[7541] | 1 | ! ================================================================================================================================ |
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| 2 | ! MODULE : chemistry |
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| 3 | ! |
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| 4 | ! CONTACT : orchidee-help _at_ listes.ipsl.fr |
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| 5 | ! |
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| 6 | ! LICENCE : IPSL (2006) |
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| 7 | ! This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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| 8 | ! |
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| 9 | !>\BRIEF |
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| 10 | !! |
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| 11 | !!\n DESCRIPTION: |
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| 12 | !! |
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| 13 | !! RECENT CHANGE(S): The content of this module were previously part of the diffuco module. |
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| 14 | !! ok_inca changed name into ok_bvoc and DIFFUCO_OK_INCA changed into CHEMISTRY_BVOC |
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| 15 | !! LEAFAGE_OK_INCA changed name into CHEMISTRY_LEAFAGE |
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| 16 | !! |
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| 17 | !! $HeadURL: svn://forge.ipsl.jussieu.fr/orchidee/branches/ORCHIDEE_2_2/ORCHIDEE/src_sechiba/chemistry.f90 $ |
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| 18 | !! $Date: 2018-08-02 09:06:40 +0200 (Thu, 02 Aug 2018) $ |
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| 19 | !! $Revision: 5364 $ |
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| 20 | !! \n |
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| 21 | !_ ================================================================================================================================ |
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| 22 | |
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| 23 | MODULE chemistry |
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| 24 | |
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| 25 | USE ioipsl |
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| 26 | USE constantes |
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| 27 | USE qsat_moisture |
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| 28 | USE sechiba_io_p |
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| 29 | USE ioipsl |
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| 30 | USE pft_parameters |
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| 31 | USE grid |
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| 32 | USE time, ONLY : one_day, dt_sechiba, julian_diff, one_hour, one_year |
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| 33 | USE ioipsl_para |
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| 34 | USE xios_orchidee |
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| 35 | |
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| 36 | IMPLICIT NONE |
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| 37 | |
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| 38 | PRIVATE |
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| 39 | PUBLIC :: chemistry_xios_initialize, chemistry_initialize, chemistry_bvoc, chemistry_flux_interface, chemistry_clear |
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| 40 | |
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| 41 | |
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| 42 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_iso !! Isoprene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 43 | !$OMP THREADPRIVATE(flx_iso) |
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| 44 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_mono !! Monoterpene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 45 | !$OMP THREADPRIVATE(flx_mono) |
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| 46 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_ORVOC !! Other Volatile Organic Compound emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 47 | !$OMP THREADPRIVATE(flx_ORVOC) |
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| 48 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_MBO !! 2-methyl-3-buten-2-ol emissions from vegetation (mainly pines in America) (kgC.m^{-2}.s^{-1}) |
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| 49 | !$OMP THREADPRIVATE(flx_MBO) |
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| 50 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_methanol !! Methanol emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 51 | !$OMP THREADPRIVATE(flx_methanol) |
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| 52 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_acetone !! Acetone emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 53 | !$OMP THREADPRIVATE(flx_acetone) |
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| 54 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_acetal !! Acetaldehyde emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 55 | !$OMP THREADPRIVATE(flx_acetal) |
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| 56 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_formal !! Formaldehyde emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 57 | !$OMP THREADPRIVATE(flx_formal) |
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| 58 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_acetic !! Acetic acid emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 59 | !$OMP THREADPRIVATE(flx_acetic) |
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| 60 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_formic !! Formic acid emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 61 | !$OMP THREADPRIVATE(flx_formic) |
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| 62 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_apinen !! Alpha pinene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 63 | !$OMP THREADPRIVATE(flx_apinen) |
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| 64 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_bpinen !! Beta pinene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 65 | !$OMP THREADPRIVATE(flx_bpinen) |
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| 66 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_limonen !! Limonene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 67 | !$OMP THREADPRIVATE(flx_limonen) |
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| 68 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_myrcen !! Myrcene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 69 | !$OMP THREADPRIVATE(flx_myrcen) |
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| 70 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_sabinen !! Sabinene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 71 | !$OMP THREADPRIVATE(flx_sabinen) |
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| 72 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_camphen !! Camphene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 73 | !$OMP THREADPRIVATE(flx_camphen) |
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| 74 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_3caren !! 3-Carene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 75 | !$OMP THREADPRIVATE(flx_3caren) |
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| 76 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_tbocimen !! T-beta Ocimene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 77 | !$OMP THREADPRIVATE(flx_tbocimen) |
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| 78 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_othermono !! Emissions of other monoterpenes from vegetation (kgC.m^{-2}.s^{-1}) |
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| 79 | !$OMP THREADPRIVATE(flx_othermono) |
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| 80 | REAL(r_std),ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_sesquiter !! Sesquiterpene emissions from vegetation (kgC.m^{-2}.s^{-1}) |
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| 81 | !$OMP THREADPRIVATE(flx_sesquiter) |
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| 82 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_fertil_no !! Biogenic nitrogen oxide soil emission due to N-fertilisation (ngN.m^{-2}.s^{-1}) |
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| 83 | !$OMP THREADPRIVATE(flx_fertil_no) |
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| 84 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_no_soil !! Nitrogen Oxide emissions from soil, before deposition on canopy |
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| 85 | !! (ngN.m^{-2}.s^{-1}) |
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| 86 | !$OMP THREADPRIVATE(flx_no_soil) |
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| 87 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: flx_no !! Net nitrogen Oxide emissions from soil, after deposition on canopy |
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| 88 | !$OMP THREADPRIVATE(flx_no) |
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| 89 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:) :: CRF !! Canopy reduction factor for net NO flux calculation (kjpindex,nvm) |
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| 90 | !$OMP THREADPRIVATE(CRF) |
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| 91 | |
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| 92 | ! variables used inside diffuco_inca module |
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| 93 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: ok_siesta !! Flag for controlling post-pulse period (true/false) |
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| 94 | !$OMP THREADPRIVATE(ok_siesta) |
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| 95 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: allow_pulse !! Flag for controlling pulse period (true/false) |
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| 96 | !$OMP THREADPRIVATE(allow_pulse) |
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| 97 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: pulse !! Pulse fonction |
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| 98 | !$OMP THREADPRIVATE(pulse) |
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| 99 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: pulseday !! Counter for pulse period |
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| 100 | !$OMP THREADPRIVATE(pulseday) |
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| 101 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: siestaday !! Counter for post-pulse period |
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| 102 | !$OMP THREADPRIVATE(siestaday) |
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| 103 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: pulselim !! Pulse period length |
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| 104 | !$OMP THREADPRIVATE(pulselim) |
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| 105 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: siestalim !! Post-pulse period length |
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| 106 | !$OMP THREADPRIVATE(siestalim) |
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| 107 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: area2 !! Grid cell area (m^2) |
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| 108 | !$OMP THREADPRIVATE(area2) |
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| 109 | REAL(r_std), SAVE :: nbre_precip |
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| 110 | !$OMP THREADPRIVATE(nbre_precip) |
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| 111 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: flx_co2_bbg_year !! CO2 emissions from biomass burning |
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| 112 | !! Read in an input file (kgC.m^{-2}.year^{-1}) |
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| 113 | !$OMP THREADPRIVATE(flx_co2_bbg_year) |
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| 114 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: N_qt_WRICE_year !! N fertilizers applied on wetland rice |
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| 115 | !! Read in an input file (kgN.yr^{-1}) |
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| 116 | !$OMP THREADPRIVATE(N_qt_WRICE_year) |
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| 117 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: N_qt_OTHER_year !! N fertilizers applied on other crops and grasses |
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| 118 | !! Read in an input file (kgN.yr^{-1}) |
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| 119 | !$OMP THREADPRIVATE(N_qt_OTHER_year) |
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| 120 | LOGICAL, SAVE :: l_first_chemistry_inca=.TRUE. !! Initialisation for chemistry_flux_interface |
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| 121 | !$OMP THREADPRIVATE(l_first_chemistry_inca) |
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| 122 | |
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| 123 | |
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| 124 | |
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| 125 | CONTAINS |
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| 126 | |
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| 127 | |
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| 128 | !! ============================================================================================================================= |
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| 129 | !! SUBROUTINE: chemistry_xios_initialize |
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| 130 | !! |
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| 131 | !>\BRIEF Initialize xios dependant defintion before closing context defintion |
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| 132 | !! |
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| 133 | !! DESCRIPTION: Initialize xios dependant defintion before closing context defintion |
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| 134 | !! |
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| 135 | !! \n |
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| 136 | !_ ============================================================================================================================== |
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| 137 | |
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| 138 | SUBROUTINE chemistry_xios_initialize |
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| 139 | |
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| 140 | CHARACTER(LEN=255) :: filename, name |
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| 141 | |
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| 142 | |
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| 143 | !! 1. Treat the file for fertilzation needed for option ok_cropsfertil_Nox |
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| 144 | |
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| 145 | ! Read the input file name from run.def |
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| 146 | filename = 'orchidee_fertilizer_1995.nc' |
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| 147 | CALL getin_p('N_FERTIL_FILE',filename) |
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| 148 | |
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| 149 | ! Remove suffix .nc from filename |
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| 150 | name = filename(1:LEN_TRIM(FILENAME)-3) |
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| 151 | CALL xios_orchidee_set_file_attr("fertilizer_file",name=name) |
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| 152 | |
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| 153 | ! Check if the file will be read by XIOS, by IOIPSL or not at all |
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| 154 | IF (xios_interpolation .AND. ok_cropsfertil_Nox) THEN |
