_bm_dgvm)) DEALLOCATE(co2_to_bm_dgvm) |
|---|
| 5502 | !!$ IF (ALLOCATED(n_to_bm)) DEALLOCATE(n_to_bm) |
|---|
| 5503 | IF (ALLOCATED(atm_to_bm)) DEALLOCATE(atm_to_bm) |
|---|
| 5504 | IF (ALLOCATED(veget_lastlight)) DEALLOCATE(veget_lastlight) |
|---|
| 5505 | IF (ALLOCATED(everywhere)) DEALLOCATE(everywhere) |
|---|
| 5506 | IF (ALLOCATED(need_adjacent)) DEALLOCATE(need_adjacent) |
|---|
| 5507 | IF (ALLOCATED(leaf_age)) DEALLOCATE(leaf_age) |
|---|
| 5508 | IF (ALLOCATED(leaf_frac)) DEALLOCATE(leaf_frac) |
|---|
| 5509 | IF (ALLOCATED(RIP_time)) DEALLOCATE(RIP_time) |
|---|
| 5510 | IF (ALLOCATED(time_hum_min)) DEALLOCATE(time_hum_min) |
|---|
| 5511 | IF (ALLOCATED(hum_min_dormance)) DEALLOCATE(hum_min_dormance) |
|---|
| 5512 | IF (ALLOCATED(litter)) DEALLOCATE(litter) |
|---|
| 5513 | IF (ALLOCATED(dead_leaves)) DEALLOCATE(dead_leaves) |
|---|
| 5514 | IF (ALLOCATED(som)) DEALLOCATE(som) |
|---|
| 5515 | IF (ALLOCATED(lignin_struc)) DEALLOCATE(lignin_struc) |
|---|
| 5516 | IF (ALLOCATED(lignin_wood)) DEALLOCATE(lignin_wood) |
|---|
| 5517 | IF (ALLOCATED(turnover_time)) DEALLOCATE(turnover_time) |
|---|
| 5518 | !!$ IF (ALLOCATED(co2_flux_daily)) DEALLOCATE(co2_flux_daily) |
|---|
| 5519 | !!$ IF (ALLOCATED(co2_flux_monthly)) DEALLOCATE(co2_flux_monthly) |
|---|
| 5520 | !!$ IF (ALLOCATED(harvest_above_monthly)) DEALLOCATE (harvest_above_monthly) |
|---|
| 5521 | !!$ IF (ALLOCATED(flux_prod_monthly)) DEALLOCATE (flux_prod_monthly) |
|---|
| 5522 | IF (ALLOCATED(bm_to_litter)) DEALLOCATE(bm_to_litter) |
|---|
| 5523 | IF (ALLOCATED(bm_to_littercalc)) DEALLOCATE(bm_to_littercalc) |
|---|
| 5524 | IF (ALLOCATED(herbivores)) DEALLOCATE(herbivores) |
|---|
| 5525 | IF (ALLOCATED(resp_maint_part_radia)) DEALLOCATE(resp_maint_part_radia) |
|---|
| 5526 | IF (ALLOCATED(resp_maint_radia)) DEALLOCATE(resp_maint_radia) |
|---|
| 5527 | IF (ALLOCATED(resp_maint_part)) DEALLOCATE(resp_maint_part) |
|---|
| 5528 | IF (ALLOCATED(hori_index)) DEALLOCATE(hori_index) |
|---|
| 5529 | IF (ALLOCATED(horipft_index)) DEALLOCATE(horipft_index) |
|---|
| 5530 | IF (ALLOCATED(horican_index)) DEALLOCATE(horican_index) |
|---|
| 5531 | IF (ALLOCATED(horicut_index)) DEALLOCATE(horicut_index) |
|---|
| 5532 | IF (ALLOCATED(horip_s_index)) DEALLOCATE (horip_s_index) |
|---|
| 5533 | IF (ALLOCATED(horip_m_index)) DEALLOCATE (horip_m_index) |
|---|
| 5534 | IF (ALLOCATED(horip_l_index)) DEALLOCATE (horip_l_index) |
|---|
| 5535 | IF (ALLOCATED(horip_ss_index)) DEALLOCATE (horip_ss_index) |
|---|
| 5536 | IF (ALLOCATED(horip_mm_index)) DEALLOCATE (horip_mm_index) |
|---|
| 5537 | IF (ALLOCATED(horip_ll_index)) DEALLOCATE (horip_ll_index) |
|---|
| 5538 | IF (ALLOCATED(clay_fm)) DEALLOCATE(clay_fm) |
|---|
| 5539 | IF (ALLOCATED(silt_fm)) DEALLOCATE(silt_fm) |
|---|
| 5540 | IF (ALLOCATED(bulk_fm)) DEALLOCATE(bulk_fm) |
|---|
| 5541 | IF (ALLOCATED(humrel_daily_fm)) DEALLOCATE(humrel_daily_fm) |
|---|
| 5542 | IF (ALLOCATED(litterhum_daily_fm)) DEALLOCATE(litterhum_daily_fm) |
|---|
| 5543 | IF (ALLOCATED(t2m_daily_fm)) DEALLOCATE(t2m_daily_fm) |
|---|
| 5544 | IF (ALLOCATED(t2m_min_daily_fm)) DEALLOCATE(t2m_min_daily_fm) |
|---|
| 5545 | IF (ALLOCATED(tsurf_daily_fm)) DEALLOCATE(tsurf_daily_fm) |
|---|
| 5546 | IF (ALLOCATED(tsoil_daily_fm)) DEALLOCATE(tsoil_daily_fm) |
|---|
| 5547 | IF (ALLOCATED(soilhum_daily_fm)) DEALLOCATE(soilhum_daily_fm) |
|---|
| 5548 | IF (ALLOCATED(precip_fm)) DEALLOCATE(precip_fm) |
|---|
| 5549 | IF (ALLOCATED(gpp_daily_fm)) DEALLOCATE(gpp_daily_fm) |
|---|
| 5550 | IF (ALLOCATED(veget_fm)) DEALLOCATE(veget_fm) |
|---|
| 5551 | IF (ALLOCATED(veget_max_fm)) DEALLOCATE(veget_max_fm) |
|---|
| 5552 | IF (ALLOCATED(drainage_fm)) DEALLOCATE(drainage_fm) |
|---|
| 5553 | ! |
|---|
| 5554 | IF (ALLOCATED(ok_equilibrium)) DEALLOCATE(ok_equilibrium) |
|---|
| 5555 | IF (ALLOCATED(carbon_eq)) DEALLOCATE(carbon_eq) |
|---|
| 5556 | IF (ALLOCATED(matrixA)) DEALLOCATE(matrixA) |
|---|
| 5557 | IF (ALLOCATED(vectorB)) DEALLOCATE(vectorB) |
|---|
| 5558 | IF (ALLOCATED(matrixV)) DEALLOCATE(matrixV) |
|---|
| 5559 | IF (ALLOCATED(vectorU)) DEALLOCATE(vectorU) |
|---|
| 5560 | IF (ALLOCATED(matrixW)) DEALLOCATE(matrixW) |
|---|
| 5561 | IF (ALLOCATED(previous_stock)) DEALLOCATE(previous_stock) |
|---|
| 5562 | IF (ALLOCATED(current_stock)) DEALLOCATE(current_stock) |
|---|
| 5563 | IF (ALLOCATED(sigma)) DEALLOCATE (sigma) |
|---|
| 5564 | IF (ALLOCATED(age_stand)) DEALLOCATE (age_stand) |
|---|
| 5565 | IF (ALLOCATED(rotation_n)) DEALLOCATE (rotation_n) |
|---|
| 5566 | IF (ALLOCATED(last_cut)) DEALLOCATE (last_cut) |
|---|
| 5567 | IF (ALLOCATED(CN_som_litter_longterm)) DEALLOCATE(CN_som_litter_longterm) |
|---|
| 5568 | IF (ALLOCATED(KF)) DEALLOCATE (KF) |
|---|
| 5569 | IF (ALLOCATED(k_latosa_adapt)) DEALLOCATE (k_latosa_adapt) |
|---|
| 5570 | IF (ALLOCATED(harvest_pool)) DEALLOCATE (harvest_pool) |
|---|
| 5571 | IF (ALLOCATED(harvest_type)) DEALLOCATE (harvest_type) |
|---|
| 5572 | IF (ALLOCATED(harvest_cut)) DEALLOCATE (harvest_cut) |
|---|
| 5573 | IF (ALLOCATED(harvest_area)) DEALLOCATE (harvest_area) |
|---|
| 5574 | IF (ALLOCATED(harvest_5y_area)) DEALLOCATE (harvest_5y_area) |
|---|
| 5575 | IF (ALLOCATED(harvest_pool_bound)) DEALLOCATE (harvest_pool_bound) |
|---|
| 5576 | IF (ALLOCATED(prod_s)) DEALLOCATE (prod_s) |
|---|
| 5577 | IF (ALLOCATED(prod_m)) DEALLOCATE (prod_m) |
|---|
| 5578 | IF (ALLOCATED(prod_l)) DEALLOCATE (prod_l) |
|---|
| 5579 | IF (ALLOCATED(flux_s)) DEALLOCATE (flux_s) |
|---|
| 5580 | IF (ALLOCATED(flux_m)) DEALLOCATE (flux_m) |
|---|
| 5581 | IF (ALLOCATED(flux_l)) DEALLOCATE (flux_l) |
|---|
| 5582 | IF (ALLOCATED(flux_prod_s)) DEALLOCATE (flux_prod_s) |
|---|
| 5583 | IF (ALLOCATED(flux_prod_m)) DEALLOCATE (flux_prod_m) |
|---|
| 5584 | IF (ALLOCATED(flux_prod_l)) DEALLOCATE (flux_prod_l) |
|---|
| 5585 | |
|---|
| 5586 | IF (ALLOCATED(mai)) DEALLOCATE (mai) |
|---|
| 5587 | IF (ALLOCATED(pai)) DEALLOCATE (pai) |
|---|
| 5588 | IF (ALLOCATED(previous_wood_volume)) DEALLOCATE (previous_wood_volume) |
|---|
| 5589 | IF (ALLOCATED(mai_count)) DEALLOCATE (mai_count) |
|---|
| 5590 | IF (ALLOCATED(coppice_dens)) DEALLOCATE (coppice_dens) |
|---|
| 5591 | IF (ALLOCATED(litter_demand)) DEALLOCATE (litter_demand) |
|---|
| 5592 | IF (ALLOCATED(wstress_season)) DEALLOCATE (wstress_season) |
|---|
| 5593 | IF (ALLOCATED(wstress_month)) DEALLOCATE (wstress_month) |
|---|
| 5594 | IF (ALLOCATED(rue_longterm)) DEALLOCATE (rue_longterm) |
|---|
| 5595 | IF (ALLOCATED(nbp_accu)) DEALLOCATE(nbp_accu) |
|---|
| 5596 | IF (ALLOCATED(nbp_accu_pool)) DEALLOCATE(nbp_accu_pool) |
|---|
| 5597 | IF (ALLOCATED(nbp_flux)) DEALLOCATE(nbp_flux) |
|---|
| 5598 | IF (ALLOCATED(nbp_pool)) DEALLOCATE(nbp_pool) |
|---|
| 5599 | IF (ALLOCATED(nbp_pool_start)) DEALLOCATE(nbp_pool_start) |
|---|
| 5600 | IF (ALLOCATED(nbp_pool_end)) DEALLOCATE(nbp_pool_end) |
|---|
| 5601 | |
|---|
| 5602 | IF (ALLOCATED(clay_fm_g)) DEALLOCATE(clay_fm_g) |
|---|
| 5603 | IF (ALLOCATED(silt_fm_g)) DEALLOCATE(silt_fm_g) |
|---|
| 5604 | IF (ALLOCATED(bulk_fm_g)) DEALLOCATE(bulk_fm_g) |
|---|
| 5605 | IF (ALLOCATED(humrel_daily_fm_g)) DEALLOCATE(humrel_daily_fm_g) |
|---|
| 5606 | IF (ALLOCATED(litterhum_daily_fm_g)) DEALLOCATE(litterhum_daily_fm_g) |
|---|
| 5607 | IF (ALLOCATED(t2m_daily_fm_g)) DEALLOCATE(t2m_daily_fm_g) |
|---|
| 5608 | IF (ALLOCATED(t2m_min_daily_fm_g)) DEALLOCATE(t2m_min_daily_fm_g) |
|---|
| 5609 | IF (ALLOCATED(tsurf_daily_fm_g)) DEALLOCATE(tsurf_daily_fm_g) |
|---|
| 5610 | IF (ALLOCATED(tsoil_daily_fm_g)) DEALLOCATE(tsoil_daily_fm_g) |
|---|
| 5611 | IF (ALLOCATED(soilhum_daily_fm_g)) DEALLOCATE(soilhum_daily_fm_g) |
|---|
| 5612 | IF (ALLOCATED(precip_fm_g)) DEALLOCATE(precip_fm_g) |
|---|
| 5613 | IF (ALLOCATED(gpp_daily_fm_g)) DEALLOCATE(gpp_daily_fm_g) |
|---|
| 5614 | IF (ALLOCATED(veget_fm_g)) DEALLOCATE(veget_fm_g) |
|---|
| 5615 | IF (ALLOCATED(veget_max_fm_g)) DEALLOCATE(veget_max_fm_g) |
|---|
| 5616 | !!$ IF (ALLOCATED(lai_fm_g)) DEALLOCATE(lai_fm_g) |
|---|
| 5617 | IF (ALLOCATED(drainage_fm_g)) DEALLOCATE(drainage_fm_g) |
|---|
| 5618 | |
|---|
| 5619 | IF (ALLOCATED(isf)) DEALLOCATE(isf) |
|---|
| 5620 | IF (ALLOCATED(nf_written)) DEALLOCATE(nf_written) |
|---|
| 5621 | IF (ALLOCATED(nf_cumul)) DEALLOCATE(nf_cumul) |
|---|
| 5622 | IF (ALLOCATED(nforce)) DEALLOCATE(nforce) |
|---|
| 5623 | IF (ALLOCATED(control_moist)) DEALLOCATE(control_moist) |
|---|
| 5624 | IF (ALLOCATED(control_temp)) DEALLOCATE(control_temp) |
|---|
| 5625 | IF (ALLOCATED(carbon_input)) DEALLOCATE(carbon_input) |
|---|
| 5626 | IF (ALLOCATED(nitrogen_input)) DEALLOCATE(nitrogen_input) |
|---|
| 5627 | IF ( ALLOCATED (som_input_daily)) DEALLOCATE (som_input_daily) |
|---|
| 5628 | IF ( ALLOCATED (control_temp_daily)) DEALLOCATE (control_temp_daily) |
|---|
| 5629 | IF ( ALLOCATED (control_moist_daily)) DEALLOCATE (control_moist_daily) |
|---|
| 5630 | |
|---|
| 5631 | IF ( ALLOCATED (drainage_daily)) DEALLOCATE(drainage_daily) |
|---|
| 5632 | IF ( ALLOCATED (plant_n_uptake_daily)) DEALLOCATE(plant_n_uptake_daily) |
|---|
| 5633 | IF ( ALLOCATED (n_mineralisation_d)) DEALLOCATE(n_mineralisation_d) |
|---|
