| 1 | ! ================================================================================================================================= |
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| 2 | ! MODULE : stomate |
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| 3 | ! |
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| 4 | ! CONTACT : orchidee-help _at_ listes.ipsl.fr |
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| 5 | ! |
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| 6 | ! LICENCE : IPSL (2006) |
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| 7 | ! This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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| 8 | ! |
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| 9 | !>\BRIEF Groups the subroutines that: (1) initialize all variables in |
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| 10 | !! stomate, (2) read and write forcing files of stomate and the soil component, |
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| 11 | !! (3) aggregates and convert variables to handle the different time steps |
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| 12 | !! between sechiba and stomate, (4) call subroutines that govern major stomate |
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| 13 | !! processes (litter, soil, and vegetation dynamics) and (5) structures these tasks |
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| 14 | !! in stomate_main |
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| 15 | !! |
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| 16 | !!\n DESCRIPTION : None |
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| 17 | !! |
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| 18 | !! RECENT CHANGE(S) : None |
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| 19 | !! |
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| 20 | !! REFERENCE(S) : None |
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| 21 | !! |
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| 22 | !! SVN : |
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| 23 | !! $HeadURL$ |
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| 24 | !! $Date$ |
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| 25 | !! $Revision$ |
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| 26 | !! \n |
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| 27 | !_ ================================================================================================================================ |
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| 28 | |
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| 29 | MODULE stomate |
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| 30 | |
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| 31 | ! Modules used: |
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| 32 | USE netcdf |
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| 33 | USE defprec |
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| 34 | USE grid |
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| 35 | USE time, ONLY : one_day, one_year, dt_sechiba, dt_stomate, LastTsYear, LastTsMonth |
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| 36 | USE time, ONLY : year_end, month_end, day_end, sec_end |
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| 37 | USE constantes |
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| 38 | USE constantes_soil |
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| 39 | USE pft_parameters |
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| 40 | USE stomate_io |
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| 41 | USE stomate_data |
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| 42 | USE stomate_season |
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| 43 | USE stomate_lpj |
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| 44 | USE stomate_litter |
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| 45 | USE stomate_vmax |
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| 46 | USE stomate_soilcarbon |
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| 47 | USE stomate_resp |
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| 48 | USE mod_orchidee_para |
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| 49 | USE ioipsl_para |
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| 50 | USE xios_orchidee |
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| 51 | |
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| 52 | USE matrix_resolution |
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| 53 | |
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| 54 | IMPLICIT NONE |
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| 55 | |
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| 56 | ! Private & public routines |
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| 57 | |
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| 58 | PRIVATE |
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| 59 | PUBLIC stomate_main,stomate_clear,init_forcing, stomate_forcing_read, stomate_initialize, stomate_finalize |
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| 60 | |
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| 61 | INTERFACE stomate_accu |
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| 62 | MODULE PROCEDURE stomate_accu_r1d, stomate_accu_r2d, stomate_accu_r3d |
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| 63 | END INTERFACE |
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| 64 | |
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| 65 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: biomass !! Biomass per ground area @tex $(gC m^{-2})$ @endtex |
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| 66 | !$OMP THREADPRIVATE(biomass) |
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| 67 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: veget_cov_max !! Maximal fractional coverage: maximum share of a pixel |
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| 68 | !! taken by a PFT |
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| 69 | !$OMP THREADPRIVATE(veget_cov_max) |
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| 70 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ind !! Vegetation density, number of individuals per unit |
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| 71 | !! ground area @tex $(m^{-2})$ @endtex |
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| 72 | !$OMP THREADPRIVATE(ind) |
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| 73 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: age !! Age of PFT it normalized by biomass - can increase and |
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| 74 | !! decrease - (years) |
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| 75 | !$OMP THREADPRIVATE(age) |
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| 76 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: adapted !! Winter too cold for PFT to survive (0-1, unitless) |
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| 77 | !$OMP THREADPRIVATE(adapted) |
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| 78 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: regenerate !! Winter sufficiently cold to produce viable seeds |
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| 79 | !! (0-1, unitless) |
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| 80 | !$OMP THREADPRIVATE(regenerate) |
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| 81 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: everywhere !! Is the PFT everywhere in the grid box or very localized |
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| 82 | !! (after its intoduction) |
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| 83 | !$OMP THREADPRIVATE(everywhere) |
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| 84 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fireindex !! Probability of fire (unitless) |
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| 85 | !$OMP THREADPRIVATE(fireindex) |
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| 86 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: veget_lastlight !! Vegetation fractions (on ground) after last light |
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| 87 | !! competition (unitless) |
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| 88 | !$OMP THREADPRIVATE(veget_lastlight) |
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| 89 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:) :: fpc_max !! "maximal" coverage fraction of a grid box (LAI -> |
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| 90 | !! infinity) on ground. [??CHECK??] It's set to zero here, |
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| 91 | !! and then is used once in lpj_light.f90 to test if |
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| 92 | !! fpc_nat is greater than it. Something seems missing |
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| 93 | !$OMP THREADPRIVATE(fpc_max) |
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| 94 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: PFTpresent !! PFT exists (equivalent to veget > 0 for natural PFTs) |
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| 95 | !$OMP THREADPRIVATE(PFTpresent) |
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| 96 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: senescence !! The PFT is senescent |
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| 97 | !$OMP THREADPRIVATE(senescence) |
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| 98 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: begin_leaves !! Signal to start putting leaves on (true/false) |
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| 99 | !$OMP THREADPRIVATE(begin_leaves) |
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| 100 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:,:) :: need_adjacent !! This PFT needs to be in present in an adjacent gridbox |
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| 101 | !! if it is to be introduced in a new gridbox |
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| 102 | !$OMP THREADPRIVATE(need_adjacent) |
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| 103 | !-- |
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| 104 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_daily !! Daily plant available water -root profile weighted |
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| 105 | !! (0-1, unitless) |
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| 106 | !$OMP THREADPRIVATE(humrel_daily) |
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| 107 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_week !! "Weekly" plant available water -root profile weighted |
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| 108 | !! (0-1, unitless) |
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| 109 | !$OMP THREADPRIVATE(humrel_week) |
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| 110 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: humrel_month !! "Monthly" plant available water -root profile weighted |
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| 111 | !! (0-1, unitless) |
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| 112 | !$OMP THREADPRIVATE(humrel_month) |
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| 113 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxhumrel_lastyear !! Last year's max plant available water -root profile |
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| 114 | !! weighted (0-1, unitless) |
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| 115 | !$OMP THREADPRIVATE(maxhumrel_lastyear) |
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| 116 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxhumrel_thisyear !! This year's max plant available water -root profile |
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| 117 | !! weighted (0-1, unitless) |
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| 118 | !$OMP THREADPRIVATE(maxhumrel_thisyear) |
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| 119 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minhumrel_lastyear !! Last year's min plant available water -root profile |
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| 120 | !! weighted (0-1, unitless) |
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| 121 | !$OMP THREADPRIVATE(minhumrel_lastyear) |
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| 122 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: minhumrel_thisyear !! This year's minimum plant available water -root profile |
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| 123 | !! weighted (0-1, unitless) |
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| 124 | !$OMP THREADPRIVATE(minhumrel_thisyear) |
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| 125 | !--- |
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| 126 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_daily !! Daily air temperature at 2 meter (K) |
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| 127 | !$OMP THREADPRIVATE(t2m_daily) |
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| 128 | |
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| 129 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason !! "seasonal" 2 meter temperatures (K) |
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| 130 | !$OMP THREADPRIVATE(Tseason) |
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| 131 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_length !! temporary variable to calculate Tseason |
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| 132 | !$OMP THREADPRIVATE(Tseason_length) |
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| 133 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: Tseason_tmp !! temporary variable to calculate Tseason |
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| 134 | !$OMP THREADPRIVATE(Tseason_tmp) |
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| 135 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: Tmin_spring_time !! Number of days after begin_leaves (leaf onset) |
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| 136 | !$OMP THREADPRIVATE(Tmin_spring_time) |
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| 137 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: onset_date !! Date in the year at when the leaves started to grow(begin_leaves), only for diagnostics. |
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| 138 | !$OMP THREADPRIVATE(onset_date) |
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| 139 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_week !! Mean "weekly" (default 7 days) air temperature at 2 |
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| 140 | !! meter (K) |
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| 141 | !$OMP THREADPRIVATE(t2m_week) |
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| 142 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_month !! Mean "monthly" (default 20 days) air temperature at 2 |
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| 143 | !! meter (K) |
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| 144 | !$OMP THREADPRIVATE(t2m_month) |
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| 145 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_longterm !! Mean "Long term" (default 3 years) air temperature at |
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| 146 | !! 2 meter (K) |
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| 147 | !$OMP THREADPRIVATE(t2m_longterm) |
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| 148 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: t2m_min_daily !! Daily minimum air temperature at 2 meter (K) |
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| 149 | !$OMP THREADPRIVATE(t2m_min_daily) |
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| 150 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: tsurf_daily !! Daily surface temperatures (K) |
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| 151 | !$OMP THREADPRIVATE(tsurf_daily) |
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| 152 | !--- |
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| 153 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_daily !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex |
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| 154 | !$OMP THREADPRIVATE(precip_daily) |
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| 155 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_lastyear !! Last year's annual precipitation sum |
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| 156 | !! @tex $??(mm year^{-1})$ @endtex |
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| 157 | !$OMP THREADPRIVATE(precip_lastyear) |
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| 158 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: precip_thisyear !! This year's annual precipitation sum |
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| 159 | !! @tex $??(mm year^{-1})$ @endtex |
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| 160 | !$OMP THREADPRIVATE(precip_thisyear) |
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| 161 | !--- |
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| 162 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: soilhum_daily !! Daily soil humidity (0-1, unitless) |
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| 163 | !$OMP THREADPRIVATE(soilhum_daily) |
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| 164 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: soilhum_month !! Soil humidity - integrated over a month (0-1, unitless) |
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| 165 | !$OMP THREADPRIVATE(soilhum_month) |
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| 166 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_daily !! Daily soil temperatures (K) |
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| 167 | !$OMP THREADPRIVATE(tsoil_daily) |
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| 168 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: tsoil_month !! Soil temperatures at each soil layer integrated over a |
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| 169 | !! month (K) |
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| 170 | !$OMP THREADPRIVATE(tsoil_month) |
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| 171 | !--- |
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| 172 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: litterhum_daily !! Daily litter humidity (0-1, unitless) |
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| 173 | !$OMP THREADPRIVATE(litterhum_daily) |
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| 174 | !--- |
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| 175 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_moist !! Moisture control of heterotrophic respiration |
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| 176 | !! (0-1, unitless) |
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| 177 | !$OMP THREADPRIVATE(control_moist) |
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| 178 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: control_temp !! Temperature control of heterotrophic respiration at the |
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| 179 | !! different soil levels (0-1, unitless) |
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| 180 | !$OMP THREADPRIVATE(control_temp) |
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| 181 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: control_moist_daily !! Moisture control of heterotrophic respiration daily |
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| 182 | !! (0-1, unitless) |
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| 183 | !$OMP THREADPRIVATE(control_moist_daily) |
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| 184 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: control_temp_daily !! Temperature control of heterotrophic respiration, above |
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| 185 | !! and below daily (0-1, unitless) |
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| 186 | !$OMP THREADPRIVATE(control_temp_daily) |
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| 187 | !--- |
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| 188 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_init_date !! inital date for gdd count |
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| 189 | !$OMP THREADPRIVATE(gdd_init_date) |
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| 190 | |
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| 191 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_from_growthinit !! gdd from beginning of season (C) |
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| 192 | !$OMP THREADPRIVATE(gdd_from_growthinit) |
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| 193 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_lastyear !! Last year's annual Growing Degree Days, |
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| 194 | !! threshold 0 deg C (K) |
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| 195 | !$OMP THREADPRIVATE(gdd0_lastyear) |
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| 196 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: gdd0_thisyear !! This year's annual Growing Degree Days, |
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| 197 | !! threshold 0 deg C (K) |
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| 198 | !$OMP THREADPRIVATE(gdd0_thisyear) |
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| 199 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_m5_dormance !! Growing degree days for onset of growing season, |
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| 200 | !! threshold -5 deg C (K) |
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| 201 | !$OMP THREADPRIVATE(gdd_m5_dormance) |
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| 202 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gdd_midwinter !! Growing degree days for onset of growing season, |
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| 203 | !! since midwinter (K) |
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| 204 | !$OMP THREADPRIVATE(gdd_midwinter) |
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| 205 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ncd_dormance !! Number of chilling days since leaves were lost (days) |
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| 206 | !$OMP THREADPRIVATE(ncd_dormance) |
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| 207 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: ngd_minus5 !! Number of growing days, threshold -5 deg C (days) |
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| 208 | !$OMP THREADPRIVATE(ngd_minus5) |
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| 209 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: hum_min_dormance !! Minimum moisture during dormance (0-1, unitless) |
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| 210 | !$OMP THREADPRIVATE(hum_min_dormance) |
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| 211 | !--- |
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| 212 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_daily !! Daily gross primary productivity per ground area |
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| 213 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 214 | !$OMP THREADPRIVATE(gpp_daily) |
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| 215 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: gpp_week !! Mean "weekly" (default 7 days) GPP |
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| 216 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 217 | !$OMP THREADPRIVATE(gpp_week) |
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| 218 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_lastyear !! Last year's maximum "weekly" GPP |
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| 219 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 220 | !$OMP THREADPRIVATE(maxgppweek_lastyear) |
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| 221 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxgppweek_thisyear !! This year's maximum "weekly" GPP |
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| 222 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 223 | !$OMP THREADPRIVATE(maxgppweek_thisyear) |
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| 224 | !--- |
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| 225 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_daily !! Daily net primary productivity per ground area |
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| 226 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 227 | !$OMP THREADPRIVATE(npp_daily) |
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| 228 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_longterm !! "Long term" (default 3 years) net primary productivity |
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| 229 | !! per ground area |
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| 230 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 231 | !$OMP THREADPRIVATE(npp_longterm) |
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| 232 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: npp_equil !! Equilibrium NPP written to forcesoil |
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| 233 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 234 | !$OMP THREADPRIVATE(npp_equil) |
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| 235 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: npp_tot !! Total NPP written to forcesoil |
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| 236 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 237 | !$OMP THREADPRIVATE(npp_tot) |
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| 238 | !--- |
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| 239 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part_radia!! Maintenance respiration of different plant parts per |
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| 240 | !! total ground area at Sechiba time step |
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| 241 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 242 | !$OMP THREADPRIVATE(resp_maint_part_radia) |
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| 243 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: resp_maint_part !! Maintenance respiration of different plant parts per |
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| 244 | !! total ground area at Stomate time step |
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| 245 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 246 | !$OMP THREADPRIVATE(resp_maint_part) |
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| 247 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_radia !! Maintenance respiration per ground area at Sechiba time |
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| 248 | !! step |
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| 249 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 250 | !$OMP THREADPRIVATE(resp_maint_radia) |
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| 251 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_maint_d !! Maintenance respiration per ground area at Stomate time |
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| 252 | !! step |
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| 253 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 254 | !$OMP THREADPRIVATE(resp_maint_d) |
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| 255 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_growth_d !! Growth respiration per ground area |
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| 256 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 257 | !$OMP THREADPRIVATE(resp_growth_d) |
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| 258 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_d !! Heterotrophic respiration per ground area |
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| 259 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 260 | !$OMP THREADPRIVATE(resp_hetero_d) |
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| 261 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: resp_hetero_radia !! Heterothrophic respiration per ground area at Sechiba |
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| 262 | !! time step |
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| 263 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 264 | !$OMP THREADPRIVATE(resp_hetero_radia) |
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| 265 | !--- |
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| 266 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: turnover_time !! Turnover time of grasses |
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| 267 | !! @tex $(dt_stomate^{-1})$ @endtex |
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| 268 | !$OMP THREADPRIVATE(turnover_time) |
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| 269 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_daily !! Senescence-driven turnover (better: mortality) of |
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| 270 | !! leaves and roots |
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| 271 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 272 | !$OMP THREADPRIVATE(turnover_daily) |
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| 273 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_littercalc !! Senescence-driven turnover (better: mortality) of |
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| 274 | !! leaves and roots at Sechiba time step |
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| 275 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 276 | !$OMP THREADPRIVATE(turnover_littercalc) |
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| 277 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: turnover_longterm !! "Long term" (default 3 years) senescence-driven |
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| 278 | !! turnover (better: mortality) of leaves and roots |
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| 279 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
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| 280 | !$OMP THREADPRIVATE(turnover_longterm) |
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| 281 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_litter !! Background (not senescence-driven) mortality of biomass |
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| 282 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
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| 283 | !$OMP THREADPRIVATE(bm_to_litter) |
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| 284 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:) :: bm_to_littercalc !! conversion of biomass to litter per ground area at |
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| 285 | !! Sechiba time step |
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| 286 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
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| 287 | !$OMP THREADPRIVATE(bm_to_littercalc) |
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| 288 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: dead_leaves !! Metabolic and structural pools of dead leaves on ground |
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| 289 | !! per PFT @tex $(gC m^{-2})$ @endtex |
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| 290 | !$OMP THREADPRIVATE(dead_leaves) |
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| 291 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:,:):: litter !! Above and below ground metabolic and structural litter |
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| 292 | !! per ground area |
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| 293 | !! @tex $(gC m^{-2})$ @endtex |
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| 294 | !$OMP THREADPRIVATE(litter) |
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| 295 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: litterpart !! Fraction of litter above the ground belonging to |
|---|
| 296 | !! different litter pools (unitless) |
|---|
| 297 | !$OMP THREADPRIVATE(litterpart) |
|---|
| 298 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: firelitter !! Total litter above the ground that could potentially |
|---|
| 299 | !! burn @tex $(gC m^{-2})$ @endtex |
|---|
| 300 | !$OMP THREADPRIVATE(firelitter) |
|---|
| 301 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:,:):: soilcarbon_input !! Quantity of carbon going into carbon pools from litter |
|---|
| 302 | !! decomposition per ground area at Sechiba time step |
|---|
| 303 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex |
|---|
| 304 | !$OMP THREADPRIVATE(soilcarbon_input) |
|---|
| 305 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: soilcarbon_input_daily !! Daily quantity of carbon going into carbon pools from |
|---|
| 306 | !! litter decomposition per ground area |
|---|
| 307 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 308 | !$OMP THREADPRIVATE(soilcarbon_input_daily) |
|---|
| 309 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: carbon !! Soil carbon pools per ground area: active, slow, or |
|---|
| 310 | !! passive, @tex $(gC m^{-2})$ @endtex |
|---|
| 311 | !$OMP THREADPRIVATE(carbon) |
|---|
| 312 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: lignin_struc !! Ratio Lignine/Carbon in structural litter for above and |
|---|
| 313 | !! below ground compartments (unitless) |
|---|
| 314 | !$OMP THREADPRIVATE(lignin_struc) |
|---|
