1 | ! ================================================================================================================================= |
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2 | ! MODULE : stomate_litter |
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3 | ! |
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4 | ! CONTACT : orchidee-help _at_ ipsl.jussieu.fr |
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5 | ! |
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6 | ! LICENCE : IPSL (2006) |
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7 | ! This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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8 | ! |
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9 | !>\BRIEF Update litter and lignine content after litter fall and |
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10 | !! calculating litter decomposition. |
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11 | !! |
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12 | !!\n DESCRIPTION: None |
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13 | !! |
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14 | !! RECENT CHANGE(S): None |
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15 | !! |
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16 | !! REFERENCE(S) : None |
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17 | !! |
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18 | !! SVN : |
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19 | !! $HeadURL$ |
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20 | !! $Date$ |
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21 | !! $Revision$ |
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22 | !! \n |
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23 | !_ ================================================================================================================================ |
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24 | |
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25 | MODULE stomate_litter |
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26 | |
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27 | ! modules used: |
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28 | |
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29 | USE ioipsl_para |
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30 | USE stomate_data |
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31 | USE constantes |
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32 | USE constantes_soil |
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33 | USE pft_parameters |
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34 | |
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35 | IMPLICIT NONE |
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36 | |
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37 | ! private & public routines |
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38 | |
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39 | PRIVATE |
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40 | PUBLIC littercalc,littercalc_clear, deadleaf |
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41 | |
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42 | |
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43 | |
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44 | LOGICAL, SAVE :: firstcall = .TRUE. !! first call |
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45 | !$OMP THREADPRIVATE(firstcall) |
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46 | |
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47 | CONTAINS |
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48 | |
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49 | !! ================================================================================================================================ |
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50 | !! SUBROUTINE : littercalc_calc |
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51 | !! |
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52 | !!\BRIEF Set the flag ::firstcall to .TRUE. and as such activate section |
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53 | !! 1.1 of the subroutine littercalc (see below). |
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54 | !! |
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55 | !! DESCRIPTION : None |
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56 | !! |
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57 | !! RECENT CHANGE(S) : None |
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58 | !! |
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59 | !! MAIN OUTPUT VARIABLE(S) : None |
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60 | !! |
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61 | !! REFERENCE(S) : None |
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62 | !! |
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63 | !! FLOWCHART : None |
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64 | !! \n |
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65 | !_ ================================================================================================================================ |
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66 | |
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67 | SUBROUTINE littercalc_clear |
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68 | firstcall =.TRUE. |
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69 | END SUBROUTINE littercalc_clear |
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70 | |
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71 | |
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72 | !! ================================================================================================================================ |
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73 | !! SUBROUTINE : littercalc |
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74 | !! |
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75 | !!\BRIEF Calculation of the litter decomposition and therefore of the |
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76 | !! heterotrophic respiration from litter following Parton et al. (1987). |
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77 | !! |