| 5634 | IF ( ALLOCATED (cn_leaf_min_season)) DEALLOCATE (cn_leaf_min_season) |
|---|
| 5635 | IF ( ALLOCATED (nstress_season)) DEALLOCATE (nstress_season) |
|---|
| 5636 | IF ( ALLOCATED (soil_n_min)) DEALLOCATE (soil_n_min) |
|---|
| 5637 | IF ( ALLOCATED (p_O2)) DEALLOCATE (p_O2) |
|---|
| 5638 | IF ( ALLOCATED (bact)) DEALLOCATE (bact) |
|---|
| 5639 | IF ( ALLOCATED (fpc_max)) DEALLOCATE (fpc_max) |
|---|
| 5640 | |
|---|
| 5641 | IF (ALLOCATED(forest_managed)) DEALLOCATE (forest_managed) |
|---|
| 5642 | IF (ALLOCATED(forest_managed_lastyear)) DEALLOCATE (forest_managed_lastyear) |
|---|
| 5643 | IF (ALLOCATED(species_change_map)) DEALLOCATE (species_change_map) |
|---|
| 5644 | IF (ALLOCATED(fm_change_map)) DEALLOCATE (fm_change_map) |
|---|
| 5645 | IF (ALLOCATED(lpft_replant)) DEALLOCATE (lpft_replant) |
|---|
| 5646 | |
|---|
| 5647 | !! 2. reset l_first |
|---|
| 5648 | |
|---|
| 5649 | l_first_stomate=.TRUE. |
|---|
| 5650 | |
|---|
| 5651 | !! 3. call to clear functions |
|---|
| 5652 | |
|---|
| 5653 | !!$ CALL get_reftemp_clear |
|---|
| 5654 | CALL season_clear |
|---|
| 5655 | CALL stomate_lpj_clear |
|---|
| 5656 | CALL littercalc_clear |
|---|
| 5657 | CALL vmax_clear |
|---|
| 5658 | |
|---|
| 5659 | END SUBROUTINE stomate_clear |
|---|
| 5660 | |
|---|
| 5661 | |
|---|
| 5662 | !! ================================================================================================================================ |
|---|
| 5663 | !! SUBROUTINE : stomate_var_init |
|---|
| 5664 | !! |
|---|
| 5665 | !>\BRIEF Initialize variables of stomate with a none-zero initial value. |
|---|
| 5666 | !! Subroutine is called only if ::ok_stomate = .TRUE. STOMATE diagnoses some |
|---|
| 5667 | !! variables for SECHIBA : assim_param, deadleaf_cover, etc. These variables can |
|---|
| 5668 | !! be recalculated from STOMATE's prognostic variables. Note that height is |
|---|
| 5669 | !! saved in SECHIBA. |
|---|
| 5670 | !! |
|---|
| 5671 | !! DESCRIPTION : None |
|---|
| 5672 | !! |
|---|
| 5673 | !! RECENT CHANGE(S) : None |
|---|
| 5674 | !! |
|---|
| 5675 | !! MAIN OUTPUT VARIABLE(S): leaf age (::leaf_age) and fraction of leaves in leaf |
|---|
| 5676 | !! age class (::leaf_frac). The maximum water on vegetation available for |
|---|
| 5677 | !! interception, fraction of soil covered by dead leaves |
|---|
| 5678 | !! (::deadleaf_cover) and assimilation parameters (:: assim_param). |
|---|
| 5679 | !! |
|---|
| 5680 | !! REFERENCE(S) : None |
|---|
| 5681 | !! |
|---|
| 5682 | !! FLOWCHART : None |
|---|
| 5683 | !! \n |
|---|
| 5684 | !_ ================================================================================================================================ |
|---|
| 5685 | |
|---|
| 5686 | SUBROUTINE stomate_var_init & |
|---|
| 5687 | & (kjpindex, veget_cov_max, leaf_age, leaf_frac, & |
|---|
| 5688 | & dead_leaves, & |
|---|
| 5689 | & veget_cov, deadleaf_cover, assim_param, & |
|---|
| 5690 | & circ_class_biomass, circ_class_n) |
|---|
| 5691 | |
|---|
| 5692 | |
|---|
| 5693 | !! 0. Variable and parameter declaration |
|---|
| 5694 | |
|---|
| 5695 | !! 0.1 Input variables |
|---|
| 5696 | |
|---|
| 5697 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only |
|---|
| 5698 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_cov !! Fraction of pixel covered by PFT. Fraction |
|---|
| 5699 | !! accounts for none-biological land covers |
|---|
| 5700 | !! (unitless) |
|---|
| 5701 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_cov_max !! Fractional coverage: maximum share of the pixel |
|---|
| 5702 | !! covered by a PFT (unitless) |
|---|
| 5703 | REAL(r_std),DIMENSION(kjpindex,nvm,nlitt),INTENT(in) :: dead_leaves !! Metabolic and structural fraction of dead leaves |
|---|
| 5704 | !! per ground area |
|---|
| 5705 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 5706 | REAL(r_std), DIMENSION(kjpindex,nvm,ncirc,nparts,nelements),INTENT(in) :: circ_class_biomass !! @tex $(gC m^{-2})$ @endtex |
|---|
| 5707 | |
|---|
| 5708 | REAL(r_std), DIMENSION(kjpindex,nvm,ncirc),INTENT(in) :: circ_class_n !! @tex $(gC m^{-2})$ @endtex |
|---|
| 5709 | |
|---|
| 5710 | |
|---|
| 5711 | !! 0.2 Modified variables |
|---|
| 5712 | |
|---|
| 5713 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages),INTENT(inout) :: leaf_age !! Age of different leaf classes per PFT (days) |
|---|
| 5714 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages),INTENT(inout) :: leaf_frac !! Fraction of leaves in leaf age class per PFT |
|---|
| 5715 | !! (unitless; 1) |
|---|
| 5716 | |
|---|
| 5717 | !! 0.3 Output variables |
|---|
| 5718 | |
|---|
| 5719 | REAL(r_std),DIMENSION(kjpindex), INTENT (out) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 5720 | !! (unitless) |
|---|
| 5721 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(out) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 5722 | !! photosynthesis |
|---|
| 5723 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 5724 | ! 0.4 Local variables |
|---|
| 5725 | |
|---|
| 5726 | REAL(r_std),PARAMETER :: dt_0 = zero !! Dummy time step, must be zero |
|---|
| 5727 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Dummy vcmax |
|---|
| 5728 | !! @tex $(\mu mol m^{-2} s^{-1})$ @endtex |
|---|
| 5729 | |
|---|
| 5730 | REAL(r_std),DIMENSION(kjpindex,nvm) :: nue !! Nitrogen use Efficiency with impact of leaf age (umol CO2 (gN)-1 s-1) |
|---|
| 5731 | !! @tex $(\mu mol m^{-2} s^{-1})$ @endtex |
|---|
| 5732 | INTEGER(i_std) :: j !! Index (untiless) |
|---|
| 5733 | |
|---|
| 5734 | !_ ================================================================================================================================ |
|---|
| 5735 | |
|---|
| 5736 | ! Only if stomate is activated |
|---|
| 5737 | IF (printlev>=4) WRITE(numout,*) 'Entering stomate_var_init' |
|---|
| 5738 | |
|---|
| 5739 | !! 1. photosynthesis parameters |
|---|
| 5740 | |
|---|
| 5741 | !! 1.1 vcmax (stomate_vmax.f90) |
|---|
| 5742 | CALL vmax (kjpindex, dt_0, leaf_age, leaf_frac, vcmax, nue ) |
|---|
| 5743 | |
|---|
| 5744 | IF (printlev_loc>=4) THEN |
|---|
| 5745 | WRITE(numout,*) 'vcmax, ', vcmax |
|---|
| 5746 | WRITE(numout,*) 'nue, ', nue |
|---|
| 5747 | ENDIF |
|---|
| 5748 | |
|---|
| 5749 | !! 1.3 transform into nvm vegetation types |
|---|
| 5750 | assim_param(:,:,ivcmax) = zero |
|---|
| 5751 | assim_param(:,:,inue) = zero |
|---|
| 5752 | assim_param(:,:,ileafN) = zero |
|---|
| 5753 | DO j = 2, nvm |
|---|
| 5754 | assim_param(:,j,ivcmax)=vcmax(:,j) |
|---|
| 5755 | assim_param(:,j,inue)=nue(:,j) |
|---|
| 5756 | assim_param(:,j,ileafN)=SUM(circ_class_biomass(:,j,:,ileaf,initrogen)*circ_class_n(:,j,:),2) |
|---|
| 5757 | ENDDO |
|---|
| 5758 | |
|---|
| 5759 | !! 2. Dead leaf cover (stomate_litter.f90) |
|---|
| 5760 | |
|---|
| 5761 | CALL deadleaf (kjpindex, veget_cov_max, dead_leaves, deadleaf_cover) |
|---|
| 5762 | |
|---|
| 5763 | END SUBROUTINE stomate_var_init |
|---|
| 5764 | |
|---|
| 5765 | |
|---|
| 5766 | !! ================================================================================================================================ |
|---|
| 5767 | !! INTERFACE : stomate_accu |
|---|
| 5768 | !! |
|---|
| 5769 | !>\BRIEF Accumulate a variable for the time period specified by |
|---|
| 5770 | !! dt_sechiba or calculate the mean value over the period of dt_stomate. |
|---|
| 5771 | !! |
|---|
| 5772 | !! DESCRIPTION : Accumulate a variable for the time period specified by |
|---|
| 5773 | !! dt_sechiba or calculate the mean value over the period of dt_stomate. |
|---|
| 5774 | !! stomate_accu interface can be used for variables having 1, 2 or 3 dimensions. |
|---|
| 5775 | !! The corresponding subruoutine stomate_accu_r1d, stomate_accu_r2d or |
|---|
| 5776 | !! stomate_accu_r3d will be selected through the interface depending on the number of dimensions. |
|---|
| 5777 | !! |
|---|
| 5778 | !! RECENT CHANGE(S) : None |
|---|
| 5779 | !! |
|---|
| 5780 | !! MAIN OUTPUT VARIABLE(S): accumulated or mean variable ::field_out:: |
|---|
| 5781 | !! |
|---|
| 5782 | !! REFERENCE(S) : None |
|---|
| 5783 | !! |
|---|
| 5784 | !! FLOWCHART : None |
|---|
| 5785 | !! \n |
|---|
| 5786 | !_ ================================================================================================================================ |
|---|
| 5787 | |
|---|
| 5788 | SUBROUTINE stomate_accu_r1d (ldmean, field_in, field_out) |
|---|
| 5789 | |
|---|
| 5790 | !! 0. Variable and parameter declaration |
|---|
| 5791 | |
|---|
| 5792 | !! 0.1 Input variables |
|---|
| 5793 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 5794 | REAL(r_std),DIMENSION(:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 5795 | |
|---|
| 5796 | !! 0.2 Modified variables |
|---|
| 5797 | REAL(r_std),DIMENSION(:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 5798 | |
|---|
| 5799 | !_ ================================================================================================================================ |
|---|
| 5800 | |
|---|
| 5801 | !! 1. Accumulate field |
|---|
| 5802 | |
|---|
| 5803 | field_out(:) = field_out(:)+field_in(:)*dt_sechiba |
|---|
| 5804 | |
|---|