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| 155 | IF (printlev>=2) WRITE (numout,*) 'The fertilizer file will be read later by XIOS' |
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| 156 | ELSE |
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| 157 | IF (ok_cropsfertil_Nox) THEN |
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| 158 | IF (printlev>=2) WRITE (numout,*) 'The fertilizer file will be read later by IOIPSL' |
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| 159 | ELSE |
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| 160 | IF (printlev>=2) WRITE (numout,*) 'The fertilizer file will not be read' |
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| 161 | END IF |
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| 162 | |
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| 163 | ! The fertilizer file will not be read by XIOS. Now deactivate it for XIOS. |
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| 164 | CALL xios_orchidee_set_file_attr("fertilizer_file",enabled=.FALSE.) |
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| 165 | CALL xios_orchidee_set_field_attr("N_qt_WRICE_year_interp",enabled=.FALSE.) |
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| 166 | CALL xios_orchidee_set_field_attr("N_qt_OTHER_year_interp",enabled=.FALSE.) |
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| 167 | END IF |
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| 168 | |
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| 169 | |
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| 170 | !! 2. Treat the file for bbg fertil needed for option ok_bbgfertil_Nox |
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| 171 | |
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| 172 | ! Read the input file name from run.def |
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| 173 | filename = 'orchidee_bbg_clim.nc' |
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| 174 | CALL getin_p('CO2_BBG_FILE',filename) |
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| 175 | |
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| 176 | ! Remove suffix .nc from filename |
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| 177 | name = filename(1:LEN_TRIM(FILENAME)-3) |
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| 178 | CALL xios_orchidee_set_file_attr("bbg_clim_file",name=name) |
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| 179 | |
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| 180 | ! Check if the file will be read by XIOS, by IOIPSL or not at all |
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| 181 | IF (xios_interpolation .AND. ok_bbgfertil_Nox) THEN |
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| 182 | IF (printlev>=2) WRITE (numout,*) 'The bbgfertil file will be read later by XIOS' |
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| 183 | ELSE |
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| 184 | IF (ok_bbgfertil_Nox) THEN |
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| 185 | IF (printlev>=2) WRITE (numout,*) 'The bbgfertil file will be read later by IOIPSL' |
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| 186 | ELSE |
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| 187 | IF (printlev>=2) WRITE (numout,*) 'The bbgfertil file will not be read' |
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| 188 | END IF |
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| 189 | |
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| 190 | ! This file will not be read by XIOS. Now deactivate it for XIOS. |
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| 191 | CALL xios_orchidee_set_file_attr("bbg_clim_file",enabled=.FALSE.) |
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| 192 | CALL xios_orchidee_set_field_attr("flx_co2_bbg_year_interp",enabled=.FALSE.) |
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| 193 | END IF |
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| 194 | |
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| 195 | |
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| 196 | END SUBROUTINE chemistry_xios_initialize |
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| 197 | |
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| 198 | !! ================================================================================================================================ |
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| 199 | !! SUBROUTINE : chemistry_initialize |
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| 200 | !! |
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| 201 | !>\BRIEF This subroutine initializes the chemistry module |
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| 202 | !! |
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| 203 | !! DESCRIPTION : Some of the variables and flags used chemistry_bvoc are allocated and initialised here. |
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| 204 | !! |
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| 205 | !! RECENT CHANGE(S): Changed name from diffuco_inca_init to chemistry_initialize |
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| 206 | !! |
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| 207 | !! MAIN OUTPUT VARIABLE(S): None |
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| 208 | !! |
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| 209 | !! REFERENCE(S) : None |
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| 210 | !! |
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| 211 | !! FLOWCHART : None |
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| 212 | !_ ================================================================================================================================ |
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| 213 | SUBROUTINE chemistry_initialize(kjpindex, lalo, neighbours, resolution) |
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| 214 | |
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| 215 | USE interpweight |
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| 216 | |
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| 217 | IMPLICIT NONE |
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| 218 | |
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| 219 | !! 0. Variables and parameter declaration |
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| 220 | |
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| 221 | !! 0.1 Input variables |
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| 222 | |
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| 223 | INTEGER(i_std), INTENT(in) :: kjpindex !! Domain size (unitless) |
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| 224 | REAL(r_std), DIMENSION(kjpindex,2), INTENT (in) :: lalo !! Geographical coordinates |
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| 225 | INTEGER(i_std), DIMENSION(kjpindex,8), INTENT (in) :: neighbours !! Vector of neighbours for each |
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| 226 | !! grid point (1=N, 2=E, 3=S, 4=W) |
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| 227 | REAL(r_std),DIMENSION (kjpindex,2), INTENT(in) :: resolution !! The size in km of each grid-box in X and Y |
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| 228 | |
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| 229 | !! 0.2 Output variables |
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| 230 | REAL(r_std), DIMENSION(kjpindex) :: achem_wrice !! Availability of data for the interpolation |
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| 231 | REAL(r_std), DIMENSION(kjpindex) :: achem_other !! Availability of data for the interpolation |
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| 232 | REAL(r_std), DIMENSION(kjpindex) :: achem_co2 !! Availability of data for the interpolation |
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| 233 | |
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| 234 | !! 0.3 Modified variables |
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| 235 | |
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| 236 | !! 0.4 Local variables |
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| 237 | LOGICAL :: allow_weathergen |
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| 238 | CHARACTER(LEN=80) :: filename, fieldname |
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| 239 | INTEGER(i_std) :: iml, jml, lml, tml, force_id |
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| 240 | INTEGER(i_std) :: ier |
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| 241 | REAL(r_std) :: vmin, vmax !! min/max values to use for the |
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| 242 | !! renormalization |
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| 243 | CHARACTER(LEN=250) :: maskvname !! Variable to read the mask from |
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| 244 | !! the file |
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| 245 | CHARACTER(LEN=80) :: lonname, latname !! lon, lat names in input file |
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| 246 | REAL(r_std), DIMENSION(:), ALLOCATABLE :: variabletypevals !! Values for all the types of the variable |
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| 247 | !! (variabletypevals(1) = -un, not used) |
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| 248 | CHARACTER(LEN=50) :: fractype !! method of calculation of fraction |
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| 249 | !! 'XYKindTime': Input values are kinds |
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| 250 | !! of something with a temporal |
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| 251 | !! evolution on the dx*dy matrix' |
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| 252 | LOGICAL :: nonegative !! whether negative values should be removed |
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| 253 | CHARACTER(LEN=50) :: maskingtype !! Type of masking |
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| 254 | !! 'nomask': no-mask is applied |
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| 255 | !! 'mbelow': take values below maskvals(1) |
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| 256 | !! 'mabove': take values above maskvals(1) |
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| 257 | !! 'msumrange': take values within 2 ranges; |
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| 258 | !! maskvals(2) <= SUM(vals(k)) <= maskvals(1) |
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| 259 | !! maskvals(1) < SUM(vals(k)) <= maskvals(3) |
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| 260 | !! (normalized by maskvals(3)) |
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| 261 | !! 'var': mask values are taken from a |
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| 262 | !! variable inside the file (>0) |
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| 263 | REAL(r_std), DIMENSION(3) :: maskvals !! values to use to mask (according to |
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| 264 | !! `maskingtype') |
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| 265 | CHARACTER(LEN=250) :: namemaskvar !! name of the variable to use to mask |
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| 266 | REAL(r_std) :: chem_norefinf !! No value |
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| 267 | REAL(r_std) :: chem_default !! Default value |
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| 268 | |
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| 269 | !_ ================================================================================================================================ |
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| 270 | |
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| 271 | ALLOCATE (pulse(kjpindex),stat=ier) |
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| 272 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable pulse','','') |
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| 273 | pulse(:) = un |
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| 274 | |
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| 275 | ! If we acount for NOx pulse emissions |
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| 276 | IF (ok_pulse_NOx) THEN |
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| 277 | |
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| 278 | ALLOCATE (ok_siesta(kjpindex),stat=ier) |
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| 279 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable ok_siesta','','') |
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| 280 | ok_siesta(:) = .FALSE. |
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| 281 | |
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| 282 | ALLOCATE (allow_pulse(kjpindex),stat=ier) |
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| 283 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable allow_pulse','','') |
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| 284 | allow_pulse(:) = .FALSE. |
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| 285 | |
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| 286 | ALLOCATE (pulseday(kjpindex),stat=ier) |
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| 287 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable pulseday','','') |
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| 288 | pulseday(:) = zero |
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| 289 | |
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| 290 | ALLOCATE (siestaday(kjpindex),stat=ier) |
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| 291 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable siestaday','','') |
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| 292 | siestaday(:) = zero |
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| 293 | |
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| 294 | ALLOCATE (pulselim(kjpindex),stat=ier) |
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| 295 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable pulselim','','') |
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| 296 | pulselim(:) = zero |
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| 297 | |
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| 298 | ALLOCATE (siestalim(kjpindex),stat=ier) |
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| 299 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable siestalim','','') |
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| 300 | siestalim(:) = zero |
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| 301 | |
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| 302 | END IF ! (ok_pulse_NOx) |
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| 303 | |
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| 304 | ! If we acount for NOx emissions by N-fertilizers |
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| 305 | IF (ok_cropsfertil_NOx) THEN |
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| 306 | |
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| 307 | ALLOCATE (area2(kjpindex),stat=ier) |
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| 308 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable area2','','') |
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| 309 | |
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| 310 | IF (grid_type==unstructured) THEN |
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| 311 | area2(:)=area(:) |
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| 312 | ELSE |
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| 313 | area2(:) = resolution(:,1)*resolution(:,2) |
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| 314 | ENDIF |
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| 315 | |
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| 316 | ALLOCATE (N_qt_WRICE_year(kjpindex),stat=ier) !! N fertilizers on wetland rice, read in file |
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| 317 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable N_qt_WRICE_year','','') |
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| 318 | N_qt_WRICE_year(:) = zero |