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78 | !! DESCRIPTION : The littercal routine splits the litter in 4 pools: |
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79 | !! aboveground metaboblic, aboveground structural, belowground metabolic and |
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80 | !! belowground structural. the fraction (F) of plant material going to metabolic |
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81 | !! and structural is defined following Parton et al. (1987). The below ground |
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82 | !! litter is discretized over 11 layers (the same used by the CWRR hydrology |
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83 | !! scheme). |
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84 | !! \latexonly |
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85 | !! \input{littercalc1.tex} |
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86 | !! \endlatexonly |
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87 | !! \n |
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88 | !! where L is the lignin content of the plant carbon pools considered and CN |
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89 | !! its CN ratio. L and CN are fixed parameters for each plant carbon pools, |
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90 | !! therefore it is the ratio between each plant carbon pool within a PFT, which |
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91 | !! controlled the part of the total litter, that will be considered as |
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92 | !! recalcitrant (i.e. structural litter) or labile (i.e. metabolic litter).\n |
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93 | !! |
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94 | !! The routine calculates the fraction of aboveground litter which is metabolic |
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95 | !! or structural (the litterpart variable) which is then used in lpj_fire.f90.\n |
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96 | !! |
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97 | !! In the section 2, the routine calculate the new plant material entering the |
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98 | !! litter pools by phenological death of plants organs (corresponding to the |
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99 | !! variable turnover) and by fire, herbivory and others non phenological causes |
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100 | !! (variable bm_to_litter). This calculation is first done for each PFT and then |
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101 | !! the values calculated for each PFT are added up. Following the same approach |
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102 | !! the lignin content of the total structural litter is calculated and will be |
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103 | !! then used as a factor control of the decomposition of the structural litter |
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104 | !! (lignin_struc) in the section 5.1.2. A test is performed to avoid that we add |
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105 | !! more lignin than structural litter. Finally, the variable litterpart is |
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106 | !! updated.\n |
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107 | !! |
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108 | !! In the section 3 and 4 the temperature and the moisture controlling the |
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109 | !! decomposition are calculated for above and belowground. For aboveground |
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110 | !! litter, air temperature and litter moisture are calculated in sechiba and used |
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111 | !! directly. For belowground, soil temperature and moisture are also calculated |
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112 | !! in sechiba but are modulated as a function of the soil depth. The modulation |
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113 | !! is a multiplying factor exponentially distributed between 0 (in depth) and 1 |
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114 | !! in surface.\n |
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115 | !! |
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116 | !! Then, in the section 5 and 6, the routine calculates the structural litter decomposition |
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117 | !! (C) following first order kinetics following Parton et al. (1987). |
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118 | !! \latexonly |
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119 | !! \input{littercalc2.tex} |
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120 | !! \endlatexonly |
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121 | !! \n |
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122 | !! with k the decomposition rate of the structural litter. |
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123 | !! k corresponds to |
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124 | !! \latexonly |
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125 | !! \input{littercalc3.tex} |
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126 | !! \endlatexonly |
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127 | !! \n |
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128 | !! with littertau the turnover rate, T a function of the temperature and M a function of |
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129 | !! the moisture described below.\n |
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130 | !! |
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131 | !! Then, the fraction of dead leaves (DL) composed by aboveground structural litter is |
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132 | !! calculated as following |
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133 | !! \latexonly |
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134 | !! \input{littercalc4.tex} |
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135 | !! \endlatexonly |
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136 | !! \n |