| 5805 | !! 2. Mean fields |
|---|
| 5806 | IF (ldmean) THEN |
|---|
| 5807 | field_out(:) = field_out(:)/dt_stomate |
|---|
| 5808 | ENDIF |
|---|
| 5809 | |
|---|
| 5810 | END SUBROUTINE stomate_accu_r1d |
|---|
| 5811 | |
|---|
| 5812 | SUBROUTINE stomate_accu_r2d (ldmean, field_in, field_out) |
|---|
| 5813 | |
|---|
| 5814 | !! 0. Variable and parameter declaration |
|---|
| 5815 | |
|---|
| 5816 | !! 0.1 Input variables |
|---|
| 5817 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 5818 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 5819 | |
|---|
| 5820 | !! 0.2 Modified variables |
|---|
| 5821 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 5822 | |
|---|
| 5823 | !_ ================================================================================================================================ |
|---|
| 5824 | |
|---|
| 5825 | !! 1. Accumulate field |
|---|
| 5826 | |
|---|
| 5827 | field_out(:,:) = field_out(:,:)+field_in(:,:)*dt_sechiba |
|---|
| 5828 | |
|---|
| 5829 | !! 2. Mean fields |
|---|
| 5830 | IF (ldmean) THEN |
|---|
| 5831 | field_out(:,:) = field_out(:,:)/dt_stomate |
|---|
| 5832 | ENDIF |
|---|
| 5833 | |
|---|
| 5834 | END SUBROUTINE stomate_accu_r2d |
|---|
| 5835 | |
|---|
| 5836 | SUBROUTINE stomate_accu_r3d (ldmean, field_in, field_out) |
|---|
| 5837 | |
|---|
| 5838 | !! 0. Variable and parameter declaration |
|---|
| 5839 | |
|---|
| 5840 | !! 0.1 Input variables |
|---|
| 5841 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 5842 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 5843 | |
|---|
| 5844 | !! 0.2 Modified variables |
|---|
| 5845 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 5846 | |
|---|
| 5847 | !_ ================================================================================================================================ |
|---|
| 5848 | |
|---|
| 5849 | !! 1. Accumulate field |
|---|
| 5850 | |
|---|
| 5851 | field_out(:,:,:) = field_out(:,:,:)+field_in(:,:,:)*dt_sechiba |
|---|
| 5852 | |
|---|
| 5853 | !! 2. Mean fields |
|---|
| 5854 | |
|---|
| 5855 | IF (ldmean) THEN |
|---|
| 5856 | field_out(:,:,:) = field_out(:,:,:)/dt_stomate |
|---|
| 5857 | ENDIF |
|---|
| 5858 | |
|---|
| 5859 | END SUBROUTINE stomate_accu_r3d |
|---|
| 5860 | |
|---|
| 5861 | SUBROUTINE stomate_accu_r4d (ldmean, field_in, field_out) |
|---|
| 5862 | |
|---|
| 5863 | !! 0. Variable and parameter declaration |
|---|
| 5864 | |
|---|
| 5865 | !! 0.1 Input variables |
|---|
| 5866 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 5867 | REAL(r_std),DIMENSION(:,:,:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 5868 | |
|---|
| 5869 | !! 0.2 Modified variables |
|---|
| 5870 | REAL(r_std),DIMENSION(:,:,:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 5871 | |
|---|
| 5872 | !_ ================================================================================================================================ |
|---|
| 5873 | |
|---|
| 5874 | !! 1. Accumulate field |
|---|
| 5875 | |
|---|
| 5876 | field_out(:,:,:,:) = field_out(:,:,:,:)+field_in(:,:,:,:)*dt_sechiba |
|---|
| 5877 | |
|---|
| 5878 | !! 2. Mean fields |
|---|
| 5879 | |
|---|
| 5880 | IF (ldmean) THEN |
|---|
| 5881 | field_out(:,:,:,:) = field_out(:,:,:,:)/dt_stomate |
|---|
| 5882 | ENDIF |
|---|
| 5883 | |
|---|
| 5884 | END SUBROUTINE stomate_accu_r4d |
|---|
| 5885 | |
|---|
| 5886 | !! ================================================================================================================================ |
|---|
| 5887 | !! SUBROUTINE : stomate_veget_update |
|---|
| 5888 | !! |
|---|
| 5889 | !>\BRIEF After the vegetation has been updated some variables needs to be reinitialized for too small fractions |
|---|
| 5890 | !! |
|---|
| 5891 | !! DESCRIPTION : After the vegetation has been updated some variables needs to be reinitialized for too small fractions. |
|---|
| 5892 | !! This subroutine is called from slowproc_veget after removing to small fractions. |
|---|
| 5893 | !! |
|---|
| 5894 | !! RECENT CHANGE(S) : These calculations were previously done in stomate_lcchange |
|---|
| 5895 | !! |
|---|
| 5896 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 5897 | !! |
|---|
| 5898 | !! REFERENCE(S) : None |
|---|
| 5899 | !! |
|---|
| 5900 | !! FLOWCHART : None |
|---|
| 5901 | !! \n |
|---|
| 5902 | !_ ================================================================================================================================ |
|---|
| 5903 | |
|---|
| 5904 | SUBROUTINE stomate_veget_update(kjpindex, veget_max) |
|---|
| 5905 | |
|---|
| 5906 | !! 0. Variable and parameter declaration |
|---|
| 5907 | !! 0.1 Input variables |
|---|
| 5908 | INTEGER(i_std),INTENT(in) :: kjpindex !! Local domain size - terrestrial pixels only (unitless) |
|---|
| 5909 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 5910 | !! non-biological fraction (unitless) |
|---|
| 5911 | !! 0.3 Local variables |
|---|
| 5912 | INTEGER(i_std) :: i, j !! Indices |
|---|
| 5913 | |
|---|
| 5914 | ! Only proceed if the initalization of stomate has been done |
|---|
| 5915 | IF (.NOT. l_first_stomate) THEN |
|---|
| 5916 | |
|---|
| 5917 | ! Loop over all points on all pft's |
|---|
| 5918 | ! If the fraction is too small, reset the depending variables |
|---|
| 5919 | ! veget_max will be changed in slowproc_veget after this subroutine has been done. |
|---|
| 5920 | DO i = 1, kjpindex |
|---|
| 5921 | DO j=1, nvm |
|---|
| 5922 | IF ( veget_max(i,j) < min_vegfrac ) THEN |
|---|
| 5923 | PFTpresent(i,j) = .FALSE. |
|---|
| 5924 | plant_status(i,j) = idormant |
|---|
| 5925 | age(i,j) = zero |
|---|
| 5926 | when_growthinit(i,j) = undef |
|---|
| 5927 | everywhere(i,j) = zero |
|---|
| 5928 | som(i,:,j,:) = zero |
|---|
| 5929 | litter(i,:,j,:,:) = zero |
|---|
| 5930 | bm_to_litter(i,j,:,:) = zero |
|---|
| 5931 | turnover_daily(i,j,:,:) = zero |
|---|
| 5932 | ENDIF |
|---|
| 5933 | END DO |
|---|
| 5934 | END DO |
|---|
| 5935 | END IF |
|---|
| 5936 | |
|---|
| 5937 | END SUBROUTINE stomate_veget_update |
|---|
| 5938 | |
|---|
| 5939 | !! ================================================================================================================================ |
|---|
| 5940 | !! SUBROUTINE : init_forcing |
|---|
| 5941 | !! |
|---|
| 5942 | !>\BRIEF Allocate memory for the variables containing the forcing data. |
|---|
| 5943 | !! The maximum size of the allocated memory is specified in run definition file |
|---|
| 5944 | !! (::max_totsize) and needs to be a compromise between charging the memory and |
|---|
| 5945 | !! accessing disks to get the forcing data. |
|---|
| 5946 | !! |
|---|
| 5947 | !! DESCRIPTION : None |
|---|
| 5948 | !! |
|---|
| 5949 | !! RECENT CHANGE(S) : None |
|---|
| 5950 | !! |
|---|
| 5951 | !! MAIN OUTPUT VARIABLE(S): Strictly speaking the subroutine has no output |
|---|
| 5952 | !! variables. However, the routine allocates memory for later use. |
|---|
| 5953 | !! |
|---|
| 5954 | !! REFERENCE(S) : None |
|---|
| 5955 | !! |
|---|
| 5956 | !! FLOWCHART : None |
|---|
| 5957 | !! \n |
|---|
| 5958 | !_ ================================================================================================================================ |
|---|
| 5959 | |
|---|
| 5960 | SUBROUTINE init_forcing (kjpindex,nsfm,nsft_loc) |
|---|
| 5961 | |
|---|
| 5962 | !! 0. Variable and parameter declaration |
|---|
| 5963 | |
|---|
| 5964 | !! 0.1 Input variables |
|---|
| 5965 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 5966 | INTEGER(i_std),INTENT(in) :: nsfm !! Number of time steps that can be stored in memory (unitless) |
|---|
| 5967 | INTEGER(i_std),INTENT(in) :: nsft_loc !! Number of time steps in a year (unitless) |
|---|
| 5968 | |
|---|
| 5969 | !! 0.2 Output variables |
|---|
| 5970 | |
|---|
| 5971 | !! 0.3 Modified variables |
|---|
| 5972 | |
|---|
| 5973 | !! 0.4 Local variables |
|---|
| 5974 | |
|---|
| 5975 | LOGICAL :: l_error !! Check errors in netcdf call |
|---|
| 5976 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 5977 | !_ ================================================================================================================================ |
|---|
| 5978 | |
|---|
| 5979 | !! 1. Allocate memory |
|---|
| 5980 | |
|---|
| 5981 | ! Note ::nvm is number of PFTs and ::nbdl is number of soil layers |
|---|
| 5982 | l_error = .FALSE. |
|---|
| 5983 | ALLOCATE(clay_fm(kjpindex,nsfm),stat=ier) |
|---|
| 5984 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5985 | IF (l_error) THEN |
|---|
| 5986 | WRITE(numout,*) 'Problem with memory allocation: forcing variables clay_fm ',kjpindex,nsfm |
|---|
| 5987 | STOP 'init_forcing' |
|---|
| 5988 | ENDIF |
|---|
| 5989 | |
|---|
| 5990 | ALLOCATE(silt_fm(kjpindex,nsfm),stat=ier) |
|---|
| 5991 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5992 | IF (l_error) THEN |
|---|
| 5993 | WRITE(numout,*) 'Problem with memory allocation: forcing variables silt_fm ',kjpindex,nsfm |
|---|
| 5994 | STOP 'init_forcing' |
|---|
| 5995 | ENDIF |
|---|
| 5996 | ALLOCATE(bulk_fm(kjpindex,nsfm),stat=ier) |
|---|
| 5997 | l_error = l_error .OR. (ier /= 0) |
|---|
| 5998 | IF (l_error) THEN |