| 315 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_lastyearmax !! Last year's maximum leaf mass per ground area for each |
|---|
| 316 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 317 | !$OMP THREADPRIVATE(lm_lastyearmax) |
|---|
| 318 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: lm_thisyearmax !! This year's maximum leaf mass per ground area for each |
|---|
| 319 | !! PFT @tex $(gC m^{-2})$ @endtex |
|---|
| 320 | !$OMP THREADPRIVATE(lm_thisyearmax) |
|---|
| 321 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_lastyear !! Last year's maximum fpc for each natural PFT, on ground |
|---|
| 322 | !! [??CHECK] fpc but this ones look ok (computed in |
|---|
| 323 | !! season, used in light)?? |
|---|
| 324 | !$OMP THREADPRIVATE(maxfpc_lastyear) |
|---|
| 325 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: maxfpc_thisyear !! This year's maximum fpc for each PFT, on ground (see |
|---|
| 326 | !! stomate_season), [??CHECK] fpc but this ones look ok |
|---|
| 327 | !! (computed in season, used in light)?? |
|---|
| 328 | !$OMP THREADPRIVATE(maxfpc_thisyear) |
|---|
| 329 | !--- |
|---|
| 330 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_age !! Age of different leaf classes (days) |
|---|
| 331 | !$OMP THREADPRIVATE(leaf_age) |
|---|
| 332 | REAL(r_std), ALLOCATABLE,SAVE,DIMENSION(:,:,:) :: leaf_frac !! PFT fraction of leaf mass in leaf age class (0-1, |
|---|
| 333 | !! unitless) |
|---|
| 334 | !$OMP THREADPRIVATE(leaf_frac) |
|---|
| 335 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: when_growthinit !! Days since beginning of growing season (days) |
|---|
| 336 | !$OMP THREADPRIVATE(when_growthinit) |
|---|
| 337 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: herbivores !! Time constant of probability of a leaf to be eaten by a |
|---|
| 338 | !! herbivore (days) |
|---|
| 339 | !$OMP THREADPRIVATE(herbivores) |
|---|
| 340 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: RIP_time !! How much time ago was the PFT eliminated for the last |
|---|
| 341 | !! time (year) |
|---|
| 342 | !$OMP THREADPRIVATE(RIP_time) |
|---|
| 343 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: time_hum_min !! Time elapsed since strongest moisture limitation (days) |
|---|
| 344 | !$OMP THREADPRIVATE(time_hum_min) |
|---|
| 345 | !--- |
|---|
| 346 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: clay_fm !! Soil clay content (0-1, unitless), parallel computing |
|---|
| 347 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: clay_fm_g !! Soil clay content (0-1, unitless), parallel computing |
|---|
| 348 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: precip_fm !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex, |
|---|
| 349 | !! parallel computing |
|---|
| 350 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: precip_fm_g !! Daily precipitations sum @tex $(mm day^{-1})$ @endtex, |
|---|
| 351 | !! parallel computing |
|---|
| 352 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: litterhum_daily_fm !! Daily relative humidity of litter (0-1, unitless), |
|---|
| 353 | !! parallel computing |
|---|
| 354 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: litterhum_daily_fm_g !! Daily relative humidity of litter (0-1, unitless), |
|---|
| 355 | !! parallel computing |
|---|
| 356 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_daily_fm !! Daily air temperature at 2 meter (K), parallel |
|---|
| 357 | !! computing |
|---|
| 358 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_daily_fm_g !! Daily air temperature at 2 meter (K), parallel |
|---|
| 359 | !! computing |
|---|
| 360 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_min_daily_fm !! Daily minimum air temperature at 2 meter (K), |
|---|
| 361 | !! parallel computing |
|---|
| 362 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: t2m_min_daily_fm_g !! Daily minimum air temperature at 2 meter (K), |
|---|
| 363 | !! parallel computing |
|---|
| 364 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: tsurf_daily_fm !! Daily surface temperatures (K), parallel |
|---|
| 365 | !! computing |
|---|
| 366 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: tsurf_daily_fm_g !! Daily surface temperatures (K), parallel |
|---|
| 367 | !! computing |
|---|
| 368 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: tsoil_daily_fm !! Daily soil temperatures (K), parallel computing |
|---|
| 369 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: tsoil_daily_fm_g !! Daily soil temperatures (K), parallel computing |
|---|
| 370 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: soilhum_daily_fm !! Daily soil humidity (0-1, unitless), parallel computing |
|---|
| 371 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: soilhum_daily_fm_g !! Daily soil humidity (0-1, unitless), parallel computing |
|---|
| 372 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: humrel_daily_fm !! Daily relative humidity of atmosphere (0-1, unitless), |
|---|
| 373 | !! parallel computing |
|---|
| 374 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: humrel_daily_fm_g !! Daily relative humidity of atmosphere (0-1, unitless), |
|---|
| 375 | !! parallel computing |
|---|
| 376 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: gpp_daily_fm !! Daily gross primary productivity per ground area |
|---|
| 377 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex, |
|---|
| 378 | !! parallel computing |
|---|
| 379 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: gpp_daily_fm_g !! Daily gross primary productivity per ground area |
|---|
| 380 | !! @tex $(gC m^{-2} day^{-1})$ @endtex, |
|---|
| 381 | !! parallel computing |
|---|
| 382 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_fm !! Vegetation coverage taking into account non-biological |
|---|
| 383 | !! coverage (unitless), parallel computing |
|---|
| 384 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_fm_g !! Vegetation coverage taking into account non-biological |
|---|
| 385 | !! coverage (unitless), parallel computing |
|---|
| 386 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_max_fm !! Maximum vegetation coverage taking into account |
|---|
| 387 | !! non-biological coverage (unitless), parallel computing |
|---|
| 388 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: veget_max_fm_g !! Maximum vegetation coverage taking into account none |
|---|
| 389 | !! biological coverage (unitless), parallel computing |
|---|
| 390 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: lai_fm !! Leaf area index @tex $@tex $(m^2 m^{-2})$ @endtex$ @endtex, |
|---|
| 391 | !! parallel computing |
|---|
| 392 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: lai_fm_g !! Leaf area index @tex $@tex $(m^2 m^{-2})$ @endtex$ @endtex, |
|---|
| 393 | !! parallel computing |
|---|
| 394 | !--- |
|---|
| 395 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_fire !! Carbon emitted to the atmosphere by burning living |
|---|
| 396 | !! and dead biomass |
|---|
| 397 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 398 | !$OMP THREADPRIVATE(co2_fire) |
|---|
| 399 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: co2_to_bm_dgvm !! Psuedo-photosynthesis,C used to provide seedlings with |
|---|
| 400 | !! an initial biomass, arbitrarily removed from the |
|---|
| 401 | !! atmosphere |
|---|
| 402 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 403 | !$OMP THREADPRIVATE(co2_to_bm_dgvm) |
|---|
| 404 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: nep_daily !! Daily net CO2 flux (positive from atmosphere to land) |
|---|
| 405 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 406 | !$OMP THREADPRIVATE(nep_daily) |
|---|
| 407 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: nep_monthly !! Monthly net CO2 flux (positive from atmosphere to land) |
|---|
| 408 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 409 | !$OMP THREADPRIVATE(nep_monthly) |
|---|
| 410 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: prod10 !! Wood products remaining in the 10 year-turnover pool |
|---|
| 411 | !! after the annual release for each compartment |
|---|
| 412 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 413 | !! (0:10 input from year of land cover change), |
|---|
| 414 | !! dimension(#pixels,0:10 years |
|---|
| 415 | !$OMP THREADPRIVATE(prod10) |
|---|
| 416 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: prod100 !! Wood products remaining in the 100 year-turnover pool |
|---|
| 417 | !! after the annual release for each compartment |
|---|
| 418 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 419 | !! (0:100 input from year of land cover change), |
|---|
| 420 | !! dimension(#pixels,0:100 years) |
|---|
| 421 | !$OMP THREADPRIVATE(prod100) |
|---|
| 422 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux10 !! Wood decomposition from the 10 year-turnover pool |
|---|
| 423 | !! compartments |
|---|
| 424 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 425 | !! dimension(#pixels,0:10) |
|---|
| 426 | !$OMP THREADPRIVATE(flux10) |
|---|
| 427 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux100 !! Wood decomposition from the 100 year-turnover pool |
|---|
| 428 | !! compartments |
|---|
| 429 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 430 | !! dimension(#pixels,0:100) |
|---|
| 431 | !$OMP THREADPRIVATE(flux100) |
|---|
| 432 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: convflux !! Release during first year following land cover change |
|---|
| 433 | !! (paper, burned, etc...) |
|---|
| 434 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 435 | !$OMP THREADPRIVATE(convflux) |
|---|
| 436 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: cflux_prod10 !! Total annual release from the 10 year-turnover pool |
|---|
| 437 | !! sum of flux10 |
|---|
| 438 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 439 | !$OMP THREADPRIVATE(cflux_prod10) |
|---|
| 440 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: cflux_prod100 !! Total annual release from the 100 year-turnover pool |
|---|
| 441 | !! sum of flux100 |
|---|
| 442 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 443 | !$OMP THREADPRIVATE(cflux_prod100) |
|---|
| 444 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: prod10_harvest !! Wood products remaining in the 10 year-turnover pool |
|---|
| 445 | !! after the annual release for each compartment |
|---|
| 446 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 447 | !! (0:10 input from year of wood harvest), |
|---|
| 448 | !! dimension(#pixels,0:10 years |
|---|
| 449 | !$OMP THREADPRIVATE(prod10_harvest) |
|---|
| 450 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: prod100_harvest !! Wood products remaining in the 100 year-turnover pool |
|---|
| 451 | !! after the annual release for each compartment |
|---|
| 452 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 453 | !! (0:100 input from year of wood harvest), |
|---|
| 454 | !! dimension(#pixels,0:100 years) |
|---|
| 455 | !$OMP THREADPRIVATE(prod100_harvest) |
|---|
| 456 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux10_harvest !! Wood decomposition from the 10 year-turnover pool |
|---|
| 457 | !! compartments |
|---|
| 458 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 459 | !! dimension(#pixels,0:10) |
|---|
| 460 | !$OMP THREADPRIVATE(flux10_harvest) |
|---|
| 461 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: flux100_harvest !! Wood decomposition from the 100 year-turnover pool |
|---|
| 462 | !! compartments |
|---|
| 463 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 464 | !! dimension(#pixels,0:100) |
|---|
| 465 | !$OMP THREADPRIVATE(flux100_harvest) |
|---|
| 466 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: convflux_harvest !! Release during first year following wood harvest |
|---|
| 467 | !! (paper, burned, etc...) |
|---|
| 468 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 469 | !$OMP THREADPRIVATE(convflux_harvest) |
|---|
| 470 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: cflux_prod10_harvest !! Total annual release from the 10 year-turnover pool |
|---|
| 471 | !! sum of flux10 |
|---|
| 472 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 473 | !$OMP THREADPRIVATE(cflux_prod10_harvest) |
|---|
| 474 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: cflux_prod100_harvest!! Total annual release from the 100 year-turnover pool |
|---|
| 475 | !! sum of flux100 |
|---|
| 476 | !! @tex $(gC m^{-2} year^{-1})$ @endtex |
|---|
| 477 | !$OMP THREADPRIVATE(cflux_prod100_harvest) |
|---|
| 478 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: convfluxpft !! Convflux per PFT |
|---|
| 479 | !$OMP THREADPRIVATE(convfluxpft) |
|---|
| 480 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fDeforestToProduct !! Deforested biomass into product pool due to anthropogenic |
|---|
| 481 | !! land use change |
|---|
| 482 | !$OMP THREADPRIVATE(fDeforestToProduct) |
|---|
| 483 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fLulccResidue !! Carbon mass flux into soil and litter due to anthropogenic land use or land cover change |
|---|
| 484 | !$OMP THREADPRIVATE(fLulccResidue) |
|---|
| 485 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: fHarvestToProduct !! Deforested biomass into product pool due to anthropogenic |
|---|
| 486 | !! land use |
|---|
| 487 | !$OMP THREADPRIVATE(fHarvestToProduct) |
|---|
| 488 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION (:,:):: woodharvestpft !! New year wood harvest per PFT |
|---|
| 489 | !$OMP THREADPRIVATE(woodharvestpft) |
|---|
| 490 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: harvest_above !! Harvest of above ground biomass for agriculture -not |
|---|
| 491 | !! just from land use change |
|---|
| 492 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 493 | !$OMP THREADPRIVATE(harvest_above) |
|---|
| 494 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: carb_mass_total !! Total on-site and off-site C pool |
|---|
| 495 | !! @tex $(??gC m^{-2})$ @endtex |
|---|
| 496 | !$OMP THREADPRIVATE(carb_mass_total) |
|---|
| 497 | !--- |
|---|
| 498 | REAL(r_std), SAVE :: tau_longterm |
|---|
| 499 | !$OMP THREADPRIVATE(tau_longterm) |
|---|
| 500 | REAL(r_std),SAVE :: dt_days=zero !! Time step of STOMATE (days) |
|---|
| 501 | !$OMP THREADPRIVATE(dt_days) |
|---|
| 502 | INTEGER(i_std),SAVE :: days_since_beg=0 !! Number of full days done since the start of the simulation |
|---|
| 503 | !$OMP THREADPRIVATE(days_since_beg) |
|---|
| 504 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: nforce !! Number of states calculated for the soil forcing |
|---|
| 505 | !! variables (unitless), dimension(::nparan*::nbyear) both |
|---|
| 506 | !! given in the run definition file |
|---|
| 507 | !$OMP THREADPRIVATE(nforce) |
|---|
| 508 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: isf !! Index for number of time steps that can be stored in |
|---|
| 509 | !! memory (unitless), dimension (#nsfm) |
|---|
| 510 | !$OMP THREADPRIVATE(isf) |
|---|
| 511 | INTEGER(i_std),ALLOCATABLE,SAVE,DIMENSION(:) :: nf_cumul !! Number of years over which the average is calculated in |
|---|
| 512 | !! forcesoil when cumul flag is set, dimension (#nsft) |
|---|
| 513 | !! [??CHECK] definition the dimension is number of |
|---|
| 514 | !! timesteps in a year? |
|---|
| 515 | !$OMP THREADPRIVATE(nf_cumul) |
|---|
| 516 | INTEGER(i_std), SAVE :: spinup_period !! Period of years used to calculate the resolution of the system for spinup analytic. |
|---|
| 517 | !! This period correspond in most cases to the period of years of forcing data used |
|---|
| 518 | INTEGER,PARAMETER :: r_typ = nf90_real4 !! Specify data format (server dependent) |
|---|
| 519 | LOGICAL,ALLOCATABLE,SAVE,DIMENSION(:) :: nf_written !! Flag indicating whether the forcing data have been |
|---|
| 520 | !! written |
|---|
| 521 | !$OMP THREADPRIVATE(nf_written) |
|---|
| 522 | !--- |
|---|
| 523 | LOGICAL, SAVE :: do_slow=.FALSE. !! Flag that determines whether stomate_accu calculates |
|---|
| 524 | !! the sum(do_slow=.FALSE.) or the mean |
|---|
| 525 | !! (do_slow=.TRUE.) |
|---|
| 526 | !$OMP THREADPRIVATE(do_slow) |
|---|
| 527 | LOGICAL, SAVE :: l_first_stomate = .TRUE.!! Is this the first call of stomate? |
|---|
| 528 | !$OMP THREADPRIVATE(l_first_stomate) |
|---|
| 529 | LOGICAL, SAVE :: cumul_forcing=.FALSE.!! flag for cumul of forcing if teststomate |
|---|
| 530 | !$OMP THREADPRIVATE(cumul_forcing) |
|---|
| 531 | LOGICAL, SAVE :: cumul_Cforcing=.FALSE. !! Flag, if internal parameter cumul_Cforcing is |
|---|
| 532 | !! TRUE then ::nbyear (defined in run definition |
|---|
| 533 | !! file will be forced to 1 later in this module. If |
|---|
| 534 | !! FALSE the mean over ::nbyear is written in forcesoil |
|---|
| 535 | !$OMP THREADPRIVATE(cumul_Cforcing) |
|---|
| 536 | !--- |
|---|
| 537 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: harvest_above_monthly !! [??CHECK] post-processing - should be removed? |
|---|
| 538 | !$OMP THREADPRIVATE(harvest_above_monthly) |
|---|
| 539 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:) :: cflux_prod_monthly !! [??CHECK] post-processing - should be removed? |
|---|
| 540 | !$OMP THREADPRIVATE(cflux_prod_monthly) |
|---|
| 541 | !--- |
|---|
| 542 | INTEGER(i_std), SAVE :: global_years !! Global counter of years (year) |
|---|
| 543 | !$OMP THREADPRIVATE(global_years) |
|---|
| 544 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: ok_equilibrium !! Logical array marking the points where the resolution is ok |
|---|
| 545 | !! (true/false) |
|---|
| 546 | !$OMP THREADPRIVATE(ok_equilibrium) |
|---|
| 547 | LOGICAL, ALLOCATABLE, SAVE, DIMENSION(:) :: carbon_eq !! Logical array to mark the carbon pools at equilibrium ? |
|---|
| 548 | !! If true, the job stops. (true/false) |
|---|
| 549 | !$OMP THREADPRIVATE(carbon_eq) |
|---|
| 550 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: nbp_accu !! Accumulated Net Biospheric Production over the year (gC.m^2 ) |
|---|
| 551 | !$OMP THREADPRIVATE(nbp_accu) |
|---|
| 552 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:) :: nbp_flux !! Net Biospheric Production (gC.m^2.day^{-1}) |
|---|
| 553 | !$OMP THREADPRIVATE(nbp_flux) |
|---|
| 554 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:,:) :: matrixA !! Matrix containing the fluxes between the carbon pools |
|---|
| 555 | !! per sechiba time step |
|---|
| 556 | !! @tex $(gC.m^2.day^{-1})$ @endtex |
|---|
| 557 | !$OMP THREADPRIVATE(matrixA) |
|---|
| 558 | REAL(r_std), ALLOCATABLE, DIMENSION(:,:,:) :: vectorB !! Vector containing the litter increase per sechiba time step |
|---|
| 559 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 560 | !$OMP THREADPRIVATE(vectorB) |
|---|
| 561 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: MatrixV !! Matrix containing the accumulated values of matrixA |
|---|
| 562 | !$OMP THREADPRIVATE(MatrixV) |
|---|
| 563 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: VectorU !! Matrix containing the accumulated values of VectorB |
|---|
| 564 | !$OMP THREADPRIVATE(VectorU) |
|---|
| 565 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:,:) :: MatrixW !! Matrix containing the opposite of matrixA |
|---|
| 566 | !$OMP THREADPRIVATE(MatrixW) |
|---|
| 567 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: previous_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 568 | !! method in the previous resolution |
|---|
| 569 | !$OMP THREADPRIVATE(previous_stock) |
|---|
| 570 | REAL(r_std), ALLOCATABLE, SAVE, DIMENSION(:,:,:) :: current_stock !! Array containing the carbon stock calculated by the analytical |
|---|
| 571 | !! method in the current resolution |
|---|
| 572 | !$OMP THREADPRIVATE(current_stock) |
|---|
| 573 | REAL(r_std), SAVE :: eps_carbon !! Stopping criterion for carbon pools (unitless,0-1) |
|---|
| 574 | !$OMP THREADPRIVATE(eps_carbon) |
|---|
| 575 | REAL(r_std),SAVE :: dt_forcesoil !! Time step of soil forcing file (days) |
|---|
| 576 | !$OMP THREADPRIVATE(dt_forcesoil) |
|---|
| 577 | INTEGER(i_std),PARAMETER :: nparanmax=366 !! Maximum number of time steps per year for forcesoil |
|---|
| 578 | INTEGER(i_std),SAVE :: nparan !! Number of time steps per year for forcesoil read from run definition (unitless) |
|---|
| 579 | !$OMP THREADPRIVATE(nparan) |
|---|
| 580 | INTEGER(i_std),SAVE :: nbyear=1 !! Number of years saved for forcesoil (unitless) |
|---|
| 581 | !$OMP THREADPRIVATE(nbyear) |
|---|
| 582 | INTEGER(i_std),SAVE :: iatt !! Time step of forcing of soil processes (iatt = 1 to ::nparan*::nbyear) |
|---|
| 583 | !$OMP THREADPRIVATE(iatt) |
|---|
| 584 | INTEGER(i_std),SAVE :: iatt_old=1 !! Previous ::iatt |
|---|
| 585 | !$OMP THREADPRIVATE(iatt_old) |
|---|
| 586 | INTEGER(i_std),SAVE :: nsfm !! Number of time steps that can be stored in memory (unitless) |
|---|
| 587 | !$OMP THREADPRIVATE(nsfm) |
|---|
| 588 | INTEGER(i_std),SAVE :: nsft !! Number of time steps in a year (unitless) |
|---|
| 589 | !$OMP THREADPRIVATE(nsft) |
|---|
| 590 | INTEGER(i_std),SAVE :: iisf !! Current pointer for teststomate (unitless) |
|---|
| 591 | !$OMP THREADPRIVATE(iisf) |
|---|
| 592 | CHARACTER(LEN=100), SAVE :: forcing_name !! Name of forcing file 1 |
|---|
| 593 | !$OMP THREADPRIVATE(forcing_name) |
|---|
| 594 | CHARACTER(LEN=100), SAVE :: Cforcing_name !! Name of forcing file 2 |
|---|
| 595 | !$OMP THREADPRIVATE(Cforcing_name) |
|---|
| 596 | INTEGER(i_std),SAVE :: Cforcing_id !! File identifer of file 2 |
|---|
| 597 | !$OMP THREADPRIVATE(Cforcing_id) |
|---|
| 598 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions (unitless) |
|---|
| 599 | |
|---|
| 600 | |
|---|
| 601 | PUBLIC clay_fm, humrel_daily_fm, litterhum_daily_fm, t2m_daily_fm, & |
|---|
| 602 | & t2m_min_daily_fm, tsurf_daily_fm, tsoil_daily_fm, soilhum_daily_fm, & |
|---|
| 603 | & precip_fm, gpp_daily_fm, veget_fm, veget_max_fm, lai_fm |
|---|
| 604 | PUBLIC dt_days, days_since_beg, do_slow |
|---|
| 605 | PUBLIC isf, nf_written |
|---|
| 606 | |
|---|
| 607 | CONTAINS |
|---|
| 608 | |
|---|
| 609 | |
|---|
| 610 | !! ================================================================================================================================ |
|---|
| 611 | !! SUBROUTINE : stomate_initialize |
|---|
| 612 | !! |
|---|
| 613 | !>\BRIEF Initialization routine for stomate module. |
|---|
| 614 | !! |
|---|
| 615 | !! DESCRIPTION : Initialization routine for stomate module. Read options from parameter file, allocate variables, read variables |
|---|
| 616 | !! from restart file and initialize variables if necessary. |
|---|
| 617 | !! |
|---|
| 618 | !! \n |
|---|
| 619 | !_ ================================================================================================================================ |
|---|
| 620 | |
|---|
| 621 | SUBROUTINE stomate_initialize & |
|---|
| 622 | (kjit, kjpij, kjpindex, & |
|---|
| 623 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 624 | index, lalo, neighbours, resolution, & |
|---|
| 625 | contfrac, totfrac_nobio, clay, temp_air, &!IGEMt2m |
|---|
| 626 | lai, veget, veget_max, & |
|---|
| 627 | co2_flux, co2_to_bm_radia, fco2_lu, deadleaf_cover, assim_param, temp_growth ) |
|---|
| 628 | |
|---|
| 629 | IMPLICIT NONE |
|---|
| 630 | !! 0. Variable and parameter declaration |
|---|
| 631 | !! 0.1 Input variables |
|---|
| 632 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 633 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 634 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 635 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 636 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 637 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier(unitless) |
|---|
| 638 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! The indices of the terrestrial pixels only (unitless) |
|---|
| 639 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) for pixels (degrees) |
|---|
| 640 | INTEGER(i_std),DIMENSION(kjpindex,NbNeighb),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM (unitless) |
|---|
| 641 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of the gridbox |
|---|
| 642 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 643 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio !! Fraction of grid cell covered by lakes, land ice, cities, ... (unitless) |
|---|
| 644 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 645 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: temp_air !! Air temperature at first atmospheric model layer (K) !IGEM |
|---|
| 646 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: lai !! Leaf area inex @tex $(m^2 m^{-2})$ @endtex |
|---|
| 647 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 648 | !! non-biological fraction (unitless) |
|---|
| 649 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 650 | !! non-biological fraction (unitless) |
|---|
| 651 | |
|---|
| 652 | !! 0.2 Output variables |
|---|
| 653 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_flux !! CO2 flux between atmosphere and biosphere |
|---|
| 654 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_to_bm_radia !! virtual gpp flux between atmosphere and biosphere |
|---|
| 655 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: fco2_lu !! CO2 flux between atmosphere and biosphere from land-use (without forest management) |
|---|
| 656 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: deadleaf_cover !! Fraction of soil covered by dead leaves (unitless) |
|---|
| 657 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(out) :: assim_param !! min+max+opt temperatures (K) & vmax for photosynthesis |
|---|
| 658 | !! @tex $(\mu mol m^{-2}s^{-1})$ @endtex |
|---|
| 659 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: temp_growth !! Growth temperature (ðC) |
|---|
| 660 | !! Is equal to t2m_month |
|---|
| 661 | !! 0.3 Local variables |
|---|
| 662 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 663 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 664 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 665 | REAL(r_std),DIMENSION(kjpindex,nvm) :: rprof !! Coefficient of the exponential functions that |
|---|
| 666 | !! relates root density to soil depth (unitless) |
|---|
| 667 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 668 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 669 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 670 | !! covered by a PFT (fraction of ground area), |
|---|
| 671 | !! taking into account LAI ??(= grid scale fpc)?? |
|---|
| 672 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 673 | |
|---|
| 674 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 675 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 676 | !! time step on one processor (Mb) |
|---|
| 677 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 678 | !! time step on all processors(Mb) |
|---|
| 679 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 680 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 681 | INTEGER(i_std) :: direct !! |
|---|
| 682 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! |
|---|
| 683 | |
|---|
| 684 | |
|---|
| 685 | !_ ================================================================================================================================ |
|---|
| 686 | |
|---|
| 687 | !! 1. Initialize variable |
|---|
| 688 | !! Update flag |
|---|
| 689 | l_first_stomate = .FALSE. |
|---|
| 690 | |
|---|
| 691 | !! 1.1 Store current time step in a common variable |
|---|
| 692 | itime = kjit |
|---|
| 693 | |
|---|
| 694 | |
|---|
| 695 | !! 1.3 PFT rooting depth across pixels, humescte is pre-defined |
|---|
| 696 | ! (constantes_veg.f90). It is defined as the coefficient of an exponential |
|---|
| 697 | ! function relating root density to depth |
|---|
| 698 | DO j=1,nvm |
|---|
| 699 | rprof(:,j) = 1./humcste(j) |
|---|
| 700 | ENDDO |
|---|
| 701 | |
|---|
| 702 | !! 1.4.0 Parameters for spinup |
|---|
| 703 | ! |
|---|
| 704 | eps_carbon = 0.01 |
|---|
| 705 | !Config Key = EPS_CARBON |
|---|
| 706 | !Config Desc = Allowed error on carbon stock |
|---|
| 707 | !Config If = SPINUP_ANALYTIC |
|---|
| 708 | !Config Def = 0.01 |
|---|
| 709 | !Config Help = |
|---|
| 710 | !Config Units = [%] |
|---|
| 711 | CALL getin_p('EPS_CARBON',eps_carbon) |
|---|
| 712 | |
|---|
| 713 | |
|---|
| 714 | !Config Key = SPINUP_PERIOD |
|---|
| 715 | !Config Desc = Period to calulcate equilibrium during spinup analytic |
|---|
| 716 | !Config If = SPINUP_ANALYTIC |
|---|
| 717 | !Config Def = -1 |
|---|
| 718 | !Config Help = Period corresponds in most cases to the number of years of forcing data used in the spinup. |
|---|
| 719 | !Config Units = [years] |
|---|
| 720 | spinup_period = -1 |
|---|
| 721 | CALL getin_p('SPINUP_PERIOD',spinup_period) |
|---|
| 722 | |
|---|
| 723 | ! Check spinup_period values. |
|---|
| 724 | ! For periods uptil 6 years, to obtain equilibrium, a bigger period have to be used |
|---|
| 725 | ! and therefore spinup_period is adjusted to 10 years. |
|---|
| 726 | IF (spinup_analytic) THEN |
|---|
| 727 | IF (spinup_period <= 0) THEN |
|---|
| 728 | WRITE(numout,*) 'Error in parameter spinup_period. This parameter must be > 0 : spinup_period=',spinup_period |
|---|
| 729 | CALL ipslerr_p (3,'stomate_initialize', & |
|---|
| 730 | 'Parameter spinup_period must be set to a positive integer.', & |
|---|
| 731 | 'Set this parameter to the number of years of forcing data used for the spinup.', & |
|---|
| 732 | '') |
|---|
| 733 | ELSE IF (spinup_period <= 6) THEN |
|---|
| 734 | ! Adjust to bigger period. The period must be a multiple of the original period. |
|---|
| 735 | WRITE(numout,*) 'Initial spinup_period =',spinup_period,' will be adjusted.' |
|---|
| 736 | spinup_period = spinup_period*(INT(9/spinup_period)+1) |
|---|
| 737 | END IF |
|---|
| 738 | IF (printlev >=1) WRITE(numout,*) 'Spinup analytic is activated using eps_carbon=',& |
|---|
| 739 | eps_carbon, ' and spinup_period=',spinup_period |
|---|
| 740 | END IF |
|---|
| 741 | |
|---|
| 742 | |
|---|
| 743 | !! 1.4.1 Allocate memory for all variables in stomate |
|---|
| 744 | ! Allocate memory for all variables in stomate, build new index |
|---|
| 745 | ! tables accounting for the PFTs, read and check flags and set file |
|---|
| 746 | ! identifier for restart and history files. |
|---|
| 747 | CALL stomate_init (kjpij, kjpindex, index, lalo, & |
|---|
| 748 | rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 749 | |
|---|
| 750 | !! 1.4.2 Initialization of PFT specific parameters |
|---|
| 751 | ! Initialization of PFT specific parameters i.e. sla from leaf life, |
|---|
| 752 | ! sapling characteristics (biomass), migration speed, critical diameter, |
|---|
| 753 | ! coldest tolerable temperature, critical values for phenology, maximum |
|---|
| 754 | ! life time of leaves, respiration coefficients and photosynthesis. |
|---|
| 755 | ! The subroutine also communicates settings read by stomate_constant_init. |
|---|
| 756 | CALL data (kjpindex, lalo) |
|---|
| 757 | |
|---|
| 758 | !! 1.4.3 Initial conditions |
|---|
| 759 | |
|---|
| 760 | !! 1.4.3.1 Read initial values for STOMATE's variables from the _restart_ file |
|---|
| 761 | ! ??Shouldn't this be included in stomate_init?? Looks like an initialization! |
|---|
| 762 | co2_flux(:,:) = zero |
|---|
| 763 | fco2_lu(:) = zero |
|---|
| 764 | |
|---|
| 765 | ! Get values from _restart_ file. Note that only ::kjpindex, ::index, ::lalo |
|---|
| 766 | ! and ::resolution are input variables, all others are output variables. |
|---|
| 767 | CALL readstart & |
|---|
| 768 | (kjpindex, index, lalo, resolution, temp_air, &!IGEMt2m |
|---|
| 769 | dt_days_read, days_since_beg, & |
|---|
| 770 | ind, adapted, regenerate, & |
|---|
| 771 | humrel_daily, gdd_init_date, litterhum_daily, & |
|---|
| 772 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 773 | soilhum_daily, precip_daily, & |
|---|
| 774 | gpp_daily, npp_daily, turnover_daily, & |
|---|
| 775 | humrel_month, humrel_week, & |
|---|
| 776 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 777 | tsoil_month, soilhum_month, fireindex, firelitter, & |
|---|
| 778 | maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 779 | minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 780 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 781 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 782 | precip_lastyear, precip_thisyear, & |
|---|
| 783 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 784 | PFTpresent, npp_longterm, lm_lastyearmax, lm_thisyearmax, & |
|---|
| 785 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 786 | turnover_longterm, gpp_week, biomass, resp_maint_part, & |
|---|
| 787 | leaf_age, leaf_frac, & |
|---|
| 788 | senescence, when_growthinit, age, & |
|---|
| 789 | resp_hetero_d, resp_maint_d, resp_growth_d, co2_fire, co2_to_bm_dgvm, co2_to_bm_radia, & |
|---|
| 790 | veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 791 | time_hum_min, hum_min_dormance, & |
|---|
| 792 | litterpart, litter, dead_leaves, & |
|---|
| 793 | carbon, lignin_struc,turnover_time,& |
|---|
| 794 | prod10,prod100,flux10, flux100, & |
|---|
| 795 | convflux, cflux_prod10, cflux_prod100, & |
|---|
| 796 | prod10_harvest,prod100_harvest,flux10_harvest, flux100_harvest, & |
|---|
| 797 | convflux_harvest, cflux_prod10_harvest, cflux_prod100_harvest, & |
|---|
| 798 | convfluxpft, fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 799 | woodharvestpft, bm_to_litter, carb_mass_total, & |
|---|
| 800 | Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 801 | Tmin_spring_time, begin_leaves, onset_date, & |
|---|
| 802 | global_years, ok_equilibrium, nbp_accu, nbp_flux, & |
|---|
| 803 | MatrixV, VectorU, previous_stock, current_stock, assim_param) |
|---|
| 804 | |
|---|
| 805 | !! 1.4.5 Check time step |
|---|
| 806 | |
|---|
| 807 | !! 1.4.5.1 Allow STOMATE's time step to change although this is dangerous |
|---|
| 808 | IF (dt_days /= dt_days_read) THEN |
|---|
| 809 | WRITE(numout,*) 'slow_processes: STOMATE time step changes:', & |
|---|
| 810 | & dt_days_read,' -> ',dt_days |
|---|
| 811 | ENDIF |
|---|
| 812 | |
|---|
| 813 | !! 1.4.5.2 Time step has to be a multiple of a full day |
|---|