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| 319 | |
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| 320 | ALLOCATE (N_qt_OTHER_year(kjpindex),stat=ier) !! N fertilizers on other crops and grasses, read in file |
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| 321 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable N_qt_OTHER_year','','') |
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| 322 | N_qt_OTHER_year(:) = zero |
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| 323 | |
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| 324 | WRITE (numout,*) ' *********************** Interpolating N fertilizers files for NOx emissions... ' |
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| 325 | |
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| 326 | !Config Key = N_FERTIL_FILE |
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| 327 | !Config Desc = File name |
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| 328 | !Config If = CHEMISTRY_BVOC and NOx_FERTILIZERS_USE |
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| 329 | !Config Def = orchidee_fertilizer_1995.nc |
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| 330 | !Config Help = |
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| 331 | !Config Units = - |
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| 332 | filename = 'orchidee_fertilizer_1995.nc' |
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| 333 | CALL getin_p('N_FERTIL_FILE',filename) |
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| 334 | |
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| 335 | IF ( xios_interpolation ) THEN |
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| 336 | |
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| 337 | CALL xios_orchidee_recv_field('N_qt_WRICE_year_interp',N_qt_WRICE_year) |
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| 338 | CALL xios_orchidee_recv_field('N_qt_OTHER_year_interp',N_qt_OTHER_year) |
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| 339 | |
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| 340 | achem_wrice(:)=1 |
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| 341 | achem_other(:)=1 |
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| 342 | ELSE |
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| 343 | |
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| 344 | !! Variables for interpweight |
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| 345 | vmin = 0. |
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| 346 | vmax = 0. |
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| 347 | ! Type of calculation of cell fractions |
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| 348 | fractype = 'default' |
---|
| 349 | ! Name of the longitude and latitude in the input file |
---|
| 350 | lonname = 'lon' |
---|
| 351 | latname = 'lat' |
---|
| 352 | ! Default value when no value is get from input file |
---|
| 353 | chem_default = 0. |
---|
| 354 | ! Reference value when no value is get from input file |
---|
| 355 | chem_norefinf = 0. |
---|
| 356 | ! Should negative values be set to zero from input file? |
---|
| 357 | nonegative = .TRUE. |
---|
| 358 | ! Type of mask to apply to the input data (see header for more details) |
---|
| 359 | maskingtype = 'nomask' |
---|
| 360 | ! Values to use for the masking |
---|
| 361 | maskvals = (/ min_sechiba, undef_sechiba, undef_sechiba /) |
---|
| 362 | ! Name of the variable with the values for the mask in the input file (only if maskkingtype='var') (here not used) |
---|
| 363 | namemaskvar = '' |
---|
| 364 | |
---|
| 365 | fieldname= 'N_qt_WRICE_year' |
---|
| 366 | IF (printlev >= 1) WRITE(numout,*) "chemistry_initialize: Read and interpolate file " & |
---|
| 367 | // TRIM(filename) //" for variable N_qt_WRICE_year" |
---|
| 368 | CALL interpweight_2Dcont(kjpindex, 0, 0, lalo, resolution, neighbours, & |
---|
| 369 | contfrac, filename, fieldname, lonname, latname, vmin, vmax, nonegative, maskingtype, & |
---|
| 370 | maskvals, namemaskvar, -1, fractype, chem_default, chem_norefinf, & |
---|
| 371 | N_qt_WRICE_year, achem_wrice) |
---|
| 372 | |
---|
| 373 | fieldname= 'N_qt_OTHER_year' |
---|
| 374 | IF (printlev >= 1) WRITE(numout,*) "chemistry_initialize: Read and interpolate file " & |
---|
| 375 | // TRIM(filename) //" for variable N_qt_OTHER_year" |
---|
| 376 | CALL interpweight_2Dcont(kjpindex, 0, 0, lalo, resolution, neighbours, & |
---|
| 377 | contfrac, filename, fieldname, lonname, latname, vmin, vmax, nonegative, maskingtype, & |
---|
| 378 | maskvals, namemaskvar, -1, fractype, chem_default, chem_norefinf, & |
---|
| 379 | N_qt_OTHER_year, achem_other) |
---|
| 380 | END IF |
---|
| 381 | END IF |
---|
| 382 | |
---|
| 383 | ALLOCATE (flx_iso(kjpindex,nvm), stat=ier) |
---|
| 384 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_iso','','') |
---|
| 385 | flx_iso(:,:) = 0. |
---|
| 386 | |
---|
| 387 | ALLOCATE (flx_mono(kjpindex,nvm), stat=ier) |
---|
| 388 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_mono','','') |
---|
| 389 | flx_mono(:,:) = 0. |
---|
| 390 | |
---|
| 391 | ALLOCATE (flx_ORVOC(kjpindex,nvm), stat=ier) |
---|
| 392 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_ORVOC ','','') |
---|
| 393 | flx_ORVOC(:,:) = 0. |
---|
| 394 | |
---|
| 395 | ALLOCATE (flx_MBO(kjpindex,nvm), stat=ier) |
---|
| 396 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_MBO','','') |
---|
| 397 | flx_MBO(:,:) = 0. |
---|
| 398 | |
---|
| 399 | ALLOCATE (flx_methanol(kjpindex,nvm), stat=ier) |
---|
| 400 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_methanol','','') |
---|
| 401 | flx_methanol(:,:) = 0. |
---|
| 402 | |
---|
| 403 | ALLOCATE (flx_acetone(kjpindex,nvm), stat=ier) |
---|
| 404 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_acetone','','') |
---|
| 405 | flx_acetone(:,:) = 0. |
---|
| 406 | |
---|
| 407 | ALLOCATE (flx_acetal(kjpindex,nvm), stat=ier) |
---|
| 408 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_acetal','','') |
---|
| 409 | flx_acetal(:,:) = 0. |
---|
| 410 | |
---|
| 411 | ALLOCATE (flx_formal(kjpindex,nvm), stat=ier) |
---|
| 412 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_formal','','') |
---|
| 413 | flx_formal(:,:) = 0. |
---|
| 414 | |
---|
| 415 | ALLOCATE (flx_acetic(kjpindex,nvm), stat=ier) |
---|
| 416 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_acetic','','') |
---|
| 417 | flx_acetic(:,:) = 0. |
---|
| 418 | |
---|
| 419 | ALLOCATE (flx_formic(kjpindex,nvm), stat=ier) |
---|
| 420 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_formic','','') |
---|
| 421 | flx_formic(:,:) = 0. |
---|
| 422 | |
---|
| 423 | ALLOCATE (flx_no_soil(kjpindex,nvm), stat=ier) |
---|
| 424 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_no_soil','','') |
---|
| 425 | flx_no_soil(:,:) = 0. |
---|
| 426 | |
---|
| 427 | ALLOCATE (flx_no(kjpindex,nvm), stat=ier) |
---|
| 428 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_no','','') |
---|
| 429 | flx_no(:,:) = 0. |
---|
| 430 | |
---|
| 431 | ALLOCATE (flx_fertil_no(kjpindex,nvm), stat=ier) |
---|
| 432 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_fertil_no','','') |
---|
| 433 | flx_fertil_no(:,:) = 0. |
---|
| 434 | |
---|
| 435 | ALLOCATE (flx_apinen(kjpindex,nvm), stat=ier) |
---|
| 436 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_apinen','','') |
---|
| 437 | flx_apinen(:,:) = 0. |
---|
| 438 | |
---|
| 439 | ALLOCATE (flx_bpinen (kjpindex,nvm), stat=ier) |
---|
| 440 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_bpinen','','') |
---|
| 441 | flx_bpinen(:,:) = 0. |
---|
| 442 | |
---|
| 443 | ALLOCATE (flx_limonen (kjpindex,nvm), stat=ier) |
---|
| 444 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_limonen','','') |
---|
| 445 | flx_limonen(:,:) = 0. |
---|
| 446 | |
---|
| 447 | ALLOCATE (flx_myrcen(kjpindex,nvm), stat=ier) |
---|
| 448 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_myrcen','','') |
---|
| 449 | flx_myrcen(:,:) = 0. |
---|
| 450 | |
---|
| 451 | ALLOCATE (flx_sabinen(kjpindex,nvm), stat=ier) |
---|
| 452 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_sabinen','','') |
---|
| 453 | flx_sabinen(:,:) = 0. |
---|
| 454 | |
---|
| 455 | ALLOCATE (flx_camphen(kjpindex,nvm), stat=ier) |
---|
| 456 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_camphen','','') |
---|
| 457 | flx_camphen(:,:) = 0. |
---|
| 458 | |
---|
| 459 | ALLOCATE (flx_3caren(kjpindex,nvm), stat=ier) |
---|
| 460 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_3caren','','') |
---|
| 461 | flx_3caren(:,:) = 0. |
---|
| 462 | |
---|
| 463 | ALLOCATE (flx_tbocimen(kjpindex,nvm), stat=ier) |
---|
| 464 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_tbocimen','','') |
---|
| 465 | flx_tbocimen(:,:) = 0. |
---|
| 466 | |
---|
| 467 | ALLOCATE (flx_othermono(kjpindex,nvm), stat=ier) |
---|
| 468 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_othermono','','') |
---|
| 469 | flx_othermono(:,:) = 0. |
---|
| 470 | |
---|
| 471 | ALLOCATE (flx_sesquiter(kjpindex,nvm), stat=ier) |
---|
| 472 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable flx_sesquiter','','') |
---|
| 473 | flx_sesquiter(:,:) = 0. |
---|
| 474 | |
---|
| 475 | ALLOCATE(CRF(kjpindex,nvm), stat=ier) |
---|
| 476 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_init','Problem in allocate of variable CRF ','','') |
---|
| 477 | CRF(:,:) = 0. |
---|
| 478 | |
---|
| 479 | |
---|
| 480 | ! If we acount for NOx emissions due to Biomass Burning |
---|
| 481 | IF (ok_bbgfertil_NOx) THEN |
---|
| 482 | |
---|
| 483 | ALLOCATE (flx_co2_bbg_year(kjpindex),stat=ier) !! CO2 emissions from bbg, read in file |
---|
| 484 | IF (ier /= 0) CALL ipslerr_p(3,'chemistry_initialize','Problem in allocate of variable flx_co2_bbg_year','','') |
---|
| 485 | flx_co2_bbg_year(:) = zero |
---|
| 486 | |
---|
| 487 | WRITE (numout,*) ' *********************** Interpolating CO2 bbg files for NOx emissions... ' |
---|
| 488 | !Config Key = N_FERTIL_FILE |
---|
| 489 | !Config Desc = File name |
---|
| 490 | !Config If = CHEMISTRY_BVOC and NOx_FERTILIZERS_USE |
---|
| 491 | !Config Def = orchidee_fertilizer_1995.nc |
---|
| 492 | !Config Help = ... |
---|
| 493 | !Config Units = - |
---|
| 494 | filename = 'orchidee_bbg_clim.nc' |
---|
| 495 | CALL getin_p('CO2_BBG_FILE',filename) |
---|
| 496 | |
---|
| 497 | IF (xios_interpolation) THEN |
---|
| 498 | |
---|
| 499 | CALL xios_orchidee_recv_field('flx_co2_bbg_year_interp',flx_co2_bbg_year) |
---|
| 500 | |
---|
| 501 | achem_co2(:)=1 |
---|
| 502 | ELSE |
---|
| 503 | |
---|
| 504 | !! Variables for interpweight |
---|
| 505 | vmin = 0. |
---|
| 506 | vmax = 0. |
---|
| 507 | ! Type of calculation of cell fractions |
---|
| 508 | fractype = 'default' |
---|
| 509 | ! Name of the longitude and latitude in the input file |
---|
| 510 | lonname = 'lon' |
---|
| 511 | latname = 'lat' |
---|
| 512 | ! Default value when no value is get from input file |
---|
| 513 | chem_default = 0. |
---|
| 514 | ! Reference value when no value is get from input file |
---|
| 515 | chem_norefinf = 0. |
---|
| 516 | ! Should negative values be set to zero from input file? |
---|
| 517 | nonegative = .TRUE. |
---|
| 518 | ! Type of mask to apply to the input data (see header for more details) |
---|
| 519 | maskingtype = 'nomask' |
---|
| 520 | ! Values to use for the masking |
---|
| 521 | maskvals = (/ min_sechiba, undef_sechiba, undef_sechiba /) |
---|
| 522 | ! Name of the variable with the values for the mask in the input file (only if maskkingtype='var') (here not used) |
---|
| 523 | namemaskvar = '' |
---|
| 524 | |
---|
| 525 | fieldname = 'flx_co2_bbg_year' |
---|
| 526 | IF (printlev >= 1) WRITE(numout,*) "chemistry_initialize: Read and interpolate file " & |
---|
| 527 | // TRIM(filename) //" for variable flx_co2_bbg_year" |
---|
| 528 | CALL interpweight_2Dcont(kjpindex, 0, 0, lalo, resolution, neighbours, & |
---|
| 529 | contfrac, filename, fieldname, lonname, latname, vmin, vmax, nonegative, maskingtype, & |
---|
| 530 | maskvals, namemaskvar, -1, fractype, chem_default, chem_norefinf, & |
---|
| 531 | flx_co2_bbg_year, achem_co2) |
---|
| 532 | END IF |
---|
| 533 | END IF |
---|
| 534 | |
---|
| 535 | IF ( OFF_LINE_MODE ) THEN |
---|
| 536 | |
---|
| 537 | !- |
---|
| 538 | !- What are the alowed options for the temporal interpolation |
---|
| 539 | !- |
---|
| 540 | ! ALLOW_WEATHERGEN : Allow weather generator to create data |
---|
| 541 | ! This parameter is already read in the driver |
---|
| 542 | allow_weathergen = .FALSE. |
---|
| 543 | CALL getin_p('ALLOW_WEATHERGEN',allow_weathergen) |
---|
| 544 | |
---|
| 545 | ! FORCING_FILE : Name of file containing the forcing data |
---|
| 546 | ! This parameter is already read in the driver |
---|
| 547 | filename='forcing_file.nc' |
---|
| 548 | CALL getin_p('FORCING_FILE',filename) |
---|
| 549 | CALL flininfo(filename,iml, jml, lml, tml, force_id) |
---|
| 550 | WRITE(numout,*) 'Number of data per year in forcing file :', tml |
---|
| 551 | CALL flinclo(force_id) |
---|
| 552 | WRITE(numout,*) 'Forcing file closed in chemistry_initialize' |
---|
| 553 | |
---|
| 554 | |
---|
| 555 | IF ( allow_weathergen ) THEN |
---|
| 556 | WRITE(numout,*) '**chemistry_initialize: Using weather generator, careful to precip division for NOx ' |
---|
| 557 | nbre_precip = un |
---|
| 558 | WRITE(numout,*) 'Division pour les precip, NOx:', nbre_precip |
---|
| 559 | ELSE |
---|
| 560 | WRITE(numout,*) 'DT_SECHIBA :', dt_sechiba |
---|
| 561 | nbre_precip = (one_day/dt_sechiba)/(tml/one_year) |
---|
| 562 | WRITE(numout,*) 'Division pour les precip, NOx:', nbre_precip |
---|
| 563 | END IF |
---|
| 564 | |
---|
| 565 | ELSE ! (in coupled mode) |
---|
| 566 | |
---|
| 567 | nbre_precip = un |
---|
| 568 | |
---|
| 569 | END IF ! (OFF_LINE_MODE) |
---|
| 570 | |
---|
| 571 | ! Write diagnostics |
---|
| 572 | IF (ok_cropsfertil_NOx) THEN |
---|
| 573 | CALL xios_orchidee_send_field("achem_wrice",achem_wrice) |
---|
| 574 | CALL xios_orchidee_send_field("achem_other",achem_other) |
---|
| 575 | CALL xios_orchidee_send_field("interp_diag_N_qt_WRICE_year",N_qt_WRICE_year) |
---|
| 576 | CALL xios_orchidee_send_field("interp_diag_N_qt_OTHER_year",N_qt_OTHER_year) |
---|
| 577 | |
---|
| 578 | END IF |
---|
| 579 | IF (ok_bbgfertil_NOx) THEN |
---|
| 580 | CALL xios_orchidee_send_field("achem_co2",achem_co2) |
---|
| 581 | CALL xios_orchidee_send_field("interp_diag_flx_co2_bbg_year",flx_co2_bbg_year) |
---|
| 582 | END IF |
---|
| 583 | |
---|
| 584 | |
---|
| 585 | END SUBROUTINE chemistry_initialize |
---|
| 586 | |
---|
| 587 | |
---|
| 588 | !! ================================================================================================================================ |
---|
| 589 | !! SUBROUTINE : chemistry_bvoc |
---|
| 590 | !! |
---|
| 591 | !>\BRIEF This subroutine computes biogenic emissions of reactive compounds, that is of |
---|
| 592 | !! VOCs (volatile organic compounds) from vegetation and NOx (nitrogen oxides) from soils. |
---|
| 593 | !! Calculation are mostly based on the works by Guenther et al. (1995) and Yienger and Levy (1995).\n |
---|
| 594 | !! |
---|
| 595 | !! DESCRIPTION : Biogenic VOC emissions from vegetation are based on the parameterisations developped by |
---|
| 596 | !! Guenther et al. (1995). Biogenic VOCs considered here are: isoprene, monoterpenes, OVOC and ORVOC |
---|
| 597 | !! as bulked emissions, methanol, acetone, acetaldehyde, formaldehyde, acetic acid, formic acid |
---|
| 598 | !! as single emissions.\n |
---|
| 599 | !! For every biogenic VOCs an emission factor (EF), depending on the PFT considered, is used.\n |
---|
| 600 | !! Isoprene emissions depend on temperature and radiation. A partition between sunlit and shaded |
---|
| 601 | !! leaves is taken into account and either one (if ok_multilayer = FALSE) or several layers |
---|
| 602 | !! (if ok_multilayer = TRUE) in the canopy can be used.\n |
---|
| 603 | !! When radiation extinction is considered, the canopy radiative transfer model takes into |
---|
| 604 | !! account light extinction through canopy, calculating first need diffuse and direct radiation |
---|
| 605 | !! based on Andrew Friend 2001 radiative model and Spitters et al. 1986. The calculation of lai, |
---|
| 606 | !! parscat, parsh and parsun, laisun and laishabsed based on Guenther et al.(JGR, 1995) and Norman (1982).\n |