|---|
| 5999 | WRITE(numout,*) 'Problem with memory allocation: forcing variables bulk_fm ',kjpindex,nsfm |
|---|
| 6000 | STOP 'init_forcing' |
|---|
| 6001 | ENDIF |
|---|
| 6002 | |
|---|
| 6003 | ALLOCATE(humrel_daily_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6004 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6005 | IF (l_error) THEN |
|---|
| 6006 | WRITE(numout,*) 'Problem with memory allocation: forcing variables humrel_daily_fm ',kjpindex,nvm,nsfm |
|---|
| 6007 | STOP 'init_forcing' |
|---|
| 6008 | ENDIF |
|---|
| 6009 | ALLOCATE(litterhum_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 6010 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6011 | IF (l_error) THEN |
|---|
| 6012 | WRITE(numout,*) 'Problem with memory allocation: forcing variables litterhum_daily_fm ',kjpindex,nsfm |
|---|
| 6013 | STOP 'init_forcing' |
|---|
| 6014 | ENDIF |
|---|
| 6015 | ALLOCATE(t2m_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 6016 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6017 | IF (l_error) THEN |
|---|
| 6018 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_daily_fm ',kjpindex,nsfm |
|---|
| 6019 | STOP 'init_forcing' |
|---|
| 6020 | ENDIF |
|---|
| 6021 | ALLOCATE(t2m_min_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 6022 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6023 | IF (l_error) THEN |
|---|
| 6024 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_min_daily_fm ',kjpindex,nsfm |
|---|
| 6025 | STOP 'init_forcing' |
|---|
| 6026 | ENDIF |
|---|
| 6027 | ALLOCATE(tsurf_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 6028 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6029 | IF (l_error) THEN |
|---|
| 6030 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsurf_daily_fm ',kjpindex,nsfm |
|---|
| 6031 | STOP 'init_forcing' |
|---|
| 6032 | ENDIF |
|---|
| 6033 | ALLOCATE(tsoil_daily_fm(kjpindex,nbdl,nsfm),stat=ier) |
|---|
| 6034 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6035 | IF (l_error) THEN |
|---|
| 6036 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsoil_daily_fm ',kjpindex,nbdl,nsfm |
|---|
| 6037 | STOP 'init_forcing' |
|---|
| 6038 | ENDIF |
|---|
| 6039 | ALLOCATE(soilhum_daily_fm(kjpindex,nbdl,nsfm),stat=ier) |
|---|
| 6040 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6041 | IF (l_error) THEN |
|---|
| 6042 | WRITE(numout,*) 'Problem with memory allocation: forcing variables soilhum_daily_fm ',kjpindex,nbdl,nsfm |
|---|
| 6043 | STOP 'init_forcing' |
|---|
| 6044 | ENDIF |
|---|
| 6045 | ALLOCATE(precip_fm(kjpindex,nsfm),stat=ier) |
|---|
| 6046 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6047 | IF (l_error) THEN |
|---|
| 6048 | WRITE(numout,*) 'Problem with memory allocation: forcing variables precip_fm ',kjpindex,nsfm |
|---|
| 6049 | STOP 'init_forcing' |
|---|
| 6050 | ENDIF |
|---|
| 6051 | ALLOCATE(gpp_daily_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6052 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6053 | IF (l_error) THEN |
|---|
| 6054 | WRITE(numout,*) 'Problem with memory allocation: forcing variables gpp_daily_fm ',kjpindex,nvm,nsfm |
|---|
| 6055 | STOP 'init_forcing' |
|---|
| 6056 | ENDIF |
|---|
| 6057 | ALLOCATE(veget_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6058 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6059 | IF (l_error) THEN |
|---|
| 6060 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_fm ',kjpindex,nvm,nsfm |
|---|
| 6061 | STOP 'init_forcing' |
|---|
| 6062 | ENDIF |
|---|
| 6063 | ALLOCATE(veget_max_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6064 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6065 | IF (l_error) THEN |
|---|
| 6066 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_max_fm ',kjpindex,nvm,nsfm |
|---|
| 6067 | STOP 'init_forcing' |
|---|
| 6068 | ENDIF |
|---|
| 6069 | !!$ ALLOCATE(lai_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6070 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 6071 | !!$ IF (l_error) THEN |
|---|
| 6072 | !!$ WRITE(numout,*) 'Problem with memory allocation: forcing variables lai_fm ',kjpindex,nvm,nsfm |
|---|
| 6073 | !!$ STOP 'init_forcing' |
|---|
| 6074 | !!$ ENDIF |
|---|
| 6075 | ALLOCATE(drainage_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 6076 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6077 | IF (l_error) THEN |
|---|
| 6078 | WRITE(numout,*) 'Problem with memory allocation: forcing variables drainage_fm ',kjpindex,nvm,nsfm |
|---|
| 6079 | STOP 'init_forcing' |
|---|
| 6080 | ENDIF |
|---|
| 6081 | ALLOCATE(isf(nsfm),stat=ier) |
|---|
| 6082 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6083 | IF (l_error) THEN |
|---|
| 6084 | WRITE(numout,*) 'Problem with memory allocation: forcing variables isf ',nsfm |
|---|
| 6085 | STOP 'init_forcing' |
|---|
| 6086 | ENDIF |
|---|
| 6087 | ALLOCATE(nf_written(nsft_loc),stat=ier) |
|---|
| 6088 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6089 | IF (l_error) THEN |
|---|
| 6090 | WRITE(numout,*) 'Problem with memory allocation: forcing variables nf_written ',nsft_loc |
|---|
| 6091 | STOP 'init_forcing' |
|---|
| 6092 | ENDIF |
|---|
| 6093 | ALLOCATE(nf_cumul(nsft_loc),stat=ier) |
|---|
| 6094 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6095 | IF (l_error) THEN |
|---|
| 6096 | WRITE(numout,*) 'Problem with memory allocation: forcing variables nf_cumul ',nsft_loc |
|---|
| 6097 | STOP 'init_forcing' |
|---|
| 6098 | ENDIF |
|---|
| 6099 | |
|---|
| 6100 | !! 2. Allocate memory for the root processor only (parallel computing) |
|---|
| 6101 | |
|---|
| 6102 | ! Where, ::nbp_glo is the number of global continental points |
|---|
| 6103 | IF (is_root_prc) THEN |
|---|
| 6104 | ALLOCATE(clay_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6105 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6106 | IF (l_error) THEN |
|---|
| 6107 | WRITE(numout,*) 'Problem with memory allocation: forcing variables clay_fm_g ',nbp_glo,nsfm |
|---|
| 6108 | STOP 'init_forcing' |
|---|
| 6109 | ENDIF |
|---|
| 6110 | ALLOCATE(silt_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6111 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6112 | IF (l_error) THEN |
|---|
| 6113 | WRITE(numout,*) 'Problem with memory allocation: forcing variables silt_fm_g ',nbp_glo,nsfm |
|---|
| 6114 | STOP 'init_forcing' |
|---|
| 6115 | ENDIF |
|---|
| 6116 | ALLOCATE(bulk_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6117 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6118 | IF (l_error) THEN |
|---|
| 6119 | WRITE(numout,*) 'Problem with memory allocation: forcing variables bulk_fm_g ',nbp_glo,nsfm |
|---|
| 6120 | STOP 'init_forcing' |
|---|
| 6121 | ENDIF |
|---|
| 6122 | ALLOCATE(humrel_daily_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6123 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6124 | IF (l_error) THEN |
|---|
| 6125 | WRITE(numout,*) 'Problem with memory allocation: forcing variables humrel_daily_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6126 | STOP 'init_forcing' |
|---|
| 6127 | ENDIF |
|---|
| 6128 | ALLOCATE(litterhum_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6129 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6130 | IF (l_error) THEN |
|---|
| 6131 | WRITE(numout,*) 'Problem with memory allocation: forcing variables litterhum_daily_fm_g ',nbp_glo,nsfm |
|---|
| 6132 | STOP 'init_forcing' |
|---|
| 6133 | ENDIF |
|---|
| 6134 | ALLOCATE(t2m_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6135 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6136 | IF (l_error) THEN |
|---|
| 6137 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_daily_fm_g ',nbp_glo,nsfm |
|---|
| 6138 | STOP 'init_forcing' |
|---|
| 6139 | ENDIF |
|---|
| 6140 | ALLOCATE(t2m_min_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6141 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6142 | IF (l_error) THEN |
|---|
| 6143 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_min_daily_fm_g ',nbp_glo,nsfm |
|---|
| 6144 | STOP 'init_forcing' |
|---|
| 6145 | ENDIF |
|---|
| 6146 | ALLOCATE(tsurf_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6147 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6148 | IF (l_error) THEN |
|---|
| 6149 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsurf_daily_fm_g ',nbp_glo,nsfm |
|---|
| 6150 | STOP 'init_forcing' |
|---|
| 6151 | ENDIF |
|---|
| 6152 | ALLOCATE(tsoil_daily_fm_g(nbp_glo,nbdl,nsfm),stat=ier) |
|---|
| 6153 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6154 | IF (l_error) THEN |
|---|
| 6155 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsoil_daily_fm_g ',nbp_glo,nbdl,nsfm |
|---|
| 6156 | STOP 'init_forcing' |
|---|
| 6157 | ENDIF |
|---|
| 6158 | ALLOCATE(soilhum_daily_fm_g(nbp_glo,nbdl,nsfm),stat=ier) |
|---|
| 6159 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6160 | IF (l_error) THEN |
|---|
| 6161 | WRITE(numout,*) 'Problem with memory allocation: forcing variables soilhum_daily_fm_g ',nbp_glo,nbdl,nsfm |
|---|
| 6162 | STOP 'init_forcing' |
|---|
| 6163 | ENDIF |
|---|