| 814 | IF ( ( dt_days-REAL(NINT(dt_days),r_std) ) > min_stomate ) THEN |
|---|
| 815 | WRITE(numout,*) 'slow_processes: STOMATE time step is not a mutiple of a full day:', & |
|---|
| 816 | & dt_days,' days.' |
|---|
| 817 | STOP |
|---|
| 818 | ENDIF |
|---|
| 819 | |
|---|
| 820 | !! 1.4.5.3 upper limit to STOMATE's time step |
|---|
| 821 | IF ( dt_days > max_dt_days ) THEN |
|---|
| 822 | WRITE(numout,*) 'slow_processes: STOMATE time step exceeds the maximum value:', & |
|---|
| 823 | & dt_days,' days > ', max_dt_days, ' days.' |
|---|
| 824 | STOP |
|---|
| 825 | ENDIF |
|---|
| 826 | |
|---|
| 827 | !! 1.4.5.4 STOMATE time step must not be less than the forcing time step |
|---|
| 828 | IF ( dt_sechiba > dt_days*one_day ) THEN |
|---|
| 829 | WRITE(numout,*) & |
|---|
| 830 | & 'slow_processes: STOMATE time step ::dt_days smaller than forcing time step ::dt_sechiba' |
|---|
| 831 | STOP |
|---|
| 832 | ENDIF |
|---|
| 833 | |
|---|
| 834 | !! 1.4.5.6 Final message on time step |
|---|
| 835 | IF (printlev >=2) WRITE(numout,*) 'Slow_processes, STOMATE time step (days): ', dt_days |
|---|
| 836 | |
|---|
| 837 | !! 1.4.6 Write forcing file for teststomate |
|---|
| 838 | IF (ok_co2 .AND. allow_forcing_write) THEN |
|---|
| 839 | |
|---|
| 840 | !Config Key = STOMATE_FORCING_NAME |
|---|
| 841 | !Config Desc = Name of STOMATE's forcing file |
|---|
| 842 | !Config If = OK_STOMATE |
|---|
| 843 | !Config Def = NONE |
|---|
| 844 | !Config Help = Name that will be given |
|---|
| 845 | !Config to STOMATE's offline forcing file |
|---|
| 846 | !Config Compatible with Nicolas Viovy's driver |
|---|
| 847 | !Config Units = [FILE] |
|---|
| 848 | forcing_name = stomate_forcing_name |
|---|
| 849 | CALL getin_p('STOMATE_FORCING_NAME',forcing_name) |
|---|
| 850 | |
|---|
| 851 | IF ( TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 852 | |
|---|
| 853 | !! 1.4.6.1 Calculate steps that can be stored in memory |
|---|
| 854 | ! Action for the root processor only (parallel computing) |
|---|
| 855 | IF (is_root_prc) CALL SYSTEM ('rm -f '//TRIM(forcing_name)) |
|---|
| 856 | IF (printlev>=2) WRITE(numout,*) 'writing a forcing file for STOMATE.' |
|---|
| 857 | |
|---|
| 858 | !Config Key = STOMATE_FORCING_MEMSIZE |
|---|
| 859 | !Config Desc = Size of STOMATE forcing data in memory |
|---|
| 860 | !Config If = OK_STOMATE |
|---|
| 861 | !Config Def = 50 |
|---|
| 862 | !Config Help = This variable determines how many |
|---|
| 863 | !Config forcing states will be kept in memory. |
|---|
| 864 | !Config Must be a compromise between memory |
|---|
| 865 | !Config use and frequeny of disk access. |
|---|
| 866 | !Config Units = [MegaBytes] |
|---|
| 867 | max_totsize = 50 |
|---|
| 868 | CALL getin_p('STOMATE_FORCING_MEMSIZE', max_totsize) |
|---|
| 869 | max_totsize = max_totsize*1000000 |
|---|
| 870 | |
|---|
| 871 | totsize_1step = & |
|---|
| 872 | SIZE(clay)*KIND(clay) & |
|---|
| 873 | +SIZE(humrel_daily)*KIND(humrel_daily) & |
|---|
| 874 | +SIZE(litterhum_daily)*KIND(litterhum_daily) & |
|---|
| 875 | +SIZE(t2m_daily)*KIND(t2m_daily) & |
|---|
| 876 | +SIZE(t2m_min_daily)*KIND(t2m_min_daily) & |
|---|
| 877 | +SIZE(tsurf_daily)*KIND(tsurf_daily) & |
|---|
| 878 | +SIZE(tsoil_daily)*KIND(tsoil_daily) & |
|---|
| 879 | +SIZE(soilhum_daily)*KIND(soilhum_daily) & |
|---|
| 880 | +SIZE(precip_daily)*KIND(precip_daily) & |
|---|
| 881 | +SIZE(gpp_daily_x)*KIND(gpp_daily_x) & |
|---|
| 882 | +SIZE(veget)*KIND(veget) & |
|---|
| 883 | +SIZE(veget_max)*KIND(veget_max) & |
|---|
| 884 | +SIZE(lai)*KIND(lai) |
|---|
| 885 | |
|---|
| 886 | ! Totsize_1step is the size on a single processor, sum |
|---|
| 887 | ! all processors and send to all processors |
|---|
| 888 | CALL reduce_sum(totsize_1step,totsize_tmp) |
|---|
| 889 | CALL bcast(totsize_tmp) |
|---|
| 890 | totsize_1step=totsize_tmp |
|---|
| 891 | |
|---|
| 892 | ! Total number of forcing steps |
|---|
| 893 | nsft = INT(one_year/(dt_stomate/one_day)) |
|---|
| 894 | |
|---|
| 895 | ! Number of forcing steps in memory |
|---|
| 896 | nsfm = MIN(nsft, & |
|---|
| 897 | MAX(1,NINT( REAL(max_totsize,r_std) & |
|---|
| 898 | /REAL(totsize_1step,r_std)))) |
|---|
| 899 | |
|---|
| 900 | |
|---|
| 901 | !! 1.6.4.2 Allocate memory for variables containing forcing data |
|---|
| 902 | ! and initialize variables (set to zero). |
|---|
| 903 | CALL init_forcing (kjpindex,nsfm,nsft) |
|---|
| 904 | |
|---|
| 905 | ! Indexing for writing forcing file |
|---|
| 906 | isf(:) = (/ (i,i=1,nsfm) /) |
|---|
| 907 | nf_written(:) = .FALSE. |
|---|
| 908 | nf_cumul(:) = 0 |
|---|
| 909 | iisf = 0 |
|---|
| 910 | |
|---|
| 911 | !! 1.6.4.3 Create netcdf file |
|---|
| 912 | ! Create, define and populate a netcdf file containing the forcing data. |
|---|
| 913 | ! For the root processor only (parallel computing). NF90_ are functions |
|---|
| 914 | ! from and external library. |
|---|
| 915 | IF (is_root_prc) THEN |
|---|
| 916 | |
|---|
| 917 | ! Create new netCDF dataset |
|---|
| 918 | ier = NF90_CREATE (TRIM(forcing_name),NF90_SHARE,forcing_id) |
|---|
| 919 | |
|---|
| 920 | ! Add variable attribute |
|---|
| 921 | ! Note ::iim_g and ::jjm_g are dimensions of the global field and |
|---|
| 922 | ! ::nbp_glo is the number of global continental points |
|---|
| 923 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL,'dt_sechiba',dt_sechiba) |
|---|
| 924 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL,'dt_stomate',dt_stomate) |
|---|
| 925 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 926 | 'nsft',REAL(nsft,r_std)) |
|---|
| 927 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 928 | 'kjpij',REAL(iim_g*jjm_g,r_std)) |
|---|
| 929 | ier = NF90_PUT_ATT (forcing_id,NF90_GLOBAL, & |
|---|
| 930 | 'kjpindex',REAL(nbp_glo,r_std)) |
|---|
| 931 | |
|---|
| 932 | ! Add new dimension |
|---|
| 933 | ier = NF90_DEF_DIM (forcing_id,'points',nbp_glo,d_id(1)) |
|---|
| 934 | ier = NF90_DEF_DIM (forcing_id,'layers',nslm,d_id(2)) |
|---|
| 935 | ier = NF90_DEF_DIM (forcing_id,'pft',nvm,d_id(3)) |
|---|
| 936 | direct=2 |
|---|
| 937 | ier = NF90_DEF_DIM (forcing_id,'direction',direct,d_id(4)) |
|---|
| 938 | nneigh=8 |
|---|
| 939 | ier = NF90_DEF_DIM (forcing_id,'nneigh',nneigh,d_id(5)) |
|---|
| 940 | ier = NF90_DEF_DIM (forcing_id,'time',NF90_UNLIMITED,d_id(6)) |
|---|
| 941 | ier = NF90_DEF_DIM (forcing_id,'nbparts',nparts,d_id(7)) |
|---|
| 942 | |
|---|
| 943 | ! Add new variable |
|---|
| 944 | ier = NF90_DEF_VAR (forcing_id,'points', r_typ,d_id(1),vid) |
|---|
| 945 | ier = NF90_DEF_VAR (forcing_id,'layers', r_typ,d_id(2),vid) |
|---|
| 946 | ier = NF90_DEF_VAR (forcing_id,'pft', r_typ,d_id(3),vid) |
|---|
| 947 | ier = NF90_DEF_VAR (forcing_id,'direction', r_typ,d_id(4),vid) |
|---|
| 948 | ier = NF90_DEF_VAR (forcing_id,'nneigh', r_typ,d_id(5),vid) |
|---|
| 949 | ier = NF90_DEF_VAR (forcing_id,'time', r_typ,d_id(6),vid) |
|---|
| 950 | ier = NF90_DEF_VAR (forcing_id,'nbparts', r_typ,d_id(7),vid) |
|---|
| 951 | ier = NF90_DEF_VAR (forcing_id,'index', r_typ,d_id(1),vid) |
|---|
| 952 | ier = NF90_DEF_VAR (forcing_id,'contfrac', r_typ,d_id(1),vid) |
|---|
| 953 | ier = NF90_DEF_VAR (forcing_id,'lalo', & |
|---|
| 954 | r_typ,(/ d_id(1),d_id(4) /),vid) |
|---|
| 955 | ier = NF90_DEF_VAR (forcing_id,'neighbours', & |
|---|
| 956 | r_typ,(/ d_id(1),d_id(5) /),vid) |
|---|
| 957 | ier = NF90_DEF_VAR (forcing_id,'resolution', & |
|---|
| 958 | r_typ,(/ d_id(1),d_id(4) /),vid) |
|---|
| 959 | ier = NF90_DEF_VAR (forcing_id,'clay', & |
|---|
| 960 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 961 | ier = NF90_DEF_VAR (forcing_id,'humrel', & |
|---|
| 962 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 963 | ier = NF90_DEF_VAR (forcing_id,'litterhum', & |
|---|
| 964 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 965 | ier = NF90_DEF_VAR (forcing_id,'t2m', & |
|---|
| 966 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 967 | ier = NF90_DEF_VAR (forcing_id,'t2m_min', & |
|---|
| 968 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 969 | ier = NF90_DEF_VAR (forcing_id,'tsurf', & |
|---|
| 970 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 971 | ier = NF90_DEF_VAR (forcing_id,'tsoil', & |
|---|
| 972 | r_typ,(/ d_id(1),d_id(2),d_id(6) /),vid) |
|---|
| 973 | ier = NF90_DEF_VAR (forcing_id,'soilhum', & |
|---|
| 974 | r_typ,(/ d_id(1),d_id(2),d_id(6) /),vid) |
|---|
| 975 | ier = NF90_DEF_VAR (forcing_id,'precip', & |
|---|
| 976 | r_typ,(/ d_id(1),d_id(6) /),vid) |
|---|
| 977 | ier = NF90_DEF_VAR (forcing_id,'gpp', & |
|---|
| 978 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 979 | ier = NF90_DEF_VAR (forcing_id,'veget', & |
|---|
| 980 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 981 | ier = NF90_DEF_VAR (forcing_id,'veget_max', & |
|---|
| 982 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 983 | ier = NF90_DEF_VAR (forcing_id,'lai', & |
|---|
| 984 | r_typ,(/ d_id(1),d_id(3),d_id(6) /),vid) |
|---|
| 985 | ier = NF90_ENDDEF (forcing_id) |
|---|
| 986 | |
|---|
| 987 | ! Given the name of a varaible, nf90_inq_varid finds the variable |
|---|
| 988 | ! ID (::vid). Put data value(s) into variable ::vid |
|---|
| 989 | ier = NF90_INQ_VARID (forcing_id,'points',vid) |
|---|
| 990 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 991 | (/(REAL(i,r_std),i=1,nbp_glo) /)) |
|---|
| 992 | ier = NF90_INQ_VARID (forcing_id,'layers',vid) |
|---|
| 993 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nslm)/)) |
|---|
| 994 | ier = NF90_INQ_VARID (forcing_id,'pft',vid) |
|---|
| 995 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nvm)/)) |
|---|
| 996 | ier = NF90_INQ_VARID (forcing_id,'direction',vid) |
|---|
| 997 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,2)/)) |
|---|
| 998 | ier = NF90_INQ_VARID (forcing_id,'nneigh',vid) |
|---|
| 999 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,8)/)) |
|---|
| 1000 | ier = NF90_INQ_VARID (forcing_id,'time',vid) |
|---|
| 1001 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nsft)/)) |
|---|
| 1002 | ier = NF90_INQ_VARID (forcing_id,'nbparts',vid) |
|---|
| 1003 | ier = NF90_PUT_VAR (forcing_id,vid,(/(REAL(i,r_std),i=1,nparts)/)) |
|---|
| 1004 | ier = NF90_INQ_VARID (forcing_id,'index',vid) |
|---|
| 1005 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(index_g,r_std)) |
|---|
| 1006 | ier = NF90_INQ_VARID (forcing_id,'contfrac',vid) |
|---|
| 1007 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(contfrac_g,r_std)) |
|---|
| 1008 | ier = NF90_INQ_VARID (forcing_id,'lalo',vid) |
|---|
| 1009 | ier = NF90_PUT_VAR (forcing_id,vid,lalo_g) |
|---|
| 1010 | !ym attention a neighbours, a modifier plus tard |
|---|
| 1011 | ier = NF90_INQ_VARID (forcing_id,'neighbours',vid) |
|---|
| 1012 | ier = NF90_PUT_VAR (forcing_id,vid,REAL(neighbours_g,r_std)) |
|---|
| 1013 | ier = NF90_INQ_VARID (forcing_id,'resolution',vid) |
|---|
| 1014 | ier = NF90_PUT_VAR (forcing_id,vid,resolution_g) |
|---|
| 1015 | ENDIF ! is_root_prc |
|---|
| 1016 | ENDIF ! (forcing_name) /= 'NONE' |
|---|
| 1017 | ENDIF ! ok_co2 =.TRUE. |
|---|
| 1018 | |
|---|
| 1019 | !! 1.4.7 write forcing file for forcesoil |
|---|
| 1020 | !! 1.4.7.1 Initialize |
|---|
| 1021 | !Config Key = STOMATE_CFORCING_NAME |
|---|
| 1022 | !Config Desc = Name of STOMATE's carbon forcing file |
|---|
| 1023 | !Config If = OK_STOMATE |
|---|
| 1024 | !Config Def = NONE |
|---|
| 1025 | !Config Help = Name that will be given to STOMATE's carbon |
|---|
| 1026 | !Config offline forcing file |
|---|
| 1027 | !Config Compatible with Nicolas Viovy's driver |
|---|
| 1028 | !Config Units = [FILE] |
|---|
| 1029 | Cforcing_name = stomate_Cforcing_name |
|---|
| 1030 | CALL getin_p('STOMATE_CFORCING_NAME',Cforcing_name) |
|---|
| 1031 | |
|---|
| 1032 | IF ( TRIM(Cforcing_name) /= 'NONE' ) THEN |
|---|
| 1033 | |
|---|
| 1034 | ! Time step of forcesoil |
|---|
| 1035 | !Config Key = FORCESOIL_STEP_PER_YEAR |
|---|
| 1036 | !Config Desc = Number of time steps per year for carbon spinup. |
|---|
| 1037 | !Config If = OK_STOMATE |
|---|
| 1038 | !Config Def = 365 |
|---|
| 1039 | !Config Help = Number of time steps per year for carbon spinup. |
|---|
| 1040 | !Config Units = [days, months, year] |
|---|
| 1041 | nparan = 365 |
|---|
| 1042 | CALL getin_p('FORCESOIL_STEP_PER_YEAR', nparan) |
|---|
| 1043 | |
|---|
| 1044 | ! Correct if setting is out of bounds |
|---|
| 1045 | IF ( nparan < 1 ) nparan = 1 |
|---|
| 1046 | |
|---|
| 1047 | !Config Key = FORCESOIL_NB_YEAR |
|---|
| 1048 | !Config Desc = Number of years saved for carbon spinup. |
|---|
| 1049 | !Config If = OK_STOMATE |
|---|
| 1050 | !Config Def = 1 |
|---|
| 1051 | !Config Help = Number of years saved for carbon spinup. If internal parameter cumul_Cforcing is TRUE in stomate.f90 |
|---|
| 1052 | !Config Then this parameter is forced to one. |
|---|
| 1053 | !Config Units = [years] |
|---|
| 1054 | CALL getin_p('FORCESOIL_NB_YEAR', nbyear) |
|---|
| 1055 | |
|---|
| 1056 | ! Set ::nbyear to 1. if ::cumul_Cforcing=.TRUE. |
|---|
| 1057 | IF ( cumul_Cforcing ) THEN |
|---|
| 1058 | CALL ipslerr_p (1,'stomate', & |
|---|
| 1059 | 'Internal parameter cumul_Cforcing is TRUE in stomate.f90', & |
|---|
| 1060 | 'Parameter FORCESOIL_NB_YEAR is therefore forced to 1.', & |
|---|
| 1061 | '::nbyear is thus set to 1.') |
|---|
| 1062 | nbyear=1 |
|---|
| 1063 | ENDIF |
|---|
| 1064 | |
|---|
| 1065 | ! Make use of ::nparan to calculate ::dt_forcesoil |
|---|
| 1066 | dt_forcesoil = zero |
|---|
| 1067 | nparan = nparan+1 |
|---|
| 1068 | DO WHILE ( dt_forcesoil < dt_stomate/one_day ) |
|---|
| 1069 | nparan = nparan-1 |
|---|
| 1070 | IF ( nparan < 1 ) THEN |
|---|
| 1071 | STOP 'Problem with number of soil forcing time steps ::nparan < 1.' |
|---|
| 1072 | ENDIF |
|---|
| 1073 | dt_forcesoil = one_year/REAL(nparan,r_std) |
|---|
| 1074 | ENDDO |
|---|
| 1075 | IF ( nparan > nparanmax ) THEN |
|---|
| 1076 | STOP 'Problem with number of soil forcing time steps ::nparan > ::nparanmax' |
|---|
| 1077 | ENDIF |
|---|
| 1078 | IF (printlev>=2) WRITE(numout,*) 'Time step of soil forcing (d): ',dt_forcesoil |
|---|
| 1079 | |
|---|
| 1080 | ! Allocate memory for the forcing variables of soil dynamics |
|---|
| 1081 | ALLOCATE( nforce(nparan*nbyear)) |
|---|
| 1082 | nforce(:) = 0 |
|---|
| 1083 | ALLOCATE(control_moist(kjpindex,nlevs,nparan*nbyear)) |
|---|
| 1084 | ALLOCATE(npp_equil(kjpindex,nparan*nbyear)) |
|---|
| 1085 | ALLOCATE(npp_tot(kjpindex)) |
|---|
| 1086 | ALLOCATE(control_temp(kjpindex,nlevs,nparan*nbyear)) |
|---|
| 1087 | ALLOCATE(soilcarbon_input(kjpindex,ncarb,nvm,nparan*nbyear)) |
|---|
| 1088 | |
|---|
| 1089 | ! Initialize variables, set to zero |
|---|
| 1090 | control_moist(:,:,:) = zero |
|---|
| 1091 | npp_equil(:,:) = zero |
|---|
| 1092 | npp_tot(:) = zero |
|---|
| 1093 | control_temp(:,:,:) = zero |
|---|
| 1094 | soilcarbon_input(:,:,:,:) = zero |
|---|
| 1095 | |
|---|
| 1096 | ENDIF ! Cforcing_name) /= 'NONE' |
|---|
| 1097 | |
|---|
| 1098 | !! 1.4.8 Calculate STOMATE's vegetation fractions from veget, veget_max |
|---|
| 1099 | DO j=1,nvm |
|---|
| 1100 | WHERE ((1.-totfrac_nobio(:)) > min_sechiba) |
|---|
| 1101 | ! Pixels with vegetation |
|---|
| 1102 | veget_cov(:,j) = veget(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1103 | veget_cov_max(:,j) = veget_max(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1104 | ELSEWHERE |
|---|
| 1105 | ! Pixels without vegetation |
|---|
| 1106 | veget_cov(:,j) = zero |
|---|
| 1107 | veget_cov_max(:,j) = zero |
|---|
| 1108 | ENDWHERE |
|---|
| 1109 | ENDDO ! Loop over PFTs |
|---|
| 1110 | |
|---|
| 1111 | !! 1.4.9 Initialize non-zero variables |
|---|
| 1112 | CALL stomate_var_init & |
|---|
| 1113 | (kjpindex, veget_cov_max, leaf_age, leaf_frac, & |
|---|
| 1114 | dead_leaves, & |
|---|
| 1115 | veget, lai, deadleaf_cover, assim_param) |
|---|
| 1116 | |
|---|
| 1117 | ! Initialize land cover change variable |
|---|
| 1118 | ! ??Should be integrated in the subroutine?? |
|---|
| 1119 | harvest_above(:) = zero |
|---|
| 1120 | |
|---|
| 1121 | ! Initialize temp_growth |
|---|
| 1122 | temp_growth(:)=t2m_month(:)-tp_00 |
|---|
| 1123 | |
|---|
| 1124 | |
|---|
| 1125 | END SUBROUTINE stomate_initialize |
|---|
| 1126 | |
|---|
| 1127 | |
|---|
| 1128 | !! ================================================================================================================================ |
|---|
| 1129 | !! SUBROUTINE : stomate_main |
|---|
| 1130 | !! |
|---|
| 1131 | !>\BRIEF Manages variable initialisation, reading and writing forcing |
|---|
| 1132 | !! files, aggregating data at stomate's time step (dt_stomate), aggregating data |
|---|
| 1133 | !! at longer time scale (i.e. for phenology) and uses these forcing to calculate |
|---|
| 1134 | !! CO2 fluxes (NPP and respirations) and C-pools (litter, soil, biomass, ...) |
|---|
| 1135 | !! |
|---|
| 1136 | !! DESCRIPTION : The subroutine manages |
|---|
| 1137 | !! divers tasks: |
|---|
| 1138 | !! (1) Initializing all variables of stomate (first call) |
|---|
| 1139 | !! (2) Reading and writing forcing data (last call) |
|---|
| 1140 | !! (3) Adding CO2 fluxes to the IPCC history files |
|---|
| 1141 | !! (4) Converting the time steps of variables to maintain consistency between |
|---|
| 1142 | !! sechiba and stomate |
|---|
| 1143 | !! (5) Use these variables to call stomate_lpj, maint_respiration, littercalc, |
|---|
| 1144 | !! soilcarbon. The called subroutines handle: climate constraints |
|---|
| 1145 | !! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 1146 | !! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 1147 | !! all turnover processes, light competition, sapling establishment, lai, |
|---|
| 1148 | !! land cover change and litter and soil dynamics. |
|---|
| 1149 | !! (6) Use the spin-up method developed by Lardy (2011)(only if SPINUP_ANALYTIC |
|---|
| 1150 | !! is set to TRUE). |
|---|
| 1151 | !! |
|---|
| 1152 | !! RECENT CHANGE(S) : None |
|---|
| 1153 | !! |
|---|
| 1154 | !! MAIN OUTPUT VARIABLE(S): deadleaf_cover, assim_param, lai, height, veget, |
|---|
| 1155 | !! veget_max, resp_maint, |
|---|
| 1156 | !! resp_hetero,resp_growth, co2_flux, fco2_lu. |
|---|
| 1157 | !! |
|---|
| 1158 | !! REFERENCES : |
|---|
| 1159 | !! - Lardy, R, et al., A new method to determine soil organic carbon equilibrium, |
|---|
| 1160 | !! Environmental Modelling & Software (2011), doi:10.1016|j.envsoft.2011.05.016 |
|---|
| 1161 | !! |
|---|
| 1162 | !! FLOWCHART : |
|---|
| 1163 | !! \latexonly |
|---|
| 1164 | !! \includegraphics[scale=0.5]{stomatemainflow.png} |
|---|
| 1165 | !! \endlatexonly |
|---|
| 1166 | !! \n |
|---|
| 1167 | !_ ================================================================================================================================ |
|---|
| 1168 | |
|---|
| 1169 | SUBROUTINE stomate_main & |
|---|
| 1170 | & (kjit, kjpij, kjpindex, & |
|---|
| 1171 | & index, lalo, neighbours, resolution, contfrac, totfrac_nobio, clay, & |
|---|
| 1172 | & temp_air, temp_sol, stempdiag, & !IGEMt2m |
|---|
| 1173 | & humrel, shumdiag, litterhumdiag, precip_rain, precip_snow, & |
|---|
| 1174 | & gpp, deadleaf_cover, assim_param, & |
|---|
| 1175 | & lai, frac_age, height, veget, veget_max, & |
|---|
| 1176 | & veget_max_new, woodharvest, totfrac_nobio_new, fraclut, & |
|---|
| 1177 | & rest_id_stom, hist_id_stom, hist_id_stom_IPCC, & |
|---|
| 1178 | & co2_flux, fco2_lu, resp_maint,resp_hetero,resp_growth,co2_to_bm_radia,temp_growth) |
|---|
| 1179 | |
|---|
| 1180 | IMPLICIT NONE |
|---|
| 1181 | |
|---|
| 1182 | |
|---|
| 1183 | !! 0. Variable and parameter declaration |
|---|
| 1184 | |
|---|
| 1185 | !! 0.1 Input variables |
|---|
| 1186 | |
|---|
| 1187 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 1188 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 1189 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid (unitless) |
|---|
| 1190 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier (unitless) |
|---|
| 1191 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier (unitless) |
|---|
| 1192 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 1193 | !! (unitless) |
|---|
| 1194 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! Indices of the pixels on the map. Stomate uses a |
|---|
| 1195 | !! reduced grid excluding oceans. ::index contains |
|---|
| 1196 | !! the indices of the terrestrial pixels only |
|---|
| 1197 | !! (unitless) |
|---|
| 1198 | INTEGER(i_std),DIMENSION(kjpindex,NbNeighb),INTENT(in) :: neighbours !! Neighoring grid points if land for the DGVM |
|---|
| 1199 | !! (unitless) |
|---|
| 1200 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geographical coordinates (latitude,longitude) |
|---|
| 1201 | !! for pixels (degrees) |
|---|
| 1202 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: resolution !! Size in x an y of the grid (m) - surface area of |
|---|
| 1203 | !! the gridbox |
|---|
| 1204 | REAL(r_std),DIMENSION (kjpindex), INTENT (in) :: contfrac !! Fraction of continent in the grid cell (unitless) |
|---|
| 1205 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio !! Fraction of grid cell covered by lakes, land |
|---|
| 1206 | !! ice, cities, ... (unitless) |
|---|
| 1207 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 1208 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: humrel !! Relative humidity ("moisture availability") |
|---|
| 1209 | !! (0-1, unitless) |
|---|
| 1210 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: temp_air !! Air temperature at first atmosperic model layer (K) |
|---|
| 1211 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: temp_sol !! Surface temperature (K) |
|---|
| 1212 | REAL(r_std),DIMENSION(kjpindex,nslm),INTENT(in) :: stempdiag !! Soil temperature (K) |
|---|
| 1213 | REAL(r_std),DIMENSION(kjpindex,nslm),INTENT(in) :: shumdiag !! Relative soil moisture (0-1, unitless) |
|---|
| 1214 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: litterhumdiag !! Litter humidity (0-1, unitless) |
|---|
| 1215 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: precip_rain !! Rain precipitation |
|---|
| 1216 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1217 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: precip_snow !! Snow precipitation |
|---|
| 1218 | !! @tex $(mm dt_stomate^{-1})$ @endtex |
|---|
| 1219 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: gpp !! GPP of total ground area |
|---|
| 1220 | !! @tex $(gC m^{-2} time step^{-1})$ @endtex |
|---|
| 1221 | !! Calculated in sechiba, account for vegetation |
|---|
| 1222 | !! cover and effective time step to obtain ::gpp_d |
|---|
| 1223 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_max_new !! New "maximal" coverage fraction of a PFT: only if |
|---|
| 1224 | !! vegetation is updated in slowproc |
|---|
| 1225 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: woodharvest !! Harvested wood biomass (gC m-2 yr-1) |
|---|
| 1226 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: totfrac_nobio_new !! New fraction of nobio per gridcell |
|---|
| 1227 | REAL(r_std),DIMENSION(kjpindex, nlut),INTENT(in):: fraclut !! Fraction of landuse tiles |
|---|
| 1228 | |
|---|
| 1229 | !! 0.2 Output variables |
|---|
| 1230 | |
|---|
| 1231 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_flux !! CO2 flux between atmosphere and biosphere per |
|---|
| 1232 | !! average ground area |
|---|
| 1233 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1234 | !! [??CHECK] sign convention? |
|---|
| 1235 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: fco2_lu !! CO2 flux between atmosphere and biosphere from |
|---|
| 1236 | !! land-use (without forest management) |
|---|
| 1237 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1238 | !! [??CHECK] sign convention? |
|---|
| 1239 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_maint !! Maitenance component of autotrophic respiration in |
|---|
| 1240 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1241 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_growth !! Growth component of autotrophic respiration in |
|---|
| 1242 | !! @tex ($gC m^{-2} dt_stomate^{-1}$) @endtex |
|---|
| 1243 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: resp_hetero !! Heterotrophic respiration in |
|---|
| 1244 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1245 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(out) :: co2_to_bm_radia !! Virtual gpp created for equilibrium of carbon mass |
|---|
| 1246 | !! @tex $(gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1247 | REAL(r_std),DIMENSION(kjpindex),INTENT(out) :: temp_growth !! Growth temperature (ðC) |
|---|
| 1248 | !! Is equal to t2m_month |
|---|
| 1249 | |
|---|
| 1250 | !! 0.3 Modified |
|---|
| 1251 | |
|---|
| 1252 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: lai !! Leaf area inex @tex $(m^2 m^{-2})$ @endtex |
|---|
| 1253 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget !! Fraction of vegetation type including |
|---|
| 1254 | !! non-biological fraction (unitless) |
|---|
| 1255 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: veget_max !! Maximum fraction of vegetation type including |
|---|
| 1256 | !! non-biological fraction (unitless) |
|---|
| 1257 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(inout) :: height !! Height of vegetation (m) |
|---|
| 1258 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(inout) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 1259 | !! photosynthesis |
|---|
| 1260 | !! @tex $(\mu mol m^{-2}s^{-1})$ @endtex |
|---|
| 1261 | REAL(r_std),DIMENSION(kjpindex),INTENT(inout) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 1262 | !! (unitless) |
|---|
| 1263 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages),INTENT(inout):: frac_age !! Age efficacity from STOMATE |
|---|
| 1264 | |
|---|
| 1265 | !! 0.4 local variables |
|---|
| 1266 | |
|---|
| 1267 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 1268 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 1269 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 1270 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 1271 | REAL(r_std),DIMENSION(0:nslm) :: z_soil !! Variable to store depth of the different soil |
|---|
| 1272 | !! layers (m) |
|---|
| 1273 | REAL(r_std),DIMENSION(kjpindex,nvm) :: rprof !! Coefficient of the exponential functions that |
|---|
| 1274 | !! relates root density to soil depth (unitless) |
|---|
| 1275 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 1276 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 1277 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 1278 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 1279 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1280 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 1281 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 1282 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_litter !! Litter heterotrophic respiration per ground area |
|---|
| 1283 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1284 | !! ??Same variable is also used to |
|---|
| 1285 | !! store heterotrophic respiration per ground area |
|---|
| 1286 | !! over ::dt_sechiba?? |
|---|
| 1287 | REAL(r_std),DIMENSION(kjpindex,nvm) :: resp_hetero_soil !! soil heterotrophic respiration |
|---|
| 1288 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1289 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 1290 | !! covered by a PFT (fraction of ground area), |
|---|
| 1291 | !! taking into account LAI ??(= grid scale fpc)?? |
|---|
| 1292 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov_max_new !! New value for maximal fractional coverage (unitless) |
|---|
| 1293 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Maximum rate of carboxylation |
|---|
| 1294 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 1295 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 1296 | !! (0-1, unitless) |
|---|
| 1297 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 1298 | !! respiration, above and below (0-1, unitless) |
|---|
| 1299 | REAL(r_std),DIMENSION(kjpindex,ncarb,nvm) :: soilcarbon_input_inst !! Quantity of carbon going into carbon pools from |
|---|
| 1300 | !! litter decomposition |
|---|
| 1301 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 1302 | |
|---|
| 1303 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 1304 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time |
|---|
| 1305 | !! step |
|---|
| 1306 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 1307 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 1308 | !! time step on one processor (Mb) |
|---|
| 1309 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 1310 | !! time step on all processors(Mb) |
|---|
| 1311 | REAL(r_std) :: xn !! How many times have we treated in this forcing |
|---|
| 1312 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 1313 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 1314 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 1315 | INTEGER(i_std) :: direct !! ?? |
|---|
| 1316 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! ?? |
|---|
| 1317 | REAL(r_std) :: net_nep_monthly !! Integrated nep_monthly over all grid-cells on local domain |
|---|
| 1318 | REAL(r_std) :: net_nep_monthly_sum !! Integrated nep_monthly over all grid-cells on total domain(global) |
|---|
| 1319 | REAL(r_std),DIMENSION(nbp_glo) :: clay_g !! Clay fraction of soil (0-1, unitless), parallel |
|---|
| 1320 | !! computing |
|---|
| 1321 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:,:) :: soilcarbon_input_g !! Quantity of carbon going into carbon pools from |
|---|
| 1322 | !! litter decomposition |
|---|
| 1323 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex, parallel |
|---|
| 1324 | !! computing |
|---|
| 1325 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_moist_g !! Moisture control of heterotrophic respiration |
|---|
| 1326 | !! (0-1, unitless), parallel computing |
|---|
| 1327 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_temp_g !! Temperature control of heterotrophic respiration |
|---|
| 1328 | !! (0-1, unitless), parallel computing |
|---|
| 1329 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: npp_equil_g !! Equilibrium NPP written to forcesoil |
|---|
| 1330 | !! @tex $(gC m^{-2} year^{-1})$ @endtex, parallel |
|---|
| 1331 | !! computing |
|---|
| 1332 | |
|---|
| 1333 | REAL(r_std) :: net_cflux_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1334 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1335 | !! computing |
|---|
| 1336 | REAL(r_std) :: net_cflux_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1337 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1338 | !! computing |
|---|
| 1339 | REAL(r_std) :: net_harvest_above_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1340 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1341 | !! computing |
|---|
| 1342 | REAL(r_std) :: net_harvest_above_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1343 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1344 | !! computing |
|---|
| 1345 | REAL(r_std) :: net_biosp_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1346 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1347 | !! computing |
|---|
| 1348 | REAL(r_std) :: net_biosp_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 1349 | !! reduce_sum and one for bcast??), parallel |
|---|
| 1350 | !! computing |
|---|
| 1351 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 1352 | !! used by ORCHIDEE |
|---|
| 1353 | |
|---|
| 1354 | !_ ================================================================================================================================ |
|---|
| 1355 | |
|---|
| 1356 | !! 1. Initialize variables |
|---|
| 1357 | |
|---|
| 1358 | !! 1.1 Store current time step in a common variable |
|---|
| 1359 | itime = kjit |
|---|
| 1360 | |
|---|
| 1361 | !! 1.3 PFT rooting depth across pixels, humescte is pre-defined |
|---|
| 1362 | ! (constantes_veg.f90). It is defined as the coefficient of an exponential |
|---|
| 1363 | ! function relating root density to depth |
|---|
| 1364 | DO j=1,nvm |
|---|
| 1365 | rprof(:,j) = 1./humcste(j) |
|---|
| 1366 | ENDDO |
|---|
| 1367 | |
|---|
| 1368 | !! 1.4 Initialize first call |
|---|
| 1369 | ! Set growth respiration to zero |
|---|
| 1370 | resp_growth=zero |
|---|
| 1371 | |
|---|
| 1372 | ! Check that initialization is done |
|---|
| 1373 | IF (l_first_stomate) CALL ipslerr_p(3,'stomate_main','Initialization not yet done.','','') |
|---|
| 1374 | |
|---|
| 1375 | IF (printlev >= 4) THEN |
|---|
| 1376 | WRITE(numout,*) 'stomate_main: date=',days_since_beg,' ymds=', year_end, month_end, day_end, sec_end, & |
|---|
| 1377 | ' itime=', itime, ' do_slow=',do_slow |
|---|
| 1378 | ENDIF |
|---|
| 1379 | |
|---|
| 1380 | !! 3. Special treatment for some input arrays. |
|---|
| 1381 | |
|---|
| 1382 | !! 3.1 Sum of liquid and solid precipitation |
|---|
| 1383 | precip(:) = ( precip_rain(:) + precip_snow(:) )*one_day/dt_sechiba |
|---|
| 1384 | |
|---|
| 1385 | !! 3.2 Calculate STOMATE's vegetation fractions from veget and veget_max |
|---|
| 1386 | DO j=1,nvm |
|---|
| 1387 | WHERE ((1.-totfrac_nobio(:)) > min_sechiba) |
|---|
| 1388 | ! Pixels with vegetation |
|---|
| 1389 | veget_cov(:,j) = veget(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1390 | veget_cov_max(:,j) = veget_max(:,j)/( 1.-totfrac_nobio(:) ) |
|---|
| 1391 | ELSEWHERE |
|---|
| 1392 | ! Pixels without vegetation |
|---|
| 1393 | veget_cov(:,j) = zero |
|---|
| 1394 | veget_cov_max(:,j) = zero |
|---|
| 1395 | ENDWHERE |
|---|
| 1396 | ENDDO |
|---|
| 1397 | |
|---|
| 1398 | IF ( do_now_stomate_lcchange ) THEN |
|---|
| 1399 | DO j=1,nvm |
|---|
| 1400 | WHERE ((1.-totfrac_nobio_new(:)) > min_sechiba) |
|---|
| 1401 | ! Pixels with vegetation |
|---|
| 1402 | veget_cov_max_new(:,j) = veget_max_new(:,j)/( 1.-totfrac_nobio_new(:) ) |
|---|
| 1403 | ELSEWHERE |
|---|
| 1404 | ! Pixels without vegetation |
|---|
| 1405 | veget_cov_max_new(:,j) = zero |
|---|
| 1406 | ENDWHERE |
|---|
| 1407 | ENDDO |
|---|
| 1408 | ENDIF |
|---|
| 1409 | |
|---|
| 1410 | !! 3.3 Adjust time step of GPP |
|---|
| 1411 | ! No GPP for bare soil |
|---|
| 1412 | gpp_d(:,1) = zero |
|---|
| 1413 | ! GPP per PFT |
|---|