---|
| 607 | !! Emissions for other BVOCs (monoterpenes, OVOC, ORVOC and other single compounds such as |
---|
| 608 | !! methanol, acetone...) depend only on temperature.\n |
---|
| 609 | !! The impact of leaf age, using an emission activity prescribed for each of the 4 leaf age |
---|
| 610 | !! classes can also be considered for isoprene and methanol emissions when ok_leafage = TRUE.\n |
---|
| 611 | !! NOx emissions from soils are based on Yienger and Levy (1995) and depend on soil moisture |
---|
| 612 | !! and temperature and PFT. The pulse effect, related to significant rain occuring after severe |
---|
| 613 | !! drought can also be considered (ok_pulse_NOx = TRUE), as well as the increase in emissions related to |
---|
| 614 | !! biomass buring (ok_bbgfertil_NOx = TRUE) or use of fertilizers (ok_cropsfertil_NOx = TRUE). |
---|
| 615 | !! A net NO flux is eventually calculated taking into account loss by deposition on the surface, using |
---|
| 616 | !! a Canopy Reduction Factor (CRF) based on stomatal and leaf area.\n |
---|
| 617 | !! This subroutine is called by diffuco_main only if biogenic emissions are activated |
---|
| 618 | !! for sechiba (flag CHEMISTRY_BVOC=TRUE).\n |
---|
| 619 | !! |
---|
| 620 | !! RECENT CHANGE(S): Changed name from diffuco_inca to chemistry_bvoc |
---|
| 621 | !! |
---|
| 622 | !! MAIN OUTPUT VARIABLE(S): :: PAR, :: PARsun, :: PARsh, :: laisun, :: laish, |
---|
| 623 | !! :: flx_iso, :: flx_mono, :: flx_ORVOC, :: flx_MBO, |
---|
| 624 | !! :: flx_methanol, :: flx_acetone, :: flx_acetal, :: flx_formal, |
---|
| 625 | !! :: flx_acetic, :: flx_formic, :: flx_no_soil, :: flx_no, |
---|
| 626 | !! :: CRF, :: flx_fertil_no, :: Trans, :: Fdf, |
---|
| 627 | !! :: PARdf, :: PARdr, :: PARsuntab, :: PARshtab |
---|
| 628 | !! |
---|
| 629 | !! REFERENCE(S) : |
---|
| 630 | !! - Andrew Friend (2001), Modelling canopy CO2 fluxes: are 'big-leaf' simplifications justified? |
---|
| 631 | !! Global Ecology and Biogeography, 10, 6, 603-619, doi: 10.1046/j.1466-822x.2001.00268.x |
---|
| 632 | !! - Spitters, C.J.T, Toussaint, H.A.J.M, Groudriaan, J. (1986), Separating the diffuse and direct |
---|
| 633 | !! component of global radiation and its implications for modeling canopy photosynthesis, Agricultural |
---|
| 634 | !! and Forest Meteorology, 38, 1-3, 217-229, doi:10.1016/0168-1923(86)90060-2 |
---|
| 635 | !! - Norman JM (1982) Simulation of microclimates. In: Hatfield JL, Thomason IJ (eds) |
---|
| 636 | !! Biometeorology in integrated pest management. Academic, New York, pp 65â99 |
---|
| 637 | !! - Guenther, A., Hewitt, C. N., Erickson, D., Fall, R., Geron, C., Graedel, T., Harley, P., |
---|
| 638 | !! Klinger, L., Lerdau, M., McKay, W. A., Pierce, T., Scholes, B., Steinbrecher, R., Tallamraju, |
---|
| 639 | !! R., Taylor, J. et Zimmerman, P. (1995), A global model of natural volatile organic compound |
---|
| 640 | !! emissions, J. Geophys. Res., 100, 8873-8892. |
---|
| 641 | !! - MacDonald, R. et Fall, R. (1993), Detection of substantial emissions of methanol from |
---|
| 642 | !! plants to the atmosphere, Atmos. Environ., 27A, 1709-1713. |
---|
| 643 | !! - Guenther, A., Geron, C., Pierce, T., Lamb, B., Harley, P. et Fall, R. (2000), Natural emissions |
---|
| 644 | !! of non-methane volatile organic compounds, carbon monoxide, and oxides of nitrogen from |
---|
| 645 | !! North America, Atmos. Environ., 34, 2205-2230. |
---|
| 646 | !! - Yienger, J. J. et Levy II, H. (1995), Empirical model of global soil-biogenic NOx emissions, |
---|
| 647 | !! J. Geophys. Res., 100, 11,447-11,464. |
---|
| 648 | !! - Lathiere, J., D.A. Hauglustaine, A. Friend, N. De Noblet-Ducoudre, N. Viovy, and |
---|
| 649 | !! G. Folberth (2006), Impact of climate variability and land use changes on global biogenic volatile |
---|
| 650 | !! organic compound emissions, Atmospheric Chemistry and Physics, 6, 2129-2146. |
---|
| 651 | !! - Lathiere, J., D.A. Hauglustaine, N. De Noblet-Ducoudre, G. Krinner et G.A. Folberth (2005), |
---|
| 652 | !! Past and future changes in biogenic volatile organic compound emissions simulated with a global |
---|
| 653 | !! dynamic vegetation model, Geophysical Research Letters, 32, doi: 10.1029/2005GL024164. |
---|
| 654 | !! - Lathiere, J. (2005), Evolution des emissions de composes organiques et azotes par la biosphere |
---|
| 655 | !! continentale dans le modele LMDz-INCA-ORCHIDEE, These de doctorat, Universite Paris VI. |
---|
| 656 | !! |
---|
| 657 | !! FLOWCHART : None |
---|
| 658 | !_ ================================================================================================================================ |
---|
| 659 | |
---|
| 660 | SUBROUTINE chemistry_bvoc (kjpindex, swdown, coszang, temp_air, & |
---|
| 661 | temp_sol, ptnlev1, precip_rain, humrel, veget_max, lai, & |
---|
| 662 | frac_age, lalo, ccanopy, cim, wind, snow, & |
---|
| 663 | veget, hist_id, hist2_id,kjit, index, & |
---|
| 664 | indexlai, indexveg) |
---|
| 665 | |
---|
| 666 | !! 0. Variables and parameter declaration |
---|
| 667 | |
---|
| 668 | !! 0.1 Input variables |
---|
| 669 | |
---|
| 670 | INTEGER(i_std), INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
---|
| 671 | INTEGER(i_std), INTENT(in) :: kjit !! Time step number (-) |
---|
| 672 | INTEGER(i_std),INTENT (in) :: hist_id !! History file identifier (-) |
---|
| 673 | INTEGER(i_std),INTENT (in) :: hist2_id !! History file 2 identifier (-) |
---|
| 674 | INTEGER(i_std),DIMENSION (kjpindex), INTENT (in) :: index !! Indeces of the points on the map (-) |
---|
| 675 | INTEGER(i_std),DIMENSION (kjpindex*(nlai+1)), INTENT (in) :: indexlai !! Indeces of the points on the 3D map |
---|
| 676 | INTEGER(i_std),DIMENSION (kjpindex*nvm), INTENT (in) :: indexveg !! Indeces of the points on the 3D map (-) |
---|
| 677 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: swdown !! Down-welling surface short-wave flux |
---|
| 678 | !! (W.m^{-2}) |
---|
| 679 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: coszang !! Cosine of the solar zenith angle (unitless) |
---|
| 680 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: temp_air !! Air temperature (K) |
---|
| 681 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: temp_sol !! Skin temperature (K) |
---|
| 682 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: ptnlev1 !! 1st level of soil temperature (K) |
---|
| 683 | REAL(r_std), DIMENSION(kjpindex), INTENT(in) :: precip_rain !! Rain precipitation !!?? init |
---|
| 684 | REAL(r_std), DIMENSION(kjpindex,nvm), INTENT(in) :: humrel !! Soil moisture stress (0-1, unitless) |
---|
| 685 | REAL(r_std), DIMENSION(kjpindex,nvm), INTENT(in) :: veget_max !! Max. vegetation fraction (0-1, unitless) |
---|
| 686 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: snow !! Snow mass (kg) |
---|
| 687 | REAL(r_std),DIMENSION (kjpindex,nvm), INTENT (in) :: veget !! Fraction of vegetation type (-) |
---|
| 688 | REAL(r_std), DIMENSION(kjpindex,nvm), INTENT(in) :: lai !! Leaf area index (m^2.m^{-2}) |
---|
| 689 | REAL(r_std), DIMENSION(kjpindex,nvm,nleafages), INTENT(in) :: frac_age !! Age efficacity from STOMATE for iso |
---|
| 690 | REAL(r_std), DIMENSION(kjpindex,2), INTENT(in) :: lalo !! Geographical coordinates for pixels (degrees) |
---|
| 691 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: ccanopy !! CO2 concentration inside the canopy |
---|
| 692 | REAL(r_std),DIMENSION (kjpindex,nvm), INTENT (in) :: cim !! Intercellular CO2 over nlai |
---|
| 693 | REAL(r_std), DIMENSION (kjpindex), INTENT(in) :: wind !! Wind module (m s^{-1}) |
---|
| 694 | |
---|
| 695 | !! 0.2 Output variables |
---|
| 696 | |
---|
| 697 | !! 0.3 Modified variables |
---|
| 698 | |
---|
| 699 | !! 0.4 Local variables |
---|
| 700 | |
---|
| 701 | INTEGER(i_std) :: ji, jv, jf, jl !! Indices (unitless) |
---|
| 702 | REAL(r_std), DIMENSION(kjpindex,nvm) :: fol_dens !! foliar density (gDM.m^{-2}) |
---|
| 703 | REAL(r_std), DIMENSION(kjpindex) :: tleaf !! Foliar temperature (K) |
---|
| 704 | REAL(r_std), DIMENSION(kjpindex) :: t_no !! Temperature used for soil NO emissions (C) |
---|
| 705 | REAL(r_std), DIMENSION(kjpindex) :: exp_1 !! First exponential used in the calculation of |
---|
| 706 | !! isoprene dependancy to Temperature |
---|
| 707 | REAL(r_std), DIMENSION(kjpindex) :: exp_2 !! Second exponential used in the calculation of |
---|
| 708 | !! Isoprene dependancy to Temperature |
---|
| 709 | REAL(r_std), DIMENSION(kjpindex) :: Ct_iso !! Isoprene dependancy to Temperature |
---|
| 710 | REAL(r_std), DIMENSION(kjpindex) :: Cl_iso !! Isoprene dependancy to Light |
---|
| 711 | REAL(r_std), DIMENSION(kjpindex) :: Ct_mono !! Monoterpene dependancy to Temperature |
---|
| 712 | REAL(r_std), DIMENSION(kjpindex) :: Ct_sesq !! Sesquiterpenes dependancy to Temperature |
---|
| 713 | REAL(r_std), DIMENSION(kjpindex) :: Ct_meth !! Methanol dependancy to Temperature |
---|
| 714 | REAL(r_std), DIMENSION(kjpindex) :: Ct_acet !! Acetone dependancy to Temperature |
---|
| 715 | REAL(r_std), DIMENSION(kjpindex) :: Ct_oxyVOC !! Other oxygenated BVOC dependancy to Temperature |
---|
| 716 | REAL(r_std) :: GAMMA_iso !! Temperature and light dependancy for isoprene and fo each PFT |
---|
| 717 | REAL(r_std) :: GAMMA_iso_m !! Temperature and light dependancy for isoprene and fo each PFT for multilayer |
---|
| 718 | REAL(r_std), DIMENSION(kjpindex) :: Ylt_mono !! Total Temperature and light dependancy for monoterpenes |
---|
| 719 | REAL(r_std), DIMENSION(kjpindex) :: Ylt_sesq !! Total Temperature and light dependancy for sesquiterpens |
---|
| 720 | REAL(r_std), DIMENSION(kjpindex) :: Ylt_meth !! Total Temperature and light dependancy for methanol |
---|
| 721 | REAL(r_std), DIMENSION(kjpindex) :: Ylt_acet !! Total Temperature and light dependancy for acetone |
---|
| 722 | REAL(r_std), DIMENSION(kjpindex) :: Ct_MBO !! MBO dependance to Temperature |
---|
| 723 | REAL(r_std), DIMENSION(kjpindex) :: Cl_MBO !! MBO dependance to Light |
---|
| 724 | REAL(r_std), DIMENSION(kjpindex) :: Xvar !! Parameter used in the calculation |
---|
| 725 | !! of MBO dependance to Temperature |
---|
| 726 | REAL(r_std), DIMENSION(kjpindex,nvm) :: flx_OVOC !! Biogenic OVOC emission - |
---|
| 727 | !! Other Volatil Organic Components (kgC.m^{-2}.s^{-1}) |
---|
| 728 | !!Canopy radiative transfer model |
---|
| 729 | REAL(r_std), DIMENSION(kjpindex) :: So !! Maximum radiation at the Earth surface (W.m^{-2}) |
---|
| 730 | REAL(r_std), DIMENSION(kjpindex) :: Rfrac !! Parameter in the regression of diffuse |
---|
| 731 | !! share on transmission |
---|
| 732 | REAL(r_std), DIMENSION(kjpindex) :: Kfrac !! Parameter in the regression of diffuse |
---|
| 733 | !! share on transmission |
---|
| 734 | REAL(r_std), DIMENSION(kjpindex) :: swdf !! Sw diffuse radiation (W.m^{-2}) |
---|
| 735 | REAL(r_std), DIMENSION(kjpindex) :: swdr !! Sw direct radiation (W.m^{-2}) |
---|
| 736 | REAL(r_std), DIMENSION(kjpindex,nvm) :: PARscat !! Scatter PAR @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 737 | REAL(r_std), DIMENSION(kjpindex,nvm) :: Clsun_iso !! Isoprene dependance to light for sun leaves |
---|
| 738 | REAL(r_std), DIMENSION(kjpindex,nvm) :: Clsh_iso !! Isoprene dependance to light for shaded leaves |
---|
| 739 | !! for multilayer canopy model for iso flux |
---|
| 740 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: PARscattab !! Scatter PAR @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 741 | REAL(r_std), DIMENSION(nlai+1) :: laitab !! LAI per layer (m^2.m^{-2}) |
---|
| 742 | REAL(r_std), DIMENSION(kjpindex,nlai) :: laisuntabdep !! LAI of sun leaves in each layer (m^2.m^{-2}) |
---|
| 743 | REAL(r_std), DIMENSION(kjpindex,nlai) :: laishtabdep !! LAI of shaded leaves in each layer |
---|
| 744 | !! (m^2.m^{-2}) |
---|
| 745 | REAL(r_std) :: Clsun_iso_tab !! Isoprene dependance to light |
---|
| 746 | !! for sun leaves and per layer |
---|
| 747 | REAL(r_std) :: Clsh_iso_tab !! Isoprene dependance to light |
---|
| 748 | !! for shaded leaves and per layer |
---|
| 749 | !for multilayer canopy model Spitter et al. 1986 |
---|
| 750 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: PARnotscat !! Not-Scattered PAR |
---|
| 751 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: PARabsdir !! Absorbed light of the PAR direct flux |
---|
| 752 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: PARabsdiff !! Absorbed light of the PAR diffuse flux |
---|
| 753 | REAL(r_std), PARAMETER :: sigma = 0.20 !! scattering coefficient of single leaves and for visible radiation |
---|
| 754 | REAL(r_std), PARAMETER :: cluster = 0.85 !! clustering coefficient for leaves, the same that is setting for default in MEGAN V2.10 |
---|
| 755 | REAL(r_std) :: rho !! reflection index of a green, closed vegetation |
---|
| 756 | REAL(r_std) :: kbl !! extinction coefficient of black leaves |
---|
| 757 | REAL(r_std) :: kdf !! extinction coefficient of diffuse flux |
---|
| 758 | !!Leaf age |
---|
| 759 | REAL(r_std), DIMENSION(kjpindex,nvm) :: Eff_age_iso !! Isoprene emission dependance to Leaf Age |
---|
| 760 | REAL(r_std), DIMENSION(kjpindex,nvm) :: Eff_age_meth !! Methanol emission dependance to Leaf Age |
---|
| 761 | REAL(r_std), DIMENSION(kjpindex,nvm) :: Eff_age_VOC !! Other VOC emission dependance to Leaf Age |
---|
| 762 | !!BBG and Fertilizers for NOx soil emission |
---|
| 763 | REAL(r_std), DIMENSION(kjpindex) :: veget_max_nowoody !! sum of veget_max for non-woody PFT |
---|
| 764 | REAL(r_std), DIMENSION(kjpindex,nvm) :: N_qt_WRICE_pft !! N fertiliser on RICE |
---|
| 765 | !! (kgN per year per grid cell) |
---|
| 766 | REAL(r_std), DIMENSION(kjpindex,nvm) :: N_qt_OTHER_pft !! N fertiliser on other veg |
---|
| 767 | !! (kgN per year per grid cell) |
---|
| 768 | !! CO2 inhibition effect on isoprene |
---|
| 769 | REAL(r_std),DIMENSION (kjpindex,nvm) :: fco2_wshort !! Wilkinson short term function for CO2 impact on BVOC (isoprene) |
---|
| 770 | REAL(r_std),DIMENSION (kjpindex) :: fco2_wlong !! Wilkinson long term function for CO2 impact on BVOC (isoprene) |
---|
| 771 | REAL(r_std) :: fco2_ctrl |
---|
| 772 | REAL(r_std),DIMENSION (kjpindex,nvm) :: fco2 !! Function for CO2 impact on BVOC (isoprene) |
---|
| 773 | REAL(r_std), DIMENSION(kjpindex) :: Ismax_short |
---|
| 774 | REAL(r_std), DIMENSION(kjpindex) :: h_short |
---|
| 775 | REAL(r_std), DIMENSION(kjpindex) :: Cstar_short |
---|
| 776 | REAL(r_std) :: Ismax_long |
---|
| 777 | REAL(r_std) :: h_long |
---|
| 778 | REAL(r_std) :: Cstar_long |
---|
| 779 | |
---|
| 780 | !! 0.5 Parameters values |
---|
| 781 | |
---|
| 782 | REAL(r_std), PARAMETER :: CT1 = 95000.0 !! Empirical coeffcient (see Guenther .et. al, 1995, eq(10)) (J.mol^{-1}) |
---|
| 783 | REAL(r_std), PARAMETER :: CT2 = 230000.0 !! Empirical coefficient (see Guenther .et. al, 1995, eq(10)) (J.mol^{-1}) |
---|
| 784 | REAL(r_std), PARAMETER :: TS = 303.0 !! Leaf temperature at standard condition |
---|
| 785 | !! (see Guenther .et. al, 1995, eq(10)) (K) |
---|
| 786 | REAL(r_std), PARAMETER :: TM = 314.0 !! Leaf temperature (see Guenther .et. al, 1995, eq(10)) (K) |
---|
| 787 | |
---|
| 788 | REAL(r_std), PARAMETER :: alpha_ = 0.0027 !! Empirical coeffcient (see Guenther .et. al, 1995, eq(9)) (unitless) |
---|
| 789 | REAL(r_std), PARAMETER :: CL1 = 1.066 !! Empirical coeffcient (see Guenther .et. al, 1995, eq(9)) (unitless) |
---|
| 790 | REAL(r_std), PARAMETER :: beta = 0.09 !! Empirical coeffcient (see Guenther .et. al, 1995, eq(11)) (K^{-1}) |
---|
| 791 | REAL(r_std), PARAMETER :: lai_threshold = 11. !! Lai threshold for the calculation of scattered radiation |
---|
| 792 | !! based on Guenther .et. al (1995) (m^2.m^{-2}) |
---|
| 793 | |
---|
| 794 | |
---|
| 795 | ! Biogenic emissions |
---|
| 796 | REAL(r_std),DIMENSION(kjpindex) :: PAR !! Photosynthetic active radiation, half of swdown |
---|
| 797 | !! @tex ($\mu mol photons. m^{-2} s^{-1}$) @endtex |
---|
| 798 | REAL(r_std),DIMENSION(kjpindex,nvm) :: PARsun !! PAR received by sun leaves |
---|
| 799 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 800 | REAL(r_std),DIMENSION(kjpindex,nvm) :: PARsh !! PAR received by shaded leaves |
---|
| 801 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 802 | REAL(r_std),DIMENSION(kjpindex,nvm) :: laisun !! Leaf area index of Sun leaves (m^2.m^{-2}) |
---|
| 803 | REAL(r_std),DIMENSION(kjpindex,nvm) :: laish !! Leaf area index of Shaded leaves (m^2.m^{-2}) |
---|
| 804 | |
---|