| 6164 | ALLOCATE(precip_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 6165 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6166 | IF (l_error) THEN |
|---|
| 6167 | WRITE(numout,*) 'Problem with memory allocation: forcing variables precip_fm_g ',nbp_glo,nsfm |
|---|
| 6168 | STOP 'init_forcing' |
|---|
| 6169 | ENDIF |
|---|
| 6170 | ALLOCATE(gpp_daily_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6171 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6172 | IF (l_error) THEN |
|---|
| 6173 | WRITE(numout,*) 'Problem with memory allocation: forcing variables gpp_daily_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6174 | STOP 'init_forcing' |
|---|
| 6175 | ENDIF |
|---|
| 6176 | ALLOCATE(veget_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6177 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6178 | IF (l_error) THEN |
|---|
| 6179 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6180 | STOP 'init_forcing' |
|---|
| 6181 | ENDIF |
|---|
| 6182 | ALLOCATE(veget_max_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6183 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6184 | IF (l_error) THEN |
|---|
| 6185 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_max_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6186 | STOP 'init_forcing' |
|---|
| 6187 | ENDIF |
|---|
| 6188 | !!$ ALLOCATE(lai_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6189 | !!$ l_error = l_error .OR. (ier /= 0) |
|---|
| 6190 | !!$ IF (l_error) THEN |
|---|
| 6191 | !!$ WRITE(numout,*) 'Problem with memory allocation: forcing variables lai_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6192 | !!$ STOP 'init_forcing' |
|---|
| 6193 | !!$ ENDIF |
|---|
| 6194 | ALLOCATE(drainage_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 6195 | l_error = l_error .OR. (ier /= 0) |
|---|
| 6196 | IF (l_error) THEN |
|---|
| 6197 | WRITE(numout,*) 'Problem with memory allocation: forcing variables drainage_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 6198 | STOP 'init_forcing' |
|---|
| 6199 | ENDIF |
|---|
| 6200 | ELSE |
|---|
| 6201 | ! Allocate memory for co-processors |
|---|
| 6202 | ALLOCATE(clay_fm_g(0,nsfm),stat=ier) |
|---|
| 6203 | ALLOCATE(silt_fm_g(0,nsfm),stat=ier) |
|---|
| 6204 | ALLOCATE(bulk_fm_g(0,nsfm),stat=ier) |
|---|
| 6205 | ALLOCATE(humrel_daily_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6206 | ALLOCATE(litterhum_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 6207 | ALLOCATE(t2m_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 6208 | ALLOCATE(t2m_min_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 6209 | ALLOCATE(tsurf_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 6210 | ALLOCATE(tsoil_daily_fm_g(0,nbdl,nsfm),stat=ier) |
|---|
| 6211 | ALLOCATE(soilhum_daily_fm_g(0,nbdl,nsfm),stat=ier) |
|---|
| 6212 | ALLOCATE(precip_fm_g(0,nsfm),stat=ier) |
|---|
| 6213 | ALLOCATE(gpp_daily_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6214 | ALLOCATE(veget_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6215 | ALLOCATE(veget_max_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6216 | !!$ ALLOCATE(lai_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6217 | ALLOCATE(drainage_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 6218 | ENDIF ! is_root_proc |
|---|
| 6219 | |
|---|
| 6220 | IF (l_error) THEN |
|---|
| 6221 | WRITE(numout,*) 'Problem with memory allocation: forcing variables' |
|---|
| 6222 | STOP 'init_forcing' |
|---|
| 6223 | ENDIF |
|---|
| 6224 | |
|---|
| 6225 | !! 3. Initialize variables |
|---|
| 6226 | |
|---|
| 6227 | CALL forcing_zero |
|---|
| 6228 | |
|---|
| 6229 | END SUBROUTINE init_forcing |
|---|
| 6230 | |
|---|
| 6231 | |
|---|
| 6232 | !! ================================================================================================================================ |
|---|
| 6233 | !! SUBROUTINE : forcing_zero |
|---|
| 6234 | !! |
|---|
| 6235 | !>\BRIEF Initialize variables containing the forcing data; variables are |
|---|
| 6236 | !! set to zero. |
|---|
| 6237 | !! |
|---|
| 6238 | !! DESCRIPTION : None |
|---|
| 6239 | !! |
|---|
| 6240 | !! RECENT CHANGE(S) : None |
|---|
| 6241 | !! |
|---|
| 6242 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 6243 | !! |
|---|
| 6244 | !! REFERENCES : None |
|---|
| 6245 | !! |
|---|
| 6246 | !! FLOWCHART : None |
|---|
| 6247 | !! \n |
|---|
| 6248 | !_ ================================================================================================================================ |
|---|
| 6249 | |
|---|
| 6250 | SUBROUTINE forcing_zero |
|---|
| 6251 | |
|---|
| 6252 | clay_fm(:,:) = zero |
|---|
| 6253 | silt_fm(:,:) = zero |
|---|
| 6254 | bulk_fm(:,:) = zero |
|---|
| 6255 | humrel_daily_fm(:,:,:) = zero |
|---|
| 6256 | litterhum_daily_fm(:,:) = zero |
|---|
| 6257 | t2m_daily_fm(:,:) = zero |
|---|
| 6258 | t2m_min_daily_fm(:,:) = zero |
|---|
| 6259 | tsurf_daily_fm(:,:) = zero |
|---|
| 6260 | tsoil_daily_fm(:,:,:) = zero |
|---|
| 6261 | soilhum_daily_fm(:,:,:) = zero |
|---|
| 6262 | precip_fm(:,:) = zero |
|---|
| 6263 | gpp_daily_fm(:,:,:) = zero |
|---|
| 6264 | veget_fm(:,:,:) = zero |
|---|
| 6265 | veget_max_fm(:,:,:) = zero |
|---|
| 6266 | !!$ lai_fm(:,:,:) = zero |
|---|
| 6267 | drainage_fm(:,:,:) = zero |
|---|
| 6268 | END SUBROUTINE forcing_zero |
|---|
| 6269 | |
|---|
| 6270 | |
|---|
| 6271 | !! ================================================================================================================================ |
|---|
| 6272 | !! SUBROUTINE : forcing_write |
|---|
| 6273 | !! |
|---|
| 6274 | !>\BRIEF Appends data values to a netCDF file containing the forcing |
|---|
| 6275 | !! variables of the general processes in stomate. |
|---|
| 6276 | !! |
|---|
| 6277 | !! DESCRIPTION : None |
|---|
| 6278 | !! |
|---|
| 6279 | !! RECENT CHANGE(S) : None |
|---|
| 6280 | !! |
|---|
| 6281 | !! MAIN OUTPUT VARIABLE(S): netCDF file |
|---|
| 6282 | !! |
|---|
| 6283 | !! REFERENCES : None |
|---|
| 6284 | !! |
|---|
| 6285 | !! FLOWCHART : None |
|---|
| 6286 | !! \n |
|---|
| 6287 | !_ ================================================================================================================================ |
|---|
| 6288 | |
|---|
| 6289 | SUBROUTINE forcing_write(forcing_id,ibeg,iend) |
|---|
| 6290 | |
|---|
| 6291 | !! 0. Variable and parameter declaration |
|---|
| 6292 | |
|---|
| 6293 | !! 0.1 Input variables |
|---|
| 6294 | |
|---|
| 6295 | INTEGER(i_std),INTENT(in) :: forcing_id !! File identifer of forcing file, assigned when netcdf is created |
|---|
| 6296 | INTEGER(i_std),INTENT(in) :: ibeg, iend !! First and last time step to be written |
|---|
| 6297 | |
|---|
| 6298 | !! 0.2 Output variables |
|---|
| 6299 | |
|---|
| 6300 | !! 0.3 Modified variables |
|---|
| 6301 | |
|---|
| 6302 | !! 0.4 Local variables |
|---|
| 6303 | |
|---|
| 6304 | INTEGER(i_std) :: ii !! Index of isf where isf is the number of time steps that can be |
|---|
| 6305 | !! stored in memory |
|---|
| 6306 | INTEGER(i_std) :: iblocks !! Index of block that is written |
|---|
| 6307 | INTEGER(i_std) :: nblocks !! Number of blocks that needs to be written |
|---|
| 6308 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 6309 | INTEGER(i_std),DIMENSION(0:2) :: ifirst !! First block in memory - changes with iblocks |
|---|
| 6310 | INTEGER(i_std),DIMENSION(0:2) :: ilast !! Last block in memory - changes with iblocks |
|---|
| 6311 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions |
|---|
| 6312 | INTEGER(i_std),DIMENSION(ndm) :: start !! First block to write |
|---|
| 6313 | INTEGER(i_std) :: ndim !! Dimensions of forcing to be added to the netCDF |
|---|
| 6314 | INTEGER(i_std),DIMENSION(ndm) :: count_force !! Number of elements in each dimension |
|---|
| 6315 | INTEGER(i_std) :: vid !! Variable identifer of netCDF |
|---|
| 6316 | !_ ================================================================================================================================ |
|---|
| 6317 | |
|---|
| 6318 | !! 1. Determine number of blocks of forcing variables that are stored in memory |
|---|
| 6319 | |
|---|
| 6320 | nblocks = 0 |
|---|
| 6321 | ifirst(:) = 1 |
|---|
| 6322 | ilast(:) = 1 |
|---|
| 6323 | DO ii = ibeg, iend |
|---|
| 6324 | IF ( (nblocks /= 0) & |
|---|
| 6325 | & .AND.(isf(ii) == isf(ilast(nblocks))+1)) THEN |
|---|
| 6326 | ! Last block found |
|---|
| 6327 | ilast(nblocks) = ii |
|---|
| 6328 | ELSE |
|---|
| 6329 | ! First block found |
|---|
| 6330 | nblocks = nblocks+1 |
|---|
| 6331 | IF (nblocks > 2) STOP 'Problem in forcing_write' |
|---|
| 6332 | ifirst(nblocks) = ii |
|---|
| 6333 | ilast(nblocks) = ii |
|---|
| 6334 | ENDIF |
|---|
| 6335 | ENDDO |
|---|
| 6336 | |
|---|
| 6337 | !! 2. Gather distributed variables (parallel computing) |
|---|
| 6338 | |
|---|
| 6339 | CALL gather(clay_fm,clay_fm_g) |
|---|
| 6340 | CALL gather(silt_fm,silt_fm_g) |
|---|
| 6341 | CALL gather(bulk_fm,bulk_fm_g) |
|---|
| 6342 | CALL gather(humrel_daily_fm,humrel_daily_fm_g) |
|---|
| 6343 | CALL gather(litterhum_daily_fm,litterhum_daily_fm_g) |
|---|
| 6344 | CALL gather(t2m_daily_fm,t2m_daily_fm_g) |
|---|