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137 | !! with k the decomposition rate of the structural litter previously |
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138 | !! described.\n |
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139 | !! |
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140 | !! In the section 5.1 and 6.1, the fraction of decomposed structural litter |
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141 | !! incorporated to the soil (Input) and its associated heterotrophic respiration are |
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142 | !! calculated. For structural litter, the C decomposed could go in the active |
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143 | !! soil carbon pool or in the slow carbon, as described in |
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144 | !! stomate_soilcarbon.f90.\n |
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145 | !! \latexonly |
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146 | !! \input{littercalc5.tex} |
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147 | !! \endlatexonly |
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148 | !! \n |
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149 | !! with f a parameter describing the fraction of structural litter incorporated |
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150 | !! into the considered soil carbon pool, C the amount of litter decomposed and L |
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151 | !! the amount of lignin in the litter. The litter decomposed which is not |
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152 | !! incorporated into the soil is respired.\n |
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153 | !! |
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154 | !! In the section 5.2 and 6.2, the fraction of decomposed metabolic litter |
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155 | !! incorporated to the soil and its associated heterotrophic respiration are |
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156 | !! calculated with the same approaches presented for 5.1 but no control factor |
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157 | !! depending on the lignin content are used.\n |
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158 | !! |
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159 | !! In the section 7 the dead leaf cover is calculated through a call to the |
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160 | !! deadleaf subroutine presented below.\n |
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161 | !! |
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162 | !! MAIN OUTPUT VARIABLES: ::deadleaf_cover, ::resp_hetero_litter, |
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163 | !! ::control_temp, ::control_moist |
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164 | !! |
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165 | !! REFERENCES: |
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166 | !! - Parton, WJ, Schimel, DS, Cole, CV, and Ojima, DS. 1987. Analysis |
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167 | !! of factors controlling soil organic matter levels in Great Plains |
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168 | !! grasslands. Soil Science Society of America journal (USA) |
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169 | !! (51):1173-1179. |
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170 | !! - Lardy, R, et al., A new method to determine soil organic carbon equilibrium, |
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171 | !! Environmental Modelling & Software (2011), doi:10.1016|j.envsoft.2011.05.016 |
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172 | !! |
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173 | !! FLOWCHART : |
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174 | !! \latexonly |
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175 | !! \includegraphics(scale=0.5){littercalcflow.jpg} |
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176 | !! \endlatexonly |
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177 | !! \n |
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178 | !_ ================================================================================================================================ |
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179 | |
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180 | SUBROUTINE littercalc (npts, dt, & |
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181 | turnover, bm_to_litter, Cinp_manure_solid, & |
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182 | veget_max, tsurf, tsoil, soilhum, litterhum, rprof, & |
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183 | litterpart, litter_above, litter_below, dead_leaves, & |
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184 | lignin_struc_above, lignin_struc_below, & |
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185 | deadleaf_cover, resp_hetero_litter, resp_hetero_flood, & |
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186 | control_temp_above, control_temp_soil, & |
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187 | control_moist_above, control_moist_soil, & |
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188 | litter_mc,soilcarbon_input, floodcarbon_input, soil_mc, soiltile, & |
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189 | clay, bulk_dens, soil_ph, poor_soils, carbon, flood_frac) |
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190 | |
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191 | !! 0. Variable and parameter declaration |
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192 | |
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193 | !! 0.1 Input variables |
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194 | |
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195 | INTEGER(i_std), INTENT(in) :: npts !! Domain size - number of grid pixels |
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196 | REAL(r_std), INTENT(in) :: dt !! Time step of the simulations for stomate |
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197 | !! @tex $(dtradia one\_day^{-1})$ @endtex |
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198 | REAL(r_std), DIMENSION(npts,nvm,nparts,nelements), INTENT(in) :: turnover !! Turnover rates of plant biomass |