| 805 | CHARACTER(LEN=14) :: tleafsun_name !! To store variables names for I/O |
---|
| 806 | CHARACTER(LEN=13) :: tleafsh_name !! To store variables names for I/O |
---|
| 807 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: Tleafsun_temp !! temporary sunlit leaf temperature matrix for writing |
---|
| 808 | REAL(r_std), DIMENSION(kjpindex,nlai+1) :: Tleafsh_temp !! temporary shade leaf temperature matrix for writing |
---|
| 809 | REAL(r_std),DIMENSION(kjpindex) :: Fdf !! Fraction of the radiation which is diffused (0-1, unitless) |
---|
| 810 | REAL(r_std),DIMENSION(kjpindex,nlai+1) :: PARsuntab !! PAR received by sun leaves over LAI layers |
---|
| 811 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 812 | REAL(r_std),DIMENSION(kjpindex,nlai+1) :: PARshtab !! PAR received by shaded leaves over LAI layers |
---|
| 813 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 814 | REAL(r_std),DIMENSION(kjpindex) :: PARdf !! Diffuse photosynthetic active radiation |
---|
| 815 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 816 | REAL(r_std),DIMENSION(kjpindex) :: PARdr !! Direct photosynthetic active radiation |
---|
| 817 | !! @tex ($\mu mol m^{-2} s^{-1}$) @endtex |
---|
| 818 | REAL(r_std),DIMENSION(kjpindex) :: Trans !! Atmospheric Transmissivity (unitless) |
---|
| 819 | |
---|
| 820 | !_ ================================================================================================================================ |
---|
| 821 | fco2 = 0. |
---|
| 822 | fco2_wshort = 0. |
---|
| 823 | fco2_wlong = 0. |
---|
| 824 | Fdf(:) = 0. |
---|
| 825 | PAR(:) = 0. |
---|
| 826 | PARsun(:,:) = 0. |
---|
| 827 | PARsh(:,:) = 0. |
---|
| 828 | laisun(:,:) = 0. |
---|
| 829 | laish(:,:) = 0. |
---|
| 830 | CRF(:,:) = 0. |
---|
| 831 | Trans(:) = 0. |
---|
| 832 | PARdf(:) = 0. |
---|
| 833 | PARdr(:) = 0. |
---|
| 834 | PARsuntab(:,:) = 0. |
---|
| 835 | PARshtab(:,:) = 0. |
---|
| 836 | |
---|
| 837 | |
---|
| 838 | !! 1. Canopy radiative transfer model |
---|
| 839 | |
---|
| 840 | !! Canopy radiative transfer model: takes into account light extinction through canopy |
---|
| 841 | !! First need to calculate diffuse and direct radiation |
---|
| 842 | !! Based on Andrew Friend radiative model (Global Ecology & Biogeography, 2001) |
---|
| 843 | !! And Spitters et al. (Agricultural and Forest Meteorology, 1986) |
---|
| 844 | |
---|
| 845 | IF ( ok_radcanopy ) THEN |
---|
| 846 | |
---|
| 847 | DO ji = 1, kjpindex |
---|
| 848 | IF (coszang(ji) .GT. zero) THEN |
---|
| 849 | !! 1.1 Extra-terrestrial solar irradiance at a plan parallel to Earh's surface |
---|
| 850 | So(ji) = Sct*( un + 0.033*COS(360.*pi/180.*julian_diff/365.))*coszang(ji) |
---|
| 851 | !! 1.2 Atmospheric transmissivity |
---|
| 852 | Trans(ji) = swdown(ji)/So(ji) |
---|
| 853 | !! 1.3 Empirical calculation of fraction diffuse from transmission based on Spitters et al. (1986) |
---|
| 854 | Rfrac(ji) = 0.847 - 1.61*coszang(ji) + 1.04*(coszang(ji)**2.) |
---|
| 855 | Kfrac(ji) = (1.47 - Rfrac(ji))/1.66 |
---|
| 856 | IF (Trans(ji) .LE. 0.22) THEN |
---|
| 857 | Fdf(ji) = un |
---|
| 858 | ELSE IF (Trans(ji) .LE. 0.35) THEN |
---|
| 859 | Fdf(ji) = un - 6.4*((Trans(ji) - 0.22)**2.) |
---|
| 860 | ELSE IF (Trans(ji) .LE. Kfrac(ji)) THEN |
---|
| 861 | Fdf(ji) = 1.47 - 1.66*Trans(ji) |
---|
| 862 | ELSE |
---|
| 863 | Fdf(ji) = Rfrac(ji) |
---|
| 864 | END IF |
---|
| 865 | !! 1.4 Direct and diffuse sw radiation in W.m^{-2} |
---|
| 866 | swdf(ji) = swdown(ji)*Fdf(ji) |
---|
| 867 | swdr(ji) = swdown(ji)*(un-Fdf(ji)) |
---|
| 868 | ELSE |
---|
| 869 | swdf(ji) = zero |
---|
| 870 | swdr(ji) = zero |
---|
| 871 | END IF |
---|
| 872 | |
---|
| 873 | !! 1.5 PAR diffuse and direct in umol/m^2/s |
---|
| 874 | PARdf(ji) = swdf(ji) * W_to_mol * RG_to_PAR |
---|
| 875 | PARdr(ji) = swdr(ji) * W_to_mol * RG_to_PAR |
---|
| 876 | END DO |
---|
| 877 | |
---|
| 878 | !! 1.6 Calculation of lai, parscat, parsh and parsun, laisun and laish !!?? define the terms |
---|
| 879 | !! Based on Guenther et al. (JGR, 1995) and Norman (1982) |
---|
| 880 | ! One-layer canopy model or multi-layer canopy model |
---|
| 881 | IF (ok_multilayer) THEN |
---|
| 882 | |
---|
| 883 | |
---|
| 884 | ! Calculation PER LAYER |
---|
| 885 | DO jl = nlai+1, 1, -1 |
---|
| 886 | laitab(jl) = laimax*(EXP(lai_level_depth*(jl-1) - un)/(EXP(lai_level_depth*nlai) - un)) |
---|
| 887 | |
---|
| 888 | !introduction of the Spitter way to calculate radiation over the levels !!!!!!! |
---|
| 889 | DO ji = 1, kjpindex |
---|
| 890 | kdf = cluster*0.8*SQRT((1 - sigma)) |
---|
| 891 | IF (ABS(ACOS(coszang(ji))) .LT. pi/2. .AND. coszang(ji) .NE. zero) THEN |
---|
| 892 | ! Coefficients calculation: |
---|
| 893 | kbl = cluster*0.5/ABS(coszang(ji)) |
---|
| 894 | rho = ((1-SQRT((1 - sigma)))/(1+SQRT((1 - sigma))))*(2/(1+1.6*ABS(coszang(ji)))) |
---|
| 895 | |
---|
| 896 | PARnotscat(ji,jl) = (1 - sigma)*PARdr(ji)*kbl*EXP(-SQRT((1 - sigma))*kbl*laitab(jl)) |
---|
| 897 | PARabsdir(ji,jl) = (1 - rho)*SQRT((1 - sigma))*PARdr(ji)*kbl*EXP(-SQRT((1 - sigma))*kbl*laitab(jl)) |
---|
| 898 | PARabsdiff(ji,jl) = (1 - rho)*PARdf(ji)*kdf*EXP(-kdf*laitab(jl)) |
---|
| 899 | PARshtab(ji,jl) = (PARabsdiff(ji,jl) + (PARabsdir(ji,jl) - PARnotscat(ji,jl)))/(1 - sigma) |
---|
| 900 | PARsuntab(ji,jl) = PARshtab(ji,jl) + (1-sigma)*kbl*PARdr(ji)/(1 - sigma) |
---|
| 901 | |
---|
| 902 | !correction using the equation (4) in Bodin et al 2012 and (7) or (8) in Spitter et al 1986 |
---|
| 903 | !using the extinction coefficient kbl = 0.5/coszang and not only 0.5 |
---|
| 904 | IF (jl .NE. nlai+1) THEN |
---|
| 905 | laisuntabdep(ji,jl) =(laitab(jl+1)-laitab(jl))*EXP(-kbl*laitab(jl)) |
---|
| 906 | laishtabdep(ji,jl) =(laitab(jl+1)-laitab(jl))*(1.-EXP(-kbl*laitab(jl))) |
---|
| 907 | ENDIF |
---|
| 908 | |
---|
| 909 | ELSE |
---|
| 910 | |
---|
| 911 | PARshtab(ji,jl) = PARdf(ji)*kdf*EXP(-kdf*laitab(jl)) |
---|
| 912 | PARsuntab(ji,jl) = 0. |
---|
| 913 | |
---|
| 914 | IF (jl .NE. nlai+1) THEN |
---|
| 915 | laisuntabdep(ji,jl) = 0. |
---|
| 916 | laishtabdep(ji,jl) = laitab(jl+1)-laitab(jl) |
---|
| 917 | |
---|
| 918 | ENDIF |
---|
| 919 | END IF |
---|
| 920 | END DO |
---|
| 921 | END DO |
---|
| 922 | |
---|
| 923 | |
---|
| 924 | |
---|
| 925 | ! introduction of the Spitter way to calculate radiation over the levels !!!!!!! |
---|
| 926 | ELSE |
---|
| 927 | ! Calculation FOR one layer |
---|
| 928 | DO jv = 1, nvm |
---|
| 929 | DO ji = 1, kjpindex |
---|
| 930 | IF (lai(ji,jv) .LE. lai_threshold) THEN |
---|
| 931 | PARscat(ji,jv) = 0.07*PARdr(ji)*(1.1 - 0.1*lai(ji,jv))*exp(-coszang(ji)) |
---|
| 932 | ELSE |
---|
| 933 | PARscat(ji,jv) = zero |
---|
| 934 | END IF |
---|
| 935 | |
---|
| 936 | IF (coszang(ji) .NE. zero ) THEN |
---|
| 937 | PARsh(ji,jv) = PARdf(ji)*exp(-0.5*((lai(ji,jv))**0.7)) + PARscat(ji,jv) |
---|
| 938 | PARsun(ji,jv) = PARdr(ji)*COS(60.*pi/180.)/coszang(ji) + PARsh(ji,jv) |
---|
| 939 | ELSE |
---|
| 940 | PARsh(ji,jv) = PARdf(ji)*exp(-0.5*(lai(ji,jv)**0.7)) + PARscat(ji,jv) |
---|
| 941 | PARsun(ji,jv) = zero |
---|
| 942 | END IF |
---|
| 943 | IF (ABS(ACOS(coszang(ji))) .LT. pi/2. .AND. ABS(coszang(ji)) .GT. min_sechiba) THEN |
---|
| 944 | ! calculation as in Lathiere (2005) = with correction removing lai in Guenther (1995) |
---|
| 945 | laisun(ji,jv) = (un - exp(-0.5*lai(ji,jv)/(coszang(ji))))*coszang(ji)/COS(60.*pi/180.) |
---|
| 946 | laish(ji,jv) = lai(ji,jv) - laisun(ji,jv) |
---|
| 947 | ELSE |
---|
| 948 | laisun(ji,jv) = zero |
---|
| 949 | laish(ji,jv) = lai(ji,jv) |
---|
| 950 | END IF |
---|
| 951 | END DO |
---|
| 952 | END DO |
---|
| 953 | ENDIF |
---|
| 954 | END IF |
---|
| 955 | |
---|
| 956 | |
---|
| 957 | !! 2. Calculation of non-PFT dependant parameters used for VOC emissions |
---|
| 958 | DO ji = 1, kjpindex ! (loop over # pixels) |
---|
| 959 | !! 2.1 Calculation of Tleaf (based on Lathiere, 2005) |
---|
| 960 | |
---|
| 961 | |
---|
| 962 | tleaf(ji) = temp_air(ji) |
---|
| 963 | |
---|
| 964 | !! 2.2 Isoprene emission dependency - with no PARsun/PARshaded partitioning - Guenther et al. (1995) and Lathiere (2005) |
---|
| 965 | !> @codeinc $$?? ecrire les equation en latex ? |
---|
| 966 | exp_1(ji) = exp( (CT1 * ( tleaf(ji) - TS )) / (RR*TS*tleaf(ji)) ) |
---|
| 967 | exp_2(ji) = exp( (CT2 *( tleaf(ji) - TM )) / (RR*TS*tleaf(ji)) ) |
---|
| 968 | PAR(ji) = swdown(ji) * W_to_mol * RG_to_PAR ! from W/m^2 to umol photons/m^2/s and half of sw for PAR |
---|
| 969 | Ct_iso(ji) = exp_1(ji)/(un + exp_2(ji)) ! temperature dependance |
---|
| 970 | Cl_iso(ji) = alpha_*CL1*PAR(ji)/sqrt(un + (alpha_**2) * (PAR(ji)**2) ) ! light dependance |
---|
| 971 | !> @endcodeinc |
---|
| 972 | |
---|
| 973 | !! 2.3 Monoterpene and oxy VOB emission dependency to Temperature |
---|
| 974 | !! light independant fraction |
---|
| 975 | !> @codeinc |
---|
| 976 | !Ct_mono(ji) = exp(beta*(tleaf(ji) - TS)) ! Old method |
---|
| 977 | Ct_mono(ji) = exp(beta_mono*(tleaf(ji) - TS)) |
---|
| 978 | Ct_sesq(ji) = exp(beta_sesq*(tleaf(ji) - TS)) |
---|
| 979 | Ct_meth(ji) = exp(beta_meth*(tleaf(ji) - TS)) |
---|
| 980 | Ct_acet(ji) = exp(beta_acet*(tleaf(ji) - TS)) |
---|
| 981 | Ct_oxyVOC(ji) = exp(beta_oxyVOC*(tleaf(ji) - TS)) |
---|
| 982 | !> @endcodeinc |
---|
| 983 | !! 2.4 MBO biogenic emissions dependency, only from PFT7 and PFT4 for location of vegetation emitter |
---|
| 984 | ! but in fact MBO fluxes only in America (ponderosa and lodgepole pines only found in these areas) |
---|
| 985 | !> @codeinc |
---|
| 986 | Xvar(ji) = ((un/312.3) - (un/tleaf(ji)))/RR |
---|
| 987 | !> @endcodeinc |
---|
| 988 | !! 2.4.1 temperature dependency |
---|
| 989 | !> @codeinc |
---|
| 990 | Ct_MBO(ji) = (1.52*209000.0*exp(67000.0*Xvar(ji)))/(209000.0 - 67000.0*(un - exp(209000.0*Xvar(ji)))) |
---|
| 991 | !> @endcodeinc |
---|
| 992 | !! 2.4.2 light dependency |
---|
| 993 | Cl_MBO(ji) = (0.0011*1.44*PAR(ji))/(sqrt(un + (0.0011**2)*(PAR(ji)**2))) |
---|
| 994 | !! 2.5 NO biogenic emissions given in ngN/m^2/s, emission factor in ngN/m^2/s too |
---|
| 995 | !! calculation of temperature used for NO soil emissions |
---|
| 996 | t_no(ji) = ptnlev1(ji) - ZeroCelsius !!temp must be in celsius to calculate no emissions |
---|
| 997 | !! 2.6 calculation of non-woody veget_max fraction |
---|
| 998 | IF (ok_cropsfertil_NOx) THEN |
---|
| 999 | veget_max_nowoody(ji) = zero |
---|
| 1000 | DO jv = 1,nvm |
---|
| 1001 | IF ( (jv /= ibare_sechiba) .AND. .NOT.(is_tree(jv)) ) THEN |
---|
| 1002 | veget_max_nowoody(ji) = veget_max_nowoody(ji) + veget_max(ji,jv) |
---|
| 1003 | ENDIF |
---|
| 1004 | ENDDO |
---|
| 1005 | END IF |
---|
| 1006 | END DO ! (loop over # pixels) |
---|
| 1007 | |
---|
| 1008 | !! 2bis. Calculation of CO2 function for inhibition effect on isoprene |
---|
| 1009 | ! 2 approaches can be used: either Possell et al. (2005) or Wilkinson et al. (2006) |
---|
| 1010 | |
---|
| 1011 | !! 19/04/2010 and then implemented in version revised by Nicolas Vuichard, 08042014 |
---|
| 1012 | !! Impact of atmospheric CO2 on isoprene emissions |
---|
| 1013 | !! Can be activated or not |
---|
| 1014 | !! If considered, can use either Possell 2005 or Wilkinson 2009 parameterisation |
---|
| 1015 | !! This is used to rescale the emission factor, considered to be measured at 350 ppm of CO2 |
---|
| 1016 | !! to the CO2 conditions of the run |
---|
| 1017 | |
---|
| 1018 | IF ( ok_co2bvoc_poss ) THEN |
---|
| 1019 | WRITE(numout,*) 'CO2 impact on isoprene: Possell calculation' |
---|
| 1020 | |
---|
| 1021 | !! Possell function needs to be normalized (experiments at 400 ppm and EF before 1995) |
---|
| 1022 | !! Normalized at 350 ppm |
---|
| 1023 | fco2_ctrl = (-0.0123+(441.4795/350.)+(-1282.65/(350.**2))) |
---|
| 1024 | |
---|
| 1025 | !! 2 tests: using the canopy (atmospheric) CO2 'ccanopy' |
---|
| 1026 | !! or the intercellular CO2 over nlai 'cim' |
---|
| 1027 | !! with cim = ccanopy*0.667 |
---|
| 1028 | !! in the end I go for ccanopy for the Possell function since too much differences |
---|
| 1029 | !! when using cim and also the function has been derived based on atmospheric CO2 |
---|
| 1030 | DO ji = 1, kjpindex |
---|
| 1031 | |
---|
| 1032 | fco2(ji,:) = (-0.0123+(441.4795/ccanopy(ji))+(-1282.65/(ccanopy(ji)*ccanopy(ji))))/fco2_ctrl |
---|
| 1033 | |
---|
| 1034 | END DO |
---|
| 1035 | ELSE IF ( ok_co2bvoc_wilk ) THEN |
---|
| 1036 | WRITE(numout,*) 'CO2 impact on isoprene: Wilkinson calculation' |
---|
| 1037 | |
---|
| 1038 | !! In the Wilkinson function, 2 impacts are considered: |
---|
| 1039 | !! -short-term impact for CO2 variation during a single day (seconds/minutes) |
---|
| 1040 | !! -long-term impact for CO2 variation during leaf-growth (weeks/month) |
---|
| 1041 | |
---|
| 1042 | |
---|
| 1043 | !! Long-term parameters |
---|
| 1044 | !! Constant |
---|
| 1045 | Ismax_long = 1.344 |
---|
| 1046 | h_long = 1.4614 |
---|
| 1047 | Cstar_long = 585. |
---|
| 1048 | !! Short-term parameters |
---|
| 1049 | !! They have to be calculated based on atmospheric CO2 |
---|
| 1050 | !! 10/05/2010 |
---|
| 1051 | !! For atmospheric CO2 lower than 400 ppm or higher than 1200 ppm |
---|
| 1052 | !! (min and max CO2 level tested for short-term effect in Wilkinson et al. 2009) |
---|
| 1053 | !! we use the parameters calculated at 400/1200 ppm. For intermediate CO2 concentration, |
---|
| 1054 | !! parameters are calculated. |
---|
| 1055 | !! Linear interpolation |
---|
| 1056 | |
---|
| 1057 | DO ji = 1, kjpindex |
---|
| 1058 | |
---|
| 1059 | IF (ccanopy(ji) .LE. 400.) THEN |
---|
| 1060 | |
---|
| 1061 | Ismax_short(ji) = 1.072 |
---|
| 1062 | h_short(ji) = 1.7 |
---|
| 1063 | Cstar_short(ji) = 1218. |
---|
| 1064 | |
---|
| 1065 | ELSE IF (ccanopy(ji) .EQ. 600.) THEN |
---|
| 1066 | |
---|
| 1067 | Ismax_short(ji) = 1.036 |
---|
| 1068 | h_short(ji) = 2.0125 |
---|
| 1069 | Cstar_short(ji) = 1150. |
---|
| 1070 | |
---|
| 1071 | ELSE IF (ccanopy(ji) .EQ. 800.) THEN |
---|
| 1072 | |
---|
| 1073 | Ismax_short(ji) = 1.046 |
---|
| 1074 | h_short(ji) = 1.5380 |
---|
| 1075 | Cstar_short(ji) = 2025. |
---|
| 1076 | |
---|
| 1077 | ELSE IF (ccanopy(ji) .GE. 1200.) THEN |
---|
| 1078 | |
---|
| 1079 | Ismax_short(ji) = 1.014 |
---|
| 1080 | h_short(ji) = 2.8610 |
---|
| 1081 | Cstar_short(ji) = 1525. |
---|
| 1082 | |
---|
| 1083 | |
---|
| 1084 | ELSE IF ((ccanopy(ji) .GT. 400.) .AND. (ccanopy(ji) .LT. 600.)) THEN |
---|
| 1085 | |
---|
| 1086 | Ismax_short(ji) = 1.036 + (ccanopy(ji)-600.)*(1.036-1.072)/(600.-400.) |
---|
| 1087 | h_short(ji) = 2.0125 + (ccanopy(ji)-600.)*(2.0125-1.7)/(600.-400.) |
---|
| 1088 | Cstar_short(ji) = 1150. + (ccanopy(ji)-600.)*(1150.-1218.)/(600.-400.) |
---|
| 1089 | |
---|
| 1090 | ELSE IF ((ccanopy(ji) .GT. 600.) .AND. (ccanopy(ji) .LT. 800.)) THEN |
---|
| 1091 | |
---|
| 1092 | Ismax_short(ji) = 1.046 + (ccanopy(ji)-800.)*(1.046-1.036)/(800.-600.) |
---|
| 1093 | h_short(ji) = 1.5380 + (ccanopy(ji)-800.)*(1.5380-2.0125)/(800.-600.) |
---|
| 1094 | Cstar_short(ji) = 2025. + (ccanopy(ji)-800.)*(2025.-1150.)/(800.-600.) |
---|
| 1095 | |
---|
| 1096 | ELSE IF ((ccanopy(ji) .GT. 800.) .AND. (ccanopy(ji) .LT. 1200.)) THEN |
---|
| 1097 | |
---|
| 1098 | Ismax_short(ji) = 1.014 + (ccanopy(ji)-1200.)*(1.014-1.046)/(1200.-800.) |
---|
| 1099 | h_short(ji) = 2.8610 + (ccanopy(ji)-1200.)*(2.8610-1.5380)/(1200.-800.) |
---|
| 1100 | Cstar_short(ji) = 1525. + (ccanopy(ji)-1200.)*(1525.-2025.)/(1200.-800.) |
---|
| 1101 | |
---|
| 1102 | |
---|
| 1103 | END IF |
---|
| 1104 | |
---|
| 1105 | END DO |
---|
| 1106 | |
---|
| 1107 | WRITE(numout,*) '***Wilkinson BVOC-CO2 function: parameters***' |
---|
| 1108 | WRITE(numout,*) 'Ismax_long: ', Ismax_long |
---|
| 1109 | WRITE(numout,*) 'h_long: ', h_long |
---|
| 1110 | WRITE(numout,*) 'Cstar_long: ', Cstar_long |
---|
| 1111 | WRITE(numout,*) 'Ismax_short: ', MAXVAL(Ismax_short(:)) , MINVAL(Ismax_short(:)) |
---|
| 1112 | WRITE(numout,*) 'h_short: ', MAXVAL(h_short(:)) , MINVAL(h_short(:)) |
---|
| 1113 | WRITE(numout,*) 'Cstar_short: ', MAXVAL(Cstar_short(:)) , MINVAL(Cstar_short(:)) |
---|
| 1114 | WRITE(numout,*) '******' |
---|
| 1115 | |
---|
| 1116 | DO ji = 1, kjpindex |
---|
| 1117 | fco2_wlong(ji) = (Ismax_long-((Ismax_long*((0.667*ccanopy(ji))**h_long))/& |
---|
| 1118 | & ((Cstar_long**h_long)+(0.667*ccanopy(ji))**h_long)))/1.06566 |
---|
| 1119 | DO jv = 1, nvm |
---|
| 1120 | fco2_wshort(ji,jv) = (Ismax_short(ji)-((Ismax_short(ji)*((cim(ji,jv))**h_short(ji)))/& |
---|
| 1121 | & ((Cstar_short(ji)**h_short(ji))+(cim(ji,jv))**h_short(ji))))/1.010803 |