| 6345 | CALL gather(t2m_min_daily_fm,t2m_min_daily_fm_g) |
|---|
| 6346 | CALL gather(tsurf_daily_fm,tsurf_daily_fm_g) |
|---|
| 6347 | CALL gather(tsoil_daily_fm,tsoil_daily_fm_g) |
|---|
| 6348 | CALL gather(soilhum_daily_fm,soilhum_daily_fm_g) |
|---|
| 6349 | CALL gather(precip_fm,precip_fm_g) |
|---|
| 6350 | CALL gather(gpp_daily_fm,gpp_daily_fm_g) |
|---|
| 6351 | CALL gather(veget_fm,veget_fm_g) |
|---|
| 6352 | CALL gather(veget_max_fm,veget_max_fm_g) |
|---|
| 6353 | !!$ CALL gather(lai_fm,lai_fm_g) |
|---|
| 6354 | CALL gather(drainage_fm,drainage_fm_g) |
|---|
| 6355 | !! 3. Append data to netCDF file |
|---|
| 6356 | |
|---|
| 6357 | IF (is_root_prc) THEN |
|---|
| 6358 | ! The netCDF file has been created earlier in this module, a file ID is available |
|---|
| 6359 | ! and variables and dimensions have already been defined |
|---|
| 6360 | DO iblocks = 1, nblocks |
|---|
| 6361 | IF (ifirst(iblocks) /= ilast(iblocks)) THEN |
|---|
| 6362 | ndim = 2 |
|---|
| 6363 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6364 | count_force(1:ndim) = SHAPE(clay_fm_g) |
|---|
| 6365 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6366 | ier = NF90_INQ_VARID (forcing_id,'clay',vid) |
|---|
| 6367 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 6368 | & clay_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6369 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6370 | ndim = 2 |
|---|
| 6371 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6372 | count_force(1:ndim) = SHAPE(silt_fm_g) |
|---|
| 6373 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6374 | ier = NF90_INQ_VARID (forcing_id,'silt',vid) |
|---|
| 6375 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 6376 | & silt_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6377 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6378 | ndim = 2 |
|---|
| 6379 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6380 | count_force(1:ndim) = SHAPE(bulk_fm_g) |
|---|
| 6381 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6382 | ier = NF90_INQ_VARID (forcing_id,'bulk',vid) |
|---|
| 6383 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 6384 | & bulk_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6385 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6386 | |
|---|
| 6387 | ndim = 3; |
|---|
| 6388 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6389 | count_force(1:ndim) = SHAPE(humrel_daily_fm_g) |
|---|
| 6390 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6391 | ier = NF90_INQ_VARID (forcing_id,'humrel',vid) |
|---|
| 6392 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6393 | & humrel_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6394 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6395 | ndim = 2; |
|---|
| 6396 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6397 | count_force(1:ndim) = SHAPE(litterhum_daily_fm_g) |
|---|
| 6398 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6399 | ier = NF90_INQ_VARID (forcing_id,'litterhum',vid) |
|---|
| 6400 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6401 | & litterhum_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6402 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6403 | ndim = 2; |
|---|
| 6404 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6405 | count_force(1:ndim) = SHAPE(t2m_daily_fm_g) |
|---|
| 6406 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6407 | ier = NF90_INQ_VARID (forcing_id,'t2m',vid) |
|---|
| 6408 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6409 | & t2m_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6410 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6411 | ndim = 2; |
|---|
| 6412 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6413 | count_force(1:ndim) = SHAPE(t2m_min_daily_fm_g) |
|---|
| 6414 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6415 | ier = NF90_INQ_VARID (forcing_id,'t2m_min',vid) |
|---|
| 6416 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6417 | & t2m_min_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6418 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6419 | ndim = 2; |
|---|
| 6420 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6421 | count_force(1:ndim) = SHAPE(tsurf_daily_fm_g) |
|---|
| 6422 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6423 | ier = NF90_INQ_VARID (forcing_id,'tsurf',vid) |
|---|
| 6424 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6425 | & tsurf_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6426 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6427 | ndim = 3; |
|---|
| 6428 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6429 | count_force(1:ndim) = SHAPE(tsoil_daily_fm_g) |
|---|
| 6430 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6431 | ier = NF90_INQ_VARID (forcing_id,'tsoil',vid) |
|---|
| 6432 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6433 | & tsoil_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6434 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6435 | ndim = 3; |
|---|
| 6436 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6437 | count_force(1:ndim) = SHAPE(soilhum_daily_fm_g) |
|---|
| 6438 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6439 | ier = NF90_INQ_VARID (forcing_id,'soilhum',vid) |
|---|
| 6440 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6441 | & soilhum_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6442 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6443 | ndim = 2; |
|---|
| 6444 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6445 | count_force(1:ndim) = SHAPE(precip_fm_g) |
|---|
| 6446 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6447 | ier = NF90_INQ_VARID (forcing_id,'precip',vid) |
|---|
| 6448 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6449 | & precip_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6450 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6451 | ndim = 3; |
|---|
| 6452 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6453 | count_force(1:ndim) = SHAPE(gpp_daily_fm_g) |
|---|
| 6454 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6455 | ier = NF90_INQ_VARID (forcing_id,'gpp',vid) |
|---|
| 6456 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6457 | & gpp_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6458 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6459 | ndim = 3; |
|---|
| 6460 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6461 | count_force(1:ndim) = SHAPE(veget_fm_g) |
|---|
| 6462 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6463 | ier = NF90_INQ_VARID (forcing_id,'veget',vid) |
|---|
| 6464 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6465 | & veget_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6466 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6467 | ndim = 3; |
|---|
| 6468 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6469 | count_force(1:ndim) = SHAPE(veget_max_fm_g) |
|---|
| 6470 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6471 | ier = NF90_INQ_VARID (forcing_id,'veget_max',vid) |
|---|
| 6472 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6473 | & veget_max_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6474 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6475 | !!$ ndim = 3; |
|---|
| 6476 | !!$ start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6477 | !!$ count_force(1:ndim) = SHAPE(lai_fm_g) |
|---|
| 6478 | !!$ count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6479 | !!$ ier = NF90_INQ_VARID (forcing_id,'lai',vid) |
|---|
| 6480 | !!$ ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6481 | !!$ & lai_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6482 | !!$ & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6483 | ndim = 2; |
|---|
| 6484 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6485 | count_force(1:ndim) = SHAPE(drainage_fm_g) |
|---|
| 6486 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6487 | ier = NF90_INQ_VARID (forcing_id,'drainage',vid) |
|---|
| 6488 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 6489 | & drainage_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6490 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6491 | ENDIF |
|---|
| 6492 | ENDDO |
|---|
| 6493 | ENDIF |
|---|
| 6494 | |
|---|
| 6495 | !! 4. Adjust flag of forcing file |
|---|
| 6496 | nf_written(isf(:)) = .TRUE. |
|---|
| 6497 | |
|---|
| 6498 | END SUBROUTINE forcing_write |
|---|
| 6499 | |
|---|
| 6500 | |
|---|
| 6501 | !! ================================================================================================================================ |
|---|
| 6502 | !! SUBROUTINE : stomate_forcing_read |
|---|
| 6503 | !! |
|---|
| 6504 | !>\BRIEF Read forcing file. |
|---|
| 6505 | !! |
|---|
| 6506 | !! DESCRIPTION : None |
|---|
| 6507 | !! |
|---|
| 6508 | !! RECENT CHANGE(S) : None |
|---|
| 6509 | !! |
|---|
| 6510 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 6511 | !! |
|---|
| 6512 | !! REFERENCES : None |
|---|
| 6513 | !! |
|---|
| 6514 | !! FLOWCHART : None |
|---|
| 6515 | !! \n |
|---|