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199 | !! @tex $(gC m^{-2} dt\_slow^{-1})$ @endtex |
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200 | REAL(r_std), DIMENSION(npts,nvm,nparts,nelements), INTENT(in) :: bm_to_litter !! Conversion of biomass to litter |
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201 | !! @tex $(gC m^{-2} dt\_slow^{-1})$ @endtex |
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202 | REAL(r_std),DIMENSION(npts,nvm),INTENT(in) :: veget_max !! PFT "Maximal" coverage fraction of a PFT |
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203 | !! defined in the input vegetation map |
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204 | !! @tex $(m^2 m^{-2})$ @endtex |
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205 | REAL(r_std),DIMENSION(npts,nvm),INTENT(in) :: Cinp_manure_solid !! Solid manure-C input (metabolic litter-C, gC.m^{-2} dt{-1}) |
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206 | !! @tex $(gC m^{-2} dt\_slow^{-1})$ @endtex |
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207 | REAL(r_std), DIMENSION(npts), INTENT(in) :: tsurf !! Temperature (K) at the surface |
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208 | REAL(r_std), DIMENSION(npts,nslm), INTENT(in) :: tsoil !! Soil temperature (K) |
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209 | REAL(r_std), DIMENSION(npts,nslm), INTENT(in) :: soilhum !! Daily soil humidity of each soil layer |
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210 | !! (unitless) |
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211 | REAL(r_std), DIMENSION(npts), INTENT(in) :: litterhum !! Daily litter humidity (unitless) |
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212 | REAL(r_std), DIMENSION(npts,nvm), INTENT(in) :: rprof !! PFT root depth as calculated in stomate.f90 from parameter |
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213 | !! humcste which is root profile for different PFTs |
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214 | !! in slowproc.f90 (m) |
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215 | REAL(r_std),DIMENSION (npts,nstm), INTENT(in) :: litter_mc !! soil moisture content \f($m^3 \times m^3$)\f |
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216 | REAL(r_std),DIMENSION (npts,nslm,nstm), INTENT(in) :: soil_mc !! soil moisture content \f($m^3 \times m^3$)\f |
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217 | REAL(r_std),DIMENSION (npts,nstm), INTENT (in) :: soiltile !! Fraction of each soil tile (0-1, unitless) |
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218 | REAL(r_std), DIMENSION(npts), INTENT(in) :: clay !! Clay fraction (unitless, 0-1) |
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219 | REAL(r_std), DIMENSION(npts), INTENT(inout) :: bulk_dens !! Variable local of bulk density for the moment must change in the futur (kg m-3) |
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220 | |
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221 | REAL(r_std), DIMENSION(npts), INTENT(in) :: soil_ph !! soil pH (pH unit, 0-14) |
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222 | REAL(r_std), DIMENSION(npts), INTENT(in) :: poor_soils !! Fraction of poor soils (0-1) |
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223 | REAL(r_std), DIMENSION(npts,ncarb,nvm,nslmd), INTENT(in) :: carbon !! Soil carbon pools: active, slow, or passive, \f$(gC m^{2})$\f |
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224 | REAL(r_std), DIMENSION(npts), INTENT(in) :: flood_frac !! flooded fraction, needed to calculate heterotrophic respiration input to floodplain |
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225 | !! 0.2 Output variables |
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226 | |
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227 | REAL(r_std), DIMENSION(npts), INTENT(out) :: deadleaf_cover !! Fraction of soil covered by dead leaves |
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228 | !! over all PFTs (0-1, unitless) |
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229 | REAL(r_std), DIMENSION(npts,nvm), INTENT(out) :: resp_hetero_litter !! Litter heterotrophic respiration. The unit |
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230 | !! is given by m^2 of ground. |
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231 | !! @tex $(gC dtradia one\_day^{-1}) m^{-2})$ @endtex |
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232 | REAL(r_std), DIMENSION(npts,nvm), INTENT(out) :: resp_hetero_flood !! Litter heterotrophic respiration in flooded areas. |
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233 | !! The unit is given by m^2 of ground. |
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234 | !! @tex $(gC dtradia one\_day^{-1}) m^{-2})$ @endtex |
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235 | REAL(r_std), DIMENSION(npts,nslmd,npool*2), INTENT(out) :: control_temp_soil !! Temperature control of heterotrophic |
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236 | !! respiration belowground,(0-1, unitless) |
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237 | REAL(r_std), DIMENSION(npts,nslmd,nvm), INTENT(out) :: control_moist_soil !! Moisture control of heterotrophic |
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238 | !! respiration aboveground(0.25-1,unitless) |
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239 | REAL(r_std), DIMENSION(npts,nlitt), INTENT(out) :: control_temp_above !! Temperature control of heterotrophic |
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240 | !! respiration, above (0-1, |
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241 | !! unitless) |
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242 | REAL(r_std), DIMENSION(npts,nvm), INTENT(out) :: control_moist_above!! Moisture control of heterotrophic |
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243 | !! respiration aboveground(0.25-1, unitless) |
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244 | |
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245 | !! 0.3 Modified variables |
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246 | |
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247 | REAL(r_std), DIMENSION(npts,nvm,nlitt), INTENT(inout) :: litterpart !! Fraction of litter above the ground |
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248 | !! belonging to the different PFTs (0-1, |