---|
| 1122 | END DO |
---|
| 1123 | END DO |
---|
| 1124 | |
---|
| 1125 | DO ji = 1, kjpindex |
---|
| 1126 | DO jv = 1, nvm |
---|
| 1127 | fco2(ji,jv) = fco2_wshort(ji,jv)*fco2_wlong(ji) |
---|
| 1128 | END DO |
---|
| 1129 | END DO |
---|
| 1130 | |
---|
| 1131 | ELSE |
---|
| 1132 | WRITE(numout,*) 'CO2 impact on isoprene not considered' |
---|
| 1133 | fco2(:,:) = 1. |
---|
| 1134 | END IF |
---|
| 1135 | |
---|
| 1136 | |
---|
| 1137 | !! 3. Calculation of PFT dependant parameters and |
---|
| 1138 | ! Calculation of VOC emissions flux |
---|
| 1139 | |
---|
| 1140 | Eff_age_iso(:,:) = zero |
---|
| 1141 | Eff_age_meth(:,:) = zero |
---|
| 1142 | |
---|
| 1143 | |
---|
| 1144 | DO jv = 1, nvm ! loop over the PDFs |
---|
| 1145 | DO ji = 1, kjpindex ! loop over the grid cell |
---|
| 1146 | ! 6-Calculation of Leaf Age Function (Lathiere 2005) |
---|
| 1147 | IF ( ok_leafage ) THEN |
---|
| 1148 | DO jf = 1, nleafages |
---|
| 1149 | !> @codeinc |
---|
| 1150 | Eff_age_iso(ji,jv) = Eff_age_iso(ji,jv) + frac_age(ji,jv,jf)*iso_activity(jf) |
---|
| 1151 | Eff_age_meth(ji,jv) = Eff_age_meth(ji,jv) + frac_age(ji,jv,jf)*methanol_activity(jf) |
---|
| 1152 | !> @endcodeinc |
---|
| 1153 | END DO |
---|
| 1154 | !> @codeinc |
---|
| 1155 | Eff_age_VOC(ji,jv) = un |
---|
| 1156 | !> @endcodeinc |
---|
| 1157 | ELSE |
---|
| 1158 | Eff_age_iso(ji,jv) = un |
---|
| 1159 | Eff_age_meth(ji,jv) = un |
---|
| 1160 | Eff_age_VOC(ji,jv) = un |
---|
| 1161 | END IF |
---|
| 1162 | !! 5. Calculation of foliar density |
---|
| 1163 | IF ( sla(jv) .eq. zero ) THEN |
---|
| 1164 | fol_dens(ji,jv) = zero |
---|
| 1165 | ELSE |
---|
| 1166 | ! 2 factor for conversion from gC to gDM |
---|
| 1167 | fol_dens(ji,jv) = 2 * lai(ji,jv)/sla(jv) |
---|
| 1168 | ENDIF |
---|
| 1169 | !! 6. Calculation of VOC emissions from vegetation |
---|
| 1170 | IF ( ok_radcanopy ) THEN |
---|
| 1171 | ! if multi-layer canopy model |
---|
| 1172 | IF (ok_multilayer) THEN |
---|
| 1173 | |
---|
| 1174 | laisun(ji,jv) = zero |
---|
| 1175 | laish(ji,jv) = zero |
---|
| 1176 | GAMMA_iso_m = zero |
---|
| 1177 | flx_iso(ji,jv) = zero |
---|
| 1178 | flx_mono(ji,jv) = zero |
---|
| 1179 | flx_apinen(ji,jv) = zero |
---|
| 1180 | flx_bpinen(ji,jv) = zero |
---|
| 1181 | flx_limonen(ji,jv) = zero |
---|
| 1182 | flx_myrcen(ji,jv) = zero |
---|
| 1183 | flx_sabinen(ji,jv) = zero |
---|
| 1184 | flx_camphen(ji,jv) = zero |
---|
| 1185 | flx_3caren(ji,jv) = zero |
---|
| 1186 | flx_tbocimen(ji,jv) = zero |
---|
| 1187 | flx_othermono(ji,jv) = zero |
---|
| 1188 | flx_sesquiter(ji,jv) = zero |
---|
| 1189 | flx_methanol(ji,jv) = zero |
---|
| 1190 | flx_acetone(ji,jv) = zero |
---|
| 1191 | flx_acetal(ji,jv) = zero |
---|
| 1192 | flx_formal(ji,jv) = zero |
---|
| 1193 | flx_acetic(ji,jv) = zero |
---|
| 1194 | flx_formic(ji,jv) = zero |
---|
| 1195 | ! loop over the NLAI canopy layers |
---|
| 1196 | DO jl = 1, nlai |
---|
| 1197 | IF ((laitab(jl) .LE. lai(ji,jv)).AND.(lai(ji,jv).NE.zero)) THEN |
---|
| 1198 | !sunlit vegetation |
---|
| 1199 | Clsun_iso_tab = alpha_*CL1*PARsuntab(ji,jl)/sqrt(un + (alpha_**2) * (PARsuntab(ji,jl)**2) ) |
---|
| 1200 | ! shaded vegetation |
---|
| 1201 | Clsh_iso_tab = alpha_*CL1*PARshtab(ji,jl)/sqrt(un + (alpha_**2) * (PARshtab(ji,jl)**2) ) |
---|
| 1202 | flx_iso(ji,jv) = flx_iso(ji,jv) + (laisuntabdep(ji,jl)*Clsun_iso_tab+ & |
---|
| 1203 | & laishtabdep(ji,jl)*Clsh_iso_tab)* & |
---|
| 1204 | & fol_dens(ji,jv)/lai(ji,jv)*Ct_iso(ji)*em_factor_isoprene(jv)* & |
---|
| 1205 | & Eff_age_iso(ji,jv)*fco2(ji,jv)*1e-9/one_hour |
---|
| 1206 | |
---|
| 1207 | GAMMA_iso_m = GAMMA_iso_m + (laisuntabdep(ji,jl)*Clsun_iso_tab+ & |
---|
| 1208 | & laishtabdep(ji,jl)*Clsh_iso_tab)* & |
---|
| 1209 | & fol_dens(ji,jv)/lai(ji,jv)*Ct_iso(ji)*1e-9/one_hour |
---|
| 1210 | |
---|
| 1211 | laisun(ji,jv) = laisun(ji,jv) + laisuntabdep(ji,jl) |
---|
| 1212 | laish(ji,jv) = laish(ji,jv) + laishtabdep(ji,jl) |
---|
| 1213 | END IF |
---|
| 1214 | END DO |
---|
| 1215 | |
---|
| 1216 | !! 6.1 Calculation of monoterpene biogenic emissions |
---|
| 1217 | flx_mono(ji,jv) = ((1-LDF_mono)*Ct_mono(ji)*1e-9/one_hour*fol_dens(ji,jv) + LDF_mono*GAMMA_iso_m)* & |
---|
| 1218 | & em_factor_monoterpene(jv)*Eff_age_VOC(ji,jv) |
---|
| 1219 | !! 6.12 Calculation of sesquiterpenes biogenic emission |
---|
| 1220 | flx_sesquiter(ji,jv) = ((1-LDF_sesq)*Ct_sesq(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_sesq*GAMMA_iso_m)* & |
---|
| 1221 | & em_factor_sesquiterp(jv)*Eff_age_VOC(ji,jv) |
---|
| 1222 | !! 6.13 Calculation of methanol biogenic emissions |
---|
| 1223 | flx_methanol(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_meth*GAMMA_iso_m)* & |
---|
| 1224 | & em_factor_methanol(jv)*Eff_age_meth(ji,jv) |
---|
| 1225 | !! 6.14 Calculation of acetone biogenic emissions |
---|
| 1226 | flx_acetone(ji,jv) = ((1-LDF_acet)*Ct_acet(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_acet*GAMMA_iso_m)* & |
---|
| 1227 | & em_factor_acetone(jv)*Eff_age_VOC(ji,jv) |
---|
| 1228 | !! 6.14 Calculation of acetaldehyde biogenic emissions |
---|
| 1229 | flx_acetal(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_meth*GAMMA_iso_m)* & |
---|
| 1230 | & em_factor_acetal(jv)*Eff_age_VOC(ji,jv) |
---|
| 1231 | !! 6.16 Calculation of formaldehyde biogenic emissions |
---|
| 1232 | flx_formal(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_meth*GAMMA_iso_m)* & |
---|
| 1233 | & em_factor_formal(jv)*Eff_age_VOC(ji,jv) |
---|
| 1234 | !! 6.17 Calculation of acetic acid biogenic emissions |
---|
| 1235 | flx_acetic(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_meth*GAMMA_iso_m)* & |
---|
| 1236 | & em_factor_acetic(jv)*Eff_age_VOC(ji,jv) |
---|
| 1237 | !! 6.18 Calculation of formic acid biogenic emissions |
---|
| 1238 | flx_formic(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)*1e-9/one_hour*fol_dens(ji,jv) +LDF_meth*GAMMA_iso_m)* & |
---|
| 1239 | & em_factor_formic(jv)*Eff_age_VOC(ji,jv) |
---|
| 1240 | |
---|
| 1241 | |
---|
| 1242 | !! 6.3 Calculation of alfa pinene biogenic emission |
---|
| 1243 | flx_apinen(ji,jv) = em_factor_apinene(jv)*flx_mono(ji,jv) |
---|
| 1244 | !! 6.4 Calculation of beta pinene biogenic emission |
---|
| 1245 | flx_bpinen(ji,jv) = em_factor_bpinene(jv)*flx_mono(ji,jv) |
---|
| 1246 | !! 6.5 Calculation of limonene biogenic emission |
---|
| 1247 | flx_limonen(ji,jv) = em_factor_limonene(jv)*flx_mono(ji,jv) |
---|
| 1248 | !! 6.6 Calculation of myrcene biogenic emission !! |
---|
| 1249 | flx_myrcen(ji,jv) = em_factor_myrcene(jv)*flx_mono(ji,jv) |
---|
| 1250 | !! 6.7 Calculation of sabinene biogenic emission |
---|
| 1251 | flx_sabinen(ji,jv) = em_factor_sabinene(jv)*flx_mono(ji,jv) |
---|
| 1252 | !! 6.8 Calculation of camphene biogenic emission |
---|
| 1253 | flx_camphen(ji,jv) = em_factor_camphene(jv)*flx_mono(ji,jv) |
---|
| 1254 | !! 6.9 Calculation of 3-carene biogenic emission |
---|
| 1255 | flx_3caren(ji,jv) = em_factor_3carene(jv)*flx_mono(ji,jv) |
---|
| 1256 | !! 6.10 Calculation of t-beta-ocimene biogenic emission |
---|
| 1257 | flx_tbocimen(ji,jv) = em_factor_tbocimene(jv)*flx_mono(ji,jv) |
---|
| 1258 | !! 6.11 Calculation of other monoterpenes biogenic emission |
---|
| 1259 | flx_othermono(ji,jv) = em_factor_othermonot(jv)*flx_mono(ji,jv) |
---|
| 1260 | |
---|
| 1261 | ! if mono-layer canopy model |
---|
| 1262 | ELSE |
---|
| 1263 | !sunlit vegetation |
---|
| 1264 | Clsun_iso(ji,jv) = alpha_*CL1*PARsun(ji,jv)/sqrt(un + (alpha_**2) * (PARsun(ji,jv)**2) ) |
---|
| 1265 | ! shaded vegetation |
---|
| 1266 | Clsh_iso(ji,jv) = alpha_*CL1*PARsh(ji,jv)/sqrt(un + (alpha_**2) * (PARsh(ji,jv)**2) ) |
---|
| 1267 | IF (lai(ji,jv) .NE. zero) THEN |
---|
| 1268 | !! 6.1 Calculation of isoprene biogenic emissions |
---|
| 1269 | GAMMA_iso = (laisun(ji,jv)*Clsun_iso(ji,jv) + laish(ji,jv)*Clsh_iso(ji,jv))/lai(ji,jv)*Ct_iso(ji) |
---|
| 1270 | flx_iso(ji,jv) = GAMMA_iso*fol_dens(ji,jv)*em_factor_isoprene(jv)*Eff_age_iso(ji,jv)*fco2(ji,jv)*1e-9/one_hour |
---|
| 1271 | !! 6.2 Calculation of monoterpene biogenic emissions |
---|
| 1272 | flx_mono(ji,jv) = ((1-LDF_mono)*Ct_mono(ji)+LDF_mono*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1273 | & em_factor_monoterpene(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1274 | !! 6.3 Calculation of alfa pinene biogenic emission |
---|
| 1275 | flx_apinen(ji,jv) = em_factor_apinene(jv)*flx_mono(ji,jv) |
---|
| 1276 | !! 6.4 Calculation of beta pinene biogenic emission |
---|
| 1277 | flx_bpinen(ji,jv) = em_factor_bpinene(jv)*flx_mono(ji,jv) |
---|
| 1278 | !! 6.5 Calculation of limonene biogenic emission |
---|
| 1279 | flx_limonen(ji,jv) = em_factor_limonene(jv)*flx_mono(ji,jv) |
---|
| 1280 | !! 6.6 Calculation of myrcene biogenic emission |
---|
| 1281 | flx_myrcen(ji,jv) = em_factor_myrcene(jv)*flx_mono(ji,jv) |
---|
| 1282 | !! 6.7 Calculation of sabinene biogenic emission |
---|
| 1283 | flx_sabinen(ji,jv) = em_factor_sabinene(jv)*flx_mono(ji,jv) |
---|
| 1284 | !! 6.8 Calculation of camphene biogenic emission |
---|
| 1285 | flx_camphen(ji,jv) = em_factor_camphene(jv)*flx_mono(ji,jv) |
---|
| 1286 | !! 6.9 Calculation of 3-carene biogenic emission |
---|
| 1287 | flx_3caren(ji,jv) = em_factor_3carene(jv)*flx_mono(ji,jv) |
---|
| 1288 | !! 6.10 Calculation of t-beta-ocimene biogenic emission |
---|
| 1289 | flx_tbocimen(ji,jv) = em_factor_tbocimene(jv)*flx_mono(ji,jv) |
---|
| 1290 | !! 6.11 Calculation of other monoterpenes biogenic emission |
---|
| 1291 | flx_othermono(ji,jv) = em_factor_othermonot(jv)*flx_mono(ji,jv) |
---|
| 1292 | !! 6.12 Calculation of sesquiterpenes biogenic emission |
---|
| 1293 | flx_sesquiter(ji,jv) = ((1-LDF_sesq)*Ct_sesq(ji)+LDF_sesq*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1294 | & em_factor_sesquiterp(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1295 | !! 6.13 Calculation of methanol biogenic emissions |
---|
| 1296 | flx_methanol(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1297 | & em_factor_methanol(jv)*Eff_age_meth(ji,jv)*1e-9/one_hour |
---|
| 1298 | !! 6.14 Calculation of acetone biogenic emissions |
---|
| 1299 | flx_acetone(ji,jv) = ((1-LDF_acet)*Ct_acet(ji)+LDF_acet*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1300 | & em_factor_acetone(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1301 | !! 6.15 Calculation of acetaldehyde biogenic emissions |
---|
| 1302 | flx_acetal(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1303 | & em_factor_acetal(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1304 | !! 6.16 Calculation of formaldehyde biogenic emissions |
---|
| 1305 | flx_formal(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1306 | & em_factor_formal(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1307 | !! 6.17 Calculation of acetic acid biogenic emissions |
---|
| 1308 | flx_acetic(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1309 | & em_factor_acetic(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1310 | !! 6.18 Calculation of formic acid biogenic emissions |
---|
| 1311 | flx_formic(ji,jv) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*GAMMA_iso)*fol_dens(ji,jv)* & |
---|
| 1312 | & em_factor_formic(jv)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1313 | |
---|
| 1314 | ELSE |
---|
| 1315 | ! |
---|
| 1316 | flx_iso(ji,jv) = zero |
---|
| 1317 | flx_mono(ji,jv) = zero |
---|
| 1318 | flx_apinen(ji,jv) = zero |
---|
| 1319 | flx_bpinen(ji,jv) = zero |
---|
| 1320 | flx_limonen(ji,jv) = zero |
---|
| 1321 | flx_myrcen(ji,jv) = zero |
---|
| 1322 | flx_sabinen(ji,jv) = zero |
---|
| 1323 | flx_camphen(ji,jv) = zero |
---|
| 1324 | flx_3caren(ji,jv) = zero |
---|
| 1325 | flx_tbocimen(ji,jv) = zero |
---|
| 1326 | flx_othermono(ji,jv) = zero |
---|
| 1327 | flx_sesquiter(ji,jv) = zero |
---|
| 1328 | flx_methanol(ji,jv) = zero |
---|
| 1329 | flx_acetone(ji,jv) = zero |
---|
| 1330 | flx_acetal(ji,jv) = zero |
---|
| 1331 | flx_formal(ji,jv) = zero |
---|
| 1332 | flx_acetic(ji,jv) = zero |
---|
| 1333 | flx_formic(ji,jv) = zero |
---|
| 1334 | END IF |
---|
| 1335 | END IF |
---|
| 1336 | ! if no light extinction due to vegetation |
---|
| 1337 | ELSE |
---|
| 1338 | !! Isoprene emissions - general equation |
---|
| 1339 | flx_iso(ji,jv) = fol_dens(ji,jv)*Ct_iso(ji)*Cl_iso(ji)*Eff_age_iso(ji,jv)*fco2(ji,jv)* & |
---|
| 1340 | em_factor_isoprene(jv)*1e-9/one_hour |
---|
| 1341 | !! 6.2 Calculation of monoterpene biogenic emissions |
---|
| 1342 | Ylt_mono(ji) = ((1-LDF_mono)*Ct_mono(ji)+LDF_mono*Ct_iso(ji)*Cl_iso(ji)) |
---|
| 1343 | flx_mono(ji,jv) = fol_dens(ji,jv)*em_factor_monoterpene(jv)*Ylt_mono(ji)*Eff_age_VOC(ji,jv)*& |
---|
| 1344 | 1e-9/one_hour |
---|
| 1345 | !! 6.3 Calculation of alfa pinene biogenic emission |
---|
| 1346 | flx_apinen(ji,jv) = em_factor_apinene(jv)*flx_mono(ji,jv) |
---|
| 1347 | !! 6.4 Calculation of beta pinene biogenic emission |
---|
| 1348 | flx_bpinen(ji,jv) = em_factor_bpinene(jv)*flx_mono(ji,jv) |
---|
| 1349 | !! 6.5 Calculation of limonene biogenic emission |
---|
| 1350 | flx_limonen(ji,jv) = em_factor_limonene(jv)*flx_mono(ji,jv) |
---|
| 1351 | !! 6.6 Calculation of myrcene biogenic emission |
---|
| 1352 | flx_myrcen(ji,jv) = em_factor_myrcene(jv)*flx_mono(ji,jv) |
---|
| 1353 | !! 6.7 Calculation of sabinene biogenic emission |
---|
| 1354 | flx_sabinen(ji,jv) = em_factor_sabinene(jv)*flx_mono(ji,jv) |
---|
| 1355 | !! 6.8 Calculation of camphene biogenic emission |
---|
| 1356 | flx_camphen(ji,jv) = em_factor_camphene(jv)*flx_mono(ji,jv) |
---|
| 1357 | !! 6.9 Calculation of 3-carene biogenic emission |
---|
| 1358 | flx_3caren(ji,jv) = em_factor_3carene(jv)*flx_mono(ji,jv) |
---|
| 1359 | !! 6.10 Calculation of t-beta-ocimene biogenic emission |
---|
| 1360 | flx_tbocimen(ji,jv) = em_factor_tbocimene(jv)*flx_mono(ji,jv) |
---|
| 1361 | !! 6.11 Calculation of other monoterpenes biogenic emission |
---|
| 1362 | flx_othermono(ji,jv) = em_factor_othermonot(jv)*flx_mono(ji,jv) |
---|
| 1363 | !! 6.12 Calculation of sesquiterpenes biogenic emission |
---|
| 1364 | Ylt_sesq(ji) = ((1-LDF_sesq)*Ct_sesq(ji)+LDF_sesq*Ct_iso(ji)*Cl_iso(ji)) |
---|
| 1365 | flx_sesquiter(ji,jv) = fol_dens(ji,jv)*em_factor_sesquiterp(jv)*Ylt_sesq(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1366 | !! 6.16 Calculation of methanol biogenic emissions |
---|
| 1367 | Ylt_meth(ji) = ((1-LDF_meth)*Ct_meth(ji)+LDF_meth*Ct_iso(ji)*Cl_iso(ji)) |
---|
| 1368 | flx_methanol(ji,jv) = fol_dens(ji,jv)*em_factor_methanol(jv)*Ylt_meth(ji)*Eff_age_meth(ji,jv)*1e-9/one_hour |
---|
| 1369 | !! 6.17 Calculation of acetone biogenic emissions |
---|
| 1370 | Ylt_acet(ji) = ((1-LDF_acet)*Ct_acet(ji)+LDF_acet*Ct_iso(ji)*Cl_iso(ji)) |
---|
| 1371 | flx_acetone(ji,jv) = fol_dens(ji,jv)*em_factor_acetone(jv)*Ylt_acet(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1372 | !! 6.18 Calculation of acetaldehyde biogenic emissions |
---|
| 1373 | flx_acetal(ji,jv) = fol_dens(ji,jv)*em_factor_acetal(jv)*Ylt_meth(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1374 | !! 6.19 Calculation of formaldehyde biogenic emissions |
---|
| 1375 | flx_formal(ji,jv) = fol_dens(ji,jv)*em_factor_formal(jv)*Ylt_meth(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1376 | !! 6.20 Calculation of acetic acid biogenic emissions |
---|
| 1377 | flx_acetic(ji,jv) = fol_dens(ji,jv)*em_factor_acetic(jv)*Ylt_meth(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1378 | !! 6.21 Calculation of formic acid biogenic emissions |
---|
| 1379 | flx_formic(ji,jv) = fol_dens(ji,jv)*em_factor_formic(jv)*Ylt_meth(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1380 | |
---|
| 1381 | END IF |
---|
| 1382 | |
---|
| 1383 | !! 6.22 Calculation of ORVOC biogenic emissions |
---|
| 1384 | !! Other Reactive Volatile Organic Compounds |
---|
| 1385 | !> @codeinc |
---|
| 1386 | flx_ORVOC(ji,jv) = fol_dens(ji,jv)*em_factor_ORVOC(jv)*Ct_mono(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1387 | !> @endcodeinc |
---|
| 1388 | !! 6.4 Calculation of OVOC biogenic emissions |
---|
| 1389 | !! Other Volatile Organic Compounds |
---|
| 1390 | flx_OVOC(ji,jv) = fol_dens(ji,jv)*em_factor_OVOC(jv)*Ct_mono(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1391 | !! 6.5 Calculation of MBO biogenic emissions |
---|
| 1392 | !! 2-Methyl-3-Buten-2-ol |
---|
| 1393 | IF(lalo(ji,1) .GE. 20. .AND. lalo(ji,2) .LE. -100) THEN |
---|
| 1394 | flx_MBO(ji,jv) = fol_dens(ji,jv)*em_factor_MBO(jv)*Ct_MBO(ji)*Cl_MBO(ji)*Eff_age_VOC(ji,jv)*1e-9/one_hour |