| 6516 | !_ ================================================================================================================================ |
|---|
| 6517 | |
|---|
| 6518 | SUBROUTINE stomate_forcing_read(forcing_id,nsfm) |
|---|
| 6519 | |
|---|
| 6520 | !! 0. Variable and parameter declaration |
|---|
| 6521 | |
|---|
| 6522 | !! 0.1 Input variables |
|---|
| 6523 | |
|---|
| 6524 | INTEGER(i_std),INTENT(in) :: forcing_id !! File identifer of forcing file, assigned when netcdf is created |
|---|
| 6525 | INTEGER(i_std),INTENT(in) :: nsfm !! Number of time steps stored in memory |
|---|
| 6526 | |
|---|
| 6527 | !! 0.2 Output variables |
|---|
| 6528 | |
|---|
| 6529 | !! 0.3 Modified variables |
|---|
| 6530 | |
|---|
| 6531 | !! 0.4 Local variables |
|---|
| 6532 | |
|---|
| 6533 | INTEGER(i_std) :: ii !! Index of isf where isf is the number of time steps that can be stored in |
|---|
| 6534 | !! memory |
|---|
| 6535 | INTEGER(i_std) :: iblocks !! Index of block that is written |
|---|
| 6536 | INTEGER(i_std) :: nblocks !! Number of blocks that needs to be written |
|---|
| 6537 | INTEGER(i_std) :: ier !! Check error of netcdf call |
|---|
| 6538 | INTEGER(i_std),DIMENSION(0:2) :: ifirst !! First block in memory - changes with iblocks |
|---|
| 6539 | INTEGER(i_std),DIMENSION(0:2) :: ilast !! Last block in memory - changes with iblocks |
|---|
| 6540 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions |
|---|
| 6541 | INTEGER(i_std),DIMENSION(ndm) :: start !! First block to write |
|---|
| 6542 | INTEGER(i_std) :: ndim !! Dimensions of forcing to be added to the netCDF |
|---|
| 6543 | INTEGER(i_std),DIMENSION(ndm) :: count_force !! Number of elements in each dimension |
|---|
| 6544 | INTEGER(i_std) :: vid !! Variable identifer of netCDF |
|---|
| 6545 | LOGICAL, PARAMETER :: check=.FALSE. !! Flag for debugging |
|---|
| 6546 | LOGICAL :: a_er=.FALSE. !! Error catching from netcdf file |
|---|
| 6547 | !_ ================================================================================================================================ |
|---|
| 6548 | |
|---|
| 6549 | IF (check) WRITE(numout,*) "stomate_forcing_read " |
|---|
| 6550 | |
|---|
| 6551 | !! 1. Set to zero if the corresponding forcing state |
|---|
| 6552 | |
|---|
| 6553 | ! has not yet been written into the file |
|---|
| 6554 | DO ii = 1, nsfm |
|---|
| 6555 | IF (.NOT.nf_written(isf(ii))) THEN |
|---|
| 6556 | clay_fm(:,ii) = zero |
|---|
| 6557 | silt_fm(:,iisf) = zero |
|---|
| 6558 | bulk_fm(:,iisf) = zero |
|---|
| 6559 | humrel_daily_fm(:,:,ii) = zero |
|---|
| 6560 | litterhum_daily_fm(:,ii) = zero |
|---|
| 6561 | t2m_daily_fm(:,ii) = zero |
|---|
| 6562 | t2m_min_daily_fm(:,ii) = zero |
|---|
| 6563 | tsurf_daily_fm(:,ii) = zero |
|---|
| 6564 | tsoil_daily_fm(:,:,ii) = zero |
|---|
| 6565 | soilhum_daily_fm(:,:,ii) = zero |
|---|
| 6566 | precip_fm(:,ii) = zero |
|---|
| 6567 | gpp_daily_fm(:,:,ii) = zero |
|---|
| 6568 | veget_fm(:,:,ii) = zero |
|---|
| 6569 | veget_max_fm(:,:,ii) = zero |
|---|
| 6570 | !!$ lai_fm(:,:,ii) = zero |
|---|
| 6571 | drainage_fm(:,:,iisf) = zero |
|---|
| 6572 | ENDIF |
|---|
| 6573 | ENDDO |
|---|
| 6574 | |
|---|
| 6575 | !! 2. determine blocks of forcing states that are contiguous in memory |
|---|
| 6576 | |
|---|
| 6577 | nblocks = 0 |
|---|
| 6578 | ifirst(:) = 1 |
|---|
| 6579 | ilast(:) = 1 |
|---|
| 6580 | |
|---|
| 6581 | DO ii = 1, nsfm |
|---|
| 6582 | IF (nf_written(isf(ii))) THEN |
|---|
| 6583 | IF ( (nblocks /= 0) & |
|---|
| 6584 | & .AND.(isf(ii) == isf(ilast(nblocks))+1)) THEN |
|---|
| 6585 | |
|---|
| 6586 | ! element is contiguous with last element found |
|---|
| 6587 | ilast(nblocks) = ii |
|---|
| 6588 | ELSE |
|---|
| 6589 | |
|---|
| 6590 | ! found first element of new block |
|---|
| 6591 | nblocks = nblocks+1 |
|---|
| 6592 | IF (nblocks > 2) STOP 'Problem in stomate_forcing_read' |
|---|
| 6593 | |
|---|
| 6594 | ifirst(nblocks) = ii |
|---|
| 6595 | ilast(nblocks) = ii |
|---|
| 6596 | ENDIF |
|---|
| 6597 | ENDIF |
|---|
| 6598 | ENDDO |
|---|
| 6599 | IF (check) WRITE(numout,*) "stomate_forcing_read nblocks, ifirst, ilast",nblocks, ifirst, ilast |
|---|
| 6600 | |
|---|
| 6601 | !! 3. Read variable values |
|---|
| 6602 | |
|---|
| 6603 | IF (is_root_prc) THEN |
|---|
| 6604 | DO iblocks = 1, nblocks |
|---|
| 6605 | IF (check) WRITE(numout,*) "stomate_forcing_read iblocks, ifirst(iblocks), ilast(iblocks)",iblocks, & |
|---|
| 6606 | ifirst(iblocks), ilast(iblocks) |
|---|
| 6607 | IF (ifirst(iblocks) /= ilast(iblocks)) THEN |
|---|
| 6608 | a_er=.FALSE. |
|---|
| 6609 | ndim = 2; |
|---|
| 6610 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6611 | count_force(1:ndim) = SHAPE(clay_fm_g) |
|---|
| 6612 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6613 | ier = NF90_INQ_VARID (forcing_id,'clay',vid) |
|---|
| 6614 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6615 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6616 | & clay_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6617 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6618 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6619 | |
|---|
| 6620 | |
|---|
| 6621 | ndim = 2; |
|---|
| 6622 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6623 | count_force(1:ndim) = SHAPE(silt_fm_g) |
|---|
| 6624 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6625 | ier = NF90_INQ_VARID (forcing_id,'silt',vid) |
|---|
| 6626 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6627 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6628 | & silt_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6629 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6630 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6631 | |
|---|
| 6632 | ndim = 2; |
|---|
| 6633 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6634 | count_force(1:ndim) = SHAPE(bulk_fm_g) |
|---|
| 6635 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6636 | ier = NF90_INQ_VARID (forcing_id,'bulk',vid) |
|---|
| 6637 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6638 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6639 | & bulk_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6640 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6641 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6642 | |
|---|
| 6643 | ndim = 3; |
|---|
| 6644 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6645 | count_force(1:ndim) = SHAPE(humrel_daily_fm_g) |
|---|
| 6646 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6647 | ier = NF90_INQ_VARID (forcing_id,'humrel',vid) |
|---|
| 6648 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6649 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6650 | & humrel_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6651 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6652 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6653 | |
|---|
| 6654 | ndim = 2; |
|---|
| 6655 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6656 | count_force(1:ndim) = SHAPE(litterhum_daily_fm_g) |
|---|
| 6657 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6658 | ier = NF90_INQ_VARID (forcing_id,'litterhum',vid) |
|---|
| 6659 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6660 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6661 | & litterhum_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6662 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6663 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6664 | |
|---|
| 6665 | ndim = 2; |
|---|
| 6666 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6667 | count_force(1:ndim) = SHAPE(t2m_daily_fm_g) |
|---|
| 6668 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6669 | ier = NF90_INQ_VARID (forcing_id,'t2m',vid) |
|---|
| 6670 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6671 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6672 | & t2m_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6673 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6674 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6675 | |
|---|
| 6676 | ndim = 2; |
|---|
| 6677 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6678 | count_force(1:ndim) = SHAPE(t2m_min_daily_fm_g) |
|---|
| 6679 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6680 | ier = NF90_INQ_VARID (forcing_id,'t2m_min',vid) |
|---|
| 6681 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6682 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6683 | & t2m_min_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6684 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6685 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6686 | |
|---|
| 6687 | ndim = 2; |
|---|
| 6688 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6689 | count_force(1:ndim) = SHAPE(tsurf_daily_fm_g) |
|---|
| 6690 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6691 | ier = NF90_INQ_VARID (forcing_id,'tsurf',vid) |
|---|
| 6692 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6693 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6694 | & tsurf_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6695 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6696 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6697 | |