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249 | !! unitless) |
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250 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nelements), INTENT(inout) :: litter_above !! Metabolic and structural litter,above ground |
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251 | !! The unit is given by m^2 of |
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252 | !! ground @tex $(gC m^{-2})$ @endtex |
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253 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslmd,nelements), INTENT(inout) ::litter_below !! Metabolic and structural litter, below ground |
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254 | !! The unit is given by m^2 of |
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255 | !! ground @tex $(gC m^{-2} $ @endtex |
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256 | REAL(r_std), DIMENSION(npts,nvm,nlitt), INTENT(inout) :: dead_leaves !! Dead leaves per ground unit area, per PFT, |
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257 | !! metabolic and structural in |
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258 | !! @tex $(gC m^{-2})$ @endtex |
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259 | REAL(r_std), DIMENSION(npts,nvm), INTENT(inout) :: lignin_struc_above !! Ratio Lignin content in structural litter, |
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260 | !! above ground, (0-1, unitless) |
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261 | REAL(r_std), DIMENSION(npts,nvm,nslmd), INTENT(inout) :: lignin_struc_below !! Ratio Lignin content in structural litter, |
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262 | !! below ground, (0-1, unitless) |
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263 | REAL(r_std), DIMENSION(npts,nvm,nslmd,npool,nelements), INTENT(inout) :: soilcarbon_input !! Dissolved Organic Carbon input from litter decomposition |
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264 | !! The unit is given by m^2 |
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265 | !! @tex $(gC m^{-2})$ @endtex |
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266 | REAL(r_std), DIMENSION(npts,nvm,npool,nelements), INTENT(inout) :: floodcarbon_input !! Dissolved Organic Carbon input from litter |
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267 | !! decomposition in flooded areas |
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268 | !! The unit is given by m^2 |
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269 | !! @tex $(gC m^{-2})$ @endtex |
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270 | !! 0.4 Local variables |
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271 | |
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272 | REAL(r_std), DIMENSION(npts,nvm) :: control_flood_above!! Moisture control of heterotrophic |
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273 | !! respiration aboveground(0.25-1, unitless) |
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274 | !$OMP THREADPRIVATE(control_flood_above) |
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275 | REAL(r_std), SAVE, DIMENSION(nparts,nlitt) :: litterfrac !! The fraction of leaves, wood, etc. that |
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276 | !! goes into metabolic and structural |
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277 | !! litterpools (0-1, unitless) |
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278 | REAL(r_std), DIMENSION(npts,nparts,nlitt) :: litterfrac_pxl !! The fraction of leaves, wood, etc. that |
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279 | !! goes into metabolic and structural |
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280 | !! litterpools (0-1, unitless) |
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281 | !$OMP THREADPRIVATE(litterfrac) |
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282 | REAL(r_std),DIMENSION(0:nslm) :: z_soil !! Soil levels (m) |
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283 | !$OMP THREADPRIVATE(z_soil) |
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284 | !! profiles (unitless) |
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285 | REAL(r_std), SAVE, DIMENSION(nlitt) :: litter_tau !! Turnover time in litter pools (days) |
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286 | !$OMP THREADPRIVATE(litter_tau) |
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287 | REAL(r_std), SAVE, DIMENSION(npool) :: pool_tau !! Turnover time in litter and soil carbon pools (days) |
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288 | !$OMP THREADPRIVATE(pool_tau) |
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289 | REAL(r_std), SAVE, DIMENSION(npool) :: DOC_tau !! Residence time of DOC (days) |
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290 | !$OMP THREADPRIVATE(DOC_tau) |
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291 | REAL(r_std), SAVE, DIMENSION(nlitt,ncarb,nlevs) :: frac_soil !! Fraction of litter that goes into soil |
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292 | !! (litter -> carbon, above and below). The |
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293 | !! remaining part goes to the atmosphere |
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294 | !$OMP THREADPRIVATE(frac_soil) |
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295 | REAL(r_std), DIMENSION(npts) :: tsoil_decomp !! Temperature used for decompostition in |
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296 | !! soil (K) |
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297 | REAL(r_std), DIMENSION(npts) :: soilhum_decomp !! Humidity used for decompostition in soil |
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298 | !! (unitless) |
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299 | ! REAL(r_std), SAVE, DIMENSION(npts) :: z_lit !! Thickness of the above ground litter layer (mm) |
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300 | !!$OMP THREADPRIVATE(z_lit) |
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301 | |
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302 | REAL(r_std), DIMENSION(npts) :: fd !! Fraction of structural or metabolic litter |
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303 | !! decomposed (unitless) |