| 1414 | DO j = 2,nvm |
|---|
| 1415 | WHERE (veget_cov_max(:,j) > min_stomate) |
|---|
| 1416 | ! The PFT is available on the pixel |
|---|
| 1417 | gpp_d(:,j) = gpp(:,j)/ veget_cov_max(:,j)* one_day/dt_sechiba |
|---|
| 1418 | ELSEWHERE |
|---|
| 1419 | ! The PFT is absent on the pixel |
|---|
| 1420 | gpp_d(:,j) = zero |
|---|
| 1421 | ENDWHERE |
|---|
| 1422 | ENDDO |
|---|
| 1423 | |
|---|
| 1424 | !! 4. Calculate variables for dt_stomate (i.e. "daily") |
|---|
| 1425 | |
|---|
| 1426 | ! Note: If dt_days /= 1, then variables 'xx_daily' (eg. half-daily or bi-daily) are by definition |
|---|
| 1427 | ! not expressed on a daily basis. This is not a problem but could be |
|---|
| 1428 | ! confusing |
|---|
| 1429 | |
|---|
| 1430 | !! 4.1 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 1431 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 1432 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 1433 | CALL stomate_accu (do_slow, humrel, humrel_daily) |
|---|
| 1434 | CALL stomate_accu (do_slow, litterhumdiag, litterhum_daily) |
|---|
| 1435 | CALL stomate_accu (do_slow, temp_air, t2m_daily) !IGEMt2m |
|---|
| 1436 | CALL stomate_accu (do_slow, temp_sol, tsurf_daily) |
|---|
| 1437 | CALL stomate_accu (do_slow, stempdiag, tsoil_daily) |
|---|
| 1438 | CALL stomate_accu (do_slow, shumdiag, soilhum_daily) |
|---|
| 1439 | CALL stomate_accu (do_slow, precip, precip_daily) |
|---|
| 1440 | CALL stomate_accu (do_slow, gpp_d, gpp_daily) |
|---|
| 1441 | |
|---|
| 1442 | !! 4.2 Daily minimum temperature |
|---|
| 1443 | t2m_min_daily(:) = MIN( temp_air(:), t2m_min_daily(:) ) !IGEMt2m |
|---|
| 1444 | |
|---|
| 1445 | !! 4.3 Calculate maintenance respiration |
|---|
| 1446 | ! Note: lai is passed as output argument to overcome previous problems with |
|---|
| 1447 | ! natural and agricultural vegetation types. |
|---|
| 1448 | CALL maint_respiration & |
|---|
| 1449 | & (kjpindex,lai,temp_air,t2m_longterm,stempdiag,height,veget_cov_max, & !IGEMt2m |
|---|
| 1450 | & rprof,biomass,resp_maint_part_radia) |
|---|
| 1451 | |
|---|
| 1452 | ! Aggregate maintenance respiration across the different plant parts |
|---|
| 1453 | resp_maint_radia(:,:) = zero |
|---|
| 1454 | DO j=2,nvm |
|---|
| 1455 | DO k= 1, nparts |
|---|
| 1456 | resp_maint_radia(:,j) = resp_maint_radia(:,j) & |
|---|
| 1457 | & + resp_maint_part_radia(:,j,k) |
|---|
| 1458 | ENDDO |
|---|
| 1459 | ENDDO |
|---|
| 1460 | |
|---|
| 1461 | ! Maintenance respiration separated by plant parts |
|---|
| 1462 | resp_maint_part(:,:,:) = resp_maint_part(:,:,:) & |
|---|
| 1463 | & + resp_maint_part_radia(:,:,:) |
|---|
| 1464 | |
|---|
| 1465 | !! 4.4 Litter dynamics and litter heterothropic respiration |
|---|
| 1466 | ! Including: litter update, lignin content, PFT parts, litter decay, |
|---|
| 1467 | ! litter heterotrophic respiration, dead leaf soil cover. |
|---|
| 1468 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 1469 | turnover_littercalc(:,:,:,:) = turnover_daily(:,:,:,:) * dt_sechiba/one_day |
|---|
| 1470 | bm_to_littercalc(:,:,:,:) = bm_to_litter(:,:,:,:) * dt_sechiba/one_day |
|---|
| 1471 | CALL littercalc (kjpindex, & |
|---|
| 1472 | turnover_littercalc, bm_to_littercalc, & |
|---|
| 1473 | veget_cov_max, temp_sol, stempdiag, shumdiag, litterhumdiag, & |
|---|
| 1474 | litterpart, litter, dead_leaves, lignin_struc, & |
|---|
| 1475 | deadleaf_cover, resp_hetero_litter, & |
|---|
| 1476 | soilcarbon_input_inst, control_temp_inst, control_moist_inst, & |
|---|
| 1477 | matrixA, vectorB) |
|---|
| 1478 | |
|---|
| 1479 | ! Heterothropic litter respiration during time step ::dt_sechiba @tex $(gC m^{-2})$ @endtex |
|---|
| 1480 | resp_hetero_litter(:,:) = resp_hetero_litter(:,:) * dt_sechiba/one_day |
|---|
| 1481 | |
|---|
| 1482 | !! 4.5 Soil carbon dynamics and soil heterotrophic respiration |
|---|
| 1483 | ! Note: there is no vertical discretisation in the soil for litter decay. |
|---|
| 1484 | CALL soilcarbon (kjpindex, clay, & |
|---|
| 1485 | soilcarbon_input_inst, control_temp_inst, control_moist_inst, veget_cov_max, & |
|---|
| 1486 | carbon, resp_hetero_soil, matrixA) |
|---|
| 1487 | |
|---|
| 1488 | ! Heterothropic soil respiration during time step ::dt_sechiba @tex $(gC m^{-2})$ @endtex |
|---|
| 1489 | resp_hetero_soil(:,:) = resp_hetero_soil(:,:) * dt_sechiba/one_day |
|---|
| 1490 | |
|---|
| 1491 | ! Total heterothrophic respiration during time step ::dt_sechiba @tex $(gC m^{-2})$ @endtex |
|---|
| 1492 | resp_hetero_radia(:,:) = resp_hetero_litter(:,:) + resp_hetero_soil(:,:) |
|---|
| 1493 | resp_hetero_d(:,:) = resp_hetero_d(:,:) + resp_hetero_radia(:,:) |
|---|
| 1494 | |
|---|
| 1495 | !! 4.6 Accumulate instantaneous variables (do_slow=.FALSE.) |
|---|
| 1496 | ! Accumulate instantaneous variables (do_slow=.FALSE.) and eventually |
|---|
| 1497 | ! calculate daily mean value (do_slow=.TRUE.) |
|---|
| 1498 | CALL stomate_accu (do_slow, control_moist_inst, control_moist_daily) |
|---|
| 1499 | CALL stomate_accu (do_slow, control_temp_inst, control_temp_daily) |
|---|
| 1500 | CALL stomate_accu (do_slow, soilcarbon_input_inst, soilcarbon_input_daily) |
|---|
| 1501 | |
|---|
| 1502 | !! 5. Daily processes - performed at the end of the day |
|---|
| 1503 | |
|---|
| 1504 | IF (do_slow) THEN |
|---|
| 1505 | |
|---|
| 1506 | !! 5.1 Update lai |
|---|
| 1507 | ! Use lai from stomate |
|---|
| 1508 | ! ?? check if this is the only time ok_pheno is used?? |
|---|
| 1509 | ! ?? Looks like it is the only time. But this variables probably is defined |
|---|
| 1510 | ! in stomate_constants or something, in which case, it is difficult to track. |
|---|
| 1511 | IF (ok_pheno) THEN |
|---|
| 1512 | !! 5.1.1 Update LAI |
|---|
| 1513 | ! Set lai of bare soil to zero |
|---|
| 1514 | lai(:,ibare_sechiba) = zero |
|---|
| 1515 | ! lai for all PFTs |
|---|
| 1516 | DO j = 2, nvm |
|---|
| 1517 | lai(:,j) = biomass(:,j,ileaf,icarbon)*sla(j) |
|---|
| 1518 | ENDDO |
|---|
| 1519 | frac_age(:,:,:) = leaf_frac(:,:,:) |
|---|
| 1520 | ELSE |
|---|
| 1521 | ! 5.1.2 Use a prescribed lai |
|---|
| 1522 | ! WARNING: code in setlai is identical to the lines above |
|---|
| 1523 | ! Update subroutine if LAI has to be forced |
|---|
| 1524 | CALL setlai(kjpindex,lai) |
|---|
| 1525 | frac_age(:,:,:) = zero |
|---|
| 1526 | ENDIF |
|---|
| 1527 | |
|---|
| 1528 | !! 5.2 Calculate long-term "meteorological" and biological parameters |
|---|
| 1529 | ! mainly in support of calculating phenology. If LastTsYear=.TRUE. |
|---|
| 1530 | ! annual values are update (i.e. xx_lastyear). |
|---|
| 1531 | CALL season & |
|---|
| 1532 | & (kjpindex, dt_days, & |
|---|
| 1533 | & veget_cov, veget_cov_max, & |
|---|
| 1534 | & humrel_daily, t2m_daily, tsoil_daily, soilhum_daily, lalo, & |
|---|
| 1535 | & precip_daily, npp_daily, biomass, & |
|---|
| 1536 | & turnover_daily, gpp_daily, when_growthinit, & |
|---|
| 1537 | & maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 1538 | & minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 1539 | & maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 1540 | & gdd0_lastyear, gdd0_thisyear, & |
|---|
| 1541 | & precip_lastyear, precip_thisyear, & |
|---|
| 1542 | & lm_lastyearmax, lm_thisyearmax, & |
|---|
| 1543 | & maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 1544 | & humrel_month, humrel_week, t2m_longterm, tau_longterm, & |
|---|
| 1545 | & t2m_month, t2m_week, tsoil_month, soilhum_month, & |
|---|
| 1546 | & npp_longterm, turnover_longterm, gpp_week, & |
|---|
| 1547 | & gdd_m5_dormance, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 1548 | & time_hum_min, hum_min_dormance, gdd_init_date, & |
|---|
| 1549 | & gdd_from_growthinit, herbivores, & |
|---|
| 1550 | & Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 1551 | & Tmin_spring_time, t2m_min_daily, begin_leaves, onset_date) |
|---|
| 1552 | |
|---|
| 1553 | !! 5.3 Use all processes included in stomate |
|---|
| 1554 | |
|---|
| 1555 | !! 5.3.1 Activate stomate processes |
|---|
| 1556 | ! Activate stomate processes (the complete list of processes depends |
|---|
| 1557 | ! on whether the DGVM is used or not). Processes include: climate constraints |
|---|
| 1558 | ! for PFTs, PFT dynamics, Phenology, Allocation, NPP (based on GPP and |
|---|
| 1559 | ! authothropic respiration), fire, mortality, vmax, assimilation temperatures, |
|---|
| 1560 | ! all turnover processes, light competition, sapling establishment, lai and |
|---|
| 1561 | ! land cover change. |
|---|
| 1562 | CALL StomateLpj & |
|---|
| 1563 | & (kjpindex, dt_days, & |
|---|
| 1564 | & neighbours, resolution, & |
|---|
| 1565 | & clay, herbivores, & |
|---|
| 1566 | & tsurf_daily, tsoil_daily, t2m_daily, t2m_min_daily, & |
|---|
| 1567 | & litterhum_daily, soilhum_daily, & |
|---|
| 1568 | & maxhumrel_lastyear, minhumrel_lastyear, & |
|---|
| 1569 | & gdd0_lastyear, precip_lastyear, & |
|---|
| 1570 | & humrel_month, humrel_week, t2m_longterm, t2m_month, t2m_week, & |
|---|
| 1571 | & tsoil_month, soilhum_month, & |
|---|
| 1572 | & gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 1573 | & turnover_longterm, gpp_daily, & |
|---|
| 1574 | & time_hum_min, maxfpc_lastyear, resp_maint_part,& |
|---|
| 1575 | & PFTpresent, age, fireindex, firelitter, & |
|---|
| 1576 | & leaf_age, leaf_frac, biomass, ind, adapted, regenerate, & |
|---|
| 1577 | & senescence, when_growthinit, litterpart, litter, & |
|---|
| 1578 | & dead_leaves, carbon, lignin_struc, & |
|---|
| 1579 | & veget_cov_max, veget_cov_max_new, woodharvest, fraclut, npp_longterm, lm_lastyearmax, & |
|---|
| 1580 | & veget_lastlight, everywhere, need_adjacent, RIP_time, & |
|---|
| 1581 | & lai, rprof,npp_daily, turnover_daily, turnover_time,& |
|---|
| 1582 | & control_moist_inst, control_temp_inst, soilcarbon_input_inst, & |
|---|
| 1583 | & co2_to_bm_dgvm, co2_fire, & |
|---|
| 1584 | & resp_hetero_d, resp_maint_d, resp_growth_d, & |
|---|
| 1585 | & height, deadleaf_cover, vcmax, & |
|---|
| 1586 | & bm_to_litter,& |
|---|
| 1587 | & prod10, prod100, flux10, flux100, & |
|---|
| 1588 | & convflux, cflux_prod10, cflux_prod100, & |
|---|
| 1589 | & prod10_harvest, prod100_harvest, flux10_harvest, flux100_harvest, & |
|---|
| 1590 | & convflux_harvest, cflux_prod10_harvest, cflux_prod100_harvest, woodharvestpft, & |
|---|
| 1591 | & convfluxpft, fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 1592 | & harvest_above, carb_mass_total, & |
|---|
| 1593 | & fpc_max, matrixA, & |
|---|
| 1594 | & Tseason, Tmin_spring_time, begin_leaves, onset_date) |
|---|
| 1595 | |
|---|
| 1596 | !! 5.3.2 Calculate the total CO2 flux from land use change |
|---|
| 1597 | fco2_lu(:) = convflux(:) & |
|---|
| 1598 | & + cflux_prod10(:) & |
|---|
| 1599 | & + cflux_prod100(:) & |
|---|
| 1600 | & + harvest_above(:) & |
|---|
| 1601 | & + convflux_harvest(:) & |
|---|
| 1602 | & + cflux_prod10_harvest(:) & |
|---|
| 1603 | & + cflux_prod100_harvest(:) |
|---|
| 1604 | |
|---|
| 1605 | !! 5.4 Calculate veget and veget_max |
|---|
| 1606 | veget_max(:,:) = zero |
|---|
| 1607 | DO j = 1, nvm |
|---|
| 1608 | veget_max(:,j) = veget_max(:,j) + & |
|---|
| 1609 | & veget_cov_max(:,j) * ( 1.-totfrac_nobio(:) ) |
|---|
| 1610 | ENDDO |
|---|
| 1611 | |
|---|
| 1612 | !! 5.5 Photosynthesis parameters |
|---|
| 1613 | assim_param(:,:,ivcmax) = zero |
|---|
| 1614 | DO j = 2,nvm |
|---|
| 1615 | assim_param(:,j,ivcmax) = vcmax(:,j) |
|---|
| 1616 | ENDDO |
|---|
| 1617 | |
|---|
| 1618 | !! 5.6 Update forcing variables for soil carbon |
|---|
| 1619 | IF (TRIM(Cforcing_name) /= 'NONE') THEN |
|---|
| 1620 | npp_tot(:) = 0 |
|---|
| 1621 | DO j=2,nvm |
|---|
| 1622 | npp_tot(:) = npp_tot(:) + npp_daily(:,j) |
|---|
| 1623 | ENDDO |
|---|
| 1624 | ! ::nbyear Number of years saved for carbon spinup |
|---|
| 1625 | sf_time = MODULO(REAL(days_since_beg,r_std)-1,one_year*REAL(nbyear,r_std)) |
|---|
| 1626 | iatt=FLOOR(sf_time/dt_forcesoil) + 1 |
|---|
| 1627 | IF (iatt == 0) iatt = iatt_old + 1 |
|---|
| 1628 | IF ((iatt<iatt_old) .and. (.not. cumul_Cforcing)) THEN |
|---|
| 1629 | nforce(:)=0 |
|---|
| 1630 | soilcarbon_input(:,:,:,:) = zero |
|---|
| 1631 | control_moist(:,:,:) = zero |
|---|
| 1632 | control_temp(:,:,:) = zero |
|---|
| 1633 | npp_equil(:,:) = zero |
|---|
| 1634 | ENDIF |
|---|
| 1635 | iatt_old = iatt |
|---|
| 1636 | ! Update forcing |
|---|
| 1637 | nforce(iatt) = nforce(iatt)+1 |
|---|
| 1638 | soilcarbon_input(:,:,:,iatt) = soilcarbon_input(:,:,:,iatt) + soilcarbon_input_daily(:,:,:) |
|---|
| 1639 | control_moist(:,:,iatt) = control_moist(:,:,iatt) + control_moist_daily(:,:) |
|---|
| 1640 | control_temp(:,:,iatt) = control_temp(:,:,iatt) + control_temp_daily(:,:) |
|---|
| 1641 | npp_equil(:,iatt) = npp_equil(:,iatt) + npp_tot(:) |
|---|
| 1642 | ENDIF |
|---|
| 1643 | |
|---|
| 1644 | !! 5.8 Write forcing file if ::ok_co2=.TRUE. |
|---|
| 1645 | ! Note: if STOMATE is run in coupled mode the forcing file is written |
|---|
| 1646 | ! If run in stand-alone mode, the forcing file is read! |
|---|
| 1647 | IF ( ok_co2 .AND. TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 1648 | |
|---|
| 1649 | !! 5.8.1 Convert GPP to sechiba time steps |
|---|
| 1650 | ! GPP is multiplied by coverage to obtain forcing @tex $(gC m^{-2} dt_stomate^{-1})$\f \end@tex $(m^2 m^{-2})$ @endtexonly |
|---|
| 1651 | ! @tex$ m^{-2}$ @endtex remains in the units because ::veget_cov_max is a fraction, not a |
|---|
| 1652 | ! surface area. In sechiba values are ponderated by surface and frac_no_bio. |
|---|
| 1653 | ! At the beginning of stomate, the units are converted. |
|---|
| 1654 | ! When we use forcesoil we call sechiba_main and so we need the have the same units as in sechiba. |
|---|
| 1655 | gpp_daily_x(:,:) = zero |
|---|
| 1656 | DO j = 2, nvm |
|---|
| 1657 | gpp_daily_x(:,j) = gpp_daily_x(:,j) + & |
|---|
| 1658 | & gpp_daily(:,j) * dt_stomate / one_day * veget_cov_max(:,j) |
|---|
| 1659 | ENDDO |
|---|
| 1660 | |
|---|
| 1661 | ! Bare soil moisture availability has not been treated |
|---|
| 1662 | ! in STOMATE, update it here |
|---|
| 1663 | humrel_daily(:,ibare_sechiba) = humrel(:,ibare_sechiba) |
|---|
| 1664 | |
|---|
| 1665 | ! Update index to store the next forcing step in memory |
|---|
| 1666 | iisf = iisf+1 |
|---|
| 1667 | |
|---|
| 1668 | ! How many times have we treated this forcing state |
|---|
| 1669 | xn = REAL(nf_cumul(isf(iisf)),r_std) |
|---|
| 1670 | |
|---|
| 1671 | !! 5.8.2 Cumulate forcing variables |
|---|
| 1672 | ! Cumulate forcing variables (calculate average) |
|---|
| 1673 | ! Note: precipitation is multiplied by dt_stomate/one_day to be consistent with |
|---|
| 1674 | ! the units in sechiba |
|---|
| 1675 | IF (cumul_forcing) THEN |
|---|
| 1676 | clay_fm(:,iisf) = (xn*clay_fm(:,iisf)+clay(:))/(xn+1.) |
|---|
| 1677 | humrel_daily_fm(:,:,iisf) = & |
|---|
| 1678 | & (xn*humrel_daily_fm(:,:,iisf) + humrel_daily(:,:))/(xn+1.) |
|---|
| 1679 | litterhum_daily_fm(:,iisf) = & |
|---|
| 1680 | & (xn*litterhum_daily_fm(:,iisf)+litterhum_daily(:))/(xn+1.) |
|---|
| 1681 | t2m_daily_fm(:,iisf) = & |
|---|
| 1682 | & (xn*t2m_daily_fm(:,iisf)+t2m_daily(:))/(xn+1.) |
|---|
| 1683 | t2m_min_daily_fm(:,iisf) = & |
|---|
| 1684 | & (xn*t2m_min_daily_fm(:,iisf)+t2m_min_daily(:))/(xn+1.) |
|---|
| 1685 | tsurf_daily_fm(:,iisf) = & |
|---|
| 1686 | & (xn*tsurf_daily_fm(:,iisf)+tsurf_daily(:))/(xn+1.) |
|---|
| 1687 | tsoil_daily_fm(:,:,iisf) = & |
|---|
| 1688 | & (xn*tsoil_daily_fm(:,:,iisf)+tsoil_daily(:,:))/(xn+1.) |
|---|
| 1689 | soilhum_daily_fm(:,:,iisf) = & |
|---|
| 1690 | & (xn*soilhum_daily_fm(:,:,iisf)+soilhum_daily(:,:))/(xn+1.) |
|---|
| 1691 | precip_fm(:,iisf) = & |
|---|
| 1692 | & (xn*precip_fm(:,iisf)+precip_daily(:)*dt_stomate/one_day)/(xn+1.) |
|---|
| 1693 | gpp_daily_fm(:,:,iisf) = & |
|---|
| 1694 | & (xn*gpp_daily_fm(:,:,iisf) + gpp_daily_x(:,:))/(xn+1.) |
|---|
| 1695 | veget_fm(:,:,iisf) = & |
|---|
| 1696 | & (xn*veget_fm(:,:,iisf) + veget(:,:) )/(xn+1.) |
|---|
| 1697 | veget_max_fm(:,:,iisf) = & |
|---|
| 1698 | & (xn*veget_max_fm(:,:,iisf) + veget_max(:,:) )/(xn+1.) |
|---|
| 1699 | lai_fm(:,:,iisf) = & |
|---|
| 1700 | & (xn*lai_fm(:,:,iisf) + lai(:,:) )/(xn+1.) |
|---|
| 1701 | ELSE |
|---|
| 1702 | ! Here we just calculate the values |
|---|
| 1703 | clay_fm(:,iisf) = clay(:) |
|---|
| 1704 | humrel_daily_fm(:,:,iisf) = humrel_daily(:,:) |
|---|
| 1705 | litterhum_daily_fm(:,iisf) = litterhum_daily(:) |
|---|
| 1706 | t2m_daily_fm(:,iisf) = t2m_daily(:) |
|---|
| 1707 | t2m_min_daily_fm(:,iisf) =t2m_min_daily(:) |
|---|
| 1708 | tsurf_daily_fm(:,iisf) = tsurf_daily(:) |
|---|
| 1709 | tsoil_daily_fm(:,:,iisf) =tsoil_daily(:,:) |
|---|
| 1710 | soilhum_daily_fm(:,:,iisf) =soilhum_daily(:,:) |
|---|
| 1711 | precip_fm(:,iisf) = precip_daily(:) |
|---|
| 1712 | gpp_daily_fm(:,:,iisf) =gpp_daily_x(:,:) |
|---|
| 1713 | veget_fm(:,:,iisf) = veget(:,:) |
|---|
| 1714 | veget_max_fm(:,:,iisf) =veget_max(:,:) |
|---|
| 1715 | lai_fm(:,:,iisf) =lai(:,:) |
|---|
| 1716 | ENDIF |
|---|
| 1717 | nf_cumul(isf(iisf)) = nf_cumul(isf(iisf))+1 |
|---|
| 1718 | |
|---|
| 1719 | ! 5.8.3 Do we have to write the forcing states? |
|---|
| 1720 | IF (iisf == nsfm) THEN |
|---|
| 1721 | |
|---|
| 1722 | !! 5.8.3.1 Write these forcing states |
|---|
| 1723 | CALL forcing_write(forcing_id,1,nsfm) |
|---|
| 1724 | ! determine which forcing states must be read |
|---|
| 1725 | isf(1) = isf(nsfm)+1 |
|---|
| 1726 | IF ( isf(1) > nsft ) isf(1) = 1 |
|---|
| 1727 | DO iisf = 2, nsfm |
|---|
| 1728 | isf(iisf) = isf(iisf-1)+1 |
|---|
| 1729 | IF (isf(iisf) > nsft) isf(iisf) = 1 |
|---|
| 1730 | ENDDO |
|---|
| 1731 | |
|---|
| 1732 | ! Read forcing variables - for debug use only |
|---|
| 1733 | ! CALL forcing_read(forcing_id,nsfm) |
|---|
| 1734 | iisf = 0 |
|---|
| 1735 | |
|---|
| 1736 | ENDIF |
|---|
| 1737 | |
|---|
| 1738 | ENDIF |
|---|
| 1739 | |
|---|
| 1740 | |
|---|
| 1741 | !! 5.9 Compute daily CO2 flux diagnostics |
|---|
| 1742 | ! CO2 flux in @tex $gC m^{-2} s^{-1}$ @endtex (positive from atmosphere to land) is sum of: |
|---|
| 1743 | ! (1) co2 taken up by photosyntyhesis + (2) co2 taken up in the DGVM to establish saplings |
|---|
| 1744 | ! - (3) plants maintenance respiration - (4) plants growth respiration |
|---|
| 1745 | ! - (5) heterotrophic respiration from ground |
|---|
| 1746 | ! - (6) co2 emission from fire |
|---|
| 1747 | ! co2_to_bm is not added as it is already encounted in gpp |
|---|
| 1748 | nep_daily(:,:)= gpp_daily(:,:) & |
|---|
| 1749 | - resp_maint_d(:,:) - resp_growth_d(:,:) & |
|---|
| 1750 | - resp_hetero_d(:,:) - co2_fire(:,:) |
|---|
| 1751 | |
|---|
| 1752 | CALL xios_orchidee_send_field("nep",SUM(nep_daily*veget_cov_max,dim=2)/1e3/one_day) |
|---|
| 1753 | CALL xios_orchidee_send_field("rhSoil",SUM(resp_hetero_soil*veget_cov_max,dim=2)/1e3) |
|---|
| 1754 | CALL xios_orchidee_send_field("rhLitter",SUM(resp_hetero_litter*veget_cov_max,dim=2)/1e3) |
|---|
| 1755 | |
|---|
| 1756 | |
|---|
| 1757 | IF ( hist_id_stom_IPCC > 0 ) THEN |
|---|
| 1758 | vartmp(:) = SUM(nep_daily*veget_cov_max,dim=2)/1e3/one_day*contfrac |
|---|
| 1759 | CALL histwrite_p (hist_id_stom_IPCC, "nep", itime, & |
|---|
| 1760 | vartmp, kjpindex, hori_index) |
|---|
| 1761 | ENDIF |
|---|
| 1762 | |
|---|
| 1763 | ! Cumulate nep, harvest and land use change fluxes |
|---|
| 1764 | nep_monthly(:,:) = nep_monthly(:,:) + nep_daily(:,:) |
|---|
| 1765 | harvest_above_monthly(:) = harvest_above_monthly(:) + harvest_above(:) |
|---|
| 1766 | cflux_prod_monthly(:) = cflux_prod_monthly(:) + convflux(:) + & |
|---|
| 1767 | & cflux_prod10(:) + cflux_prod100(:) + convflux_harvest(:) + & |
|---|
| 1768 | & cflux_prod10_harvest(:) + cflux_prod100_harvest(:) |
|---|
| 1769 | |
|---|
| 1770 | !! 5.10 Compute monthly CO2 fluxes |
|---|
| 1771 | IF ( LastTsMonth ) THEN |
|---|
| 1772 | !! 5.10.1 Write history file for monthly fluxes |
|---|
| 1773 | CALL histwrite_p (hist_id_stomate, 'CO2FLUX', itime, & |
|---|
| 1774 | nep_monthly, kjpindex*nvm, horipft_index) |
|---|
| 1775 | |
|---|
| 1776 | ! Integrate nep_monthly over all grid-cells on local domain |
|---|
| 1777 | net_nep_monthly = zero |
|---|
| 1778 | DO ji=1,kjpindex |
|---|
| 1779 | DO j=2,nvm |
|---|
| 1780 | net_nep_monthly = net_nep_monthly + & |
|---|
| 1781 | nep_monthly(ji,j)*resolution(ji,1)*resolution(ji,2)*contfrac(ji)*veget_cov_max(ji,j) |
|---|
| 1782 | ENDDO |
|---|
| 1783 | ENDDO |
|---|
| 1784 | ! Change unit from gC/m2 grid-cell into PgC/m2 grid-cell |
|---|
| 1785 | net_nep_monthly = net_nep_monthly*1e-15 |
|---|
| 1786 | |
|---|
| 1787 | |
|---|
| 1788 | !! 5.10.2 Cumulative fluxes of land use cover change, harvest and net biosphere production |
|---|
| 1789 | ! Parallel processing, gather the information from different processors. first argument is the |
|---|
| 1790 | ! local variable, the second argument is the global variable. bcast send it to all processors. |
|---|
| 1791 | net_cflux_prod_monthly_sum = & |
|---|
| 1792 | & SUM(cflux_prod_monthly(:)*resolution(:,1)*resolution(:,2)*contfrac(:))*1e-15 |
|---|
| 1793 | CALL reduce_sum(net_cflux_prod_monthly_sum,net_cflux_prod_monthly_tot) |
|---|
| 1794 | CALL bcast(net_cflux_prod_monthly_tot) |
|---|
| 1795 | net_harvest_above_monthly_sum = & |
|---|
| 1796 | & SUM(harvest_above_monthly(:)*resolution(:,1)*resolution(:,2)*contfrac(:))*1e-15 |
|---|
| 1797 | CALL reduce_sum(net_harvest_above_monthly_sum,net_harvest_above_monthly_tot) |
|---|
| 1798 | CALL bcast(net_harvest_above_monthly_tot) |
|---|
| 1799 | CALL reduce_sum(net_nep_monthly,net_nep_monthly_sum) |
|---|
| 1800 | CALL bcast(net_nep_monthly_sum) |
|---|
| 1801 | net_biosp_prod_monthly_tot = net_cflux_prod_monthly_tot + net_harvest_above_monthly_tot - net_nep_monthly_sum |
|---|
| 1802 | |
|---|
| 1803 | WRITE(numout,9010) 'GLOBAL net_cflux_prod_monthly (Peta gC/month) = ',net_cflux_prod_monthly_tot |
|---|
| 1804 | WRITE(numout,9010) 'GLOBAL net_harvest_above_monthly (Peta gC/month) = ',net_harvest_above_monthly_tot |
|---|
| 1805 | WRITE(numout,9010) 'GLOBAL net_nep_monthly (Peta gC/month) = ',net_nep_monthly_sum |
|---|
| 1806 | WRITE(numout,9010) 'GLOBAL net_biosp_prod_monthly (Peta gC/month) = ',net_biosp_prod_monthly_tot |
|---|
| 1807 | |
|---|
| 1808 | 9010 FORMAT(A52,F17.14) |
|---|
| 1809 | |
|---|
| 1810 | ! Reset Monthly values |
|---|
| 1811 | nep_monthly(:,:) = zero |
|---|
| 1812 | harvest_above_monthly(:) = zero |
|---|
| 1813 | cflux_prod_monthly(:) = zero |
|---|
| 1814 | |
|---|
| 1815 | ENDIF ! Monthly processes - at the end of the month |
|---|
| 1816 | |
|---|
| 1817 | IF (spinup_analytic) THEN |
|---|
| 1818 | nbp_accu(:) = nbp_accu(:) + (SUM(nep_daily(:,:) * veget_max(:,:),dim=2) - (convflux(:) + cflux_prod10(:) + & |
|---|
| 1819 | cflux_prod100(:)) - (convflux_harvest(:) + cflux_prod10_harvest(:) + & |
|---|
| 1820 | cflux_prod100_harvest(:)) - harvest_above(:))/1e3 |
|---|
| 1821 | ENDIF |
|---|
| 1822 | |
|---|
| 1823 | !! 5.11 Reset daily variables |
|---|
| 1824 | humrel_daily(:,:) = zero |
|---|
| 1825 | litterhum_daily(:) = zero |
|---|
| 1826 | t2m_daily(:) = zero |
|---|
| 1827 | t2m_min_daily(:) = large_value |
|---|
| 1828 | tsurf_daily(:) = zero |
|---|
| 1829 | tsoil_daily(:,:) = zero |
|---|
| 1830 | soilhum_daily(:,:) = zero |
|---|
| 1831 | precip_daily(:) = zero |
|---|
| 1832 | gpp_daily(:,:) = zero |
|---|
| 1833 | resp_maint_part(:,:,:)=zero |
|---|
| 1834 | resp_hetero_d=zero |
|---|
| 1835 | IF (printlev >= 3) THEN |
|---|
| 1836 | WRITE(numout,*) 'stomate_main: daily processes done' |
|---|
| 1837 | ENDIF |
|---|
| 1838 | |
|---|
| 1839 | ENDIF ! Daily processes - at the end of the day |
|---|
| 1840 | |
|---|
| 1841 | !! 6. Outputs from Stomate |
|---|
| 1842 | |
|---|
| 1843 | ! co2_flux receives a value from STOMATE only if STOMATE is activated. |
|---|
| 1844 | ! Otherwise, the calling hydrological module must do this itself. |
|---|
| 1845 | |
|---|
| 1846 | !! 6.1 Respiration and fluxes |
|---|
| 1847 | resp_maint(:,:) = resp_maint_radia(:,:)*veget_cov_max(:,:) |
|---|
| 1848 | resp_maint(:,ibare_sechiba) = zero |
|---|
| 1849 | resp_growth(:,:)= resp_growth_d(:,:)*veget_cov_max(:,:)*dt_sechiba/one_day |
|---|
| 1850 | co2_to_bm_radia(:,:)=co2_to_bm_dgvm(:,:)*veget_cov_max(:,:)*dt_sechiba/one_day |
|---|
| 1851 | resp_hetero(:,:) = resp_hetero_radia(:,:)*veget_cov_max(:,:) |
|---|
| 1852 | |
|---|
| 1853 | !! 6.2 Derived CO2 fluxes |
|---|
| 1854 | ! CO2 flux in gC m^{-2} s^{-1} (positive towards the atmosphere) is sum of: |
|---|
| 1855 | ! (1) heterotrophic respiration from ground + (2) maintenance respiration |
|---|
| 1856 | ! from the plants + (3) growth respiration from the plants + (4) co2 |
|---|
| 1857 | ! emissions from fire - (5) co2 taken up in the DGVM to establish |
|---|
| 1858 | ! saplings - (6) co2 taken up by photosyntyhesis |
|---|
| 1859 | ! co2_to_bm is not included here as it is already encounted in the gpp |
|---|
| 1860 | co2_flux(:,:) = resp_hetero(:,:) + resp_maint(:,:) + resp_growth(:,:) & |
|---|
| 1861 | & + co2_fire(:,:)*veget_cov_max(:,:)*dt_sechiba/one_day & |
|---|
| 1862 | & - gpp(:,:) |
|---|
| 1863 | |
|---|
| 1864 | temp_growth(:)=t2m_month(:)-tp_00 |
|---|
| 1865 | |
|---|
| 1866 | !! 7. Analytical spinup |
|---|
| 1867 | |
|---|
| 1868 | IF (spinup_analytic) THEN |
|---|
| 1869 | |
|---|
| 1870 | !! 7.1. Update V and U at sechiba time step |
|---|
| 1871 | DO m = 2,nvm |
|---|
| 1872 | DO j = 1,kjpindex |
|---|
| 1873 | ! V <- A * V |
|---|
| 1874 | MatrixV(j,m,:,:) = MATMUL(matrixA(j,m,:,:),MatrixV(j,m,:,:)) |
|---|
| 1875 | ! U <- A*U + B |
|---|
| 1876 | VectorU(j,m,:) = MATMUL(matrixA(j,m,:,:),VectorU(j,m,:)) + vectorB(j,m,:) |
|---|
| 1877 | ENDDO ! loop pixels |
|---|
| 1878 | ENDDO ! loop PFTS |
|---|
| 1879 | |
|---|
| 1880 | |
|---|
| 1881 | !! 7.2. What happened at the end of the year ? |
|---|
| 1882 | IF (LastTsYear) THEN |
|---|
| 1883 | |
|---|
| 1884 | ! |
|---|
| 1885 | ! 7.2.1 Increase the years counter every LastTsYear which is the last sechiba time step of each year |
|---|
| 1886 | ! |
|---|
| 1887 | global_years = global_years + 1 |
|---|
| 1888 | |
|---|
| 1889 | |
|---|
| 1890 | ! |
|---|
| 1891 | ! 7.2.3 Is global_years is a multiple of the period time ? |
|---|
| 1892 | ! |
|---|
| 1893 | |
|---|
| 1894 | ! |
|---|
| 1895 | ! 3.2.1 When global_years is a multiple of the spinup_period, we calculate : |
|---|
| 1896 | ! 1) the mean nbp flux over the period. This value is restarted |
|---|
| 1897 | ! 2) we solve the matrix system by Gauss Jordan method |
|---|
| 1898 | ! 3) We test if a point is at equilibrium : if yes, we mark the point (ok_equilibrium array) |
|---|
| 1899 | ! 4) Then we reset the matrix |
|---|
| 1900 | ! 5) We erase the carbon_stock calculated by ORCHIDEE by the one found by the method |
|---|
| 1901 | IF( MOD(global_years, spinup_period) == 0 ) THEN |
|---|
| 1902 | WRITE(numout,*) 'Spinup analytic : Calculate if system is in equlibrium. global_years=',global_years |
|---|
| 1903 | ! The number total of days during the forcing period is given by : |
|---|
| 1904 | ! spinup_period*365 (we consider only the noleap calendar) |
|---|
| 1905 | nbp_flux(:) = nbp_accu(:) / ( spinup_period * 365.) |
|---|
| 1906 | ! Reset the values |
|---|
| 1907 | nbp_accu(:) = zero |
|---|
| 1908 | |
|---|
| 1909 | carbon_stock(:,ibare_sechiba,:) = zero |
|---|
| 1910 | ! Prepare the matrix for the resolution |
|---|
| 1911 | ! Add a temporary matrix W which contains I-MatrixV |
|---|
| 1912 | ! we should take the opposite of matrixV and add the identitiy : we solve (I-MatrixV)*C = VectorU |
|---|
| 1913 | MatrixW(:,:,:,:) = moins_un * MatrixV(:,:,:,:) |
|---|
| 1914 | DO jv = 1,nbpools |
|---|
| 1915 | MatrixW(:,:,jv,jv) = MatrixW(:,:,jv,jv) + un |
|---|
| 1916 | ENDDO |
|---|
| 1917 | carbon_stock(:,:,:) = VectorU(:,:,:) |
|---|
| 1918 | |
|---|
| 1919 | ! |
|---|
| 1920 | ! Solve the linear system |
|---|
| 1921 | ! |
|---|
| 1922 | DO m = 2,nvm |
|---|
| 1923 | DO j = 1,kjpindex |
|---|
| 1924 | ! the solution will be stored in VectorU : so it should be restarted before |
|---|
| 1925 | ! loop over npts and nvm, so we solved npts*(nvm-1) (7,7) linear systems |
|---|
| 1926 | CALL gauss_jordan_method(nbpools,MatrixW(j,m,:,:),carbon_stock(j,m,:)) |
|---|
| 1927 | ENDDO ! loop pixels |
|---|
| 1928 | ENDDO ! loop PFTS |
|---|
| 1929 | |
|---|
| 1930 | ! Reset temporary matrixW |
|---|
| 1931 | MatrixW(:,:,:,:) = zero |
|---|
| 1932 | |
|---|
| 1933 | |
|---|
| 1934 | previous_stock(:,:,:) = current_stock(:,:,:) |
|---|
| 1935 | current_stock(:,:,:) = carbon_stock(:,:,:) |
|---|
| 1936 | ! The relative error is calculated over the passive carbon pool (sum over the pfts) over the pixel. |
|---|
| 1937 | CALL error_L1_passive(kjpindex,nvm, nbpools, current_stock, previous_stock, veget_max, & |
|---|
| 1938 | & eps_carbon, carbon_eq) |
|---|
| 1939 | |
|---|
| 1940 | !! ok_equilibrium is saved, |
|---|
| 1941 | WHERE( carbon_eq(:) .AND. .NOT.(ok_equilibrium(:)) ) |
|---|
| 1942 | ok_equilibrium(:) = .TRUE. |
|---|
| 1943 | ENDWHERE |
|---|
| 1944 | |
|---|
| 1945 | ! Reset matrixV for the pixel to the identity matrix and vectorU to zero |
|---|
| 1946 | MatrixV(:,:,:,:) = zero |
|---|
| 1947 | VectorU(:,:,:) = zero |
|---|
| 1948 | DO jv = 1,nbpools |
|---|
| 1949 | MatrixV(:,:,jv,jv) = un |
|---|
| 1950 | END DO |
|---|
| 1951 | IF (printlev >= 2) WRITE(numout,*) 'Reset for matrixV and VectorU done' |
|---|
| 1952 | |
|---|
| 1953 | !! Write the values found in the standard outputs of ORCHIDEE |
|---|
| 1954 | litter(:,istructural,:,iabove,icarbon) = carbon_stock(:,:,istructural_above) |
|---|
| 1955 | litter(:,istructural,:,ibelow,icarbon) = carbon_stock(:,:,istructural_below) |
|---|
| 1956 | litter(:,imetabolic,:,iabove,icarbon) = carbon_stock(:,:,imetabolic_above) |
|---|
| 1957 | litter(:,imetabolic,:,ibelow,icarbon) = carbon_stock(:,:,imetabolic_below) |
|---|
| 1958 | carbon(:,iactive,:) = carbon_stock(:,:,iactive_pool) |
|---|
| 1959 | carbon(:,islow,:) = carbon_stock(:,:,islow_pool) |
|---|
| 1960 | carbon(:,ipassive,:) = carbon_stock(:,:,ipassive_pool) |
|---|
| 1961 | |
|---|
| 1962 | ! Final step, test if all points at the local domain are at equilibrium |
|---|
| 1963 | ! The simulation can be stopped when all local domains have reached the equilibrium |
|---|
| 1964 | IF (printlev >=1) THEN |
|---|
| 1965 | IF (ALL(ok_equilibrium)) THEN |
|---|
| 1966 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon pools is reached for current local domain' |
|---|
| 1967 | ELSE |
|---|
| 1968 | WRITE(numout,*) 'Spinup analytic : Equilibrium for carbon pools is not yet reached for current local domain' |
|---|
| 1969 | END IF |
|---|
| 1970 | END IF |
|---|
| 1971 | ENDIF ! ( MOD(global_years,spinup_period) == 0) |
|---|
| 1972 | ENDIF ! (LastTsYear) |
|---|
| 1973 | |
|---|
| 1974 | ENDIF !(spinup_analytic) |
|---|
| 1975 | |
|---|
| 1976 | IF (printlev >= 4) WRITE(numout,*) 'Leaving stomate_main' |
|---|
| 1977 | |
|---|
| 1978 | END SUBROUTINE stomate_main |
|---|
| 1979 | |
|---|
| 1980 | !! ================================================================================================================================ |
|---|
| 1981 | !! SUBROUTINE : stomate_finalize |
|---|
| 1982 | !! |
|---|
| 1983 | !>\BRIEF Write variables to restart file |
|---|
| 1984 | !! |
|---|
| 1985 | !! DESCRIPTION : Write variables to restart file |
|---|
| 1986 | !! RECENT CHANGE(S) : None |
|---|
| 1987 | !! |
|---|
| 1988 | !! MAIN OUTPUT VARIABLE(S): |
|---|
| 1989 | !! |
|---|
| 1990 | !! REFERENCES : |
|---|
| 1991 | !! |
|---|
| 1992 | !! \n |
|---|
| 1993 | !_ ================================================================================================================================ |
|---|
| 1994 | |
|---|
| 1995 | SUBROUTINE stomate_finalize (kjit, kjpindex, index, clay, co2_to_bm_radia, assim_param) |
|---|
| 1996 | |
|---|
| 1997 | IMPLICIT NONE |
|---|
| 1998 | |
|---|
| 1999 | !! 0. Variable and parameter declaration |
|---|
| 2000 | !! 0.1 Input variables |
|---|
| 2001 | INTEGER(i_std),INTENT(in) :: kjit !! Time step number (unitless) |
|---|
| 2002 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 2003 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in) :: index !! Indices of the terrestrial pixels only (unitless) |
|---|
| 2004 | REAL(r_std),DIMENSION(kjpindex),INTENT(in) :: clay !! Clay fraction of soil (0-1, unitless) |
|---|
| 2005 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: co2_to_bm_radia !! virtual gpp flux between atmosphere and biosphere |
|---|
| 2006 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(in) :: assim_param !! min+max+opt temperatures (K) & vmax for photosynthesis |
|---|
| 2007 | |
|---|
| 2008 | !! 0.4 Local variables |
|---|
| 2009 | REAL(r_std) :: dt_days_read !! STOMATE time step read in restart file (days) |
|---|
| 2010 | INTEGER(i_std) :: l,k,ji, jv, i, j, m !! indices |
|---|
| 2011 | REAL(r_std),PARAMETER :: max_dt_days = 5. !! Maximum STOMATE time step (days) |
|---|
| 2012 | REAL(r_std) :: hist_days !! Writing frequency for history file (days) |
|---|
| 2013 | REAL(r_std),DIMENSION(0:nslm) :: z_soil !! Variable to store depth of the different soil layers (m) |
|---|
| 2014 | REAL(r_std),DIMENSION(kjpindex) :: cvegtot !! Total "vegetation" cover (unitless) |
|---|
| 2015 | REAL(r_std),DIMENSION(kjpindex) :: precip !! Total liquid and solid precipitation |
|---|
| 2016 | !! @tex $(??mm dt_stomate^{-1})$ @endtex |
|---|
| 2017 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_d !! Gross primary productivity per ground area |
|---|
| 2018 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 2019 | REAL(r_std),DIMENSION(kjpindex,nvm) :: gpp_daily_x !! "Daily" gpp for teststomate |
|---|
| 2020 | !! @tex $(??gC m^{-2} dt_stomate^{-1})$ @endtex |
|---|
| 2021 | REAL(r_std),DIMENSION(kjpindex,nvm) :: veget_cov !! Fractional coverage: actually share of the pixel |
|---|
| 2022 | !! covered by a PFT (fraction of ground area), |
|---|
| 2023 | !! taking into account LAI ??(= grid scale fpc)?? |
|---|
| 2024 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Maximum rate of carboxylation |
|---|
| 2025 | !! @tex $(\mumol m^{-2} s^{-1})$ @endtex |
|---|
| 2026 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_moist_inst !! Moisture control of heterotrophic respiration |