|---|
| 6698 | ndim = 3; |
|---|
| 6699 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6700 | count_force(1:ndim) = SHAPE(tsoil_daily_fm_g) |
|---|
| 6701 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6702 | ier = NF90_INQ_VARID (forcing_id,'tsoil',vid) |
|---|
| 6703 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6704 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6705 | & tsoil_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6706 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6707 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6708 | |
|---|
| 6709 | ndim = 3; |
|---|
| 6710 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6711 | count_force(1:ndim) = SHAPE(soilhum_daily_fm_g) |
|---|
| 6712 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6713 | ier = NF90_INQ_VARID (forcing_id,'soilhum',vid) |
|---|
| 6714 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6715 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6716 | & soilhum_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6717 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6718 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6719 | |
|---|
| 6720 | ndim = 2; |
|---|
| 6721 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6722 | count_force(1:ndim) = SHAPE(precip_fm_g) |
|---|
| 6723 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6724 | ier = NF90_INQ_VARID (forcing_id,'precip',vid) |
|---|
| 6725 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6726 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6727 | & precip_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6728 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6729 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6730 | |
|---|
| 6731 | ndim = 3; |
|---|
| 6732 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6733 | count_force(1:ndim) = SHAPE(gpp_daily_fm_g) |
|---|
| 6734 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6735 | ier = NF90_INQ_VARID (forcing_id,'gpp',vid) |
|---|
| 6736 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6737 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6738 | & gpp_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6739 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6740 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6741 | |
|---|
| 6742 | ndim = 3; |
|---|
| 6743 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6744 | count_force(1:ndim) = SHAPE(veget_fm_g) |
|---|
| 6745 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6746 | ier = NF90_INQ_VARID (forcing_id,'veget',vid) |
|---|
| 6747 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6748 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6749 | & veget_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6750 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6751 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6752 | |
|---|
| 6753 | ndim = 3; |
|---|
| 6754 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6755 | count_force(1:ndim) = SHAPE(veget_max_fm_g) |
|---|
| 6756 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6757 | ier = NF90_INQ_VARID (forcing_id,'veget_max',vid) |
|---|
| 6758 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6759 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6760 | & veget_max_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6761 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6762 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6763 | |
|---|
| 6764 | !!$ ndim = 3; |
|---|
| 6765 | !!$ start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6766 | !!$ count_force(1:ndim) = SHAPE(lai_fm_g) |
|---|
| 6767 | !!$ count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6768 | !!$ ier = NF90_INQ_VARID (forcing_id,'lai',vid) |
|---|
| 6769 | !!$ a_er = a_er.OR.(ier /= 0) |
|---|
| 6770 | !!$ ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6771 | !!$ & lai_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6772 | !!$ & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6773 | !!$ a_er = a_er.OR.(ier /= 0) |
|---|
| 6774 | |
|---|
| 6775 | ndim = 2; |
|---|
| 6776 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 6777 | count_force(1:ndim) = SHAPE(drainage_fm_g) |
|---|
| 6778 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 6779 | ier = NF90_INQ_VARID (forcing_id,'drainage',vid) |
|---|
| 6780 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6781 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 6782 | & drainage_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 6783 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 6784 | a_er = a_er.OR.(ier /= 0) |
|---|
| 6785 | IF (a_er) THEN |
|---|
| 6786 | CALL ipslerr_p (3,'stomate_forcing_read', & |
|---|
| 6787 | & 'PROBLEM when read forcing file', & |
|---|
| 6788 | & '','') |
|---|
| 6789 | ENDIF |
|---|
| 6790 | |
|---|
| 6791 | ENDIF ! (ifirst(iblocks) /= ilast(iblocks)) |
|---|
| 6792 | ENDDO ! iblocks |
|---|
| 6793 | ENDIF ! is_root_prc |
|---|
| 6794 | |
|---|
| 6795 | !! 4. Distribute the variable over several processors |
|---|
| 6796 | |
|---|
| 6797 | CALL scatter(clay_fm_g,clay_fm) |
|---|
| 6798 | CALL scatter(silt_fm_g,silt_fm) |
|---|
| 6799 | CALL scatter(bulk_fm_g,bulk_fm) |
|---|
| 6800 | CALL scatter(humrel_daily_fm_g,humrel_daily_fm) |
|---|
| 6801 | CALL scatter(litterhum_daily_fm_g,litterhum_daily_fm) |
|---|
| 6802 | CALL scatter(t2m_daily_fm_g,t2m_daily_fm) |
|---|
| 6803 | CALL scatter(t2m_min_daily_fm_g,t2m_min_daily_fm) |
|---|
| 6804 | CALL scatter(tsurf_daily_fm_g,tsurf_daily_fm) |
|---|
| 6805 | CALL scatter(tsoil_daily_fm_g,tsoil_daily_fm) |
|---|
| 6806 | CALL scatter(soilhum_daily_fm_g,soilhum_daily_fm) |
|---|
| 6807 | CALL scatter(precip_fm_g,precip_fm) |
|---|
| 6808 | CALL scatter(gpp_daily_fm_g,gpp_daily_fm) |
|---|
| 6809 | CALL scatter(veget_fm_g,veget_fm) |
|---|
| 6810 | CALL scatter(veget_max_fm_g,veget_max_fm) |
|---|
| 6811 | !!$ CALL scatter(lai_fm_g,lai_fm) |
|---|
| 6812 | CALL scatter(drainage_fm_g,drainage_fm) |
|---|
| 6813 | END SUBROUTINE stomate_forcing_read |
|---|
| 6814 | |
|---|
| 6815 | |
|---|
| 6816 | !! ================================================================================================================================ |
|---|
| 6817 | !! SUBROUTINE : setlai |
|---|
| 6818 | !! |
|---|
| 6819 | !>\BRIEF Routine to force the lai in STOMATE. The code in this routine |
|---|
| 6820 | !! simply CALCULATES lai and is therefore not functional. The routine should be |
|---|
| 6821 | !! rewritten if one wants to force lai. Forcing lai with the new allocation is |
|---|
| 6822 | !! not straightforward and would quickly (after 5 years ?) result in serious |
|---|
| 6823 | !! inconsistencies |
|---|
| 6824 | !! |
|---|
| 6825 | !! DESCRIPTION : None |
|---|
| 6826 | !! |
|---|
| 6827 | !! RECENT CHANGE(S) : None |
|---|
| 6828 | !! |
|---|
| 6829 | !! MAIN OUTPUT VARIABLE(S): ::lai |
|---|
| 6830 | !! |
|---|
| 6831 | !! REFERENCE(S) : None |
|---|
| 6832 | !! |
|---|
| 6833 | !! FLOWCHART : None |
|---|
| 6834 | !! \n |
|---|
| 6835 | !_ ================================================================================================================================ |
|---|
| 6836 | |
|---|
| 6837 | !!$ SUBROUTINE setlai(kjpindex,lai, circ_class_biomass, circ_class_n) |
|---|
| 6838 | !!$ |
|---|
| 6839 | !!$ !! 0 Variable and parameter declaration |
|---|
| 6840 | !!$ |
|---|
| 6841 | !!$ !! 0.1 Input variables |
|---|
| 6842 | !!$ |
|---|
| 6843 | !!$ INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - number of pixels (unitless) |
|---|
| 6844 | !!$ REAL(r_std), DIMENSION(:,:,:,:,:), INTENT(in) :: circ_class_biomass !! Biomass per PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 6845 | !!$ REAL(r_std), DIMENSION(:,:,:), INTENT(in) :: circ_class_n !! Biomass per PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 6846 | !!$ !! 0.2 Output variables |
|---|
| 6847 | !!$ |
|---|
| 6848 | !!$ REAL(r_std),DIMENSION(kjpindex,nvm), INTENT(out) :: lai !! PFT leaf area index @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 6849 | !!$ |
|---|
| 6850 | !!$ !! 0.3 Modified variables |
|---|
| 6851 | !!$ |
|---|
| 6852 | !!$ !! 0.4 Local variables |
|---|
| 6853 | !!$ |
|---|
| 6854 | !!$ INTEGER(i_std) :: j,i !! index (unitless) |
|---|
| 6855 | !!$!_ ================================================================================================================================ |
|---|
| 6856 | !!$ |
|---|
| 6857 | !!$ !! 1. Set lai for bare soil to zero |
|---|
| 6858 | !!$ |
|---|
| 6859 | !!$ lai(:,ibare_sechiba) = zero |
|---|
| 6860 | !!$ |
|---|
| 6861 | !!$ !! 2. Multiply foliage biomass by sla to calculate lai for all PFTs and pixels |
|---|
| 6862 | !!$ DO i=1, kjpindex |
|---|
| 6863 | !!$ DO j=2,nvm |
|---|
| 6864 | !!$ lai(i,j) = cc_to_lai(circ_class_biomass(i,j,:,ileaf,icarbon),circ_class_n(i,j,:),j) |
|---|
| 6865 | !!$ ENDDO |
|---|
| 6866 | !!$ ENDDO |
|---|
| 6867 | !!$ END SUBROUTINE setlai |
|---|
| 6868 | |
|---|
| 6869 | |
|---|
| 6870 | END MODULE stomate |
|---|