---|
| 1395 | ELSE |
---|
| 1396 | flx_MBO(ji,jv) = zero |
---|
| 1397 | END IF |
---|
| 1398 | END DO |
---|
| 1399 | |
---|
| 1400 | END DO |
---|
| 1401 | |
---|
| 1402 | |
---|
| 1403 | !! 7. Calculation of NOx emissions from soils |
---|
| 1404 | ! Based on Yienger & Levy (1995) and Lathiere (2005, chapter 3) |
---|
| 1405 | DO ji = 1, kjpindex |
---|
| 1406 | !! 7.1 Precipitation-related pulse function |
---|
| 1407 | IF (ok_pulse_NOx) THEN |
---|
| 1408 | ! if we are during a period where pulses are not allowed |
---|
| 1409 | IF (ok_siesta(ji)) THEN |
---|
| 1410 | ! if this period is not over |
---|
| 1411 | IF (FLOOR(siestaday(ji)) .LE. siestalim(ji)) THEN |
---|
| 1412 | siestaday(ji) = siestaday(ji) + (dt_sechiba/one_day) |
---|
| 1413 | ! if this period is over |
---|
| 1414 | ELSE |
---|
| 1415 | ok_siesta(ji) = .FALSE. |
---|
| 1416 | siestaday(ji) = zero |
---|
| 1417 | END IF |
---|
| 1418 | END IF |
---|
| 1419 | ! if we are during a period where pulses are allowed |
---|
| 1420 | IF ((.NOT. ok_siesta(ji)) .AND. (.NOT. allow_pulse(ji))) THEN |
---|
| 1421 | IF (humrel(ji,1) .LT. 0.15) THEN |
---|
| 1422 | ! if precip exceeds 1 mm/day over one time step => a pulse occurs |
---|
| 1423 | IF(precip_rain(ji)/nbre_precip .GE. un/(one_day/dt_sechiba)) THEN |
---|
| 1424 | ! if precip is up to 5 mm/day => pulse length is 3 days |
---|
| 1425 | IF (precip_rain(ji)/nbre_precip .LT. 5./(one_day/dt_sechiba)) THEN |
---|
| 1426 | pulselim(ji) = 3. |
---|
| 1427 | ! if precip is up to 15 mm/day => pulse length is 7 days |
---|
| 1428 | ELSE IF (precip_rain(ji)/nbre_precip .LT. 15./(one_day/dt_sechiba)) THEN |
---|
| 1429 | pulselim(ji) = 7. |
---|
| 1430 | ! if precip is upper than 15 mm/day => pulse length is 14 days |
---|
| 1431 | ELSE IF (precip_rain(ji)/nbre_precip .GE. 15./(one_day/dt_sechiba)) THEN |
---|
| 1432 | pulselim(ji) = 14. |
---|
| 1433 | END IF |
---|
| 1434 | allow_pulse(ji)=.TRUE. |
---|
| 1435 | pulseday(ji) = un |
---|
| 1436 | END IF |
---|
| 1437 | END IF |
---|
| 1438 | END IF |
---|
| 1439 | ! if we were during a pulse period |
---|
| 1440 | IF (allow_pulse(ji)) THEN |
---|
| 1441 | ! if we are still during the pulse period |
---|
| 1442 | ! 16/06/2010 We assume a (pulselim-1) days for the pulse length (NVui+Jlath) |
---|
| 1443 | IF(FLOOR(pulseday(ji)) .LT. pulselim(ji)) THEN |
---|
| 1444 | ! calculation of the pulse function |
---|
| 1445 | IF (pulselim(ji).EQ.3) THEN |
---|
| 1446 | pulse(ji) = 11.19*exp(-0.805*pulseday(ji)) |
---|
| 1447 | ELSE IF (pulselim(ji).EQ.7) THEN |
---|
| 1448 | pulse(ji) = 14.68*exp(-0.384*pulseday(ji)) |
---|
| 1449 | ELSE IF (pulselim(ji).EQ.14) THEN |
---|
| 1450 | pulse(ji) = 18.46*exp(-0.208*pulseday(ji)) |
---|
| 1451 | END IF |
---|
| 1452 | pulseday(ji) = pulseday(ji) + (dt_sechiba/one_day) |
---|
| 1453 | ! if the pulse period is over |
---|
| 1454 | ELSE |
---|
| 1455 | ! pulse function is set to 1 |
---|
| 1456 | pulse(ji) = un |
---|
| 1457 | allow_pulse(ji) = .FALSE. |
---|
| 1458 | siestaday(ji) = un |
---|
| 1459 | siestalim(ji) = pulselim(ji) |
---|
| 1460 | ok_siesta(ji) = .TRUE. |
---|
| 1461 | END IF |
---|
| 1462 | END IF |
---|
| 1463 | ! no precipitation-related pulse function |
---|
| 1464 | ELSE |
---|
| 1465 | pulse(ji) = un |
---|
| 1466 | END IF |
---|
| 1467 | END DO |
---|
| 1468 | |
---|
| 1469 | !! 7.2 Calculation of NO basal emissions including pulse effect |
---|
| 1470 | DO jv = 1, nvm |
---|
| 1471 | DO ji = 1, kjpindex |
---|
| 1472 | !Tropical forests |
---|
| 1473 | IF ( is_tropical(jv) .AND. is_evergreen(jv) ) THEN |
---|
| 1474 | ! Wet soils |
---|
| 1475 | IF (humrel(ji,1) .GT. 0.3) THEN |
---|
| 1476 | flx_no_soil(ji,jv) = 2.6*pulse(ji) |
---|
| 1477 | ! Dry soils |
---|
| 1478 | ELSE |
---|
| 1479 | flx_no_soil(ji,jv) = 8.6*pulse(ji) |
---|
| 1480 | END IF |
---|
| 1481 | !Else If agricultural lands OR Wet soils |
---|
| 1482 | ELSE IF ( ( .NOT.(natural(jv)) ) .OR. ( humrel(ji,1) .GT. 0.3 ) ) THEN |
---|
| 1483 | ! Calculation of NO emissions depending of Temperature |
---|
| 1484 | IF (t_no(ji) .LT. zero) THEN |
---|
| 1485 | flx_no_soil(ji,jv) = zero |
---|
| 1486 | ELSE IF (t_no(ji) .LE. 10.) THEN |
---|
| 1487 | flx_no_soil(ji,jv) = 0.28*em_factor_no_wet(jv)*t_no(ji)*pulse(ji) |
---|
| 1488 | ELSE IF (t_no(ji) .LE. 30.) THEN |
---|
| 1489 | flx_no_soil(ji,jv) = em_factor_no_wet(jv)*exp(0.103*t_no(ji))*pulse(ji) |
---|
| 1490 | ELSE |
---|
| 1491 | flx_no_soil(ji,jv) = 21.97*em_factor_no_wet(jv)*pulse(ji) |
---|
| 1492 | END IF |
---|
| 1493 | !Else if Temp negative |
---|
| 1494 | ELSE IF (t_no(ji) .LT. zero) THEN |
---|
| 1495 | flx_no_soil(ji,jv) = zero |
---|
| 1496 | !Else if Temp <= 30 |
---|
| 1497 | ELSE IF (t_no(ji) .LE. 30.) THEN |
---|
| 1498 | flx_no_soil(ji,jv) = (em_factor_no_dry(jv)*t_no(ji))/30.*pulse(ji) |
---|
| 1499 | ELSE |
---|
| 1500 | flx_no_soil(ji,jv) = em_factor_no_dry(jv)*pulse(ji) |
---|
| 1501 | END IF |
---|
| 1502 | |
---|
| 1503 | !! 7.3 IF ACTIVATED (ok_bbgfertil_NOx = TRUE) calculation of NOx soil emission increase due to biomass burning |
---|
| 1504 | ! Calculation of Biomass-Burning-induced NOx emissions (Lathiere, 2005) |
---|
| 1505 | ! => NOx emissions 3-fold increase |
---|
| 1506 | IF (ok_bbgfertil_NOx) THEN |
---|
| 1507 | IF ( natural(jv) ) THEN |
---|
| 1508 | ! North Tropical zone from May to June |
---|
| 1509 | IF ((lalo(ji,1) .LE. 30. .AND. lalo(ji,1) .GE. zero).AND. & |
---|
| 1510 | (julian_diff .GE. 121. .AND. julian_diff .LE. 181).AND.(flx_co2_bbg_year(ji) .GT. 0.1)) THEN |
---|
| 1511 | flx_no_soil(ji,jv) = flx_no_soil(ji,jv)*3. |
---|
| 1512 | ! South Tropical zone from November to December |
---|
| 1513 | ELSE IF ((lalo(ji,1) .GE. -30. .AND. lalo(ji,1) .LT. zero).AND.(julian_diff .GE. 305.).AND. & |
---|
| 1514 | (flx_co2_bbg_year(ji) .GT. 0.1)) THEN |
---|
| 1515 | flx_no_soil(ji,jv) = flx_no_soil(ji,jv)*3. |
---|
| 1516 | END IF |
---|
| 1517 | END IF |
---|
| 1518 | END IF |
---|
| 1519 | |
---|
| 1520 | !! 7.4 IF ACTIVATED (ok_cropsfertil_NOx = TRUE) calculation of NOx soil emission increase due to fertilizer use |
---|
| 1521 | ! Calculation of N-fertiliser-induced NOx emissions |
---|
| 1522 | flx_fertil_no(ji,jv) = zero |
---|
| 1523 | IF (ok_cropsfertil_NOx) THEN |
---|
| 1524 | IF (veget_max_nowoody(ji) .NE. zero) THEN |
---|
| 1525 | ! Non-agricultural lands |
---|
| 1526 | IF ( (jv == ibare_sechiba) .OR. is_tree(jv) ) THEN |
---|
| 1527 | N_qt_WRICE_pft(ji,jv) = zero |
---|
| 1528 | N_qt_OTHER_pft(ji,jv) = zero |
---|
| 1529 | ! Grasslands or Croplands |
---|
| 1530 | ELSE |
---|
| 1531 | N_qt_WRICE_pft(ji,jv) = N_qt_WRICE_year(ji)*veget_max(ji,jv)/veget_max_nowoody(ji) |
---|
| 1532 | N_qt_OTHER_pft(ji,jv) = N_qt_OTHER_year(ji)*veget_max(ji,jv)/veget_max_nowoody(ji) |
---|
| 1533 | END IF |
---|
| 1534 | ELSE |
---|
| 1535 | N_qt_WRICE_pft(ji,jv) = zero |
---|
| 1536 | N_qt_OTHER_pft(ji,jv) = zero |
---|
| 1537 | END IF |
---|
| 1538 | |
---|
| 1539 | ! North temperate regions from May to August |
---|
| 1540 | ! OR South Temperate regions from November to February |
---|
| 1541 | IF (((lalo(ji,1) .GT. 30.) .AND. (julian_diff .GE. 121. .AND. julian_diff .LE. 243.).AND. & |
---|
| 1542 | (veget_max(ji,jv) .GT. min_sechiba)) .OR. & |
---|
| 1543 | ((lalo(ji,1) .LT. -30.) .AND. (julian_diff .GE. 305. .OR. julian_diff .LE. 59.) .AND.& |
---|
| 1544 | (veget_max(ji,jv) .GT. min_sechiba))) THEN |
---|
| 1545 | ! 1e12 for conversion from kg to Ng |
---|
| 1546 | ! 1/(365/12*24*60*60*4) for conversion from year to seconds corrected for 4 months of emissions |
---|
| 1547 | flx_fertil_no(ji,jv) = (N_qt_WRICE_pft(ji,jv)*(1/30.)+N_qt_OTHER_pft(ji,jv))*(2.5/100.) & |
---|
| 1548 | & *1e12/(365*24*60*60*4/12)/(area2(ji)*veget_max(ji,jv)) |
---|
| 1549 | ! OR Tropical regions all the year |
---|
| 1550 | ELSE IF ((lalo(ji,1) .GE. -30.).AND.(lalo(ji,1) .LE. 30.).AND.(veget_max(ji,jv) .GT. min_sechiba)) THEN |
---|
| 1551 | flx_fertil_no(ji,jv) = (N_qt_WRICE_pft(ji,jv)*(1/30.)+N_qt_OTHER_pft(ji,jv))*(2.5/100.) & |
---|
| 1552 | & *1e12/(365*24*60*60)/(area2(ji)*veget_max(ji,jv)) |
---|
| 1553 | END IF |
---|
| 1554 | flx_no_soil(ji,jv) = flx_no_soil(ji,jv) + flx_fertil_no(ji,jv) |
---|
| 1555 | END IF |
---|
| 1556 | |
---|
| 1557 | !! 7.5 Calculation of net NO flux above soil accounting for surface deposition, |
---|
| 1558 | !! based on the Canopy Reduction Factor (CRF), calculated using Leaf Area and Stomatal Area |
---|
| 1559 | !kc=cuticle absorptivity = 0.24m^2/m^2 |
---|
| 1560 | !ks=stomatal absorptivity = 8.75m^2/m^2 |
---|
| 1561 | !Larch=Larcher SAI/LAI ratio given in Larcher 1991 |
---|
| 1562 | !> @codeinc |
---|
| 1563 | CRF(ji,jv) = (exp(-8.75*Larch(jv)*lai(ji,jv)) + exp(-0.24*lai(ji,jv)))/2. |
---|
| 1564 | flx_no(ji,jv) = flx_no_soil(ji,jv)*CRF(ji,jv) |
---|
| 1565 | !> @endcodeinc |
---|
| 1566 | END DO |
---|
| 1567 | END DO |
---|
| 1568 | |
---|
| 1569 | |
---|
| 1570 | ! Write output with XIOS |
---|
| 1571 | CALL xios_orchidee_send_field("PAR",PAR) |
---|
| 1572 | CALL xios_orchidee_send_field("flx_fertil_no",flx_fertil_no) |
---|
| 1573 | CALL xios_orchidee_send_field("flx_iso",flx_iso) |
---|
| 1574 | CALL xios_orchidee_send_field("flx_mono",flx_mono) |
---|
| 1575 | CALL xios_orchidee_send_field("flx_ORVOC",flx_ORVOC) |
---|
| 1576 | CALL xios_orchidee_send_field("flx_MBO",flx_MBO) |
---|
| 1577 | CALL xios_orchidee_send_field("flx_methanol",flx_methanol) |
---|
| 1578 | CALL xios_orchidee_send_field("flx_acetone",flx_acetone) |
---|
| 1579 | CALL xios_orchidee_send_field("flx_acetal",flx_acetal) |
---|
| 1580 | CALL xios_orchidee_send_field("flx_formal",flx_formal) |
---|
| 1581 | CALL xios_orchidee_send_field("flx_acetic",flx_acetic) |
---|
| 1582 | CALL xios_orchidee_send_field("flx_formic",flx_formic) |
---|
| 1583 | CALL xios_orchidee_send_field("flx_no_soil",flx_no_soil) |
---|
| 1584 | CALL xios_orchidee_send_field("flx_no",flx_no) |
---|
| 1585 | CALL xios_orchidee_send_field('flx_apinen' , flx_apinen) |
---|
| 1586 | CALL xios_orchidee_send_field('flx_bpinen' , flx_bpinen) |
---|
| 1587 | CALL xios_orchidee_send_field('flx_limonen' ,flx_limonen) |
---|
| 1588 | CALL xios_orchidee_send_field('flx_myrcen' , flx_myrcen) |
---|
| 1589 | CALL xios_orchidee_send_field('flx_sabinen' ,flx_sabinen) |
---|
| 1590 | CALL xios_orchidee_send_field('flx_camphen' ,flx_camphen) |
---|
| 1591 | CALL xios_orchidee_send_field('flx_3caren' , flx_3caren) |
---|
| 1592 | CALL xios_orchidee_send_field('flx_tbocimen' ,flx_tbocimen) |
---|
| 1593 | CALL xios_orchidee_send_field('flx_othermono',flx_othermono) |
---|
| 1594 | CALL xios_orchidee_send_field('flx_sesquiter',flx_sesquiter) |
---|
| 1595 | CALL xios_orchidee_send_field("CRF",CRF) |
---|
| 1596 | CALL xios_orchidee_send_field('fco2', fco2) |
---|
| 1597 | |
---|
| 1598 | IF ( ok_radcanopy ) THEN |
---|
| 1599 | CALL xios_orchidee_send_field("PARdf",PARdf) |
---|
| 1600 | CALL xios_orchidee_send_field("PARdr",PARdr) |
---|
| 1601 | |
---|
| 1602 | IF (ok_multilayer) THEN |
---|
| 1603 | CALL xios_orchidee_send_field("PARsuntab",PARsuntab) |
---|
| 1604 | CALL xios_orchidee_send_field("PARshtab",PARshtab) |
---|
| 1605 | ELSE |
---|
| 1606 | CALL xios_orchidee_send_field("PARsun",PARsun) |
---|
| 1607 | CALL xios_orchidee_send_field("PARsh",PARsh) |
---|
| 1608 | CALL xios_orchidee_send_field("laisun",laisun) |
---|
| 1609 | CALL xios_orchidee_send_field("laish",laish) |
---|
| 1610 | ENDIF |
---|
| 1611 | ENDIF |
---|
| 1612 | |
---|
| 1613 | IF ( ok_bbgfertil_Nox ) THEN |
---|
| 1614 | CALL xios_orchidee_send_field("flx_co2_bbg_year",flx_co2_bbg_year) |
---|
| 1615 | END IF |
---|
| 1616 | |
---|
| 1617 | IF ( ok_cropsfertil_Nox ) THEN |
---|
| 1618 | CALL xios_orchidee_send_field("N_qt_WRICE_year",N_qt_WRICE_year) |
---|
| 1619 | CALL xios_orchidee_send_field("N_qt_OTHER_year",N_qt_OTHER_year) |
---|
| 1620 | END IF |
---|
| 1621 | |
---|
| 1622 | |
---|
| 1623 | ! Write output with IOIPSL |
---|
| 1624 | IF ( .NOT. almaoutput ) THEN |
---|
| 1625 | |
---|
| 1626 | CALL histwrite_p(hist_id, 'PAR', kjit, PAR, kjpindex, index) |
---|
| 1627 | IF ( ok_radcanopy ) THEN |
---|
| 1628 | CALL histwrite_p(hist_id, 'laisun', kjit, laisun, kjpindex*nvm, indexveg) |
---|
| 1629 | CALL histwrite_p(hist_id, 'laish', kjit, laish, kjpindex*nvm, indexveg) |
---|
| 1630 | CALL histwrite_p(hist_id, 'Fdf', kjit, Fdf, kjpindex, index) |
---|
| 1631 | IF (ok_multilayer) THEN |
---|
| 1632 | CALL histwrite_p(hist_id, 'PARsuntab', kjit, PARsuntab, kjpindex*(nlai+1), indexlai) |
---|
| 1633 | CALL histwrite_p(hist_id, 'PARshtab', kjit, PARshtab, kjpindex*(nlai+1), indexlai) |
---|
| 1634 | ELSE |
---|
| 1635 | CALL histwrite_p(hist_id, 'PARsun', kjit, PARsun, kjpindex*nvm, indexveg) |
---|
| 1636 | CALL histwrite_p(hist_id, 'PARsh', kjit, PARsh, kjpindex*nvm, indexveg) |
---|
| 1637 | END IF |
---|
| 1638 | CALL histwrite_p(hist_id, 'coszang', kjit, coszang, kjpindex, index) |
---|
| 1639 | CALL histwrite_p(hist_id, 'PARdf', kjit, PARdf, kjpindex, index) |
---|
| 1640 | CALL histwrite_p(hist_id, 'PARdr', kjit, PARdr, kjpindex, index) |
---|
| 1641 | CALL histwrite_p(hist_id, 'Trans', kjit, Trans, kjpindex, index) |
---|
| 1642 | END IF |
---|
| 1643 | CALL histwrite_p(hist_id, 'flx_fertil_no', kjit, flx_fertil_no, kjpindex*nvm, indexveg) |
---|
| 1644 | CALL histwrite_p(hist_id, 'CRF', kjit, CRF, kjpindex*nvm, indexveg) |
---|
| 1645 | CALL histwrite_p(hist_id, 'fco2', kjit, fco2, kjpindex*nvm, indexveg) |
---|
| 1646 | |
---|
| 1647 | IF ( ok_bbgfertil_Nox ) THEN |
---|
| 1648 | CALL histwrite_p(hist_id, 'flx_co2_bbg_year', 1, flx_co2_bbg_year, kjpindex, index) |
---|
| 1649 | ENDIF |
---|
| 1650 | IF ( ok_cropsfertil_Nox ) THEN |
---|
| 1651 | CALL histwrite_p(hist_id, 'N_qt_WRICE_year', 1, N_qt_WRICE_year, kjpindex, index) |
---|
| 1652 | CALL histwrite_p(hist_id, 'N_qt_OTHER_year', 1, N_qt_OTHER_year, kjpindex, index) |
---|
| 1653 | ENDIF |
---|
| 1654 | CALL histwrite_p(hist_id, 'flx_iso', kjit, flx_iso, kjpindex*nvm, indexveg) |
---|
| 1655 | CALL histwrite_p(hist_id, 'flx_mono', kjit, flx_mono, kjpindex*nvm, indexveg) |
---|
| 1656 | CALL histwrite_p(hist_id, 'flx_apinen', kjit, flx_apinen, kjpindex*nvm, indexveg) |
---|
| 1657 | CALL histwrite_p(hist_id, 'flx_bpinen', kjit, flx_bpinen, kjpindex*nvm, indexveg) |
---|
| 1658 | CALL histwrite_p(hist_id, 'flx_limonen', kjit, flx_limonen, kjpindex*nvm, indexveg) |
---|
| 1659 | CALL histwrite_p(hist_id, 'flx_myrcen', kjit, flx_myrcen, kjpindex*nvm, indexveg) |
---|
| 1660 | CALL histwrite_p(hist_id, 'flx_sabinen', kjit, flx_sabinen, kjpindex*nvm, indexveg) |
---|
| 1661 | CALL histwrite_p(hist_id, 'flx_camphen', kjit, flx_camphen, kjpindex*nvm, indexveg) |
---|
| 1662 | CALL histwrite_p(hist_id, 'flx_3caren', kjit, flx_3caren, kjpindex*nvm, indexveg) |
---|
| 1663 | CALL histwrite_p(hist_id, 'flx_tbocimen', kjit, flx_tbocimen, kjpindex*nvm, indexveg) |
---|
| 1664 | CALL histwrite_p(hist_id, 'flx_othermono', kjit, flx_othermono, kjpindex*nvm, indexveg) |
---|
| 1665 | CALL histwrite_p(hist_id, 'flx_sesquiter', kjit, flx_sesquiter, kjpindex*nvm, indexveg) |
---|
| 1666 | CALL histwrite_p(hist_id, 'flx_ORVOC', kjit, flx_ORVOC, kjpindex*nvm, indexveg) |
---|
| 1667 | CALL histwrite_p(hist_id, 'flx_MBO', kjit, flx_MBO, kjpindex*nvm, indexveg) |
---|
| 1668 | CALL histwrite_p(hist_id, 'flx_methanol', kjit, flx_methanol, kjpindex*nvm, indexveg) |
---|
| 1669 | CALL histwrite_p(hist_id, 'flx_acetone', kjit, flx_acetone, kjpindex*nvm, indexveg) |
---|
| 1670 | CALL histwrite_p(hist_id, 'flx_acetal', kjit, flx_acetal, kjpindex*nvm, indexveg) |
---|
| 1671 | CALL histwrite_p(hist_id, 'flx_formal', kjit, flx_formal, kjpindex*nvm, indexveg) |
---|
| 1672 | CALL histwrite_p(hist_id, 'flx_acetic', kjit, flx_acetic, kjpindex*nvm, indexveg) |
---|
| 1673 | CALL histwrite_p(hist_id, 'flx_formic', kjit, flx_formic, kjpindex*nvm, indexveg) |
---|
| 1674 | CALL histwrite_p(hist_id, 'flx_no_soil', kjit, flx_no_soil, kjpindex*nvm, indexveg) |
---|
| 1675 | CALL histwrite_p(hist_id, 'flx_no', kjit, flx_no, kjpindex*nvm, indexveg) |
---|
| 1676 | |
---|
| 1677 | IF ( hist2_id > 0 ) THEN |
---|
| 1678 | CALL histwrite_p(hist2_id, 'PAR', kjit, PAR, kjpindex, index) |
---|
| 1679 | IF ( ok_radcanopy ) THEN |
---|
| 1680 | CALL histwrite_p(hist2_id, 'PARsun', kjit, PARsun, kjpindex*nvm, indexveg) |
---|
| 1681 | CALL histwrite_p(hist2_id, 'PARsh', kjit, PARsh, kjpindex*nvm, indexveg) |
---|
| 1682 | CALL histwrite_p(hist2_id, 'laisun', kjit, laisun, kjpindex*nvm, indexveg) |