|---|
| 2027 | !! (0-1, unitless) |
|---|
| 2028 | REAL(r_std),DIMENSION(kjpindex,nlevs) :: control_temp_inst !! Temperature control of heterotrophic |
|---|
| 2029 | !! respiration, above and below (0-1, unitless) |
|---|
| 2030 | REAL(r_std),DIMENSION(kjpindex,ncarb,nvm) :: soilcarbon_input_inst !! Quantity of carbon going into carbon pools from |
|---|
| 2031 | !! litter decomposition |
|---|
| 2032 | !! @tex $(gC m^{-2} day^{-1})$ @endtex |
|---|
| 2033 | |
|---|
| 2034 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
|---|
| 2035 | REAL(r_std) :: sf_time !! Intermediate variable to calculate current time |
|---|
| 2036 | !! step |
|---|
| 2037 | INTEGER(i_std) :: max_totsize !! Memory management - maximum memory size (Mb) |
|---|
| 2038 | INTEGER(i_std) :: totsize_1step !! Memory management - memory required to store one |
|---|
| 2039 | !! time step on one processor (Mb) |
|---|
| 2040 | INTEGER(i_std) :: totsize_tmp !! Memory management - memory required to store one |
|---|
| 2041 | !! time step on all processors(Mb) |
|---|
| 2042 | REAL(r_std) :: xn !! How many times have we treated in this forcing |
|---|
| 2043 | REAL(r_std), DIMENSION(kjpindex) :: vartmp !! Temporary variable |
|---|
| 2044 | INTEGER(i_std) :: vid !! Variable identifer of netCDF (unitless) |
|---|
| 2045 | INTEGER(i_std) :: nneigh !! Number of neighbouring pixels |
|---|
| 2046 | INTEGER(i_std) :: direct !! ?? |
|---|
| 2047 | INTEGER(i_std),DIMENSION(ndm) :: d_id !! ?? |
|---|
| 2048 | REAL(r_std),DIMENSION(nbp_glo) :: clay_g !! Clay fraction of soil (0-1, unitless), parallel |
|---|
| 2049 | !! computing |
|---|
| 2050 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:,:) :: soilcarbon_input_g !! Quantity of carbon going into carbon pools from |
|---|
| 2051 | !! litter decomposition |
|---|
| 2052 | !! @tex $(gC m^{-2} dt_sechiba^{-1})$ @endtex, parallel |
|---|
| 2053 | !! computing |
|---|
| 2054 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_moist_g !! Moisture control of heterotrophic respiration |
|---|
| 2055 | !! (0-1, unitless), parallel computing |
|---|
| 2056 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:,:) :: control_temp_g !! Temperature control of heterotrophic respiration |
|---|
| 2057 | !! (0-1, unitless), parallel computing |
|---|
| 2058 | REAL(r_std),ALLOCATABLE,DIMENSION(:,:) :: npp_equil_g !! Equilibrium NPP written to forcesoil |
|---|
| 2059 | !! @tex $(gC m^{-2} year^{-1})$ @endtex, parallel |
|---|
| 2060 | !! computing |
|---|
| 2061 | |
|---|
| 2062 | REAL(r_std) :: net_cflux_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2063 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2064 | !! computing |
|---|
| 2065 | REAL(r_std) :: net_cflux_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2066 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2067 | !! computing |
|---|
| 2068 | REAL(r_std) :: net_harvest_above_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2069 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2070 | !! computing |
|---|
| 2071 | REAL(r_std) :: net_harvest_above_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2072 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2073 | !! computing |
|---|
| 2074 | REAL(r_std) :: net_biosp_prod_monthly_sum !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2075 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2076 | !! computing |
|---|
| 2077 | REAL(r_std) :: net_biosp_prod_monthly_tot !! AR5 output?? gC m2 month-1 (one variable for |
|---|
| 2078 | !! reduce_sum and one for bcast??), parallel |
|---|
| 2079 | !! computing |
|---|
| 2080 | REAL(r_std), DIMENSION(kjpindex,nvm,nbpools) :: carbon_stock !! Array containing the carbon stock for each pool |
|---|
| 2081 | !! used by ORCHIDEE |
|---|
| 2082 | |
|---|
| 2083 | !_ ================================================================================================================================ |
|---|
| 2084 | |
|---|
| 2085 | !! 1. Write restart file for stomate |
|---|
| 2086 | IF (printlev>=3) WRITE (numout,*) 'Write restart file for STOMATE' |
|---|
| 2087 | |
|---|
| 2088 | CALL writerestart & |
|---|
| 2089 | (kjpindex, index, & |
|---|
| 2090 | dt_days, days_since_beg, & |
|---|
| 2091 | ind, adapted, regenerate, & |
|---|
| 2092 | humrel_daily, gdd_init_date, litterhum_daily, & |
|---|
| 2093 | t2m_daily, t2m_min_daily, tsurf_daily, tsoil_daily, & |
|---|
| 2094 | soilhum_daily, precip_daily, & |
|---|
| 2095 | gpp_daily, npp_daily, turnover_daily, & |
|---|
| 2096 | humrel_month, humrel_week, & |
|---|
| 2097 | t2m_longterm, tau_longterm, t2m_month, t2m_week, & |
|---|
| 2098 | tsoil_month, soilhum_month, fireindex, firelitter, & |
|---|
| 2099 | maxhumrel_lastyear, maxhumrel_thisyear, & |
|---|
| 2100 | minhumrel_lastyear, minhumrel_thisyear, & |
|---|
| 2101 | maxgppweek_lastyear, maxgppweek_thisyear, & |
|---|
| 2102 | gdd0_lastyear, gdd0_thisyear, & |
|---|
| 2103 | precip_lastyear, precip_thisyear, & |
|---|
| 2104 | gdd_m5_dormance, gdd_from_growthinit, gdd_midwinter, ncd_dormance, ngd_minus5, & |
|---|
| 2105 | PFTpresent, npp_longterm, lm_lastyearmax, lm_thisyearmax, & |
|---|
| 2106 | maxfpc_lastyear, maxfpc_thisyear, & |
|---|
| 2107 | turnover_longterm, gpp_week, biomass, resp_maint_part, & |
|---|
| 2108 | leaf_age, leaf_frac, & |
|---|
| 2109 | senescence, when_growthinit, age, & |
|---|
| 2110 | resp_hetero_d, resp_maint_d, resp_growth_d, co2_fire, co2_to_bm_dgvm, co2_to_bm_radia, & |
|---|
| 2111 | veget_lastlight, everywhere, need_adjacent, & |
|---|
| 2112 | RIP_time, & |
|---|
| 2113 | time_hum_min, hum_min_dormance, & |
|---|
| 2114 | litterpart, litter, dead_leaves, & |
|---|
| 2115 | carbon, lignin_struc,turnover_time,& |
|---|
| 2116 | prod10,prod100,flux10, flux100, & |
|---|
| 2117 | convflux, cflux_prod10, cflux_prod100, & |
|---|
| 2118 | prod10_harvest,prod100_harvest,flux10_harvest, flux100_harvest, & |
|---|
| 2119 | convflux_harvest, cflux_prod10_harvest, cflux_prod100_harvest, & |
|---|
| 2120 | convfluxpft, fDeforestToProduct, fLulccResidue,fHarvestToProduct, & |
|---|
| 2121 | woodharvestpft, bm_to_litter, carb_mass_total, & |
|---|
| 2122 | Tseason, Tseason_length, Tseason_tmp, & |
|---|
| 2123 | Tmin_spring_time, begin_leaves, onset_date, & |
|---|
| 2124 | global_years, ok_equilibrium, nbp_accu, nbp_flux, & |
|---|
| 2125 | MatrixV, VectorU, previous_stock, current_stock, assim_param) |
|---|
| 2126 | |
|---|
| 2127 | !! 2. Write file with variables that force general processes in stomate |
|---|
| 2128 | IF (ok_co2 .AND. allow_forcing_write ) THEN |
|---|
| 2129 | IF ( TRIM(forcing_name) /= 'NONE' ) THEN |
|---|
| 2130 | CALL forcing_write(forcing_id,1,iisf) |
|---|
| 2131 | ! Close forcing file |
|---|
| 2132 | IF (is_root_prc) ier = NF90_CLOSE (forcing_id) |
|---|
| 2133 | forcing_id=-1 |
|---|
| 2134 | END IF |
|---|
| 2135 | END IF |
|---|
| 2136 | |
|---|
| 2137 | !! 3. Collect variables that force the soil processes in stomate |
|---|
| 2138 | IF (TRIM(Cforcing_name) /= 'NONE' ) THEN |
|---|
| 2139 | |
|---|
| 2140 | !! Collet variables |
|---|
| 2141 | IF (printlev >= 1) WRITE(numout,*) 'stomate: writing the forcing file for carbon spinup' |
|---|
| 2142 | DO iatt = 1, nparan*nbyear |
|---|
| 2143 | IF ( nforce(iatt) > 0 ) THEN |
|---|
| 2144 | soilcarbon_input(:,:,:,iatt) = & |
|---|
| 2145 | & soilcarbon_input(:,:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 2146 | control_moist(:,:,iatt) = & |
|---|
| 2147 | & control_moist(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 2148 | control_temp(:,:,iatt) = & |
|---|
| 2149 | & control_temp(:,:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 2150 | npp_equil(:,iatt) = & |
|---|
| 2151 | & npp_equil(:,iatt)/REAL(nforce(iatt),r_std) |
|---|
| 2152 | ELSE |
|---|
| 2153 | IF (printlev >= 1) THEN |
|---|
| 2154 | WRITE(numout,*) 'We have no soil carbon forcing data for this time step:', iatt |
|---|
| 2155 | WRITE(numout,*) ' -> we set them to zero' |
|---|
| 2156 | END IF |
|---|
| 2157 | soilcarbon_input(:,:,:,iatt) = zero |
|---|
| 2158 | control_moist(:,:,iatt) = zero |
|---|
| 2159 | control_temp(:,:,iatt) = zero |
|---|
| 2160 | npp_equil(:,iatt) = zero |
|---|
| 2161 | ENDIF |
|---|
| 2162 | ENDDO |
|---|
| 2163 | |
|---|
| 2164 | ! Allocate memory for parallel computing |
|---|
| 2165 | IF (is_root_prc) THEN |
|---|
| 2166 | ALLOCATE(soilcarbon_input_g(nbp_glo,ncarb,nvm,nparan*nbyear)) |
|---|
| 2167 | ALLOCATE(control_moist_g(nbp_glo,nlevs,nparan*nbyear)) |
|---|
| 2168 | ALLOCATE(control_temp_g(nbp_glo,nlevs,nparan*nbyear)) |
|---|
| 2169 | ALLOCATE(npp_equil_g(nbp_glo,nparan*nbyear)) |
|---|
| 2170 | ENDIF |
|---|
| 2171 | |
|---|
| 2172 | ! Gather distributed variables |
|---|
| 2173 | CALL gather(clay,clay_g) |
|---|
| 2174 | CALL gather(soilcarbon_input,soilcarbon_input_g) |
|---|
| 2175 | CALL gather(control_moist,control_moist_g) |
|---|
| 2176 | CALL gather(control_temp,control_temp_g) |
|---|
| 2177 | CALL gather(npp_equil,npp_equil_g) |
|---|
| 2178 | |
|---|
| 2179 | !! Create netcdf |
|---|
| 2180 | ! Create, define and populate a netcdf file containing the forcing data. |
|---|
| 2181 | ! For the root processor only (parallel computing). NF90_ are functions |
|---|
| 2182 | ! from and external library. |
|---|
| 2183 | IF (is_root_prc) THEN |
|---|
| 2184 | IF (printlev>=2) WRITE (numout,*) 'Create Cforcing file : ',TRIM(Cforcing_name) |
|---|
| 2185 | ! Create new netCDF dataset |
|---|
| 2186 | ier = NF90_CREATE (TRIM(Cforcing_name),NF90_64BIT_OFFSET ,Cforcing_id) |
|---|
| 2187 | IF (ier /= NF90_NOERR) THEN |
|---|
| 2188 | WRITE (numout,*) 'Error in creating Cforcing file : ',TRIM(Cforcing_name) |
|---|
| 2189 | CALL ipslerr_p (3,'stomate_finalize', & |
|---|
| 2190 | & 'PROBLEM creating Cforcing file', & |
|---|
| 2191 | & NF90_STRERROR(ier),'') |
|---|
| 2192 | END IF |
|---|
| 2193 | |
|---|
| 2194 | ! Add variable attribute |
|---|
| 2195 | ! Note ::nbp_glo is the number of global continental points |
|---|
| 2196 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 2197 | & 'kjpindex',REAL(nbp_glo,r_std)) |
|---|
| 2198 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 2199 | & 'nparan',REAL(nparan,r_std)) |
|---|
| 2200 | ier = NF90_PUT_ATT (Cforcing_id,NF90_GLOBAL, & |
|---|
| 2201 | & 'nbyear',REAL(nbyear,r_std)) |
|---|
| 2202 | |
|---|
| 2203 | ! Add new dimension |
|---|
| 2204 | ier = NF90_DEF_DIM (Cforcing_id,'points',nbp_glo,d_id(1)) |
|---|
| 2205 | ier = NF90_DEF_DIM (Cforcing_id,'carbtype',ncarb,d_id(2)) |
|---|
| 2206 | ier = NF90_DEF_DIM (Cforcing_id,'vegtype',nvm,d_id(3)) |
|---|
| 2207 | ier = NF90_DEF_DIM (Cforcing_id,'level',nlevs,d_id(4)) |
|---|
| 2208 | ier = NF90_DEF_DIM (Cforcing_id,'time_step',NF90_UNLIMITED,d_id(5)) |
|---|
| 2209 | |
|---|
| 2210 | ! Add new variable |
|---|
| 2211 | ier = NF90_DEF_VAR (Cforcing_id,'points', r_typ,d_id(1),vid) |
|---|
| 2212 | ier = NF90_DEF_VAR (Cforcing_id,'carbtype', r_typ,d_id(2),vid) |
|---|
| 2213 | ier = NF90_DEF_VAR (Cforcing_id,'vegtype', r_typ,d_id(3),vid) |
|---|
| 2214 | ier = NF90_DEF_VAR (Cforcing_id,'level', r_typ,d_id(4),vid) |
|---|
| 2215 | ier = NF90_DEF_VAR (Cforcing_id,'time_step', r_typ,d_id(5),vid) |
|---|
| 2216 | ier = NF90_DEF_VAR (Cforcing_id,'index', r_typ,d_id(1),vid) |
|---|
| 2217 | ier = NF90_DEF_VAR (Cforcing_id,'clay', r_typ,d_id(1),vid) |
|---|
| 2218 | ier = NF90_DEF_VAR (Cforcing_id,'soilcarbon_input',r_typ, & |
|---|
| 2219 | & (/ d_id(1),d_id(2),d_id(3),d_id(5) /),vid) |
|---|
| 2220 | ier = NF90_DEF_VAR (Cforcing_id,'control_moist',r_typ, & |
|---|
| 2221 | & (/ d_id(1),d_id(4),d_id(5) /),vid) |
|---|
| 2222 | ier = NF90_DEF_VAR (Cforcing_id,'control_temp',r_typ, & |
|---|
| 2223 | & (/ d_id(1),d_id(4),d_id(5) /),vid) |
|---|
| 2224 | ier = NF90_DEF_VAR (Cforcing_id,'npp_equil',r_typ, & |
|---|
| 2225 | & (/ d_id(1),d_id(5) /),vid) |
|---|
| 2226 | ier = NF90_ENDDEF (Cforcing_id) |
|---|
| 2227 | |
|---|
| 2228 | ! Given the name of a varaible, nf90_inq_varid finds the variable |
|---|
| 2229 | ! ID (::vid). Put data value(s) into variable ::vid |
|---|
| 2230 | ier = NF90_INQ_VARID (Cforcing_id,'points',vid) |
|---|
| 2231 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 2232 | & (/(REAL(i,r_std),i=1,nbp_glo)/)) |
|---|
| 2233 | ier = NF90_INQ_VARID (Cforcing_id,'carbtype',vid) |
|---|
| 2234 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 2235 | & (/(REAL(i,r_std),i=1,ncarb)/)) |
|---|
| 2236 | ier = NF90_INQ_VARID (Cforcing_id,'vegtype',vid) |
|---|
| 2237 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 2238 | & (/(REAL(i,r_std),i=1,nvm)/)) |
|---|
| 2239 | ier = NF90_INQ_VARID (Cforcing_id,'level',vid) |
|---|
| 2240 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 2241 | & (/(REAL(i,r_std),i=1,nlevs)/)) |
|---|
| 2242 | ier = NF90_INQ_VARID (Cforcing_id,'time_step',vid) |
|---|
| 2243 | ier = NF90_PUT_VAR (Cforcing_id,vid, & |
|---|
| 2244 | & (/(REAL(i,r_std),i=1,nparan*nbyear)/)) |
|---|
| 2245 | ier = NF90_INQ_VARID (Cforcing_id,'index',vid) |
|---|
| 2246 | ier = NF90_PUT_VAR (Cforcing_id,vid, REAL(index_g,r_std) ) |
|---|
| 2247 | ier = NF90_INQ_VARID (Cforcing_id,'clay',vid) |
|---|
| 2248 | ier = NF90_PUT_VAR (Cforcing_id,vid, clay_g ) |
|---|
| 2249 | ier = NF90_INQ_VARID (Cforcing_id,'soilcarbon_input',vid) |
|---|
| 2250 | ier = NF90_PUT_VAR (Cforcing_id,vid, soilcarbon_input_g ) |
|---|
| 2251 | ier = NF90_INQ_VARID (Cforcing_id,'control_moist',vid) |
|---|
| 2252 | ier = NF90_PUT_VAR (Cforcing_id,vid, control_moist_g ) |
|---|
| 2253 | ier = NF90_INQ_VARID (Cforcing_id,'control_temp',vid) |
|---|
| 2254 | ier = NF90_PUT_VAR (Cforcing_id,vid, control_temp_g ) |
|---|
| 2255 | ier = NF90_INQ_VARID (Cforcing_id,'npp_equil',vid) |
|---|
| 2256 | ier = NF90_PUT_VAR (Cforcing_id,vid, npp_equil_g ) |
|---|
| 2257 | |
|---|
| 2258 | ! Close netCDF |
|---|
| 2259 | ier = NF90_CLOSE (Cforcing_id) |
|---|
| 2260 | IF (ier /= NF90_NOERR) THEN |
|---|
| 2261 | CALL ipslerr_p (3,'stomate_finalize', & |
|---|
| 2262 | & 'PROBLEM in closing Cforcing file', & |
|---|
| 2263 | & NF90_STRERROR(ier),'') |
|---|
| 2264 | END IF |
|---|
| 2265 | |
|---|
| 2266 | Cforcing_id = -1 |
|---|
| 2267 | ENDIF |
|---|
| 2268 | |
|---|
| 2269 | ! Clear memory |
|---|
| 2270 | IF (is_root_prc) THEN |
|---|
| 2271 | DEALLOCATE(soilcarbon_input_g) |
|---|
| 2272 | DEALLOCATE(control_moist_g) |
|---|
| 2273 | DEALLOCATE(control_temp_g) |
|---|
| 2274 | DEALLOCATE(npp_equil_g) |
|---|
| 2275 | ENDIF |
|---|
| 2276 | |
|---|
| 2277 | ENDIF |
|---|
| 2278 | |
|---|
| 2279 | END SUBROUTINE stomate_finalize |
|---|
| 2280 | |
|---|
| 2281 | |
|---|
| 2282 | !! ================================================================================================================================ |
|---|
| 2283 | !! SUBROUTINE : stomate_init |
|---|
| 2284 | !! |
|---|
| 2285 | !>\BRIEF The routine is called only at the first simulation. At that |
|---|
| 2286 | !! time settings and flags are read and checked for internal consistency and |
|---|
| 2287 | !! memory is allocated for the variables in stomate. |
|---|
| 2288 | !! |
|---|
| 2289 | !! DESCRIPTION : The routine reads the |
|---|
| 2290 | !! following flags from the run definition file: |
|---|
| 2291 | !! -ipd (index of grid point for online diagnostics)\n |
|---|
| 2292 | !! -ok_herbivores (flag to activate herbivores)\n |
|---|
| 2293 | !! -treat_expansion (flag to activate PFT expansion across a pixel\n |
|---|
| 2294 | !! -harvest_agri (flag to harvest aboveground biomass from agricultural PFTs)\n |
|---|
| 2295 | !! \n |
|---|
| 2296 | !! Check for inconsistent setting between the following flags: |
|---|
| 2297 | !! -ok_stomate\n |
|---|
| 2298 | !! -ok_dgvm\n |
|---|
| 2299 | !! -ok_co2\n |
|---|
| 2300 | !! \n |
|---|
| 2301 | !! Memory is allocated for all the variables of stomate and new indexing tables |
|---|
| 2302 | !! are build. New indexing tables are needed because a single pixel can conatin |
|---|
| 2303 | !! several PFTs. The new indexing tables have separate indices for the different |
|---|
| 2304 | !! PFTs. Similar index tables are build for land use cover change.\n |
|---|
| 2305 | !! \n |
|---|
| 2306 | !! Several global variables and land cover change variables are initialized to |
|---|
| 2307 | !! zero.\n |
|---|
| 2308 | !! |
|---|
| 2309 | !! RECENT CHANGE(S) : None |
|---|
| 2310 | !! |
|---|
| 2311 | !! MAIN OUTPUT VARIABLE(S): Strictly speaking the subroutine has no output |
|---|
| 2312 | !! variables. However, the routine allocates memory and builds new indexing |
|---|
| 2313 | !! variables for later use.\n |
|---|
| 2314 | !! |
|---|
| 2315 | !! REFERENCE(S) : None |
|---|
| 2316 | !! |
|---|
| 2317 | !! FLOWCHART : None |
|---|
| 2318 | !! \n |
|---|
| 2319 | !_ ================================================================================================================================ |
|---|
| 2320 | |
|---|
| 2321 | SUBROUTINE stomate_init & |
|---|
| 2322 | & (kjpij, kjpindex, index, lalo, & |
|---|
| 2323 | & rest_id_stom, hist_id_stom, hist_id_stom_IPCC) |
|---|
| 2324 | |
|---|
| 2325 | !! 0. Variable and parameter declaration |
|---|
| 2326 | |
|---|
| 2327 | !! 0.1 Input variables |
|---|
| 2328 | |
|---|
| 2329 | INTEGER(i_std),INTENT(in) :: kjpij !! Total size of the un-compressed grid, including |
|---|
| 2330 | !! oceans (unitless) |
|---|
| 2331 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - number of terrestrial pixels |
|---|
| 2332 | !! (unitless) |
|---|
| 2333 | INTEGER(i_std),INTENT(in) :: rest_id_stom !! STOMATE's _Restart_ file identifier |
|---|
| 2334 | INTEGER(i_std),INTENT(in) :: hist_id_stom !! STOMATE's _history_ file identifier |
|---|
| 2335 | INTEGER(i_std),INTENT(in) :: hist_id_stom_IPCC !! STOMATE's IPCC _history_ file identifier |
|---|
| 2336 | INTEGER(i_std),DIMENSION(kjpindex),INTENT(in):: index !! Indices of the terrestrial pixels on the global |
|---|
| 2337 | !! map |
|---|
| 2338 | REAL(r_std),DIMENSION(kjpindex,2),INTENT(in) :: lalo !! Geogr. coordinates (latitude,longitude) (degrees) |
|---|
| 2339 | |
|---|
| 2340 | !! 0.2 Output variables |
|---|
| 2341 | |
|---|
| 2342 | !! 0.3 Modified variables |
|---|
| 2343 | |
|---|
| 2344 | !! 0.4 Local variables |
|---|
| 2345 | |
|---|
| 2346 | LOGICAL :: l_error !! Check errors in netcdf call |
|---|
| 2347 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 2348 | INTEGER(i_std) :: ji,j,ipd,l !! Indices |
|---|
| 2349 | !_ ================================================================================================================================ |
|---|
| 2350 | |
|---|
| 2351 | !! 1. Online diagnostics |
|---|
| 2352 | |
|---|
| 2353 | IF ( kjpindex > 0 ) THEN |
|---|
| 2354 | !Config Key = STOMATE_DIAGPT |
|---|
| 2355 | !Config Desc = Index of grid point for online diagnostics |
|---|
| 2356 | !Config If = OK_STOMATE |
|---|
| 2357 | !Config Def = 1 |
|---|
| 2358 | !Config Help = This is the index of the grid point which |
|---|
| 2359 | ! will be used for online diagnostics. |
|---|
| 2360 | !Config Units = [-] |
|---|
| 2361 | ! By default ::ipd is set to 1 |
|---|
| 2362 | ipd = 1 |
|---|
| 2363 | ! Get ::ipd from run definition file |
|---|
| 2364 | CALL getin_p('STOMATE_DIAGPT',ipd) |
|---|
| 2365 | ipd = MIN( ipd, kjpindex ) |
|---|
| 2366 | IF ( printlev >=3 ) THEN |
|---|
| 2367 | WRITE(numout,*) 'Stomate: ' |
|---|
| 2368 | WRITE(numout,*) ' Index of grid point for online diagnostics: ',ipd |
|---|
| 2369 | WRITE(numout,*) ' Lon, lat:',lalo(ipd,2),lalo(ipd,1) |
|---|
| 2370 | WRITE(numout,*) ' Index of this point on GCM grid: ',index(ipd) |
|---|
| 2371 | END IF |
|---|
| 2372 | ENDIF |
|---|
| 2373 | |
|---|
| 2374 | !! 2. Check consistency of flags |
|---|
| 2375 | |
|---|
| 2376 | IF ( ( .NOT. ok_stomate ) .AND. ok_dgvm ) THEN |
|---|
| 2377 | WRITE(numout,*) 'Cannot do dynamical vegetation without STOMATE.' |
|---|
| 2378 | WRITE(numout,*) 'Inconsistency between ::ok_stomate and ::ok_dgvm' |
|---|
| 2379 | WRITE(numout,*) 'Stop: fatal error' |
|---|
| 2380 | STOP |
|---|
| 2381 | ENDIF |
|---|
| 2382 | |
|---|
| 2383 | IF ((.NOT.ok_co2).AND.ok_stomate) THEN |
|---|
| 2384 | WRITE(numout,*) 'Cannot call STOMATE without GPP.' |
|---|
| 2385 | WRITE(numout,*) 'Inconsistency between ::ok_stomate and ::ok_co2' |
|---|
| 2386 | WRITE(numout,*) 'Stop: fatal error' |
|---|
| 2387 | STOP |
|---|
| 2388 | ENDIF |
|---|
| 2389 | |
|---|
| 2390 | !! 3. Communicate settings |
|---|
| 2391 | |
|---|
| 2392 | IF (printlev >=2) THEN |
|---|
| 2393 | WRITE(numout,*) 'stomate first call - overview of the activated flags:' |
|---|
| 2394 | WRITE(numout,*) ' Photosynthesis: ', ok_co2 |
|---|
| 2395 | WRITE(numout,*) ' STOMATE: ', ok_stomate |
|---|
| 2396 | WRITE(numout,*) ' LPJ: ', ok_dgvm |
|---|
| 2397 | END IF |
|---|
| 2398 | !! 4. Allocate memory for STOMATE's variables |
|---|
| 2399 | |
|---|
| 2400 | l_error = .FALSE. |
|---|
| 2401 | |
|---|
| 2402 | ALLOCATE(veget_cov_max(kjpindex,nvm),stat=ier) |
|---|
| 2403 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2404 | IF (l_error) THEN |
|---|
| 2405 | WRITE(numout,*) 'Memory allocation error for veget_cov_max. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2406 | STOP 'stomate_init' |
|---|
| 2407 | ENDIF |
|---|
| 2408 | |
|---|
| 2409 | ALLOCATE(ind(kjpindex,nvm),stat=ier) |
|---|
| 2410 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2411 | IF (l_error) THEN |
|---|
| 2412 | WRITE(numout,*) 'Memory allocation error for ind. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2413 | STOP 'stomate_init' |
|---|
| 2414 | ENDIF |
|---|
| 2415 | |
|---|
| 2416 | ALLOCATE(adapted(kjpindex,nvm),stat=ier) |
|---|
| 2417 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2418 | IF (l_error) THEN |
|---|
| 2419 | WRITE(numout,*) 'Memory allocation error for adapted. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2420 | STOP 'stomate_init' |
|---|
| 2421 | ENDIF |
|---|
| 2422 | |
|---|
| 2423 | ALLOCATE(regenerate(kjpindex,nvm),stat=ier) |
|---|
| 2424 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2425 | IF (l_error) THEN |
|---|
| 2426 | WRITE(numout,*) 'Memory allocation error for regenerate. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2427 | STOP 'stomate_init' |
|---|
| 2428 | ENDIF |
|---|
| 2429 | |
|---|
| 2430 | ALLOCATE(humrel_daily(kjpindex,nvm),stat=ier) |
|---|
| 2431 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2432 | IF (l_error) THEN |
|---|
| 2433 | WRITE(numout,*) 'Memory allocation error for humrel_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2434 | STOP 'stomate_init' |
|---|
| 2435 | ENDIF |
|---|
| 2436 | |
|---|
| 2437 | ALLOCATE(litterhum_daily(kjpindex),stat=ier) |
|---|
| 2438 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2439 | IF (l_error) THEN |
|---|
| 2440 | WRITE(numout,*) 'Memory allocation error for litterhum_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 2441 | STOP 'stomate_init' |
|---|
| 2442 | ENDIF |
|---|
| 2443 | |
|---|
| 2444 | ALLOCATE(t2m_daily(kjpindex),stat=ier) |
|---|
| 2445 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2446 | IF (l_error) THEN |
|---|
| 2447 | WRITE(numout,*) 'Memory allocation error for t2m_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 2448 | STOP 'stomate_init' |
|---|
| 2449 | ENDIF |
|---|
| 2450 | |
|---|
| 2451 | ALLOCATE(t2m_min_daily(kjpindex),stat=ier) |
|---|
| 2452 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2453 | IF (l_error) THEN |
|---|
| 2454 | WRITE(numout,*) 'Memory allocation error for t2m_min_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 2455 | STOP 'stomate_init' |
|---|
| 2456 | ENDIF |
|---|
| 2457 | |
|---|
| 2458 | ALLOCATE(tsurf_daily(kjpindex),stat=ier) |
|---|
| 2459 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2460 | IF (l_error) THEN |
|---|
| 2461 | WRITE(numout,*) 'Memory allocation error for tsurf_daily. We stop. We need kjpindex words',kjpindex |
|---|
| 2462 | STOP 'stomate_init' |
|---|
| 2463 | ENDIF |
|---|
| 2464 | |
|---|
| 2465 | ALLOCATE(tsoil_daily(kjpindex,nslm),stat=ier) |
|---|
| 2466 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2467 | IF (l_error) THEN |
|---|
| 2468 | WRITE(numout,*) 'Memory allocation error for tsoil_daily. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 2469 | STOP 'stomate_init' |
|---|
| 2470 | ENDIF |
|---|
| 2471 | |
|---|
| 2472 | ALLOCATE(soilhum_daily(kjpindex,nslm),stat=ier) |
|---|
| 2473 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2474 | IF (l_error) THEN |
|---|
| 2475 | WRITE(numout,*) 'Memory allocation error for soilhum_daily. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 2476 | STOP 'stomate_init' |
|---|
| 2477 | ENDIF |
|---|
| 2478 | |
|---|
| 2479 | ALLOCATE(precip_daily(kjpindex),stat=ier) |
|---|
| 2480 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2481 | IF (l_error) THEN |
|---|
| 2482 | WRITE(numout,*) 'Memory allocation error for precip_daily. We stop. We need kjpindex words',kjpindex,nvm |
|---|
| 2483 | STOP 'stomate_init' |
|---|
| 2484 | ENDIF |
|---|
| 2485 | |
|---|
| 2486 | ALLOCATE(gpp_daily(kjpindex,nvm),stat=ier) |
|---|
| 2487 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2488 | IF (l_error) THEN |
|---|
| 2489 | WRITE(numout,*) 'Memory allocation error for gpp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2490 | STOP 'stomate_init' |
|---|
| 2491 | ENDIF |
|---|
| 2492 | |
|---|
| 2493 | ALLOCATE(npp_daily(kjpindex,nvm),stat=ier) |
|---|
| 2494 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2495 | IF (l_error) THEN |
|---|
| 2496 | WRITE(numout,*) 'Memory allocation error for npp_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2497 | STOP 'stomate_init' |
|---|
| 2498 | ENDIF |
|---|
| 2499 | |
|---|
| 2500 | ALLOCATE(turnover_daily(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 2501 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2502 | IF (l_error) THEN |
|---|
| 2503 | WRITE(numout,*) 'Memory allocation error for turnover_daily. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 2504 | & kjpindex,nvm,nparts,nelements |
|---|
| 2505 | STOP 'stomate_init' |
|---|
| 2506 | ENDIF |
|---|
| 2507 | |
|---|
| 2508 | ALLOCATE(turnover_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 2509 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2510 | IF (l_error) THEN |
|---|
| 2511 | WRITE(numout,*) 'Memory allocation error for turnover_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 2512 | & kjpindex,nvm,nparts,nelements |
|---|
| 2513 | STOP 'stomate_init' |
|---|
| 2514 | ENDIF |
|---|
| 2515 | |
|---|
| 2516 | ALLOCATE(humrel_month(kjpindex,nvm),stat=ier) |
|---|
| 2517 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2518 | IF (l_error) THEN |
|---|
| 2519 | WRITE(numout,*) 'Memory allocation error for humrel_month. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2520 | STOP 'stomate_init' |
|---|
| 2521 | ENDIF |
|---|
| 2522 | |
|---|
| 2523 | ALLOCATE(humrel_week(kjpindex,nvm),stat=ier) |
|---|
| 2524 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2525 | IF (l_error) THEN |
|---|
| 2526 | WRITE(numout,*) 'Memory allocation error for humrel_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2527 | STOP 'stomate_init' |
|---|
| 2528 | ENDIF |
|---|
| 2529 | |
|---|
| 2530 | ALLOCATE(t2m_longterm(kjpindex),stat=ier) |
|---|
| 2531 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2532 | IF (l_error) THEN |
|---|
| 2533 | WRITE(numout,*) 'Memory allocation error for t2m_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2534 | STOP 'stomate_init' |
|---|
| 2535 | ENDIF |
|---|
| 2536 | |
|---|
| 2537 | ALLOCATE(t2m_month(kjpindex),stat=ier) |
|---|
| 2538 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2539 | IF (l_error) THEN |
|---|
| 2540 | WRITE(numout,*) 'Memory allocation error for t2m_month. We stop. We need kjpindex words',kjpindex |
|---|
| 2541 | STOP 'stomate_init' |
|---|
| 2542 | ENDIF |
|---|
| 2543 | |
|---|
| 2544 | ALLOCATE(Tseason(kjpindex),stat=ier) |
|---|
| 2545 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2546 | IF (l_error) THEN |
|---|
| 2547 | WRITE(numout,*) 'Memory allocation error for Tseason. We stop. We need kjpindex words',kjpindex |
|---|
| 2548 | STOP 'stomate_init' |
|---|
| 2549 | ENDIF |
|---|
| 2550 | |
|---|
| 2551 | ALLOCATE(Tseason_length(kjpindex),stat=ier) |
|---|
| 2552 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2553 | IF (l_error) THEN |
|---|
| 2554 | WRITE(numout,*) 'Memory allocation error for Tseason_length. We stop. We need kjpindex words',kjpindex |
|---|
| 2555 | STOP 'stomate_init' |
|---|
| 2556 | ENDIF |
|---|
| 2557 | |
|---|
| 2558 | ALLOCATE(Tseason_tmp(kjpindex),stat=ier) |
|---|
| 2559 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2560 | IF (l_error) THEN |
|---|
| 2561 | WRITE(numout,*) 'Memory allocation error for Tseason_tmp. We stop. We need kjpindex words',kjpindex |
|---|
| 2562 | STOP 'stomate_init' |
|---|
| 2563 | ENDIF |
|---|
| 2564 | |
|---|
| 2565 | ALLOCATE(Tmin_spring_time(kjpindex,nvm),stat=ier) |
|---|
| 2566 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2567 | IF (l_error) THEN |
|---|
| 2568 | WRITE(numout,*) 'Memory allocation error for Tmin_spring_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2569 | STOP 'stomate_init' |
|---|
| 2570 | ENDIF |
|---|
| 2571 | |
|---|
| 2572 | ALLOCATE(onset_date(kjpindex,nvm),stat=ier) |
|---|
| 2573 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2574 | IF (l_error) THEN |
|---|
| 2575 | WRITE(numout,*) 'Memory allocation error for onset_date. We stop. We need kjpindex*nvm*nparts words',kjpindex,nvm,2 |
|---|
| 2576 | STOP 'stomate_init' |
|---|
| 2577 | ENDIF |
|---|
| 2578 | |
|---|
| 2579 | ALLOCATE(t2m_week(kjpindex),stat=ier) |
|---|
| 2580 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2581 | IF (l_error) THEN |
|---|
| 2582 | WRITE(numout,*) 'Memory allocation error for t2m_week. We stop. We need kjpindex words',kjpindex |
|---|
| 2583 | STOP 'stomate_init' |
|---|
| 2584 | ENDIF |
|---|
| 2585 | |
|---|
| 2586 | ALLOCATE(tsoil_month(kjpindex,nslm),stat=ier) |
|---|
| 2587 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2588 | IF (l_error) THEN |
|---|
| 2589 | WRITE(numout,*) 'Memory allocation error for tsoil_month. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 2590 | STOP 'stomate_init' |
|---|
| 2591 | ENDIF |
|---|
| 2592 | |
|---|
| 2593 | ALLOCATE(soilhum_month(kjpindex,nslm),stat=ier) |
|---|
| 2594 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2595 | IF (l_error) THEN |
|---|
| 2596 | WRITE(numout,*) 'Memory allocation error for soilhum_month. We stop. We need kjpindex*nslm words',kjpindex,nslm |
|---|
| 2597 | STOP 'stomate_init' |
|---|
| 2598 | ENDIF |
|---|
| 2599 | |
|---|
| 2600 | ALLOCATE(fireindex(kjpindex,nvm),stat=ier) |
|---|
| 2601 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2602 | IF (l_error) THEN |
|---|
| 2603 | WRITE(numout,*) 'Memory allocation error for fireindex. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2604 | STOP 'stomate_init' |
|---|
| 2605 | ENDIF |
|---|
| 2606 | |
|---|
| 2607 | ALLOCATE(firelitter(kjpindex,nvm),stat=ier) |
|---|
| 2608 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2609 | IF (l_error) THEN |
|---|
| 2610 | WRITE(numout,*) 'Memory allocation error for firelitter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2611 | STOP 'stomate_init' |
|---|
| 2612 | ENDIF |
|---|
| 2613 | |
|---|
| 2614 | ALLOCATE(maxhumrel_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 2615 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2616 | IF (l_error) THEN |
|---|
| 2617 | WRITE(numout,*) 'Memory allocation error for maxhumrel_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2618 | STOP 'stomate_init' |
|---|
| 2619 | ENDIF |
|---|
| 2620 | |
|---|
| 2621 | ALLOCATE(maxhumrel_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 2622 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2623 | IF (l_error) THEN |
|---|
| 2624 | WRITE(numout,*) 'Memory allocation error for maxhumrel_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2625 | STOP 'stomate_init' |
|---|
| 2626 | ENDIF |
|---|
| 2627 | |
|---|
| 2628 | ALLOCATE(minhumrel_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 2629 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2630 | IF (l_error) THEN |
|---|
| 2631 | WRITE(numout,*) 'Memory allocation error for minhumrel_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2632 | STOP 'stomate_init' |
|---|
| 2633 | ENDIF |
|---|
| 2634 | |
|---|
| 2635 | ALLOCATE(minhumrel_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 2636 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2637 | IF (l_error) THEN |
|---|
| 2638 | WRITE(numout,*) 'Memory allocation error for minhumrel_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2639 | STOP 'stomate_init' |
|---|
| 2640 | ENDIF |
|---|
| 2641 | |
|---|
| 2642 | ALLOCATE(maxgppweek_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 2643 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2644 | IF (l_error) THEN |
|---|
| 2645 | WRITE(numout,*) 'Memory allocation error for maxgppweek_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2646 | STOP 'stomate_init' |
|---|
| 2647 | ENDIF |
|---|
| 2648 | |
|---|
| 2649 | ALLOCATE(maxgppweek_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 2650 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2651 | IF (l_error) THEN |
|---|
| 2652 | WRITE(numout,*) 'Memory allocation error for maxgppweek_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2653 | STOP 'stomate_init' |
|---|
| 2654 | ENDIF |
|---|
| 2655 | |
|---|
| 2656 | ALLOCATE(gdd0_lastyear(kjpindex),stat=ier) |
|---|
| 2657 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2658 | IF (l_error) THEN |
|---|
| 2659 | WRITE(numout,*) 'Memory allocation error for gdd0_lastyear. We stop. We need kjpindex words',kjpindex |
|---|
| 2660 | STOP 'stomate_init' |
|---|
| 2661 | ENDIF |
|---|
| 2662 | |
|---|
| 2663 | ALLOCATE(gdd0_thisyear(kjpindex),stat=ier) |
|---|
| 2664 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2665 | IF (l_error) THEN |
|---|
| 2666 | WRITE(numout,*) 'Memory allocation error for gdd0_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 2667 | STOP 'stomate_init' |
|---|
| 2668 | ENDIF |
|---|
| 2669 | |
|---|
| 2670 | ALLOCATE(gdd_init_date(kjpindex,2),stat=ier) |
|---|
| 2671 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2672 | IF (l_error) THEN |
|---|
| 2673 | WRITE(numout,*) 'Memory allocation error for gdd_init_date. We stop. We need kjpindex*2 words',kjpindex,2 |
|---|
| 2674 | STOP 'stomate_init' |
|---|
| 2675 | ENDIF |
|---|
| 2676 | |
|---|
| 2677 | ALLOCATE(gdd_from_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 2678 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2679 | IF (l_error) THEN |
|---|
| 2680 | WRITE(numout,*) 'Memory allocation error for gdd_from_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2681 | STOP 'stomate_init' |
|---|
| 2682 | ENDIF |
|---|
| 2683 | |
|---|
| 2684 | ALLOCATE(precip_lastyear(kjpindex),stat=ier) |
|---|
| 2685 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2686 | IF (l_error) THEN |
|---|
| 2687 | WRITE(numout,*) 'Memory allocation error for precip_lastyear. We stop. We need kjpindex*nvm words',kjpindex |
|---|
| 2688 | STOP 'stomate_init' |
|---|
| 2689 | ENDIF |
|---|
| 2690 | |
|---|
| 2691 | ALLOCATE(precip_thisyear(kjpindex),stat=ier) |
|---|
| 2692 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2693 | IF (l_error) THEN |
|---|
| 2694 | WRITE(numout,*) 'Memory allocation error for precip_thisyear. We stop. We need kjpindex words',kjpindex |
|---|
| 2695 | STOP 'stomate_init' |
|---|
| 2696 | ENDIF |
|---|
| 2697 | |
|---|
| 2698 | ALLOCATE(gdd_m5_dormance(kjpindex,nvm),stat=ier) |
|---|
| 2699 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2700 | IF (l_error) THEN |
|---|
| 2701 | WRITE(numout,*) 'Memory allocation error for gdd_m5_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2702 | STOP 'stomate_init' |
|---|
| 2703 | ENDIF |
|---|
| 2704 | |
|---|
| 2705 | ALLOCATE(gdd_midwinter(kjpindex,nvm),stat=ier) |
|---|
| 2706 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2707 | IF (l_error) THEN |
|---|
| 2708 | WRITE(numout,*) 'Memory allocation error for gdd_midwinter. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2709 | STOP 'stomate_init' |
|---|
| 2710 | ENDIF |
|---|
| 2711 | |
|---|
| 2712 | ALLOCATE(ncd_dormance(kjpindex,nvm),stat=ier) |
|---|
| 2713 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2714 | IF (l_error) THEN |
|---|
| 2715 | WRITE(numout,*) 'Memory allocation error for ncd_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2716 | STOP 'stomate_init' |
|---|
| 2717 | ENDIF |
|---|
| 2718 | |
|---|
| 2719 | ALLOCATE(ngd_minus5(kjpindex,nvm),stat=ier) |
|---|
| 2720 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2721 | IF (l_error) THEN |
|---|
| 2722 | WRITE(numout,*) 'Memory allocation error for ngd_minus5. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2723 | STOP 'stomate_init' |
|---|
| 2724 | ENDIF |
|---|
| 2725 | |
|---|
| 2726 | ALLOCATE(PFTpresent(kjpindex,nvm),stat=ier) |
|---|
| 2727 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2728 | IF (l_error) THEN |
|---|
| 2729 | WRITE(numout,*) 'Memory allocation error for PFTpresent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2730 | STOP 'stomate_init' |
|---|
| 2731 | ENDIF |
|---|
| 2732 | |
|---|
| 2733 | ALLOCATE(npp_longterm(kjpindex,nvm),stat=ier) |
|---|
| 2734 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2735 | IF (l_error) THEN |
|---|
| 2736 | WRITE(numout,*) 'Memory allocation error for npp_longterm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2737 | STOP 'stomate_init' |
|---|
| 2738 | ENDIF |
|---|
| 2739 | |
|---|
| 2740 | ALLOCATE(lm_lastyearmax(kjpindex,nvm),stat=ier) |
|---|
| 2741 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2742 | IF (l_error) THEN |
|---|
| 2743 | WRITE(numout,*) 'Memory allocation error for lm_lastyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2744 | STOP 'stomate_init' |
|---|
| 2745 | ENDIF |
|---|
| 2746 | |
|---|
| 2747 | ALLOCATE(lm_thisyearmax(kjpindex,nvm),stat=ier) |
|---|
| 2748 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2749 | IF (l_error) THEN |
|---|
| 2750 | WRITE(numout,*) 'Memory allocation error for lm_thisyearmax. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2751 | STOP 'stomate_init' |
|---|
| 2752 | ENDIF |
|---|
| 2753 | |
|---|
| 2754 | ALLOCATE(maxfpc_lastyear(kjpindex,nvm),stat=ier) |
|---|
| 2755 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2756 | IF (l_error) THEN |
|---|
| 2757 | WRITE(numout,*) 'Memory allocation error for maxfpc_lastyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2758 | STOP 'stomate_init' |
|---|
| 2759 | ENDIF |
|---|
| 2760 | |
|---|
| 2761 | ALLOCATE(maxfpc_thisyear(kjpindex,nvm),stat=ier) |
|---|
| 2762 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2763 | IF (l_error) THEN |
|---|
| 2764 | WRITE(numout,*) 'Memory allocation error for maxfpc_thisyear. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2765 | STOP 'stomate_init' |
|---|
| 2766 | ENDIF |
|---|
| 2767 | |
|---|
| 2768 | ALLOCATE(turnover_longterm(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 2769 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2770 | IF (l_error) THEN |
|---|
| 2771 | WRITE(numout,*) 'Memory allocation error for turnover_longterm. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 2772 | & kjpindex,nvm,nparts,nelements |
|---|
| 2773 | STOP 'stomate_init' |
|---|
| 2774 | ENDIF |
|---|
| 2775 | |
|---|
| 2776 | ALLOCATE(gpp_week(kjpindex,nvm),stat=ier) |
|---|
| 2777 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2778 | IF (l_error) THEN |
|---|
| 2779 | WRITE(numout,*) 'Memory allocation error for gpp_week. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2780 | STOP 'stomate_init' |
|---|
| 2781 | ENDIF |
|---|
| 2782 | |
|---|
| 2783 | ALLOCATE(biomass(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 2784 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2785 | IF (l_error) THEN |
|---|
| 2786 | WRITE(numout,*) 'Memory allocation error for biomass. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 2787 | & kjpindex,nvm,nparts,nelements |
|---|
| 2788 | STOP 'stomate_init' |
|---|
| 2789 | ENDIF |
|---|
| 2790 | |
|---|
| 2791 | ALLOCATE(senescence(kjpindex,nvm),stat=ier) |
|---|
| 2792 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2793 | IF (l_error) THEN |
|---|
| 2794 | WRITE(numout,*) 'Memory allocation error for senescence. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2795 | STOP 'stomate_init' |
|---|
| 2796 | ENDIF |
|---|
| 2797 | |
|---|
| 2798 | ALLOCATE(begin_leaves(kjpindex,nvm),stat=ier) |
|---|
| 2799 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2800 | IF (l_error) THEN |
|---|
| 2801 | WRITE(numout,*) 'Memory allocation error for begin_leaves. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2802 | STOP 'stomate_init' |
|---|
| 2803 | ENDIF |
|---|
| 2804 | |
|---|
| 2805 | ALLOCATE(when_growthinit(kjpindex,nvm),stat=ier) |
|---|
| 2806 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2807 | IF (l_error) THEN |
|---|
| 2808 | WRITE(numout,*) 'Memory allocation error for when_growthinit. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2809 | STOP 'stomate_init' |
|---|
| 2810 | ENDIF |
|---|
| 2811 | |
|---|
| 2812 | ALLOCATE(age(kjpindex,nvm),stat=ier) |
|---|
| 2813 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2814 | IF (l_error) THEN |
|---|
| 2815 | WRITE(numout,*) 'Memory allocation error for age. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2816 | STOP 'stomate_init' |
|---|
| 2817 | ENDIF |
|---|
| 2818 | |
|---|
| 2819 | ALLOCATE(resp_hetero_d(kjpindex,nvm),stat=ier) |
|---|
| 2820 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2821 | IF (l_error) THEN |
|---|
| 2822 | WRITE(numout,*) 'Memory allocation error for resp_hetero_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2823 | STOP 'stomate_init' |
|---|
| 2824 | ENDIF |
|---|
| 2825 | |
|---|
| 2826 | ALLOCATE(resp_hetero_radia(kjpindex,nvm),stat=ier) |
|---|
| 2827 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2828 | IF (l_error) THEN |
|---|
| 2829 | WRITE(numout,*) 'Memory allocation error for resp_hetero_radia. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2830 | STOP 'stomate_init' |
|---|
| 2831 | ENDIF |
|---|
| 2832 | |
|---|
| 2833 | ALLOCATE(resp_maint_d(kjpindex,nvm),stat=ier) |
|---|
| 2834 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2835 | IF (l_error) THEN |
|---|
| 2836 | WRITE(numout,*) 'Memory allocation error for resp_maint_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2837 | STOP 'stomate_init' |
|---|
| 2838 | ENDIF |
|---|
| 2839 | |
|---|
| 2840 | ALLOCATE(resp_growth_d(kjpindex,nvm),stat=ier) |
|---|
| 2841 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2842 | IF (l_error) THEN |
|---|
| 2843 | WRITE(numout,*) 'Memory allocation error for resp_growth_d. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2844 | STOP 'stomate_init' |
|---|
| 2845 | ENDIF |
|---|
| 2846 | |
|---|
| 2847 | ALLOCATE(co2_fire(kjpindex,nvm),stat=ier) |
|---|
| 2848 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2849 | IF (l_error) THEN |
|---|
| 2850 | WRITE(numout,*) 'Memory allocation error for co2_fire. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2851 | STOP 'stomate_init' |
|---|
| 2852 | ENDIF |
|---|
| 2853 | |
|---|
| 2854 | ALLOCATE(co2_to_bm_dgvm(kjpindex,nvm),stat=ier) |
|---|
| 2855 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2856 | IF (l_error) THEN |
|---|
| 2857 | WRITE(numout,*) 'Memory allocation error for co2_to_bm_dgvm. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2858 | STOP 'stomate_init' |
|---|
| 2859 | ENDIF |
|---|
| 2860 | |
|---|
| 2861 | ALLOCATE(veget_lastlight(kjpindex,nvm),stat=ier) |
|---|
| 2862 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2863 | IF (l_error) THEN |
|---|
| 2864 | WRITE(numout,*) 'Memory allocation error for veget_lastlight. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2865 | STOP 'stomate_init' |
|---|
| 2866 | ENDIF |
|---|
| 2867 | |
|---|
| 2868 | ALLOCATE(everywhere(kjpindex,nvm),stat=ier) |
|---|
| 2869 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2870 | IF (l_error) THEN |
|---|
| 2871 | WRITE(numout,*) 'Memory allocation error for everywhere. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2872 | STOP 'stomate_init' |
|---|
| 2873 | ENDIF |
|---|
| 2874 | |
|---|
| 2875 | ALLOCATE(need_adjacent(kjpindex,nvm),stat=ier) |
|---|
| 2876 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2877 | IF (l_error) THEN |
|---|
| 2878 | WRITE(numout,*) 'Memory allocation error for need_adjacent. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2879 | STOP 'stomate_init' |
|---|
| 2880 | ENDIF |
|---|
| 2881 | |
|---|
| 2882 | ALLOCATE(leaf_age(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 2883 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2884 | IF (l_error) THEN |
|---|
| 2885 | WRITE(numout,*) 'Memory allocation error for leaf_age. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 2886 | & kjpindex,nvm,nleafages |
|---|
| 2887 | STOP 'stomate_init' |
|---|
| 2888 | ENDIF |
|---|
| 2889 | |
|---|
| 2890 | ALLOCATE(leaf_frac(kjpindex,nvm,nleafages),stat=ier) |
|---|
| 2891 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2892 | IF (l_error) THEN |
|---|
| 2893 | WRITE(numout,*) 'Memory allocation error for leaf_frac. We stop. We need kjpindex*nvm*nleafages words', & |
|---|
| 2894 | & kjpindex,nvm,nleafages |
|---|
| 2895 | STOP 'stomate_init' |
|---|
| 2896 | ENDIF |
|---|
| 2897 | |
|---|
| 2898 | ALLOCATE(RIP_time(kjpindex,nvm),stat=ier) |
|---|
| 2899 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2900 | IF (l_error) THEN |
|---|
| 2901 | WRITE(numout,*) 'Memory allocation error for RIP_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2902 | STOP 'stomate_init' |
|---|
| 2903 | ENDIF |
|---|
| 2904 | |
|---|
| 2905 | ALLOCATE(time_hum_min(kjpindex,nvm),stat=ier) |
|---|
| 2906 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2907 | IF (l_error) THEN |
|---|
| 2908 | WRITE(numout,*) 'Memory allocation error for time_hum_min. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2909 | STOP 'stomate_init' |
|---|
| 2910 | ENDIF |
|---|
| 2911 | |
|---|
| 2912 | ALLOCATE(hum_min_dormance(kjpindex,nvm),stat=ier) |
|---|
| 2913 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2914 | IF (l_error) THEN |
|---|
| 2915 | WRITE(numout,*) 'Memory allocation error for hum_min_dormance. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2916 | STOP 'stomate_init' |
|---|
| 2917 | ENDIF |
|---|
| 2918 | |
|---|
| 2919 | ALLOCATE(litterpart(kjpindex,nvm,nlitt),stat=ier) |
|---|
| 2920 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2921 | IF (l_error) THEN |
|---|
| 2922 | WRITE(numout,*) 'Memory allocation error for litterpart. We stop. We need kjpindex*nvm*nlitt words', & |
|---|
| 2923 | & kjpindex,nvm,nlitt |
|---|
| 2924 | STOP 'stomate_init' |
|---|
| 2925 | ENDIF |
|---|
| 2926 | |
|---|
| 2927 | ALLOCATE(litter(kjpindex,nlitt,nvm,nlevs,nelements),stat=ier) |
|---|
| 2928 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2929 | IF (l_error) THEN |
|---|
| 2930 | WRITE(numout,*) 'Memory allocation error for litter. We stop. We need kjpindex*nlitt*nvm*nlevs*nelements words', & |
|---|
| 2931 | & kjpindex,nlitt,nvm,nlevs,nelements |
|---|
| 2932 | STOP 'stomate_init' |
|---|
| 2933 | ENDIF |
|---|
| 2934 | |
|---|
| 2935 | ALLOCATE(dead_leaves(kjpindex,nvm,nlitt),stat=ier) |
|---|
| 2936 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2937 | IF (l_error) THEN |
|---|
| 2938 | WRITE(numout,*) 'Memory allocation error for dead_leaves. We stop. We need kjpindex*nvm*nlitt words', & |
|---|
| 2939 | & kjpindex,nvm,nlitt |
|---|
| 2940 | STOP 'stomate_init' |
|---|
| 2941 | ENDIF |
|---|
| 2942 | |
|---|
| 2943 | ALLOCATE(carbon(kjpindex,ncarb,nvm),stat=ier) |
|---|
| 2944 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2945 | IF (l_error) THEN |
|---|
| 2946 | WRITE(numout,*) 'Memory allocation error for carbon. We stop. We need kjpindex*ncarb*nvm words',kjpindex,ncarb,nvm |
|---|
| 2947 | STOP 'stomate_init' |
|---|
| 2948 | ENDIF |
|---|
| 2949 | |
|---|
| 2950 | ALLOCATE(lignin_struc(kjpindex,nvm,nlevs),stat=ier) |
|---|
| 2951 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2952 | IF (l_error) THEN |
|---|
| 2953 | WRITE(numout,*) 'Memory allocation error for lignin_struc. We stop. We need kjpindex*nvm*nlevs words',kjpindex,nvm,nlevs |
|---|
| 2954 | STOP 'stomate_init' |
|---|
| 2955 | ENDIF |
|---|
| 2956 | |
|---|
| 2957 | ALLOCATE(turnover_time(kjpindex,nvm),stat=ier) |
|---|
| 2958 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2959 | IF (l_error) THEN |
|---|
| 2960 | WRITE(numout,*) 'Memory allocation error for turnover_time. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2961 | STOP 'stomate_init' |
|---|
| 2962 | ENDIF |
|---|
| 2963 | |
|---|
| 2964 | ALLOCATE(nep_daily(kjpindex,nvm),stat=ier) |
|---|
| 2965 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2966 | IF (l_error) THEN |
|---|
| 2967 | WRITE(numout,*) 'Memory allocation error for nep_daily. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2968 | STOP 'stomate_init' |
|---|
| 2969 | ENDIF |
|---|
| 2970 | |
|---|
| 2971 | ALLOCATE(nep_monthly(kjpindex,nvm),stat=ier) |
|---|
| 2972 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2973 | IF (l_error) THEN |
|---|
| 2974 | WRITE(numout,*) 'Memory allocation error for nep_monthly. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 2975 | STOP 'stomate_init' |
|---|
| 2976 | ENDIF |
|---|
| 2977 | |
|---|
| 2978 | ALLOCATE (cflux_prod_monthly(kjpindex), stat=ier) |
|---|
| 2979 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2980 | IF (l_error) THEN |
|---|
| 2981 | WRITE(numout,*) 'Memory allocation error for cflux_prod_monthly. We stop. We need kjpindex words',kjpindex |
|---|
| 2982 | STOP 'stomate_init' |
|---|
| 2983 | ENDIF |
|---|
| 2984 | |
|---|
| 2985 | ALLOCATE (harvest_above_monthly(kjpindex), stat=ier) |
|---|
| 2986 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2987 | IF (l_error) THEN |
|---|
| 2988 | WRITE(numout,*) 'Memory allocation error for harvest_above_monthly. We stop. We need kjpindex words',kjpindex |
|---|
| 2989 | STOP 'stomate_init' |
|---|
| 2990 | ENDIF |
|---|
| 2991 | |
|---|
| 2992 | ALLOCATE(bm_to_litter(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 2993 | l_error = l_error .OR. (ier /= 0) |
|---|
| 2994 | IF (l_error) THEN |
|---|
| 2995 | WRITE(numout,*) 'Memory allocation error for bm_to_litter. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 2996 | & kjpindex,nvm,nparts,nelements |
|---|
| 2997 | STOP 'stomate_init' |
|---|
| 2998 | ENDIF |
|---|
| 2999 | |
|---|
| 3000 | ALLOCATE(bm_to_littercalc(kjpindex,nvm,nparts,nelements),stat=ier) |
|---|
| 3001 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3002 | IF (l_error) THEN |
|---|
| 3003 | WRITE(numout,*) 'Memory allocation error for bm_to_littercalc. We stop. We need kjpindex*nvm*nparts*nelements words', & |
|---|
| 3004 | & kjpindex,nvm,nparts,nelements |
|---|
| 3005 | STOP 'stomate_init' |
|---|
| 3006 | ENDIF |
|---|
| 3007 | |
|---|
| 3008 | ALLOCATE(herbivores(kjpindex,nvm),stat=ier) |
|---|
| 3009 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3010 | IF (l_error) THEN |
|---|
| 3011 | WRITE(numout,*) 'Memory allocation error for herbivores. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3012 | STOP 'stomate_init' |
|---|
| 3013 | ENDIF |
|---|
| 3014 | |
|---|
| 3015 | ALLOCATE(hori_index(kjpindex),stat=ier) |
|---|
| 3016 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3017 | IF (l_error) THEN |
|---|
| 3018 | WRITE(numout,*) 'Memory allocation error for hori_index. We stop. We need kjpindex words',kjpindex |
|---|
| 3019 | STOP 'stomate_init' |
|---|
| 3020 | ENDIF |
|---|
| 3021 | |
|---|
| 3022 | ALLOCATE(horipft_index(kjpindex*nvm),stat=ier) |
|---|
| 3023 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3024 | IF (l_error) THEN |
|---|
| 3025 | WRITE(numout,*) 'Memory allocation error for horipft_index. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3026 | STOP 'stomate_init' |
|---|
| 3027 | ENDIF |
|---|
| 3028 | |
|---|
| 3029 | ALLOCATE(resp_maint_part_radia(kjpindex,nvm,nparts),stat=ier) |
|---|
| 3030 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3031 | IF (l_error) THEN |
|---|
| 3032 | WRITE(numout,*) 'Memory allocation error for resp_maint_part_radia. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 3033 | & kjpindex,nvm,nparts |
|---|
| 3034 | STOP 'stomate_init' |
|---|
| 3035 | ENDIF |
|---|
| 3036 | |
|---|
| 3037 | ALLOCATE(resp_maint_radia(kjpindex,nvm),stat=ier) |
|---|
| 3038 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3039 | IF (l_error) THEN |
|---|
| 3040 | WRITE(numout,*) 'Memory allocation error for resp_maint_radia. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3041 | STOP 'stomate_init' |
|---|
| 3042 | ENDIF |
|---|
| 3043 | |
|---|
| 3044 | ALLOCATE(resp_maint_part(kjpindex,nvm,nparts),stat=ier) |
|---|
| 3045 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3046 | IF (l_error) THEN |
|---|
| 3047 | WRITE(numout,*) 'Memory allocation error for resp_maint_part. We stop. We need kjpindex*nvm*nparts words', & |
|---|
| 3048 | & kjpindex,nvm,nparts |
|---|
| 3049 | STOP 'stomate_init' |
|---|
| 3050 | ENDIF |
|---|
| 3051 | resp_maint_part(:,:,:) = zero |
|---|
| 3052 | |
|---|
| 3053 | ALLOCATE (horip10_index(kjpindex*10), stat=ier) |
|---|
| 3054 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3055 | IF (l_error) THEN |
|---|
| 3056 | WRITE(numout,*) 'Memory allocation error for horip10_index. We stop. We need kjpindex*10 words',kjpindex,10 |
|---|
| 3057 | STOP 'stomate_init' |
|---|
| 3058 | ENDIF |
|---|
| 3059 | |
|---|
| 3060 | ALLOCATE (horip100_index(kjpindex*100), stat=ier) |
|---|
| 3061 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3062 | IF (l_error) THEN |
|---|
| 3063 | WRITE(numout,*) 'Memory allocation error for horip100_index. We stop. We need kjpindex*100 words',kjpindex,100 |
|---|
| 3064 | STOP 'stomate_init' |
|---|
| 3065 | ENDIF |
|---|
| 3066 | |
|---|
| 3067 | ALLOCATE (horip11_index(kjpindex*11), stat=ier) |
|---|
| 3068 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3069 | IF (l_error) THEN |
|---|
| 3070 | WRITE(numout,*) 'Memory allocation error for horip11_index. We stop. We need kjpindex*11 words',kjpindex,11 |
|---|
| 3071 | STOP 'stomate_init' |
|---|
| 3072 | ENDIF |
|---|
| 3073 | |
|---|
| 3074 | ALLOCATE (horip101_index(kjpindex*101), stat=ier) |
|---|
| 3075 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3076 | IF (l_error) THEN |
|---|
| 3077 | WRITE(numout,*) 'Memory allocation error for horip101_index. We stop. We need kjpindex*101 words',kjpindex,101 |
|---|
| 3078 | STOP 'stomate_init' |
|---|
| 3079 | ENDIF |
|---|
| 3080 | |
|---|
| 3081 | ALLOCATE (prod10(kjpindex,0:10), stat=ier) |
|---|
| 3082 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3083 | IF (l_error) THEN |
|---|
| 3084 | WRITE(numout,*) 'Memory allocation error for prod10. We stop. We need kjpindex*11 words',kjpindex,11 |
|---|
| 3085 | STOP 'stomate_init' |
|---|
| 3086 | ENDIF |
|---|
| 3087 | |
|---|
| 3088 | ALLOCATE (prod100(kjpindex,0:100), stat=ier) |
|---|
| 3089 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3090 | IF (l_error) THEN |
|---|
| 3091 | WRITE(numout,*) 'Memory allocation error for prod100. We stop. We need kjpindex*101 words',kjpindex,101 |
|---|
| 3092 | STOP 'stomate_init' |
|---|
| 3093 | ENDIF |
|---|
| 3094 | |
|---|
| 3095 | ALLOCATE (flux10(kjpindex,10), stat=ier) |
|---|
| 3096 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3097 | IF (l_error) THEN |
|---|
| 3098 | WRITE(numout,*) 'Memory allocation error for flux10. We stop. We need kjpindex*10 words',kjpindex,10 |
|---|
| 3099 | STOP 'stomate_init' |
|---|
| 3100 | ENDIF |
|---|
| 3101 | |
|---|
| 3102 | ALLOCATE (flux100(kjpindex,100), stat=ier) |
|---|
| 3103 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3104 | IF (l_error) THEN |
|---|
| 3105 | WRITE(numout,*) 'Memory allocation error for flux100. We stop. We need kjpindex*100 words',kjpindex,100 |
|---|
| 3106 | STOP 'stomate_init' |
|---|
| 3107 | ENDIF |
|---|
| 3108 | |
|---|
| 3109 | ALLOCATE (convflux(kjpindex), stat=ier) |
|---|
| 3110 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3111 | IF (l_error) THEN |
|---|
| 3112 | WRITE(numout,*) 'Memory allocation error for convflux. We stop. We need kjpindex words',kjpindex |
|---|
| 3113 | STOP 'stomate_init' |
|---|
| 3114 | ENDIF |
|---|
| 3115 | |
|---|
| 3116 | ALLOCATE (cflux_prod10(kjpindex), stat=ier) |
|---|
| 3117 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3118 | IF (l_error) THEN |
|---|
| 3119 | WRITE(numout,*) 'Memory allocation error for cflux_prod10. We stop. We need kjpindex words',kjpindex |
|---|
| 3120 | STOP 'stomate_init' |
|---|
| 3121 | ENDIF |
|---|
| 3122 | |
|---|
| 3123 | ALLOCATE (cflux_prod100(kjpindex), stat=ier) |
|---|
| 3124 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3125 | IF (l_error) THEN |
|---|
| 3126 | WRITE(numout,*) 'Memory allocation error for cflux_prod100. We stop. We need kjpindex words',kjpindex |
|---|
| 3127 | STOP 'stomate_init' |
|---|
| 3128 | ENDIF |
|---|
| 3129 | |
|---|
| 3130 | ALLOCATE (prod10_harvest(kjpindex,0:10), stat=ier) |
|---|
| 3131 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3132 | IF (l_error) THEN |
|---|
| 3133 | WRITE(numout,*) 'Memory allocation error for prod10_harvest. We stop. We need kjpindex*11 words',kjpindex,11 |
|---|
| 3134 | STOP 'stomate_init' |
|---|
| 3135 | ENDIF |
|---|
| 3136 | |
|---|
| 3137 | ALLOCATE (prod100_harvest(kjpindex,0:100), stat=ier) |
|---|
| 3138 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3139 | IF (l_error) THEN |
|---|
| 3140 | WRITE(numout,*) 'Memory allocation error for prod100_harvest. We stop. We need kjpindex*101 words',kjpindex,101 |
|---|
| 3141 | STOP 'stomate_init' |
|---|
| 3142 | ENDIF |
|---|
| 3143 | |
|---|
| 3144 | ALLOCATE (flux10_harvest(kjpindex,10), stat=ier) |
|---|
| 3145 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3146 | IF (l_error) THEN |
|---|
| 3147 | WRITE(numout,*) 'Memory allocation error for flux10_harvest. We stop. We need kjpindex*10 words',kjpindex,10 |
|---|
| 3148 | STOP 'stomate_init' |
|---|
| 3149 | ENDIF |
|---|
| 3150 | |
|---|
| 3151 | ALLOCATE (flux100_harvest(kjpindex,100), stat=ier) |
|---|
| 3152 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3153 | IF (l_error) THEN |
|---|
| 3154 | WRITE(numout,*) 'Memory allocation error for flux100_harvest. We stop. We need kjpindex*100 words',kjpindex,100 |
|---|
| 3155 | STOP 'stomate_init' |
|---|
| 3156 | ENDIF |
|---|
| 3157 | |
|---|
| 3158 | ALLOCATE (convflux_harvest(kjpindex), stat=ier) |
|---|
| 3159 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3160 | IF (l_error) THEN |
|---|
| 3161 | WRITE(numout,*) 'Memory allocation error for convflux_harvest. We stop. We need kjpindex words',kjpindex |
|---|
| 3162 | STOP 'stomate_init' |
|---|
| 3163 | ENDIF |
|---|
| 3164 | |
|---|
| 3165 | ALLOCATE (cflux_prod10_harvest(kjpindex), stat=ier) |
|---|
| 3166 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3167 | IF (l_error) THEN |
|---|
| 3168 | WRITE(numout,*) 'Memory allocation error for cflux_prod10_harvest. We stop. We need kjpindex words',kjpindex |
|---|
| 3169 | STOP 'stomate_init' |
|---|
| 3170 | ENDIF |
|---|
| 3171 | |
|---|
| 3172 | ALLOCATE (cflux_prod100_harvest(kjpindex), stat=ier) |
|---|
| 3173 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3174 | IF (l_error) THEN |
|---|
| 3175 | WRITE(numout,*) 'Memory allocation error for cflux_prod100_harvest. We stop. We need kjpindex words',kjpindex |
|---|
| 3176 | STOP 'stomate_init' |
|---|
| 3177 | ENDIF |
|---|
| 3178 | |
|---|
| 3179 | ALLOCATE (woodharvestpft(kjpindex,nvm), stat=ier) |
|---|
| 3180 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3181 | IF (l_error) THEN |
|---|
| 3182 | WRITE(numout,*) 'Memory allocation error for woodharvestpft. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3183 | STOP 'stomate_init' |
|---|
| 3184 | ENDIF |
|---|
| 3185 | |
|---|
| 3186 | ALLOCATE (convfluxpft(kjpindex,nvm), stat=ier) |
|---|
| 3187 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3188 | IF (l_error) THEN |
|---|
| 3189 | WRITE(numout,*) 'Memory allocation error for convfluxpft. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3190 | STOP 'stomate_init' |
|---|
| 3191 | ENDIF |
|---|
| 3192 | |
|---|
| 3193 | ALLOCATE (fDeforestToProduct(kjpindex,nvm), stat=ier) |
|---|
| 3194 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3195 | IF (l_error) THEN |
|---|
| 3196 | WRITE(numout,*) 'Memory allocation error for fDeforestToProduct. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3197 | STOP 'stomate_init' |
|---|
| 3198 | ENDIF |
|---|
| 3199 | |
|---|
| 3200 | ALLOCATE (fLulccResidue(kjpindex,nvm), stat=ier) |
|---|
| 3201 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3202 | IF (l_error) THEN |
|---|
| 3203 | WRITE(numout,*) 'Memory allocation error for fLulccResidue. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3204 | STOP 'stomate_init' |
|---|
| 3205 | ENDIF |
|---|
| 3206 | |
|---|
| 3207 | ALLOCATE (fHarvestToProduct(kjpindex,nvm), stat=ier) |
|---|
| 3208 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3209 | IF (l_error) THEN |
|---|
| 3210 | WRITE(numout,*) 'Memory allocation error for fHarvestToProduct. We stop. We need kjpindex*nvm words',kjpindex*nvm |
|---|
| 3211 | STOP 'stomate_init' |
|---|
| 3212 | ENDIF |
|---|
| 3213 | |
|---|
| 3214 | ALLOCATE (harvest_above(kjpindex), stat=ier) |
|---|
| 3215 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3216 | IF (l_error) THEN |
|---|
| 3217 | WRITE(numout,*) 'Memory allocation error for harvest_above. We stop. We need kjpindex words',kjpindex |
|---|
| 3218 | STOP 'stomate_init' |
|---|
| 3219 | ENDIF |
|---|
| 3220 | |
|---|
| 3221 | ALLOCATE (carb_mass_total(kjpindex), stat=ier) |
|---|
| 3222 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3223 | IF (l_error) THEN |
|---|
| 3224 | WRITE(numout,*) 'Memory allocation error for carb_mass_total. We stop. We need kjpindex words',kjpindex |
|---|
| 3225 | STOP 'stomate_init' |
|---|
| 3226 | ENDIF |
|---|
| 3227 | |
|---|
| 3228 | ALLOCATE (soilcarbon_input_daily(kjpindex,ncarb,nvm), stat=ier) |
|---|
| 3229 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3230 | IF (l_error) THEN |
|---|
| 3231 | WRITE(numout,*) 'Memory allocation error for soilcarbon_input_daily. We stop. We need kjpindex*ncarb*nvm words', & |
|---|
| 3232 | & kjpindex,ncarb,nvm |
|---|
| 3233 | STOP 'stomate_init' |
|---|
| 3234 | ENDIF |
|---|
| 3235 | |
|---|
| 3236 | ALLOCATE (control_temp_daily(kjpindex,nlevs), stat=ier) |
|---|
| 3237 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3238 | IF (l_error) THEN |
|---|
| 3239 | WRITE(numout,*) 'Memory allocation error for control_temp_daily. We stop. We need kjpindex*nlevs words',kjpindex,nlevs |
|---|
| 3240 | STOP 'stomate_init' |
|---|
| 3241 | ENDIF |
|---|
| 3242 | |
|---|
| 3243 | ALLOCATE (control_moist_daily(kjpindex,nlevs), stat=ier) |
|---|
| 3244 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3245 | IF (l_error) THEN |
|---|
| 3246 | WRITE(numout,*) 'Memory allocation error for control_moist_daily. We stop. We need kjpindex*nlevs words',kjpindex,nlevs |
|---|
| 3247 | STOP 'stomate_init' |
|---|
| 3248 | ENDIF |
|---|
| 3249 | |
|---|
| 3250 | ALLOCATE (fpc_max(kjpindex,nvm), stat=ier) |
|---|
| 3251 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3252 | IF (l_error) THEN |
|---|
| 3253 | WRITE(numout,*) 'Memory allocation error for fpc_max. We stop. We need kjpindex*nvm words',kjpindex,nvm |
|---|
| 3254 | STOP 'stomate_init' |
|---|
| 3255 | ENDIF |
|---|
| 3256 | |
|---|
| 3257 | ALLOCATE(ok_equilibrium(kjpindex),stat=ier) |
|---|
| 3258 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3259 | IF (l_error) THEN |
|---|
| 3260 | WRITE(numout,*) 'Memory allocation error for ok_equilibrium. We stop. We need kjpindex words',kjpindex |
|---|
| 3261 | STOP 'stomate_init' |
|---|
| 3262 | ENDIF |
|---|
| 3263 | |
|---|
| 3264 | ALLOCATE(carbon_eq(kjpindex),stat=ier) |
|---|
| 3265 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3266 | IF (l_error) THEN |
|---|
| 3267 | WRITE(numout,*) 'Memory allocation error for carbon_eq. We stop. We need kjpindex words',kjpindex |
|---|
| 3268 | STOP 'stomate_init' |
|---|
| 3269 | ENDIF |
|---|
| 3270 | |
|---|
| 3271 | ALLOCATE(nbp_accu(kjpindex),stat=ier) |
|---|
| 3272 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3273 | IF (l_error) THEN |
|---|
| 3274 | WRITE(numout,*) 'Memory allocation error for nbp_accu. We stop. We need kjpindex words',kjpindex |
|---|
| 3275 | STOP 'stomate_init' |
|---|
| 3276 | ENDIF |
|---|
| 3277 | |
|---|
| 3278 | ALLOCATE(nbp_flux(kjpindex),stat=ier) |
|---|
| 3279 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3280 | IF (l_error) THEN |
|---|
| 3281 | WRITE(numout,*) 'Memory allocation error for nbp_flux. We stop. We need kjpindex words',kjpindex |
|---|
| 3282 | STOP 'stomate_init' |
|---|
| 3283 | ENDIF |
|---|
| 3284 | |
|---|
| 3285 | ALLOCATE(matrixA(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 3286 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3287 | IF (l_error) THEN |
|---|
| 3288 | WRITE(numout,*) 'Memory allocation error for matrixA. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 3289 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 3290 | STOP 'stomate_init' |
|---|
| 3291 | ENDIF |
|---|
| 3292 | |
|---|
| 3293 | ALLOCATE(vectorB(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 3294 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3295 | IF (l_error) THEN |
|---|
| 3296 | WRITE(numout,*) 'Memory allocation error for vectorB. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 3297 | & kjpindex, nvm, nbpools |
|---|
| 3298 | STOP 'stomate_init' |
|---|
| 3299 | ENDIF |
|---|
| 3300 | |
|---|
| 3301 | ALLOCATE(VectorU(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 3302 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3303 | IF (l_error) THEN |
|---|
| 3304 | WRITE(numout,*) 'Memory allocation error for VectorU. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 3305 | & kjpindex, nvm, nbpools |
|---|
| 3306 | STOP 'stomate_init' |
|---|
| 3307 | ENDIF |
|---|
| 3308 | |
|---|
| 3309 | ALLOCATE(MatrixV(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 3310 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3311 | IF (l_error) THEN |
|---|
| 3312 | WRITE(numout,*) 'Memory allocation error for MatrixV. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 3313 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 3314 | STOP 'stomate_init' |
|---|
| 3315 | ENDIF |
|---|
| 3316 | |
|---|
| 3317 | ALLOCATE(MatrixW(kjpindex,nvm,nbpools,nbpools),stat=ier) |
|---|
| 3318 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3319 | IF (l_error) THEN |
|---|
| 3320 | WRITE(numout,*) 'Memory allocation error for MatrixW. We stop. We need kjpindex*nvm*nbpools*nbpools words', & |
|---|
| 3321 | & kjpindex, nvm, nbpools, nbpools |
|---|
| 3322 | STOP 'stomate_init' |
|---|
| 3323 | ENDIF |
|---|
| 3324 | |
|---|
| 3325 | ALLOCATE(previous_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 3326 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3327 | IF (l_error) THEN |
|---|
| 3328 | WRITE(numout,*) 'Memory allocation error for previous_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 3329 | & kjpindex, nvm, nbpools |
|---|
| 3330 | STOP 'stomate_init' |
|---|
| 3331 | ENDIF |
|---|
| 3332 | |
|---|
| 3333 | ALLOCATE(current_stock(kjpindex,nvm,nbpools),stat=ier) |
|---|
| 3334 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3335 | IF (l_error) THEN |
|---|
| 3336 | WRITE(numout,*) 'Memory allocation error for current_stock. We stop. We need kjpindex*nvm*nbpools words', & |
|---|
| 3337 | & kjpindex, nvm, nbpools |
|---|
| 3338 | STOP 'stomate_init' |
|---|
| 3339 | ENDIF |
|---|
| 3340 | |
|---|
| 3341 | !! 5. File definitions |
|---|
| 3342 | |
|---|
| 3343 | ! Store history and restart files in common variables |
|---|
| 3344 | hist_id_stomate = hist_id_stom |
|---|
| 3345 | hist_id_stomate_IPCC = hist_id_stom_IPCC |