---|
| 1683 | CALL histwrite_p(hist2_id, 'laish', kjit, laish, kjpindex*nvm, indexveg) |
---|
| 1684 | ENDIF |
---|
| 1685 | CALL histwrite_p(hist2_id, 'flx_fertil_no', kjit, flx_fertil_no, kjpindex*nvm, indexveg) |
---|
| 1686 | CALL histwrite_p(hist2_id, 'CRF', kjit, CRF, kjpindex*nvm, indexveg) |
---|
| 1687 | IF ( ok_bbgfertil_Nox ) THEN |
---|
| 1688 | CALL histwrite_p(hist2_id, 'flx_co2_bbg_year', 1, flx_co2_bbg_year, kjpindex, index) |
---|
| 1689 | ENDIF |
---|
| 1690 | IF ( ok_cropsfertil_Nox ) THEN |
---|
| 1691 | CALL histwrite_p(hist2_id, 'N_qt_WRICE_year', 1, N_qt_WRICE_year, kjpindex, index) |
---|
| 1692 | CALL histwrite_p(hist2_id, 'N_qt_OTHER_year', 1, N_qt_OTHER_year, kjpindex, index) |
---|
| 1693 | ENDIF |
---|
| 1694 | CALL histwrite_p(hist2_id, 'flx_iso', kjit, flx_iso, kjpindex*nvm, indexveg) |
---|
| 1695 | CALL histwrite_p(hist2_id, 'flx_mono', kjit, flx_mono, kjpindex*nvm, indexveg) |
---|
| 1696 | CALL histwrite_p(hist2_id, 'flx_apinen', kjit, flx_apinen, kjpindex*nvm, indexveg) |
---|
| 1697 | CALL histwrite_p(hist2_id, 'flx_bpinen', kjit, flx_bpinen, kjpindex*nvm, indexveg) |
---|
| 1698 | CALL histwrite_p(hist2_id, 'flx_limonen', kjit, flx_limonen, kjpindex*nvm, indexveg) |
---|
| 1699 | CALL histwrite_p(hist2_id, 'flx_myrcen', kjit, flx_myrcen, kjpindex*nvm, indexveg) |
---|
| 1700 | CALL histwrite_p(hist2_id, 'flx_sabinen', kjit, flx_sabinen, kjpindex*nvm, indexveg) |
---|
| 1701 | CALL histwrite_p(hist2_id, 'flx_camphen', kjit, flx_camphen, kjpindex*nvm, indexveg) |
---|
| 1702 | CALL histwrite_p(hist2_id, 'flx_3caren', kjit, flx_3caren, kjpindex*nvm, indexveg) |
---|
| 1703 | CALL histwrite_p(hist2_id, 'flx_tbocimen', kjit, flx_tbocimen, kjpindex*nvm, indexveg) |
---|
| 1704 | CALL histwrite_p(hist2_id, 'flx_othermono', kjit, flx_othermono, kjpindex*nvm, indexveg) |
---|
| 1705 | CALL histwrite_p(hist2_id, 'flx_sesquiter', kjit, flx_sesquiter, kjpindex*nvm, indexveg) |
---|
| 1706 | CALL histwrite_p(hist2_id, 'flx_ORVOC', kjit, flx_ORVOC, kjpindex*nvm, indexveg) |
---|
| 1707 | CALL histwrite_p(hist2_id, 'flx_MBO', kjit, flx_MBO, kjpindex*nvm, indexveg) |
---|
| 1708 | CALL histwrite_p(hist2_id, 'flx_methanol', kjit, flx_methanol, kjpindex*nvm, indexveg) |
---|
| 1709 | CALL histwrite_p(hist2_id, 'flx_acetone', kjit, flx_acetone, kjpindex*nvm, indexveg) |
---|
| 1710 | CALL histwrite_p(hist2_id, 'flx_acetal', kjit, flx_acetal, kjpindex*nvm, indexveg) |
---|
| 1711 | CALL histwrite_p(hist2_id, 'flx_formal', kjit, flx_formal, kjpindex*nvm, indexveg) |
---|
| 1712 | CALL histwrite_p(hist2_id, 'flx_acetic', kjit, flx_acetic, kjpindex*nvm, indexveg) |
---|
| 1713 | CALL histwrite_p(hist2_id, 'flx_formic', kjit, flx_formic, kjpindex*nvm, indexveg) |
---|
| 1714 | CALL histwrite_p(hist2_id, 'flx_no_soil', kjit, flx_no_soil, kjpindex*nvm, indexveg) |
---|
| 1715 | CALL histwrite_p(hist2_id, 'flx_no', kjit, flx_no, kjpindex*nvm, indexveg) |
---|
| 1716 | ENDIF |
---|
| 1717 | ENDIF |
---|
| 1718 | |
---|
| 1719 | IF (printlev>=3) WRITE(numout,*) 'OK chemistry_bvoc' |
---|
| 1720 | |
---|
| 1721 | END SUBROUTINE chemistry_bvoc |
---|
| 1722 | |
---|
| 1723 | !! ================================================================================================================================ |
---|
| 1724 | !! SUBROUTINE : chemistry_flux_interface |
---|
| 1725 | !! |
---|
| 1726 | !>\BRIEF This subroutine will give to the interface between inca model and orchidee model in sechiba all the flux ask by inca |
---|
| 1727 | !! |
---|
| 1728 | !! DESCRIPTION : This subroutine allow the transfer of fluxes between surface and atmospheric chemistry. It is called from sechiba |
---|
| 1729 | !! |
---|
| 1730 | !! RECENT CHANGE(S): None |
---|
| 1731 | !! |
---|
| 1732 | !! MAIN OUTPUT VARIABLE(S): :: |
---|
| 1733 | !! |
---|
| 1734 | !! REFERENCE(S) : None |
---|
| 1735 | !! |
---|
| 1736 | !! FLOWCHART : None |
---|
| 1737 | !_ ================================================================================================================================ |
---|
| 1738 | |
---|
| 1739 | SUBROUTINE chemistry_flux_interface( field_out_names, fields_out, field_in_names, fields_in) |
---|
| 1740 | |
---|
| 1741 | ! |
---|
| 1742 | ! Optional arguments |
---|
| 1743 | ! |
---|
| 1744 | ! Names and fields for emission variables : to be transport by Orchidee to Inca |
---|
| 1745 | CHARACTER(LEN=*),DIMENSION(:), OPTIONAL, INTENT(IN) :: field_out_names |
---|
| 1746 | REAL(r_std),DIMENSION(:,:,:), OPTIONAL, INTENT(OUT) :: fields_out |
---|
| 1747 | ! |
---|
| 1748 | ! Names and fields for deposit variables : to be transport from chemistry model by INCA to ORCHIDEE. |
---|
| 1749 | CHARACTER(LEN=*),DIMENSION(:), OPTIONAL, INTENT(IN) :: field_in_names |
---|
| 1750 | REAL(r_std),DIMENSION(:,:), OPTIONAL, INTENT(IN) :: fields_in |
---|
| 1751 | ! |
---|
| 1752 | ! Number of fields to give (nb_fields_out) or get from (nb_fields_in) INCA : |
---|
| 1753 | INTEGER(i_std), SAVE :: nb_fields_out, nb_fields_in |
---|
| 1754 | !$OMP THREADPRIVATE(nb_fields_out, nb_fields_in) |
---|
| 1755 | |
---|
| 1756 | ! Id of fields to give (nb_fields_out) or get from (nb_fields_in) INCA : |
---|
| 1757 | INTEGER(i_std) :: i_fields_out, i_fields_in |
---|
| 1758 | |
---|
| 1759 | IF (l_first_chemistry_inca) THEN |
---|
| 1760 | |
---|
| 1761 | ! il faut verifier que ok_bvoc (chemistry_ok_bvoc) est bien active sinon on arrete tout |
---|
| 1762 | if (.not.ok_bvoc) then |
---|
| 1763 | CALL ipslerr_p (3,'chemistry_inca', & |
---|
| 1764 | & 'you need to activate chemistry_ok_bvoc in orchidee.def',& |
---|
| 1765 | & 'This model won''t be able to continue.', & |
---|
| 1766 | & '') |
---|
| 1767 | endif |
---|
| 1768 | |
---|
| 1769 | ! Prepare fieds out/in for interface with INCA. |
---|
| 1770 | IF (PRESENT(field_out_names)) THEN |
---|
| 1771 | nb_fields_out=SIZE(field_out_names) |
---|
| 1772 | ELSE |
---|
| 1773 | nb_fields_out=0 |
---|
| 1774 | ENDIF |
---|
| 1775 | |
---|
| 1776 | IF (PRESENT(field_in_names)) THEN |
---|
| 1777 | nb_fields_in=SIZE(field_in_names) |
---|
| 1778 | ELSE |
---|
| 1779 | nb_fields_in=0 |
---|
| 1780 | ENDIF |
---|
| 1781 | l_first_chemistry_inca = .FALSE. |
---|
| 1782 | |
---|
| 1783 | ENDIF |
---|
| 1784 | |
---|
| 1785 | |
---|
| 1786 | |
---|
| 1787 | IF (ok_bvoc) THEN |
---|
| 1788 | ! Fields for deposit variables : to be transport from chemistry model by INCA to ORCHIDEE. |
---|
| 1789 | DO i_fields_in=1,nb_fields_in |
---|
| 1790 | SELECT CASE(TRIM(field_in_names(i_fields_in))) |
---|
| 1791 | CASE DEFAULT |
---|
| 1792 | CALL ipslerr_p (3,'chemistry_inca', & |
---|
| 1793 | & 'You ask in INCA an unknown field '//TRIM(field_in_names(i_fields_in))//& |
---|
| 1794 | & ' to give to ORCHIDEE for this specific version.',& |
---|
| 1795 | & 'This model won''t be able to continue.', & |
---|
| 1796 | & '(check your tracer parameters in INCA)') |
---|
| 1797 | END SELECT |
---|
| 1798 | ENDDO |
---|
| 1799 | |
---|
| 1800 | ! Fields for Biogenic emissions : to be transport by Orchidee to Inca |
---|
| 1801 | DO i_fields_out=1,nb_fields_out |
---|
| 1802 | SELECT CASE(TRIM(field_out_names(i_fields_out))) |
---|
| 1803 | CASE("flx_iso") |
---|
| 1804 | fields_out(:,:,i_fields_out)=flx_iso(:,:) |
---|
| 1805 | CASE("flx_mono") |
---|
| 1806 | fields_out(:,:,i_fields_out)=flx_mono(:,:) |
---|
| 1807 | CASE("flx_ORVOC") |
---|
| 1808 | fields_out(:,:,i_fields_out)=flx_ORVOC(:,:) |
---|
| 1809 | CASE("flx_MBO") |
---|
| 1810 | fields_out(:,:,i_fields_out)=flx_MBO(:,:) |
---|
| 1811 | CASE("flx_methanol") |
---|
| 1812 | fields_out(:,:,i_fields_out)=flx_methanol(:,:) |
---|
| 1813 | CASE("flx_acetone") |
---|
| 1814 | fields_out(:,:,i_fields_out)=flx_acetone(:,:) |
---|
| 1815 | CASE("flx_acetal") |
---|
| 1816 | fields_out(:,:,i_fields_out)=flx_acetal(:,:) |
---|
| 1817 | CASE("flx_formal") |
---|
| 1818 | fields_out(:,:,i_fields_out)=flx_formal(:,:) |
---|
| 1819 | CASE("flx_acetic") |
---|
| 1820 | fields_out(:,:,i_fields_out)=flx_acetic(:,:) |
---|
| 1821 | CASE("flx_formic") |
---|
| 1822 | fields_out(:,:,i_fields_out)=flx_formic(:,:) |
---|
| 1823 | CASE("flx_no_soil") |
---|
| 1824 | fields_out(:,:,i_fields_out)=flx_no_soil(:,:) |
---|
| 1825 | CASE("flx_nox") |
---|
| 1826 | fields_out(:,:,i_fields_out)=flx_no(:,:) |
---|
| 1827 | CASE("flx_fertil_no") |
---|
| 1828 | fields_out(:,:,i_fields_out)=flx_fertil_no(:,:) |
---|
| 1829 | CASE("flx_apinen") |
---|
| 1830 | fields_out(:,:,i_fields_out)=flx_apinen(:,:) |
---|
| 1831 | CASE("flx_bpinen") |
---|
| 1832 | fields_out(:,:,i_fields_out)=flx_bpinen(:,:) |
---|
| 1833 | CASE("flx_limonen") |
---|
| 1834 | fields_out(:,:,i_fields_out)=flx_limonen(:,:) |
---|
| 1835 | CASE("flx_myrcen") |
---|
| 1836 | fields_out(:,:,i_fields_out)=flx_myrcen(:,:) |
---|
| 1837 | CASE("flx_sabinen") |
---|
| 1838 | fields_out(:,:,i_fields_out)=flx_sabinen(:,:) |
---|
| 1839 | CASE("flx_camphen") |
---|
| 1840 | fields_out(:,:,i_fields_out)=flx_camphen(:,:) |
---|
| 1841 | CASE("flx_3caren") |
---|
| 1842 | fields_out(:,:,i_fields_out)=flx_3caren(:,:) |
---|
| 1843 | CASE("flx_tbocimen") |
---|
| 1844 | fields_out(:,:,i_fields_out)=flx_tbocimen(:,:) |
---|
| 1845 | CASE("flx_othermono") |
---|
| 1846 | fields_out(:,:,i_fields_out)=flx_othermono(:,:) |
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| 1847 | CASE("flx_sesquiter") |
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| 1848 | fields_out(:,:,i_fields_out)=flx_sesquiter(:,:) |
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| 1849 | |
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| 1850 | CASE DEFAULT |
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| 1851 | CALL ipslerr_p (3,'chemistry_inca', & |
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| 1852 | & 'You ask from INCA an unknown field '//TRIM(field_out_names(i_fields_out))//& |
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| 1853 | & ' to ORCHIDEE for this specific version.',& |
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| 1854 | & 'This model won''t be able to continue.', & |
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| 1855 | & '(check your tracer parameters in INCA)') |
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| 1856 | END SELECT |
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| 1857 | ENDDO |
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| 1858 | |
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| 1859 | ENDIF |
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| 1860 | END SUBROUTINE chemistry_flux_interface |
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| 1861 | |
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| 1862 | !! ================================================================================================================================ |
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| 1863 | !! SUBROUTINE : chemistry_clear |
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| 1864 | !! |
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| 1865 | !>\BRIEF Clear chemistry module |
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| 1866 | !! |
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| 1867 | !! DESCRIPTION : Deallocate memory and reset initialization variables to there original values |
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| 1868 | !! |
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| 1869 | !_ ================================================================================================================================ |
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| 1870 | SUBROUTINE chemistry_clear |
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| 1871 | |
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| 1872 | !! 1. Initialize as for first run |
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| 1873 | l_first_chemistry_inca = .TRUE. |
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| 1874 | |
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| 1875 | !! 2. Deallocate dynamic variables |
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| 1876 | IF (ALLOCATED(pulse)) DEALLOCATE (pulse) |
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| 1877 | IF (ALLOCATED (ok_siesta)) DEALLOCATE (ok_siesta) |
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| 1878 | IF (ALLOCATED (allow_pulse)) DEALLOCATE (allow_pulse) |
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| 1879 | IF (ALLOCATED (pulseday)) DEALLOCATE (pulseday) |
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| 1880 | IF (ALLOCATED (siestaday)) DEALLOCATE (siestaday) |
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| 1881 | IF (ALLOCATED (pulselim)) DEALLOCATE (pulselim) |
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| 1882 | IF (ALLOCATED (siestalim)) DEALLOCATE (siestalim) |
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| 1883 | IF (ALLOCATED (area2)) DEALLOCATE (area2) |
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| 1884 | IF (ALLOCATED (N_qt_WRICE_year)) DEALLOCATE (N_qt_WRICE_year) |
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| 1885 | IF (ALLOCATED (N_qt_OTHER_year)) DEALLOCATE (N_qt_OTHER_year) |
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| 1886 | IF (ALLOCATED (flx_iso)) DEALLOCATE (flx_iso) |
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| 1887 | IF (ALLOCATED (flx_mono)) DEALLOCATE (flx_mono) |
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| 1888 | IF (ALLOCATED (flx_ORVOC)) DEALLOCATE (flx_ORVOC) |
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| 1889 | IF (ALLOCATED (flx_MBO)) DEALLOCATE (flx_MBO) |
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| 1890 | IF (ALLOCATED (flx_methanol)) DEALLOCATE (flx_methanol) |
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| 1891 | IF (ALLOCATED (flx_acetone)) DEALLOCATE (flx_acetone) |
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| 1892 | IF (ALLOCATED (flx_acetal)) DEALLOCATE (flx_acetal) |
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| 1893 | IF (ALLOCATED (flx_formal)) DEALLOCATE (flx_formal) |
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| 1894 | IF (ALLOCATED (flx_acetic)) DEALLOCATE (flx_acetic) |
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| 1895 | IF (ALLOCATED (flx_formic)) DEALLOCATE (flx_formic) |
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| 1896 | IF (ALLOCATED (flx_no_soil)) DEALLOCATE (flx_no_soil) |
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| 1897 | IF (ALLOCATED (flx_no)) DEALLOCATE (flx_no) |
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| 1898 | IF (ALLOCATED (flx_fertil_no)) DEALLOCATE (flx_fertil_no) |
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| 1899 | IF (ALLOCATED (flx_apinen)) DEALLOCATE (flx_apinen) |
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| 1900 | IF (ALLOCATED (flx_bpinen)) DEALLOCATE (flx_bpinen) |
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| 1901 | IF (ALLOCATED (flx_limonen)) DEALLOCATE (flx_limonen) |
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| 1902 | IF (ALLOCATED (flx_myrcen)) DEALLOCATE (flx_myrcen) |
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| 1903 | IF (ALLOCATED (flx_sabinen)) DEALLOCATE (flx_sabinen) |
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| 1904 | IF (ALLOCATED (flx_camphen)) DEALLOCATE (flx_camphen) |
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| 1905 | IF (ALLOCATED (flx_3caren)) DEALLOCATE (flx_3caren) |
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| 1906 | IF (ALLOCATED (flx_tbocimen)) DEALLOCATE (flx_tbocimen) |
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| 1907 | IF (ALLOCATED (flx_othermono)) DEALLOCATE (flx_othermono) |
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| 1908 | IF (ALLOCATED (flx_sesquiter)) DEALLOCATE (flx_sesquiter) |
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| 1909 | IF (ALLOCATED (CRF)) DEALLOCATE (CRF) |
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| 1910 | IF (ALLOCATED (flx_co2_bbg_year)) DEALLOCATE (flx_co2_bbg_year) |
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| 1911 | |
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| 1912 | END SUBROUTINE chemistry_clear |
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| 1913 | |
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| 1914 | END MODULE chemistry |
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