|---|
| 3346 | rest_id_stomate = rest_id_stom |
|---|
| 3347 | |
|---|
| 3348 | ! In STOMATE reduced grids are used containing only terrestrial pixels. |
|---|
| 3349 | ! Build a new indexing table for the vegetation fields separating |
|---|
| 3350 | ! between the different PFTs. Note that ::index has dimension (kjpindex) |
|---|
| 3351 | ! wheras ::indexpft has dimension (kjpindex*nvm). |
|---|
| 3352 | |
|---|
| 3353 | hori_index(:) = index(:) |
|---|
| 3354 | |
|---|
| 3355 | DO j = 1, nvm |
|---|
| 3356 | DO ji = 1, kjpindex |
|---|
| 3357 | horipft_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 3358 | ENDDO |
|---|
| 3359 | ENDDO |
|---|
| 3360 | |
|---|
| 3361 | ! Similar index tables are build for the land cover change variables |
|---|
| 3362 | DO j = 1, 10 |
|---|
| 3363 | DO ji = 1, kjpindex |
|---|
| 3364 | horip10_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 3365 | ENDDO |
|---|
| 3366 | ENDDO |
|---|
| 3367 | |
|---|
| 3368 | DO j = 1, 100 |
|---|
| 3369 | DO ji = 1, kjpindex |
|---|
| 3370 | horip100_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 3371 | ENDDO |
|---|
| 3372 | ENDDO |
|---|
| 3373 | |
|---|
| 3374 | DO j = 1, 11 |
|---|
| 3375 | DO ji = 1, kjpindex |
|---|
| 3376 | horip11_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 3377 | ENDDO |
|---|
| 3378 | ENDDO |
|---|
| 3379 | |
|---|
| 3380 | DO j = 1, 101 |
|---|
| 3381 | DO ji = 1, kjpindex |
|---|
| 3382 | horip101_index((j-1)*kjpindex+ji) = index(ji)+(j-1)*kjpij + offset_omp - offset_mpi |
|---|
| 3383 | ENDDO |
|---|
| 3384 | ENDDO |
|---|
| 3385 | |
|---|
| 3386 | !! 6. Initialization of global and land cover change variables. |
|---|
| 3387 | |
|---|
| 3388 | ! All variables are cumulative variables. bm_to_litter is not and is therefore |
|---|
| 3389 | ! excluded |
|---|
| 3390 | ! bm_to_litter(:,:,:) = zero |
|---|
| 3391 | turnover_daily(:,:,:,:) = zero |
|---|
| 3392 | resp_hetero_d(:,:) = zero |
|---|
| 3393 | nep_daily(:,:) = zero |
|---|
| 3394 | nep_monthly(:,:) = zero |
|---|
| 3395 | cflux_prod_monthly(:) = zero |
|---|
| 3396 | harvest_above_monthly(:) = zero |
|---|
| 3397 | control_moist_daily(:,:) = zero |
|---|
| 3398 | control_temp_daily(:,:) = zero |
|---|
| 3399 | soilcarbon_input_daily(:,:,:) = zero |
|---|
| 3400 | ! Land cover change variables |
|---|
| 3401 | prod10(:,:) = zero |
|---|
| 3402 | prod100(:,:) = zero |
|---|
| 3403 | flux10(:,:) = zero |
|---|
| 3404 | flux100(:,:) = zero |
|---|
| 3405 | convflux(:) = zero |
|---|
| 3406 | cflux_prod10(:) = zero |
|---|
| 3407 | cflux_prod100(:) = zero |
|---|
| 3408 | prod10_harvest(:,:) = zero |
|---|
| 3409 | prod100_harvest(:,:) = zero |
|---|
| 3410 | flux10_harvest(:,:) = zero |
|---|
| 3411 | flux100_harvest(:,:) = zero |
|---|
| 3412 | convflux_harvest(:) = zero |
|---|
| 3413 | cflux_prod10_harvest(:) = zero |
|---|
| 3414 | cflux_prod100_harvest(:) = zero |
|---|
| 3415 | woodharvestpft(:,:) = zero |
|---|
| 3416 | fpc_max(:,:)=zero |
|---|
| 3417 | |
|---|
| 3418 | convfluxpft(:,:)=zero |
|---|
| 3419 | fDeforestToProduct(:,:)=zero |
|---|
| 3420 | fLulccResidue(:,:)=zero |
|---|
| 3421 | fHarvestToProduct(:,:)=zero |
|---|
| 3422 | END SUBROUTINE stomate_init |
|---|
| 3423 | |
|---|
| 3424 | |
|---|
| 3425 | !! ================================================================================================================================ |
|---|
| 3426 | !! SUBROUTINE : stomate_clear |
|---|
| 3427 | !! |
|---|
| 3428 | !>\BRIEF Deallocate memory of the stomate variables. |
|---|
| 3429 | !! |
|---|
| 3430 | !! DESCRIPTION : None |
|---|
| 3431 | !! |
|---|
| 3432 | !! RECENT CHANGE(S) : None |
|---|
| 3433 | !! |
|---|
| 3434 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 3435 | !! |
|---|
| 3436 | !! REFERENCES : None |
|---|
| 3437 | !! |
|---|
| 3438 | !! FLOWCHART : None |
|---|
| 3439 | !! \n |
|---|
| 3440 | !_ ================================================================================================================================ |
|---|
| 3441 | |
|---|
| 3442 | SUBROUTINE stomate_clear |
|---|
| 3443 | |
|---|
| 3444 | !! 1. Deallocate all dynamics variables |
|---|
| 3445 | |
|---|
| 3446 | IF (ALLOCATED(veget_cov_max)) DEALLOCATE(veget_cov_max) |
|---|
| 3447 | IF (ALLOCATED(ind)) DEALLOCATE(ind) |
|---|
| 3448 | IF (ALLOCATED(adapted)) DEALLOCATE(adapted) |
|---|
| 3449 | IF (ALLOCATED(regenerate)) DEALLOCATE(regenerate) |
|---|
| 3450 | IF (ALLOCATED(humrel_daily)) DEALLOCATE(humrel_daily) |
|---|
| 3451 | IF (ALLOCATED(gdd_init_date)) DEALLOCATE(gdd_init_date) |
|---|
| 3452 | IF (ALLOCATED(litterhum_daily)) DEALLOCATE(litterhum_daily) |
|---|
| 3453 | IF (ALLOCATED(t2m_daily)) DEALLOCATE(t2m_daily) |
|---|
| 3454 | IF (ALLOCATED(t2m_min_daily)) DEALLOCATE(t2m_min_daily) |
|---|
| 3455 | IF (ALLOCATED(tsurf_daily)) DEALLOCATE(tsurf_daily) |
|---|
| 3456 | IF (ALLOCATED(tsoil_daily)) DEALLOCATE(tsoil_daily) |
|---|
| 3457 | IF (ALLOCATED(soilhum_daily)) DEALLOCATE(soilhum_daily) |
|---|
| 3458 | IF (ALLOCATED(precip_daily)) DEALLOCATE(precip_daily) |
|---|
| 3459 | IF (ALLOCATED(gpp_daily)) DEALLOCATE(gpp_daily) |
|---|
| 3460 | IF (ALLOCATED(npp_daily)) DEALLOCATE(npp_daily) |
|---|
| 3461 | IF (ALLOCATED(turnover_daily)) DEALLOCATE(turnover_daily) |
|---|
| 3462 | IF (ALLOCATED(turnover_littercalc)) DEALLOCATE(turnover_littercalc) |
|---|
| 3463 | IF (ALLOCATED(humrel_month)) DEALLOCATE(humrel_month) |
|---|
| 3464 | IF (ALLOCATED(humrel_week)) DEALLOCATE(humrel_week) |
|---|
| 3465 | IF (ALLOCATED(t2m_longterm)) DEALLOCATE(t2m_longterm) |
|---|
| 3466 | IF (ALLOCATED(t2m_month)) DEALLOCATE(t2m_month) |
|---|
| 3467 | IF (ALLOCATED(Tseason)) DEALLOCATE(Tseason) |
|---|
| 3468 | IF (ALLOCATED(Tseason_length)) DEALLOCATE(Tseason_length) |
|---|
| 3469 | IF (ALLOCATED(Tseason_tmp)) DEALLOCATE(Tseason_tmp) |
|---|
| 3470 | IF (ALLOCATED(Tmin_spring_time)) DEALLOCATE(Tmin_spring_time) |
|---|
| 3471 | IF (ALLOCATED(onset_date)) DEALLOCATE(onset_date) |
|---|
| 3472 | IF (ALLOCATED(begin_leaves)) DEALLOCATE(begin_leaves) |
|---|
| 3473 | IF (ALLOCATED(t2m_week)) DEALLOCATE(t2m_week) |
|---|
| 3474 | IF (ALLOCATED(tsoil_month)) DEALLOCATE(tsoil_month) |
|---|
| 3475 | IF (ALLOCATED(soilhum_month)) DEALLOCATE(soilhum_month) |
|---|
| 3476 | IF (ALLOCATED(fireindex)) DEALLOCATE(fireindex) |
|---|
| 3477 | IF (ALLOCATED(firelitter)) DEALLOCATE(firelitter) |
|---|
| 3478 | IF (ALLOCATED(maxhumrel_lastyear)) DEALLOCATE(maxhumrel_lastyear) |
|---|
| 3479 | IF (ALLOCATED(maxhumrel_thisyear)) DEALLOCATE(maxhumrel_thisyear) |
|---|
| 3480 | IF (ALLOCATED(minhumrel_lastyear)) DEALLOCATE(minhumrel_lastyear) |
|---|
| 3481 | IF (ALLOCATED(minhumrel_thisyear)) DEALLOCATE(minhumrel_thisyear) |
|---|
| 3482 | IF (ALLOCATED(maxgppweek_lastyear)) DEALLOCATE(maxgppweek_lastyear) |
|---|
| 3483 | IF (ALLOCATED(maxgppweek_thisyear)) DEALLOCATE(maxgppweek_thisyear) |
|---|
| 3484 | IF (ALLOCATED(gdd0_lastyear)) DEALLOCATE(gdd0_lastyear) |
|---|
| 3485 | IF (ALLOCATED(gdd0_thisyear)) DEALLOCATE(gdd0_thisyear) |
|---|
| 3486 | IF (ALLOCATED(precip_lastyear)) DEALLOCATE(precip_lastyear) |
|---|
| 3487 | IF (ALLOCATED(precip_thisyear)) DEALLOCATE(precip_thisyear) |
|---|
| 3488 | IF (ALLOCATED(gdd_m5_dormance)) DEALLOCATE(gdd_m5_dormance) |
|---|
| 3489 | IF (ALLOCATED(gdd_from_growthinit)) DEALLOCATE(gdd_from_growthinit) |
|---|
| 3490 | IF (ALLOCATED(gdd_midwinter)) DEALLOCATE(gdd_midwinter) |
|---|
| 3491 | IF (ALLOCATED(ncd_dormance)) DEALLOCATE(ncd_dormance) |
|---|
| 3492 | IF (ALLOCATED(ngd_minus5)) DEALLOCATE(ngd_minus5) |
|---|
| 3493 | IF (ALLOCATED(PFTpresent)) DEALLOCATE(PFTpresent) |
|---|
| 3494 | IF (ALLOCATED(npp_longterm)) DEALLOCATE(npp_longterm) |
|---|
| 3495 | IF (ALLOCATED(lm_lastyearmax)) DEALLOCATE(lm_lastyearmax) |
|---|
| 3496 | IF (ALLOCATED(lm_thisyearmax)) DEALLOCATE(lm_thisyearmax) |
|---|
| 3497 | IF (ALLOCATED(maxfpc_lastyear)) DEALLOCATE(maxfpc_lastyear) |
|---|
| 3498 | IF (ALLOCATED(maxfpc_thisyear)) DEALLOCATE(maxfpc_thisyear) |
|---|
| 3499 | IF (ALLOCATED(turnover_longterm)) DEALLOCATE(turnover_longterm) |
|---|
| 3500 | IF (ALLOCATED(gpp_week)) DEALLOCATE(gpp_week) |
|---|
| 3501 | IF (ALLOCATED(biomass)) DEALLOCATE(biomass) |
|---|
| 3502 | IF (ALLOCATED(senescence)) DEALLOCATE(senescence) |
|---|
| 3503 | IF (ALLOCATED(when_growthinit)) DEALLOCATE(when_growthinit) |
|---|
| 3504 | IF (ALLOCATED(age)) DEALLOCATE(age) |
|---|
| 3505 | IF (ALLOCATED(resp_hetero_d)) DEALLOCATE(resp_hetero_d) |
|---|
| 3506 | IF (ALLOCATED(resp_hetero_radia)) DEALLOCATE(resp_hetero_radia) |
|---|
| 3507 | IF (ALLOCATED(resp_maint_d)) DEALLOCATE(resp_maint_d) |
|---|
| 3508 | IF (ALLOCATED(resp_growth_d)) DEALLOCATE(resp_growth_d) |
|---|
| 3509 | IF (ALLOCATED(co2_fire)) DEALLOCATE(co2_fire) |
|---|
| 3510 | IF (ALLOCATED(co2_to_bm_dgvm)) DEALLOCATE(co2_to_bm_dgvm) |
|---|
| 3511 | IF (ALLOCATED(veget_lastlight)) DEALLOCATE(veget_lastlight) |
|---|
| 3512 | IF (ALLOCATED(everywhere)) DEALLOCATE(everywhere) |
|---|
| 3513 | IF (ALLOCATED(need_adjacent)) DEALLOCATE(need_adjacent) |
|---|
| 3514 | IF (ALLOCATED(leaf_age)) DEALLOCATE(leaf_age) |
|---|
| 3515 | IF (ALLOCATED(leaf_frac)) DEALLOCATE(leaf_frac) |
|---|
| 3516 | IF (ALLOCATED(RIP_time)) DEALLOCATE(RIP_time) |
|---|
| 3517 | IF (ALLOCATED(time_hum_min)) DEALLOCATE(time_hum_min) |
|---|
| 3518 | IF (ALLOCATED(hum_min_dormance)) DEALLOCATE(hum_min_dormance) |
|---|
| 3519 | IF (ALLOCATED(litterpart)) DEALLOCATE(litterpart) |
|---|
| 3520 | IF (ALLOCATED(litter)) DEALLOCATE(litter) |
|---|
| 3521 | IF (ALLOCATED(dead_leaves)) DEALLOCATE(dead_leaves) |
|---|
| 3522 | IF (ALLOCATED(carbon)) DEALLOCATE(carbon) |
|---|
| 3523 | IF (ALLOCATED(lignin_struc)) DEALLOCATE(lignin_struc) |
|---|
| 3524 | IF (ALLOCATED(turnover_time)) DEALLOCATE(turnover_time) |
|---|
| 3525 | IF (ALLOCATED(nep_daily)) DEALLOCATE(nep_daily) |
|---|
| 3526 | IF (ALLOCATED(nep_monthly)) DEALLOCATE(nep_monthly) |
|---|
| 3527 | IF (ALLOCATED(harvest_above_monthly)) DEALLOCATE (harvest_above_monthly) |
|---|
| 3528 | IF (ALLOCATED(cflux_prod_monthly)) DEALLOCATE (cflux_prod_monthly) |
|---|
| 3529 | IF (ALLOCATED(bm_to_litter)) DEALLOCATE(bm_to_litter) |
|---|
| 3530 | IF (ALLOCATED(bm_to_littercalc)) DEALLOCATE(bm_to_littercalc) |
|---|
| 3531 | IF (ALLOCATED(herbivores)) DEALLOCATE(herbivores) |
|---|
| 3532 | IF (ALLOCATED(resp_maint_part_radia)) DEALLOCATE(resp_maint_part_radia) |
|---|
| 3533 | IF (ALLOCATED(resp_maint_radia)) DEALLOCATE(resp_maint_radia) |
|---|
| 3534 | IF (ALLOCATED(resp_maint_part)) DEALLOCATE(resp_maint_part) |
|---|
| 3535 | IF (ALLOCATED(hori_index)) DEALLOCATE(hori_index) |
|---|
| 3536 | IF (ALLOCATED(horipft_index)) DEALLOCATE(horipft_index) |
|---|
| 3537 | IF (ALLOCATED(clay_fm)) DEALLOCATE(clay_fm) |
|---|
| 3538 | IF (ALLOCATED(humrel_daily_fm)) DEALLOCATE(humrel_daily_fm) |
|---|
| 3539 | IF (ALLOCATED(litterhum_daily_fm)) DEALLOCATE(litterhum_daily_fm) |
|---|
| 3540 | IF (ALLOCATED(t2m_daily_fm)) DEALLOCATE(t2m_daily_fm) |
|---|
| 3541 | IF (ALLOCATED(t2m_min_daily_fm)) DEALLOCATE(t2m_min_daily_fm) |
|---|
| 3542 | IF (ALLOCATED(tsurf_daily_fm)) DEALLOCATE(tsurf_daily_fm) |
|---|
| 3543 | IF (ALLOCATED(tsoil_daily_fm)) DEALLOCATE(tsoil_daily_fm) |
|---|
| 3544 | IF (ALLOCATED(soilhum_daily_fm)) DEALLOCATE(soilhum_daily_fm) |
|---|
| 3545 | IF (ALLOCATED(precip_fm)) DEALLOCATE(precip_fm) |
|---|
| 3546 | IF (ALLOCATED(gpp_daily_fm)) DEALLOCATE(gpp_daily_fm) |
|---|
| 3547 | IF (ALLOCATED(veget_fm)) DEALLOCATE(veget_fm) |
|---|
| 3548 | IF (ALLOCATED(veget_max_fm)) DEALLOCATE(veget_max_fm) |
|---|
| 3549 | IF (ALLOCATED(lai_fm)) DEALLOCATE(lai_fm) |
|---|
| 3550 | ! |
|---|
| 3551 | IF (ALLOCATED(ok_equilibrium)) DEALLOCATE(ok_equilibrium) |
|---|
| 3552 | IF (ALLOCATED(carbon_eq)) DEALLOCATE(carbon_eq) |
|---|
| 3553 | IF (ALLOCATED(matrixA)) DEALLOCATE(matrixA) |
|---|
| 3554 | IF (ALLOCATED(vectorB)) DEALLOCATE(vectorB) |
|---|
| 3555 | IF (ALLOCATED(MatrixV)) DEALLOCATE(MatrixV) |
|---|
| 3556 | IF (ALLOCATED(VectorU)) DEALLOCATE(VectorU) |
|---|
| 3557 | IF (ALLOCATED(MatrixW)) DEALLOCATE(MatrixW) |
|---|
| 3558 | IF (ALLOCATED(previous_stock)) DEALLOCATE(previous_stock) |
|---|
| 3559 | IF (ALLOCATED(current_stock)) DEALLOCATE(current_stock) |
|---|
| 3560 | IF (ALLOCATED(nbp_accu)) DEALLOCATE(nbp_accu) |
|---|
| 3561 | IF (ALLOCATED(nbp_flux)) DEALLOCATE(nbp_flux) |
|---|
| 3562 | |
|---|
| 3563 | IF (ALLOCATED(clay_fm_g)) DEALLOCATE(clay_fm_g) |
|---|
| 3564 | IF (ALLOCATED(humrel_daily_fm_g)) DEALLOCATE(humrel_daily_fm_g) |
|---|
| 3565 | IF (ALLOCATED(litterhum_daily_fm_g)) DEALLOCATE(litterhum_daily_fm_g) |
|---|
| 3566 | IF (ALLOCATED(t2m_daily_fm_g)) DEALLOCATE(t2m_daily_fm_g) |
|---|
| 3567 | IF (ALLOCATED(t2m_min_daily_fm_g)) DEALLOCATE(t2m_min_daily_fm_g) |
|---|
| 3568 | IF (ALLOCATED(tsurf_daily_fm_g)) DEALLOCATE(tsurf_daily_fm_g) |
|---|
| 3569 | IF (ALLOCATED(tsoil_daily_fm_g)) DEALLOCATE(tsoil_daily_fm_g) |
|---|
| 3570 | IF (ALLOCATED(soilhum_daily_fm_g)) DEALLOCATE(soilhum_daily_fm_g) |
|---|
| 3571 | IF (ALLOCATED(precip_fm_g)) DEALLOCATE(precip_fm_g) |
|---|
| 3572 | IF (ALLOCATED(gpp_daily_fm_g)) DEALLOCATE(gpp_daily_fm_g) |
|---|
| 3573 | IF (ALLOCATED(veget_fm_g)) DEALLOCATE(veget_fm_g) |
|---|
| 3574 | IF (ALLOCATED(veget_max_fm_g)) DEALLOCATE(veget_max_fm_g) |
|---|
| 3575 | IF (ALLOCATED(lai_fm_g)) DEALLOCATE(lai_fm_g) |
|---|
| 3576 | |
|---|
| 3577 | IF (ALLOCATED(isf)) DEALLOCATE(isf) |
|---|
| 3578 | IF (ALLOCATED(nf_written)) DEALLOCATE(nf_written) |
|---|
| 3579 | IF (ALLOCATED(nf_cumul)) DEALLOCATE(nf_cumul) |
|---|
| 3580 | IF (ALLOCATED(nforce)) DEALLOCATE(nforce) |
|---|
| 3581 | IF (ALLOCATED(control_moist)) DEALLOCATE(control_moist) |
|---|
| 3582 | IF (ALLOCATED(control_temp)) DEALLOCATE(control_temp) |
|---|
| 3583 | IF (ALLOCATED(soilcarbon_input)) DEALLOCATE(soilcarbon_input) |
|---|
| 3584 | IF ( ALLOCATED (horip10_index)) DEALLOCATE (horip10_index) |
|---|
| 3585 | IF ( ALLOCATED (horip100_index)) DEALLOCATE (horip100_index) |
|---|
| 3586 | IF ( ALLOCATED (horip11_index)) DEALLOCATE (horip11_index) |
|---|
| 3587 | IF ( ALLOCATED (horip101_index)) DEALLOCATE (horip101_index) |
|---|
| 3588 | IF ( ALLOCATED (prod10)) DEALLOCATE (prod10) |
|---|
| 3589 | IF ( ALLOCATED (prod100)) DEALLOCATE (prod100) |
|---|
| 3590 | IF ( ALLOCATED (flux10)) DEALLOCATE (flux10) |
|---|
| 3591 | IF ( ALLOCATED (flux100)) DEALLOCATE (flux100) |
|---|
| 3592 | IF ( ALLOCATED (convflux)) DEALLOCATE (convflux) |
|---|
| 3593 | IF ( ALLOCATED (cflux_prod10)) DEALLOCATE (cflux_prod10) |
|---|
| 3594 | IF ( ALLOCATED (cflux_prod100)) DEALLOCATE (cflux_prod100) |
|---|
| 3595 | IF ( ALLOCATED (prod10_harvest)) DEALLOCATE (prod10_harvest) |
|---|
| 3596 | IF ( ALLOCATED (prod100_harvest)) DEALLOCATE (prod100_harvest) |
|---|
| 3597 | IF ( ALLOCATED (flux10_harvest)) DEALLOCATE (flux10_harvest) |
|---|
| 3598 | IF ( ALLOCATED (flux100_harvest)) DEALLOCATE (flux100_harvest) |
|---|
| 3599 | IF ( ALLOCATED (convflux_harvest)) DEALLOCATE (convflux_harvest) |
|---|
| 3600 | IF ( ALLOCATED (cflux_prod10_harvest)) DEALLOCATE (cflux_prod10_harvest) |
|---|
| 3601 | IF ( ALLOCATED (cflux_prod100_harvest)) DEALLOCATE (cflux_prod100_harvest) |
|---|
| 3602 | IF ( ALLOCATED (woodharvestpft)) DEALLOCATE (woodharvestpft) |
|---|
| 3603 | IF ( ALLOCATED (convfluxpft)) DEALLOCATE (convfluxpft) |
|---|
| 3604 | IF ( ALLOCATED (fDeforestToProduct)) DEALLOCATE (fDeforestToProduct) |
|---|
| 3605 | IF ( ALLOCATED (fLulccResidue)) DEALLOCATE (fLulccResidue) |
|---|
| 3606 | IF ( ALLOCATED (fHarvestToProduct)) DEALLOCATE (fHarvestToProduct) |
|---|
| 3607 | IF ( ALLOCATED (harvest_above)) DEALLOCATE (harvest_above) |
|---|
| 3608 | IF ( ALLOCATED (soilcarbon_input_daily)) DEALLOCATE (soilcarbon_input_daily) |
|---|
| 3609 | IF ( ALLOCATED (control_temp_daily)) DEALLOCATE (control_temp_daily) |
|---|
| 3610 | IF ( ALLOCATED (control_moist_daily)) DEALLOCATE (control_moist_daily) |
|---|
| 3611 | |
|---|
| 3612 | IF ( ALLOCATED (fpc_max)) DEALLOCATE (fpc_max) |
|---|
| 3613 | |
|---|
| 3614 | !! 2. reset l_first |
|---|
| 3615 | |
|---|
| 3616 | l_first_stomate=.TRUE. |
|---|
| 3617 | |
|---|
| 3618 | !! 3. call to clear functions |
|---|
| 3619 | |
|---|
| 3620 | CALL season_clear |
|---|
| 3621 | CALL stomatelpj_clear |
|---|
| 3622 | CALL littercalc_clear |
|---|
| 3623 | CALL vmax_clear |
|---|
| 3624 | |
|---|
| 3625 | END SUBROUTINE stomate_clear |
|---|
| 3626 | |
|---|
| 3627 | |
|---|
| 3628 | !! ================================================================================================================================ |
|---|
| 3629 | !! SUBROUTINE : stomate_var_init |
|---|
| 3630 | !! |
|---|
| 3631 | !>\BRIEF Initialize variables of stomate with a none-zero initial value. |
|---|
| 3632 | !! Subroutine is called only if ::ok_stomate = .TRUE. STOMATE diagnoses some |
|---|
| 3633 | !! variables for SECHIBA : assim_param, deadleaf_cover, etc. These variables can |
|---|
| 3634 | !! be recalculated from STOMATE's prognostic variables. Note that height is |
|---|
| 3635 | !! saved in SECHIBA. |
|---|
| 3636 | !! |
|---|
| 3637 | !! DESCRIPTION : None |
|---|
| 3638 | !! |
|---|
| 3639 | !! RECENT CHANGE(S) : None |
|---|
| 3640 | !! |
|---|
| 3641 | !! MAIN OUTPUT VARIABLE(S): leaf age (::leaf_age) and fraction of leaves in leaf |
|---|
| 3642 | !! age class (::leaf_frac). The maximum water on vegetation available for |
|---|
| 3643 | !! interception, fraction of soil covered by dead leaves |
|---|
| 3644 | !! (::deadleaf_cover) and assimilation parameters (:: assim_param). |
|---|
| 3645 | !! |
|---|
| 3646 | !! REFERENCE(S) : None |
|---|
| 3647 | !! |
|---|
| 3648 | !! FLOWCHART : None |
|---|
| 3649 | !! \n |
|---|
| 3650 | !_ ================================================================================================================================ |
|---|
| 3651 | |
|---|
| 3652 | SUBROUTINE stomate_var_init & |
|---|
| 3653 | & (kjpindex, veget_cov_max, leaf_age, leaf_frac, & |
|---|
| 3654 | & dead_leaves, & |
|---|
| 3655 | & veget, lai, deadleaf_cover, assim_param) |
|---|
| 3656 | |
|---|
| 3657 | |
|---|
| 3658 | !! 0. Variable and parameter declaration |
|---|
| 3659 | |
|---|
| 3660 | !! 0.1 Input variables |
|---|
| 3661 | |
|---|
| 3662 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only |
|---|
| 3663 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget !! Fraction of pixel covered by PFT. Fraction |
|---|
| 3664 | !! accounts for none-biological land covers |
|---|
| 3665 | !! (unitless) |
|---|
| 3666 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: veget_cov_max !! Fractional coverage: maximum share of the pixel |
|---|
| 3667 | !! covered by a PFT (unitless) |
|---|
| 3668 | REAL(r_std),DIMENSION(kjpindex,nvm,nlitt),INTENT(in) :: dead_leaves !! Metabolic and structural fraction of dead leaves |
|---|
| 3669 | !! per ground area |
|---|
| 3670 | !! @tex $(gC m^{-2})$ @endtex |
|---|
| 3671 | REAL(r_std),DIMENSION(kjpindex,nvm),INTENT(in) :: lai !! Leaf area index |
|---|
| 3672 | !! @tex $(m^2 m{-2})$ @endtex |
|---|
| 3673 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages),INTENT(in) :: leaf_age !! Age of different leaf classes per PFT (days) |
|---|
| 3674 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages),INTENT(in) :: leaf_frac !! Fraction of leaves in leaf age class per PFT |
|---|
| 3675 | !! (unitless; 1) |
|---|
| 3676 | |
|---|
| 3677 | !! 0.2 Modified variables |
|---|
| 3678 | REAL(r_std),DIMENSION(kjpindex,nvm,npco2),INTENT(inout) :: assim_param !! min+max+opt temperatures (K) & vmax for |
|---|
| 3679 | !! photosynthesis |
|---|
| 3680 | |
|---|
| 3681 | !! 0.3 Output variables |
|---|
| 3682 | |
|---|
| 3683 | REAL(r_std),DIMENSION(kjpindex), INTENT (out) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
|---|
| 3684 | !! (unitless) |
|---|
| 3685 | |
|---|
| 3686 | |
|---|
| 3687 | ! 0.4 Local variables |
|---|
| 3688 | |
|---|
| 3689 | REAL(r_std),PARAMETER :: dt_0 = zero !! Dummy time step, must be zero |
|---|
| 3690 | REAL(r_std),DIMENSION(kjpindex,nvm) :: vcmax !! Dummy vcmax |
|---|
| 3691 | !! @tex $(\mu mol m^{-2} s^{-1})$ @endtex |
|---|
| 3692 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages) :: leaf_age_tmp !! Temporary variable |
|---|
| 3693 | REAL(r_std),DIMENSION(kjpindex,nvm,nleafages) :: leaf_frac_tmp !! Temporary variable |
|---|
| 3694 | !! (unitless; 1) |
|---|
| 3695 | INTEGER(i_std) :: j !! Index (untiless) |
|---|
| 3696 | |
|---|
| 3697 | !_ ================================================================================================================================ |
|---|
| 3698 | |
|---|
| 3699 | |
|---|
| 3700 | ! Calculate assim_param if it was not found in the restart file |
|---|
| 3701 | IF (ALL(assim_param(:,:,:)==val_exp)) THEN |
|---|
| 3702 | ! Use temporary leaf_age_tmp and leaf_frac_tmp to preserve the input variables from being modified by the subroutine vmax. |
|---|
| 3703 | leaf_age_tmp(:,:,:)=leaf_age(:,:,:) |
|---|
| 3704 | leaf_frac_tmp(:,:,:)=leaf_frac(:,:,:) |
|---|
| 3705 | |
|---|
| 3706 | !! 1.1 Calculate a temporary vcmax (stomate_vmax.f90) |
|---|
| 3707 | CALL vmax (kjpindex, dt_0, leaf_age_tmp, leaf_frac_tmp, vcmax ) |
|---|
| 3708 | |
|---|
| 3709 | !! 1.2 transform into nvm vegetation types |
|---|
| 3710 | assim_param(:,:,ivcmax) = zero |
|---|
| 3711 | DO j = 2, nvm |
|---|
| 3712 | assim_param(:,j,ivcmax)=vcmax(:,j) |
|---|
| 3713 | ENDDO |
|---|
| 3714 | END IF |
|---|
| 3715 | |
|---|
| 3716 | !! 2. Dead leaf cover (stomate_litter.f90) |
|---|
| 3717 | CALL deadleaf (kjpindex, veget_cov_max, dead_leaves, deadleaf_cover) |
|---|
| 3718 | |
|---|
| 3719 | END SUBROUTINE stomate_var_init |
|---|
| 3720 | |
|---|
| 3721 | |
|---|
| 3722 | !! ================================================================================================================================ |
|---|
| 3723 | !! INTERFACE : stomate_accu |
|---|
| 3724 | !! |
|---|
| 3725 | !>\BRIEF Accumulate a variable for the time period specified by |
|---|
| 3726 | !! dt_sechiba or calculate the mean value over the period of dt_stomate |
|---|
| 3727 | !! |
|---|
| 3728 | !! DESCRIPTION : Accumulate a variable for the time period specified by |
|---|
| 3729 | !! dt_sechiba or calculate the mean value over the period of dt_stomate. |
|---|
| 3730 | !! stomate_accu interface can be used for variables having 1, 2 or 3 dimensions. |
|---|
| 3731 | !! The corresponding subruoutine stomate_accu_r1d, stomate_accu_r2d or |
|---|
| 3732 | !! stomate_accu_r3d will be selected through the interface depending on the number of dimensions. |
|---|
| 3733 | !! |
|---|
| 3734 | !! RECENT CHANGE(S) : None |
|---|
| 3735 | !! |
|---|
| 3736 | !! MAIN OUTPUT VARIABLE(S): accumulated or mean variable ::field_out:: |
|---|
| 3737 | !! |
|---|
| 3738 | !! REFERENCE(S) : None |
|---|
| 3739 | !! |
|---|
| 3740 | !! FLOWCHART : None |
|---|
| 3741 | !! \n |
|---|
| 3742 | !_ ================================================================================================================================ |
|---|
| 3743 | |
|---|
| 3744 | SUBROUTINE stomate_accu_r1d (ldmean, field_in, field_out) |
|---|
| 3745 | |
|---|
| 3746 | !! 0. Variable and parameter declaration |
|---|
| 3747 | |
|---|
| 3748 | !! 0.1 Input variables |
|---|
| 3749 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 3750 | REAL(r_std),DIMENSION(:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 3751 | |
|---|
| 3752 | !! 0.2 Modified variables |
|---|
| 3753 | REAL(r_std),DIMENSION(:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 3754 | |
|---|
| 3755 | !_ ================================================================================================================================ |
|---|
| 3756 | |
|---|
| 3757 | !! 1. Accumulate field |
|---|
| 3758 | |
|---|
| 3759 | field_out(:) = field_out(:)+field_in(:)*dt_sechiba |
|---|
| 3760 | |
|---|
| 3761 | !! 2. Mean fields |
|---|
| 3762 | |
|---|
| 3763 | IF (ldmean) THEN |
|---|
| 3764 | field_out(:) = field_out(:)/dt_stomate |
|---|
| 3765 | ENDIF |
|---|
| 3766 | |
|---|
| 3767 | END SUBROUTINE stomate_accu_r1d |
|---|
| 3768 | |
|---|
| 3769 | SUBROUTINE stomate_accu_r2d (ldmean, field_in, field_out) |
|---|
| 3770 | |
|---|
| 3771 | !! 0. Variable and parameter declaration |
|---|
| 3772 | |
|---|
| 3773 | !! 0.1 Input variables |
|---|
| 3774 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 3775 | REAL(r_std),DIMENSION(:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 3776 | |
|---|
| 3777 | !! 0.2 Modified variables |
|---|
| 3778 | REAL(r_std),DIMENSION(:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 3779 | |
|---|
| 3780 | !_ ================================================================================================================================ |
|---|
| 3781 | |
|---|
| 3782 | !! 1. Accumulate field |
|---|
| 3783 | |
|---|
| 3784 | field_out(:,:) = field_out(:,:)+field_in(:,:)*dt_sechiba |
|---|
| 3785 | |
|---|
| 3786 | !! 2. Mean fields |
|---|
| 3787 | |
|---|
| 3788 | IF (ldmean) THEN |
|---|
| 3789 | field_out(:,:) = field_out(:,:)/dt_stomate |
|---|
| 3790 | ENDIF |
|---|
| 3791 | |
|---|
| 3792 | END SUBROUTINE stomate_accu_r2d |
|---|
| 3793 | |
|---|
| 3794 | SUBROUTINE stomate_accu_r3d (ldmean, field_in, field_out) |
|---|
| 3795 | |
|---|
| 3796 | !! 0. Variable and parameter declaration |
|---|
| 3797 | |
|---|
| 3798 | !! 0.1 Input variables |
|---|
| 3799 | LOGICAL,INTENT(in) :: ldmean !! Flag to calculate the mean over |
|---|
| 3800 | REAL(r_std),DIMENSION(:,:,:),INTENT(in) :: field_in !! Field that needs to be accumulated |
|---|
| 3801 | |
|---|
| 3802 | !! 0.2 Modified variables |
|---|
| 3803 | REAL(r_std),DIMENSION(:,:,:),INTENT(inout) :: field_out !! Accumulated or mean field |
|---|
| 3804 | |
|---|
| 3805 | !_ ================================================================================================================================ |
|---|
| 3806 | |
|---|
| 3807 | !! 1. Accumulate field |
|---|
| 3808 | |
|---|
| 3809 | field_out(:,:,:) = field_out(:,:,:)+field_in(:,:,:)*dt_sechiba |
|---|
| 3810 | |
|---|
| 3811 | !! 2. Mean fields |
|---|
| 3812 | |
|---|
| 3813 | IF (ldmean) THEN |
|---|
| 3814 | field_out(:,:,:) = field_out(:,:,:)/dt_stomate |
|---|
| 3815 | ENDIF |
|---|
| 3816 | |
|---|
| 3817 | END SUBROUTINE stomate_accu_r3d |
|---|
| 3818 | |
|---|
| 3819 | !! ================================================================================================================================ |
|---|
| 3820 | !! SUBROUTINE : init_forcing |
|---|
| 3821 | !! |
|---|
| 3822 | !>\BRIEF Allocate memory for the variables containing the forcing data. |
|---|
| 3823 | !! The maximum size of the allocated memory is specified in run definition file |
|---|
| 3824 | !! (::max_totsize) and needs to be a compromise between charging the memory and |
|---|
| 3825 | !! accessing disks to get the forcing data. |
|---|
| 3826 | !! |
|---|
| 3827 | !! DESCRIPTION : None |
|---|
| 3828 | !! |
|---|
| 3829 | !! RECENT CHANGE(S) : None |
|---|
| 3830 | !! |
|---|
| 3831 | !! MAIN OUTPUT VARIABLE(S): Strictly speaking the subroutine has no output |
|---|
| 3832 | !! variables. However, the routine allocates memory for later use. |
|---|
| 3833 | !! |
|---|
| 3834 | !! REFERENCE(S) : None |
|---|
| 3835 | !! |
|---|
| 3836 | !! FLOWCHART : None |
|---|
| 3837 | !! \n |
|---|
| 3838 | !_ ================================================================================================================================ |
|---|
| 3839 | |
|---|
| 3840 | SUBROUTINE init_forcing (kjpindex,nsfm,nsft_loc) |
|---|
| 3841 | |
|---|
| 3842 | !! 0. Variable and parameter declaration |
|---|
| 3843 | |
|---|
| 3844 | !! 0.1 Input variables |
|---|
| 3845 | INTEGER(i_std),INTENT(in) :: kjpindex !! Domain size - terrestrial pixels only (unitless) |
|---|
| 3846 | INTEGER(i_std),INTENT(in) :: nsfm !! Number of time steps that can be stored in memory (unitless) |
|---|
| 3847 | INTEGER(i_std),INTENT(in) :: nsft_loc !! Number of time steps in a year (unitless) |
|---|
| 3848 | |
|---|
| 3849 | !! 0.2 Output variables |
|---|
| 3850 | |
|---|
| 3851 | !! 0.3 Modified variables |
|---|
| 3852 | |
|---|
| 3853 | !! 0.4 Local variables |
|---|
| 3854 | |
|---|
| 3855 | LOGICAL :: l_error !! Check errors in netcdf call |
|---|
| 3856 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 3857 | !_ ================================================================================================================================ |
|---|
| 3858 | |
|---|
| 3859 | !! 1. Allocate memory |
|---|
| 3860 | |
|---|
| 3861 | ! Note ::nvm is number of PFTs and ::nslm is number of soil layers |
|---|
| 3862 | l_error = .FALSE. |
|---|
| 3863 | ALLOCATE(clay_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3864 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3865 | IF (l_error) THEN |
|---|
| 3866 | WRITE(numout,*) 'Problem with memory allocation: forcing variables clay_fm ',kjpindex,nsfm |
|---|
| 3867 | STOP 'init_forcing' |
|---|
| 3868 | ENDIF |
|---|
| 3869 | ALLOCATE(humrel_daily_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 3870 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3871 | IF (l_error) THEN |
|---|
| 3872 | WRITE(numout,*) 'Problem with memory allocation: forcing variables humrel_daily_fm ',kjpindex,nvm,nsfm |
|---|
| 3873 | STOP 'init_forcing' |
|---|
| 3874 | ENDIF |
|---|
| 3875 | ALLOCATE(litterhum_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3876 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3877 | IF (l_error) THEN |
|---|
| 3878 | WRITE(numout,*) 'Problem with memory allocation: forcing variables litterhum_daily_fm ',kjpindex,nsfm |
|---|
| 3879 | STOP 'init_forcing' |
|---|
| 3880 | ENDIF |
|---|
| 3881 | ALLOCATE(t2m_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3882 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3883 | IF (l_error) THEN |
|---|
| 3884 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_daily_fm ',kjpindex,nsfm |
|---|
| 3885 | STOP 'init_forcing' |
|---|
| 3886 | ENDIF |
|---|
| 3887 | ALLOCATE(t2m_min_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3888 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3889 | IF (l_error) THEN |
|---|
| 3890 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_min_daily_fm ',kjpindex,nsfm |
|---|
| 3891 | STOP 'init_forcing' |
|---|
| 3892 | ENDIF |
|---|
| 3893 | ALLOCATE(tsurf_daily_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3894 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3895 | IF (l_error) THEN |
|---|
| 3896 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsurf_daily_fm ',kjpindex,nsfm |
|---|
| 3897 | STOP 'init_forcing' |
|---|
| 3898 | ENDIF |
|---|
| 3899 | ALLOCATE(tsoil_daily_fm(kjpindex,nslm,nsfm),stat=ier) |
|---|
| 3900 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3901 | IF (l_error) THEN |
|---|
| 3902 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsoil_daily_fm ',kjpindex,nslm,nsfm |
|---|
| 3903 | STOP 'init_forcing' |
|---|
| 3904 | ENDIF |
|---|
| 3905 | ALLOCATE(soilhum_daily_fm(kjpindex,nslm,nsfm),stat=ier) |
|---|
| 3906 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3907 | IF (l_error) THEN |
|---|
| 3908 | WRITE(numout,*) 'Problem with memory allocation: forcing variables soilhum_daily_fm ',kjpindex,nslm,nsfm |
|---|
| 3909 | STOP 'init_forcing' |
|---|
| 3910 | ENDIF |
|---|
| 3911 | ALLOCATE(precip_fm(kjpindex,nsfm),stat=ier) |
|---|
| 3912 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3913 | IF (l_error) THEN |
|---|
| 3914 | WRITE(numout,*) 'Problem with memory allocation: forcing variables precip_fm ',kjpindex,nsfm |
|---|
| 3915 | STOP 'init_forcing' |
|---|
| 3916 | ENDIF |
|---|
| 3917 | ALLOCATE(gpp_daily_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 3918 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3919 | IF (l_error) THEN |
|---|
| 3920 | WRITE(numout,*) 'Problem with memory allocation: forcing variables gpp_daily_fm ',kjpindex,nvm,nsfm |
|---|
| 3921 | STOP 'init_forcing' |
|---|
| 3922 | ENDIF |
|---|
| 3923 | ALLOCATE(veget_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 3924 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3925 | IF (l_error) THEN |
|---|
| 3926 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_fm ',kjpindex,nvm,nsfm |
|---|
| 3927 | STOP 'init_forcing' |
|---|
| 3928 | ENDIF |
|---|
| 3929 | ALLOCATE(veget_max_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 3930 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3931 | IF (l_error) THEN |
|---|
| 3932 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_max_fm ',kjpindex,nvm,nsfm |
|---|
| 3933 | STOP 'init_forcing' |
|---|
| 3934 | ENDIF |
|---|
| 3935 | ALLOCATE(lai_fm(kjpindex,nvm,nsfm),stat=ier) |
|---|
| 3936 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3937 | IF (l_error) THEN |
|---|
| 3938 | WRITE(numout,*) 'Problem with memory allocation: forcing variables lai_fm ',kjpindex,nvm,nsfm |
|---|
| 3939 | STOP 'init_forcing' |
|---|
| 3940 | ENDIF |
|---|
| 3941 | ALLOCATE(isf(nsfm),stat=ier) |
|---|
| 3942 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3943 | IF (l_error) THEN |
|---|
| 3944 | WRITE(numout,*) 'Problem with memory allocation: forcing variables isf ',nsfm |
|---|
| 3945 | STOP 'init_forcing' |
|---|
| 3946 | ENDIF |
|---|
| 3947 | ALLOCATE(nf_written(nsft_loc),stat=ier) |
|---|
| 3948 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3949 | IF (l_error) THEN |
|---|
| 3950 | WRITE(numout,*) 'Problem with memory allocation: forcing variables nf_written ',nsft_loc |
|---|
| 3951 | STOP 'init_forcing' |
|---|
| 3952 | ENDIF |
|---|
| 3953 | ALLOCATE(nf_cumul(nsft_loc),stat=ier) |
|---|
| 3954 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3955 | IF (l_error) THEN |
|---|
| 3956 | WRITE(numout,*) 'Problem with memory allocation: forcing variables nf_cumul ',nsft_loc |
|---|
| 3957 | STOP 'init_forcing' |
|---|
| 3958 | ENDIF |
|---|
| 3959 | |
|---|
| 3960 | !! 2. Allocate memory for the root processor only (parallel computing) |
|---|
| 3961 | |
|---|
| 3962 | ! Where, ::nbp_glo is the number of global continental points |
|---|
| 3963 | IF (is_root_prc) THEN |
|---|
| 3964 | ALLOCATE(clay_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 3965 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3966 | IF (l_error) THEN |
|---|
| 3967 | WRITE(numout,*) 'Problem with memory allocation: forcing variables clay_fm_g ',nbp_glo,nsfm |
|---|
| 3968 | STOP 'init_forcing' |
|---|
| 3969 | ENDIF |
|---|
| 3970 | ALLOCATE(humrel_daily_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 3971 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3972 | IF (l_error) THEN |
|---|
| 3973 | WRITE(numout,*) 'Problem with memory allocation: forcing variables humrel_daily_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 3974 | STOP 'init_forcing' |
|---|
| 3975 | ENDIF |
|---|
| 3976 | ALLOCATE(litterhum_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 3977 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3978 | IF (l_error) THEN |
|---|
| 3979 | WRITE(numout,*) 'Problem with memory allocation: forcing variables litterhum_daily_fm_g ',nbp_glo,nsfm |
|---|
| 3980 | STOP 'init_forcing' |
|---|
| 3981 | ENDIF |
|---|
| 3982 | ALLOCATE(t2m_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 3983 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3984 | IF (l_error) THEN |
|---|
| 3985 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_daily_fm_g ',nbp_glo,nsfm |
|---|
| 3986 | STOP 'init_forcing' |
|---|
| 3987 | ENDIF |
|---|
| 3988 | ALLOCATE(t2m_min_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 3989 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3990 | IF (l_error) THEN |
|---|
| 3991 | WRITE(numout,*) 'Problem with memory allocation: forcing variables t2m_min_daily_fm_g ',nbp_glo,nsfm |
|---|
| 3992 | STOP 'init_forcing' |
|---|
| 3993 | ENDIF |
|---|
| 3994 | ALLOCATE(tsurf_daily_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 3995 | l_error = l_error .OR. (ier /= 0) |
|---|
| 3996 | IF (l_error) THEN |
|---|
| 3997 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsurf_daily_fm_g ',nbp_glo,nsfm |
|---|
| 3998 | STOP 'init_forcing' |
|---|
| 3999 | ENDIF |
|---|
| 4000 | ALLOCATE(tsoil_daily_fm_g(nbp_glo,nslm,nsfm),stat=ier) |
|---|
| 4001 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4002 | IF (l_error) THEN |
|---|
| 4003 | WRITE(numout,*) 'Problem with memory allocation: forcing variables tsoil_daily_fm_g ',nbp_glo,nslm,nsfm |
|---|
| 4004 | STOP 'init_forcing' |
|---|
| 4005 | ENDIF |
|---|
| 4006 | ALLOCATE(soilhum_daily_fm_g(nbp_glo,nslm,nsfm),stat=ier) |
|---|
| 4007 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4008 | IF (l_error) THEN |
|---|
| 4009 | WRITE(numout,*) 'Problem with memory allocation: forcing variables soilhum_daily_fm_g ',nbp_glo,nslm,nsfm |
|---|
| 4010 | STOP 'init_forcing' |
|---|
| 4011 | ENDIF |
|---|
| 4012 | ALLOCATE(precip_fm_g(nbp_glo,nsfm),stat=ier) |
|---|
| 4013 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4014 | IF (l_error) THEN |
|---|
| 4015 | WRITE(numout,*) 'Problem with memory allocation: forcing variables precip_fm_g ',nbp_glo,nsfm |
|---|
| 4016 | STOP 'init_forcing' |
|---|
| 4017 | ENDIF |
|---|
| 4018 | ALLOCATE(gpp_daily_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 4019 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4020 | IF (l_error) THEN |
|---|
| 4021 | WRITE(numout,*) 'Problem with memory allocation: forcing variables gpp_daily_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 4022 | STOP 'init_forcing' |
|---|
| 4023 | ENDIF |
|---|
| 4024 | ALLOCATE(veget_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 4025 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4026 | IF (l_error) THEN |
|---|
| 4027 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 4028 | STOP 'init_forcing' |
|---|
| 4029 | ENDIF |
|---|
| 4030 | ALLOCATE(veget_max_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 4031 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4032 | IF (l_error) THEN |
|---|
| 4033 | WRITE(numout,*) 'Problem with memory allocation: forcing variables veget_max_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 4034 | STOP 'init_forcing' |
|---|
| 4035 | ENDIF |
|---|
| 4036 | ALLOCATE(lai_fm_g(nbp_glo,nvm,nsfm),stat=ier) |
|---|
| 4037 | l_error = l_error .OR. (ier /= 0) |
|---|
| 4038 | IF (l_error) THEN |
|---|
| 4039 | WRITE(numout,*) 'Problem with memory allocation: forcing variables lai_fm_g ',nbp_glo,nvm,nsfm |
|---|
| 4040 | STOP 'init_forcing' |
|---|
| 4041 | ENDIF |
|---|
| 4042 | ELSE |
|---|
| 4043 | ! Allocate memory for co-processors |
|---|
| 4044 | ALLOCATE(clay_fm_g(0,nsfm),stat=ier) |
|---|
| 4045 | ALLOCATE(humrel_daily_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 4046 | ALLOCATE(litterhum_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 4047 | ALLOCATE(t2m_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 4048 | ALLOCATE(t2m_min_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 4049 | ALLOCATE(tsurf_daily_fm_g(0,nsfm),stat=ier) |
|---|
| 4050 | ALLOCATE(tsoil_daily_fm_g(0,nslm,nsfm),stat=ier) |
|---|
| 4051 | ALLOCATE(soilhum_daily_fm_g(0,nslm,nsfm),stat=ier) |
|---|
| 4052 | ALLOCATE(precip_fm_g(0,nsfm),stat=ier) |
|---|
| 4053 | ALLOCATE(gpp_daily_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 4054 | ALLOCATE(veget_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 4055 | ALLOCATE(veget_max_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 4056 | ALLOCATE(lai_fm_g(0,nvm,nsfm),stat=ier) |
|---|
| 4057 | ENDIF ! is_root_proc |
|---|
| 4058 | |
|---|
| 4059 | IF (l_error) THEN |
|---|
| 4060 | WRITE(numout,*) 'Problem with memory allocation: forcing variables' |
|---|
| 4061 | STOP 'init_forcing' |
|---|
| 4062 | ENDIF |
|---|
| 4063 | |
|---|
| 4064 | !! 3. Initilaize variables |
|---|
| 4065 | |
|---|
| 4066 | CALL forcing_zero |
|---|
| 4067 | |
|---|
| 4068 | END SUBROUTINE init_forcing |
|---|
| 4069 | |
|---|
| 4070 | |
|---|
| 4071 | !! ================================================================================================================================ |
|---|
| 4072 | !! SUBROUTINE : forcing_zero |
|---|
| 4073 | !! |
|---|
| 4074 | !>\BRIEF Initialize variables containing the forcing data; variables are |
|---|
| 4075 | !! set to zero. |
|---|
| 4076 | !! |
|---|
| 4077 | !! DESCRIPTION : None |
|---|
| 4078 | !! |
|---|
| 4079 | !! RECENT CHANGE(S) : None |
|---|
| 4080 | !! |
|---|
| 4081 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 4082 | !! |
|---|
| 4083 | !! REFERENCES : None |
|---|
| 4084 | !! |
|---|
| 4085 | !! FLOWCHART : None |
|---|
| 4086 | !! \n |
|---|
| 4087 | !_ ================================================================================================================================ |
|---|
| 4088 | |
|---|
| 4089 | SUBROUTINE forcing_zero |
|---|
| 4090 | |
|---|
| 4091 | clay_fm(:,:) = zero |
|---|
| 4092 | humrel_daily_fm(:,:,:) = zero |
|---|
| 4093 | litterhum_daily_fm(:,:) = zero |
|---|
| 4094 | t2m_daily_fm(:,:) = zero |
|---|
| 4095 | t2m_min_daily_fm(:,:) = zero |
|---|
| 4096 | tsurf_daily_fm(:,:) = zero |
|---|
| 4097 | tsoil_daily_fm(:,:,:) = zero |
|---|
| 4098 | soilhum_daily_fm(:,:,:) = zero |
|---|
| 4099 | precip_fm(:,:) = zero |
|---|
| 4100 | gpp_daily_fm(:,:,:) = zero |
|---|
| 4101 | veget_fm(:,:,:) = zero |
|---|
| 4102 | veget_max_fm(:,:,:) = zero |
|---|
| 4103 | lai_fm(:,:,:) = zero |
|---|
| 4104 | |
|---|
| 4105 | END SUBROUTINE forcing_zero |
|---|
| 4106 | |
|---|
| 4107 | |
|---|
| 4108 | !! ================================================================================================================================ |
|---|
| 4109 | !! SUBROUTINE : forcing_write |
|---|
| 4110 | !! |
|---|
| 4111 | !>\BRIEF Appends data values to a netCDF file containing the forcing |
|---|
| 4112 | !! variables of the general processes in stomate. |
|---|
| 4113 | !! |
|---|
| 4114 | !! DESCRIPTION : None |
|---|
| 4115 | !! |
|---|
| 4116 | !! RECENT CHANGE(S) : None |
|---|
| 4117 | !! |
|---|
| 4118 | !! MAIN OUTPUT VARIABLE(S): netCDF file |
|---|
| 4119 | !! |
|---|
| 4120 | !! REFERENCES : None |
|---|
| 4121 | !! |
|---|
| 4122 | !! FLOWCHART : None |
|---|
| 4123 | !! \n |
|---|
| 4124 | !_ ================================================================================================================================ |
|---|
| 4125 | |
|---|
| 4126 | SUBROUTINE forcing_write(forcing_id,ibeg,iend) |
|---|
| 4127 | |
|---|
| 4128 | !! 0. Variable and parameter declaration |
|---|
| 4129 | |
|---|
| 4130 | !! 0.1 Input variables |
|---|
| 4131 | |
|---|
| 4132 | INTEGER(i_std),INTENT(in) :: forcing_id !! File identifer of forcing file, assigned when netcdf is created |
|---|
| 4133 | INTEGER(i_std),INTENT(in) :: ibeg, iend !! First and last time step to be written |
|---|
| 4134 | |
|---|
| 4135 | !! 0.2 Output variables |
|---|
| 4136 | |
|---|
| 4137 | !! 0.3 Modified variables |
|---|
| 4138 | |
|---|
| 4139 | !! 0.4 Local variables |
|---|
| 4140 | |
|---|
| 4141 | INTEGER(i_std) :: ii !! Index of isf where isf is the number of time steps that can be |
|---|
| 4142 | !! stored in memory |
|---|
| 4143 | INTEGER(i_std) :: iblocks !! Index of block that is written |
|---|
| 4144 | INTEGER(i_std) :: nblocks !! Number of blocks that needs to be written |
|---|
| 4145 | INTEGER(i_std) :: ier !! Check errors in netcdf call |
|---|
| 4146 | INTEGER(i_std),DIMENSION(0:2) :: ifirst !! First block in memory - changes with iblocks |
|---|
| 4147 | INTEGER(i_std),DIMENSION(0:2) :: ilast !! Last block in memory - changes with iblocks |
|---|
| 4148 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions |
|---|
| 4149 | INTEGER(i_std),DIMENSION(ndm) :: start !! First block to write |
|---|
| 4150 | INTEGER(i_std) :: ndim !! Dimensions of forcing to be added to the netCDF |
|---|
| 4151 | INTEGER(i_std),DIMENSION(ndm) :: count_force !! Number of elements in each dimension |
|---|
| 4152 | INTEGER(i_std) :: vid !! Variable identifer of netCDF |
|---|
| 4153 | !_ ================================================================================================================================ |
|---|
| 4154 | |
|---|
| 4155 | !! 1. Determine number of blocks of forcing variables that are stored in memory |
|---|
| 4156 | |
|---|
| 4157 | nblocks = 0 |
|---|
| 4158 | ifirst(:) = 1 |
|---|
| 4159 | ilast(:) = 1 |
|---|
| 4160 | DO ii = ibeg, iend |
|---|
| 4161 | IF ( (nblocks /= 0) & |
|---|
| 4162 | & .AND.(isf(ii) == isf(ilast(nblocks))+1)) THEN |
|---|
| 4163 | ! Last block found |
|---|
| 4164 | ilast(nblocks) = ii |
|---|
| 4165 | ELSE |
|---|
| 4166 | ! First block found |
|---|
| 4167 | nblocks = nblocks+1 |
|---|
| 4168 | IF (nblocks > 2) STOP 'Problem in forcing_write' |
|---|
| 4169 | ifirst(nblocks) = ii |
|---|
| 4170 | ilast(nblocks) = ii |
|---|
| 4171 | ENDIF |
|---|
| 4172 | ENDDO |
|---|
| 4173 | |
|---|
| 4174 | !! 2. Gather distributed variables (parallel computing) |
|---|
| 4175 | |
|---|
| 4176 | CALL gather(clay_fm,clay_fm_g) |
|---|
| 4177 | CALL gather(humrel_daily_fm,humrel_daily_fm_g) |
|---|
| 4178 | CALL gather(litterhum_daily_fm,litterhum_daily_fm_g) |
|---|
| 4179 | CALL gather(t2m_daily_fm,t2m_daily_fm_g) |
|---|
| 4180 | CALL gather(t2m_min_daily_fm,t2m_min_daily_fm_g) |
|---|
| 4181 | CALL gather(tsurf_daily_fm,tsurf_daily_fm_g) |
|---|
| 4182 | CALL gather(tsoil_daily_fm,tsoil_daily_fm_g) |
|---|
| 4183 | CALL gather(soilhum_daily_fm,soilhum_daily_fm_g) |
|---|
| 4184 | CALL gather(precip_fm,precip_fm_g) |
|---|
| 4185 | CALL gather(gpp_daily_fm,gpp_daily_fm_g) |
|---|
| 4186 | CALL gather(veget_fm,veget_fm_g) |
|---|
| 4187 | CALL gather(veget_max_fm,veget_max_fm_g) |
|---|
| 4188 | CALL gather(lai_fm,lai_fm_g) |
|---|
| 4189 | |
|---|
| 4190 | !! 3. Append data to netCDF file |
|---|
| 4191 | |
|---|
| 4192 | IF (is_root_prc) THEN |
|---|
| 4193 | ! The netCDF file has been created earlier in this module, a file ID is available |
|---|
| 4194 | ! and variables and dimensions have already been defined |
|---|
| 4195 | DO iblocks = 1, nblocks |
|---|
| 4196 | IF (ifirst(iblocks) /= ilast(iblocks)) THEN |
|---|
| 4197 | ndim = 2 |
|---|
| 4198 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4199 | count_force(1:ndim) = SHAPE(clay_fm_g) |
|---|
| 4200 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4201 | ier = NF90_INQ_VARID (forcing_id,'clay',vid) |
|---|
| 4202 | ier = NF90_PUT_VAR (forcing_id,vid, & |
|---|
| 4203 | & clay_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4204 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4205 | ndim = 3; |
|---|
| 4206 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4207 | count_force(1:ndim) = SHAPE(humrel_daily_fm_g) |
|---|
| 4208 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4209 | ier = NF90_INQ_VARID (forcing_id,'humrel',vid) |
|---|
| 4210 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4211 | & humrel_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4212 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4213 | ndim = 2; |
|---|
| 4214 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4215 | count_force(1:ndim) = SHAPE(litterhum_daily_fm_g) |
|---|
| 4216 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4217 | ier = NF90_INQ_VARID (forcing_id,'litterhum',vid) |
|---|
| 4218 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4219 | & litterhum_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4220 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4221 | ndim = 2; |
|---|
| 4222 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4223 | count_force(1:ndim) = SHAPE(t2m_daily_fm_g) |
|---|
| 4224 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4225 | ier = NF90_INQ_VARID (forcing_id,'t2m',vid) |
|---|
| 4226 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4227 | & t2m_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4228 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4229 | ndim = 2; |
|---|
| 4230 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4231 | count_force(1:ndim) = SHAPE(t2m_min_daily_fm_g) |
|---|
| 4232 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4233 | ier = NF90_INQ_VARID (forcing_id,'t2m_min',vid) |
|---|
| 4234 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4235 | & t2m_min_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4236 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4237 | ndim = 2; |
|---|
| 4238 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4239 | count_force(1:ndim) = SHAPE(tsurf_daily_fm_g) |
|---|
| 4240 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4241 | ier = NF90_INQ_VARID (forcing_id,'tsurf',vid) |
|---|
| 4242 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4243 | & tsurf_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4244 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4245 | ndim = 3; |
|---|
| 4246 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4247 | count_force(1:ndim) = SHAPE(tsoil_daily_fm_g) |
|---|
| 4248 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4249 | ier = NF90_INQ_VARID (forcing_id,'tsoil',vid) |
|---|
| 4250 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4251 | & tsoil_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4252 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4253 | ndim = 3; |
|---|
| 4254 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4255 | count_force(1:ndim) = SHAPE(soilhum_daily_fm_g) |
|---|
| 4256 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4257 | ier = NF90_INQ_VARID (forcing_id,'soilhum',vid) |
|---|
| 4258 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4259 | & soilhum_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4260 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4261 | ndim = 2; |
|---|
| 4262 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4263 | count_force(1:ndim) = SHAPE(precip_fm_g) |
|---|
| 4264 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4265 | ier = NF90_INQ_VARID (forcing_id,'precip',vid) |
|---|
| 4266 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4267 | & precip_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4268 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4269 | ndim = 3; |
|---|
| 4270 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4271 | count_force(1:ndim) = SHAPE(gpp_daily_fm_g) |
|---|
| 4272 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4273 | ier = NF90_INQ_VARID (forcing_id,'gpp',vid) |
|---|
| 4274 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4275 | & gpp_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4276 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4277 | ndim = 3; |
|---|
| 4278 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4279 | count_force(1:ndim) = SHAPE(veget_fm_g) |
|---|
| 4280 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4281 | ier = NF90_INQ_VARID (forcing_id,'veget',vid) |
|---|
| 4282 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4283 | & veget_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4284 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4285 | ndim = 3; |
|---|
| 4286 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4287 | count_force(1:ndim) = SHAPE(veget_max_fm_g) |
|---|
| 4288 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4289 | ier = NF90_INQ_VARID (forcing_id,'veget_max',vid) |
|---|
| 4290 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4291 | & veget_max_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4292 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4293 | ndim = 3; |
|---|
| 4294 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4295 | count_force(1:ndim) = SHAPE(lai_fm_g) |
|---|
| 4296 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4297 | ier = NF90_INQ_VARID (forcing_id,'lai',vid) |
|---|
| 4298 | ier = NF90_PUT_VAR (forcing_id, vid, & |
|---|
| 4299 | & lai_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4300 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4301 | ENDIF |
|---|
| 4302 | ENDDO |
|---|
| 4303 | ENDIF |
|---|
| 4304 | |
|---|
| 4305 | !! 4. Adjust flag of forcing file |
|---|
| 4306 | nf_written(isf(:)) = .TRUE. |
|---|
| 4307 | |
|---|
| 4308 | END SUBROUTINE forcing_write |
|---|
| 4309 | |
|---|
| 4310 | |
|---|
| 4311 | !! ================================================================================================================================ |
|---|
| 4312 | !! SUBROUTINE : stomate_forcing_read |
|---|
| 4313 | !! |
|---|
| 4314 | !>\BRIEF Read forcing file. |
|---|
| 4315 | !! |
|---|
| 4316 | !! DESCRIPTION : None |
|---|
| 4317 | !! |
|---|
| 4318 | !! RECENT CHANGE(S) : None |
|---|
| 4319 | !! |
|---|
| 4320 | !! MAIN OUTPUT VARIABLE(S): None |
|---|
| 4321 | !! |
|---|
| 4322 | !! REFERENCES : None |
|---|
| 4323 | !! |
|---|
| 4324 | !! FLOWCHART : None |
|---|
| 4325 | !! \n |
|---|
| 4326 | !_ ================================================================================================================================ |
|---|
| 4327 | |
|---|
| 4328 | SUBROUTINE stomate_forcing_read(forcing_id,nsfm) |
|---|
| 4329 | |
|---|
| 4330 | !! 0. Variable and parameter declaration |
|---|
| 4331 | |
|---|
| 4332 | !! 0.1 Input variables |
|---|
| 4333 | |
|---|
| 4334 | INTEGER(i_std),INTENT(in) :: forcing_id !! File identifer of forcing file, assigned when netcdf is created |
|---|
| 4335 | INTEGER(i_std),INTENT(in) :: nsfm !! Number of time steps stored in memory |
|---|
| 4336 | |
|---|
| 4337 | !! 0.2 Output variables |
|---|
| 4338 | |
|---|
| 4339 | !! 0.3 Modified variables |
|---|
| 4340 | |
|---|
| 4341 | !! 0.4 Local variables |
|---|
| 4342 | |
|---|
| 4343 | INTEGER(i_std) :: ii !! Index of isf where isf is the number of time steps that can be stored in |
|---|
| 4344 | !! memory |
|---|
| 4345 | INTEGER(i_std) :: iblocks !! Index of block that is written |
|---|
| 4346 | INTEGER(i_std) :: nblocks !! Number of blocks that needs to be written |
|---|
| 4347 | INTEGER(i_std) :: ier !! Check error of netcdf call |
|---|
| 4348 | INTEGER(i_std),DIMENSION(0:2) :: ifirst !! First block in memory - changes with iblocks |
|---|
| 4349 | INTEGER(i_std),DIMENSION(0:2) :: ilast !! Last block in memory - changes with iblocks |
|---|
| 4350 | INTEGER(i_std),PARAMETER :: ndm = 10 !! Maximum number of dimensions |
|---|
| 4351 | INTEGER(i_std),DIMENSION(ndm) :: start !! First block to write |
|---|
| 4352 | INTEGER(i_std) :: ndim !! Dimensions of forcing to be added to the netCDF |
|---|
| 4353 | INTEGER(i_std),DIMENSION(ndm) :: count_force !! Number of elements in each dimension |
|---|
| 4354 | INTEGER(i_std) :: vid !! Variable identifer of netCDF |
|---|
| 4355 | LOGICAL :: a_er=.FALSE. !! Error catching from netcdf file |
|---|
| 4356 | !_ ================================================================================================================================ |
|---|
| 4357 | |
|---|
| 4358 | IF (printlev >= 4) WRITE(numout,*) "stomate_forcing_read " |
|---|
| 4359 | |
|---|
| 4360 | !! 1. Set to zero if the corresponding forcing state |
|---|
| 4361 | |
|---|
| 4362 | ! has not yet been written into the file |
|---|
| 4363 | DO ii = 1, nsfm |
|---|
| 4364 | IF (.NOT.nf_written(isf(ii))) THEN |
|---|
| 4365 | clay_fm(:,ii) = zero |
|---|
| 4366 | humrel_daily_fm(:,:,ii) = zero |
|---|
| 4367 | litterhum_daily_fm(:,ii) = zero |
|---|
| 4368 | t2m_daily_fm(:,ii) = zero |
|---|
| 4369 | t2m_min_daily_fm(:,ii) = zero |
|---|
| 4370 | tsurf_daily_fm(:,ii) = zero |
|---|
| 4371 | tsoil_daily_fm(:,:,ii) = zero |
|---|
| 4372 | soilhum_daily_fm(:,:,ii) = zero |
|---|
| 4373 | precip_fm(:,ii) = zero |
|---|
| 4374 | gpp_daily_fm(:,:,ii) = zero |
|---|
| 4375 | veget_fm(:,:,ii) = zero |
|---|
| 4376 | veget_max_fm(:,:,ii) = zero |
|---|
| 4377 | lai_fm(:,:,ii) = zero |
|---|
| 4378 | ENDIF |
|---|
| 4379 | ENDDO |
|---|
| 4380 | |
|---|
| 4381 | !! 2. determine blocks of forcing states that are contiguous in memory |
|---|
| 4382 | |
|---|
| 4383 | nblocks = 0 |
|---|
| 4384 | ifirst(:) = 1 |
|---|
| 4385 | ilast(:) = 1 |
|---|
| 4386 | |
|---|
| 4387 | DO ii = 1, nsfm |
|---|
| 4388 | IF (nf_written(isf(ii))) THEN |
|---|
| 4389 | IF ( (nblocks /= 0) & |
|---|
| 4390 | & .AND.(isf(ii) == isf(ilast(nblocks))+1)) THEN |
|---|
| 4391 | |
|---|
| 4392 | ! element is contiguous with last element found |
|---|
| 4393 | ilast(nblocks) = ii |
|---|
| 4394 | ELSE |
|---|
| 4395 | |
|---|
| 4396 | ! found first element of new block |
|---|
| 4397 | nblocks = nblocks+1 |
|---|
| 4398 | IF (nblocks > 2) STOP 'Problem in stomate_forcing_read' |
|---|
| 4399 | |
|---|
| 4400 | ifirst(nblocks) = ii |
|---|
| 4401 | ilast(nblocks) = ii |
|---|
| 4402 | ENDIF |
|---|
| 4403 | ENDIF |
|---|
| 4404 | ENDDO |
|---|
| 4405 | IF (printlev >= 4) WRITE(numout,*) "stomate_forcing_read nblocks, ifirst, ilast",nblocks, ifirst, ilast |
|---|
| 4406 | |
|---|
| 4407 | !! 3. Read variable values |
|---|
| 4408 | |
|---|
| 4409 | IF (is_root_prc) THEN |
|---|
| 4410 | DO iblocks = 1, nblocks |
|---|
| 4411 | IF (printlev >= 4) WRITE(numout,*) "stomate_forcing_read iblocks, ifirst(iblocks), ilast(iblocks)",iblocks, & |
|---|
| 4412 | ifirst(iblocks), ilast(iblocks) |
|---|
| 4413 | IF (ifirst(iblocks) /= ilast(iblocks)) THEN |
|---|
| 4414 | a_er=.FALSE. |
|---|
| 4415 | ndim = 2; |
|---|
| 4416 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4417 | count_force(1:ndim) = SHAPE(clay_fm_g) |
|---|
| 4418 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4419 | ier = NF90_INQ_VARID (forcing_id,'clay',vid) |
|---|
| 4420 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4421 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4422 | & clay_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4423 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4424 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4425 | |
|---|
| 4426 | ndim = 3; |
|---|
| 4427 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4428 | count_force(1:ndim) = SHAPE(humrel_daily_fm_g) |
|---|
| 4429 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4430 | ier = NF90_INQ_VARID (forcing_id,'humrel',vid) |
|---|
| 4431 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4432 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4433 | & humrel_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4434 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4435 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4436 | |
|---|
| 4437 | ndim = 2; |
|---|
| 4438 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4439 | count_force(1:ndim) = SHAPE(litterhum_daily_fm_g) |
|---|
| 4440 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4441 | ier = NF90_INQ_VARID (forcing_id,'litterhum',vid) |
|---|
| 4442 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4443 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4444 | & litterhum_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4445 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4446 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4447 | |
|---|
| 4448 | ndim = 2; |
|---|
| 4449 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4450 | count_force(1:ndim) = SHAPE(t2m_daily_fm_g) |
|---|
| 4451 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4452 | ier = NF90_INQ_VARID (forcing_id,'t2m',vid) |
|---|
| 4453 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4454 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4455 | & t2m_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4456 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4457 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4458 | |
|---|
| 4459 | ndim = 2; |
|---|
| 4460 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4461 | count_force(1:ndim) = SHAPE(t2m_min_daily_fm_g) |
|---|
| 4462 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4463 | ier = NF90_INQ_VARID (forcing_id,'t2m_min',vid) |
|---|
| 4464 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4465 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4466 | & t2m_min_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4467 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4468 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4469 | |
|---|
| 4470 | ndim = 2; |
|---|
| 4471 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4472 | count_force(1:ndim) = SHAPE(tsurf_daily_fm_g) |
|---|
| 4473 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4474 | ier = NF90_INQ_VARID (forcing_id,'tsurf',vid) |
|---|
| 4475 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4476 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4477 | & tsurf_daily_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4478 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4479 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4480 | |
|---|
| 4481 | ndim = 3; |
|---|
| 4482 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4483 | count_force(1:ndim) = SHAPE(tsoil_daily_fm_g) |
|---|
| 4484 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4485 | ier = NF90_INQ_VARID (forcing_id,'tsoil',vid) |
|---|
| 4486 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4487 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4488 | & tsoil_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4489 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4490 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4491 | |
|---|
| 4492 | ndim = 3; |
|---|
| 4493 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4494 | count_force(1:ndim) = SHAPE(soilhum_daily_fm_g) |
|---|
| 4495 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4496 | ier = NF90_INQ_VARID (forcing_id,'soilhum',vid) |
|---|
| 4497 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4498 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4499 | & soilhum_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4500 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4501 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4502 | |
|---|
| 4503 | ndim = 2; |
|---|
| 4504 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4505 | count_force(1:ndim) = SHAPE(precip_fm_g) |
|---|
| 4506 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4507 | ier = NF90_INQ_VARID (forcing_id,'precip',vid) |
|---|
| 4508 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4509 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4510 | & precip_fm_g(:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4511 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4512 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4513 | |
|---|
| 4514 | ndim = 3; |
|---|
| 4515 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4516 | count_force(1:ndim) = SHAPE(gpp_daily_fm_g) |
|---|
| 4517 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4518 | ier = NF90_INQ_VARID (forcing_id,'gpp',vid) |
|---|
| 4519 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4520 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4521 | & gpp_daily_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4522 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4523 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4524 | |
|---|
| 4525 | ndim = 3; |
|---|
| 4526 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4527 | count_force(1:ndim) = SHAPE(veget_fm_g) |
|---|
| 4528 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4529 | ier = NF90_INQ_VARID (forcing_id,'veget',vid) |
|---|
| 4530 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4531 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4532 | & veget_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4533 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4534 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4535 | |
|---|
| 4536 | ndim = 3; |
|---|
| 4537 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4538 | count_force(1:ndim) = SHAPE(veget_max_fm_g) |
|---|
| 4539 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4540 | ier = NF90_INQ_VARID (forcing_id,'veget_max',vid) |
|---|
| 4541 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4542 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4543 | & veget_max_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4544 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4545 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4546 | |
|---|
| 4547 | ndim = 3; |
|---|
| 4548 | start(1:ndim) = 1; start(ndim) = isf(ifirst(iblocks)); |
|---|
| 4549 | count_force(1:ndim) = SHAPE(lai_fm_g) |
|---|
| 4550 | count_force(ndim) = isf(ilast(iblocks))-isf(ifirst(iblocks))+1 |
|---|
| 4551 | ier = NF90_INQ_VARID (forcing_id,'lai',vid) |
|---|
| 4552 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4553 | ier = NF90_GET_VAR (forcing_id, vid, & |
|---|
| 4554 | & lai_fm_g(:,:,ifirst(iblocks):ilast(iblocks)), & |
|---|
| 4555 | & start=start(1:ndim), count=count_force(1:ndim)) |
|---|
| 4556 | a_er = a_er.OR.(ier /= 0) |
|---|
| 4557 | IF (a_er) THEN |
|---|
| 4558 | CALL ipslerr_p (3,'stomate_forcing_read', & |
|---|
| 4559 | & 'PROBLEM when read forcing file', & |
|---|
| 4560 | & '','') |
|---|
| 4561 | ENDIF |
|---|
| 4562 | |
|---|
| 4563 | ENDIF ! (ifirst(iblocks) /= ilast(iblocks)) |
|---|
| 4564 | ENDDO ! iblocks |
|---|
| 4565 | ENDIF ! is_root_prc |
|---|
| 4566 | |
|---|
| 4567 | !! 4. Distribute the variable over several processors |
|---|
| 4568 | |
|---|
| 4569 | CALL scatter(clay_fm_g,clay_fm) |
|---|
| 4570 | CALL scatter(humrel_daily_fm_g,humrel_daily_fm) |
|---|
| 4571 | CALL scatter(litterhum_daily_fm_g,litterhum_daily_fm) |
|---|
| 4572 | CALL scatter(t2m_daily_fm_g,t2m_daily_fm) |
|---|
| 4573 | CALL scatter(t2m_min_daily_fm_g,t2m_min_daily_fm) |
|---|
| 4574 | CALL scatter(tsurf_daily_fm_g,tsurf_daily_fm) |
|---|
| 4575 | CALL scatter(tsoil_daily_fm_g,tsoil_daily_fm) |
|---|
| 4576 | CALL scatter(soilhum_daily_fm_g,soilhum_daily_fm) |
|---|
| 4577 | CALL scatter(precip_fm_g,precip_fm) |
|---|
| 4578 | CALL scatter(gpp_daily_fm_g,gpp_daily_fm) |
|---|
| 4579 | CALL scatter(veget_fm_g,veget_fm) |
|---|
| 4580 | CALL scatter(veget_max_fm_g,veget_max_fm) |
|---|
| 4581 | CALL scatter(lai_fm_g,lai_fm) |
|---|
| 4582 | |
|---|
| 4583 | END SUBROUTINE stomate_forcing_read |
|---|
| 4584 | |
|---|
| 4585 | |
|---|
| 4586 | !! ================================================================================================================================ |
|---|
| 4587 | !! SUBROUTINE : setlai |
|---|
| 4588 | !! |
|---|
| 4589 | !>\BRIEF Routine to force the lai in STOMATE. The code in this routine |
|---|
| 4590 | !! simply CALCULATES lai and is therefore not functional. The routine should be |
|---|
| 4591 | !! rewritten if one wants to force lai. |
|---|
| 4592 | !! |
|---|
| 4593 | !! DESCRIPTION : None |
|---|
| 4594 | !! |
|---|
| 4595 | !! RECENT CHANGE(S) : None |
|---|
| 4596 | !! |
|---|
| 4597 | !! MAIN OUTPUT VARIABLE(S): ::lai |
|---|
| 4598 | !! |
|---|
| 4599 | !! REFERENCE(S) : None |
|---|
| 4600 | !! |
|---|
| 4601 | !! FLOWCHART : None |
|---|
| 4602 | !! \n |
|---|
| 4603 | !_ ================================================================================================================================ |
|---|
| 4604 | |
|---|
| 4605 | SUBROUTINE setlai(npts,lai) |
|---|
| 4606 | |
|---|
| 4607 | !! 0 Variable and parameter declaration |
|---|
| 4608 | |
|---|
| 4609 | !! 0.1 Input variables |
|---|
| 4610 | |
|---|
| 4611 | INTEGER(i_std),INTENT(in) :: npts !! Domain size - number of pixels (unitless) |
|---|
| 4612 | |
|---|
| 4613 | !! 0.2 Output variables |
|---|
| 4614 | |
|---|
| 4615 | REAL(r_std),DIMENSION(npts,nvm),INTENT(out) :: lai !! PFT leaf area index @tex $(m^{2} m^{-2})$ @endtex |
|---|
| 4616 | |
|---|
| 4617 | !! 0.3 Modified variables |
|---|
| 4618 | |
|---|
| 4619 | !! 0.4 Local variables |
|---|
| 4620 | |
|---|
| 4621 | INTEGER(i_std) :: j !! index (unitless) |
|---|
| 4622 | !_ ================================================================================================================================ |
|---|
| 4623 | |
|---|
| 4624 | !! 1. Set lai for bare soil to zero |
|---|
| 4625 | |
|---|
| 4626 | lai(:,ibare_sechiba) = zero |
|---|
| 4627 | |
|---|
| 4628 | !! 2. Multiply foliage biomass by sla to calculate lai for all PFTs and pixels |
|---|
| 4629 | |
|---|
| 4630 | DO j=2,nvm |
|---|
| 4631 | lai(:,j) = biomass(:,j,ileaf,icarbon)*sla(j) |
|---|
| 4632 | ENDDO |
|---|
| 4633 | |
|---|
| 4634 | END SUBROUTINE setlai |
|---|
| 4635 | |
|---|
| 4636 | END MODULE stomate |
|---|