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304 | REAL(r_std), DIMENSION(npts,nelements) :: qd !! Quantity of structural or metabolic litter |
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305 | !! decomposed @tex $(gC m^{-2})$ @endtex |
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306 | REAL(r_std), DIMENSION(npts,nelements) :: qd_flood !! Quantity of structural or metabolic litter |
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307 | !! decomposed in flooded areas @tex $(gC m^{-2})$ @endtex |
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308 | REAL(r_std), DIMENSION(npts,nvm) :: old_struc_above !! Old structural litter, above ground |
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309 | !! @tex $(gC m^{-2})$ @endtex |
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310 | REAL(r_std), DIMENSION(npts,nvm,nslmd) :: old_struc_below !! Old structural litter, below ground |
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311 | !! @tex $(gC m^{-2})$ @endtex |
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312 | REAL(r_std), DIMENSION(npts,nvm,nlitt, nelements) :: litter_inc_PFT_above !! Increase of litter, per PFT, metabolic and |
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313 | !! structural, above ground. The |
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314 | !! unit is given by m^2 of ground. |
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315 | !! @tex $(gC m^{-2})$ @endtex |
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316 | REAL(r_std), DIMENSION(npts,nvm,nlitt,nslm,nelements) :: litter_inc_PFT_below !! Increase of litter, per PFT, metabolic and |
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317 | !! structural, above ground. The |
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318 | !!unit is given by m^2 of ground. |
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319 | !! @tex $(gC m^{-2})$ @endtex |
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320 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nelements) :: litter_inc_above !! Increase of metabolic and structural |
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321 | !! litter, above ground. The unit |
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322 | !! is given by m^2 of ground. |
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323 | !! @tex $(gC m^{-2})$ @endtex |
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324 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslm,nelements) :: litter_inc_below !! Increase of metabolic and structural |
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325 | !! litter below ground. The unit |
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326 | !! is given by m^2 of ground |
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327 | !! @tex $(gC m^{-2})$ @endtex |
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328 | |
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329 | REAL(r_std), DIMENSION(npts,nvm) :: lignin_struc_inc_above !! Lignin increase in structural litter, |
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330 | !! above ground. The unit is given |
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331 | !! by m^2 of ground. |
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332 | !! @tex $(gC m^{-2})$ @endtex |
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333 | REAL(r_std), DIMENSION(npts,nvm,nslm) :: lignin_struc_inc_below !! Lignin increase in structural litter, |
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334 | !! below ground. The unit is given |
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335 | !! by m^2 of ground |
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336 | !! @tex $(gC m^{-2})$ @endtex |
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337 | REAL(r_std), DIMENSION(npts,nvm,nlitt,nelements) :: litter_pft !! Metabolic and structural litter above the |
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338 | !! ground per PFT |
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339 | REAL(r_std), DIMENSION(npts) :: zdiff_min !! Intermediate field for looking for minimum |
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340 | !! of what? this is not used in the code. |
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341 | !! [??CHECK] could we delete it? |
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342 | CHARACTER(LEN=10), DIMENSION(nlitt) :: litter_str !! Messages to write output information about |
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343 | !! the litter |
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344 | CHARACTER(LEN=22), DIMENSION(nparts) :: part_str !! Messages to write output information about |
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345 | !! the plant |
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346 | CHARACTER(LEN=7), DIMENSION(ncarb) :: carbon_str !! Messages to write output information about |
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347 | !! the soil carbon |
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348 | CHARACTER(LEN=5), DIMENSION(nlevs) :: level_str !! Messages to write output information about |
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349 | !! the level (aboveground or belowground litter) |
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350 | INTEGER(i_std) :: i,j,k,l,ig,m !! Indices (unitless) |
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351 | REAL(r_std), DIMENSION(npts) :: Dif_coef !! Diffusion coeficient used for bioturbation (m2 days-1) |
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352 | !!$OMP THREADPRIVATE(Dif_coef) |
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353 | |
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354 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslm,nelements) :: litter_flux !! Belowground litter carbon flux within pools towards the soil column\f$(gC m^{2} dt^{-1})$\f |
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355 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslm,nelements) :: litter_flux_old !! Belowground litter carbon flux within pools towards the soil column\f$(gC m^{2} dt^{-1})$\f |
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356 | !! used for storage |
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357 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nelements) :: litter_above_flux !! Above litter carbon flux within pools towards the soil column\f$(gC m^{2} dt^{-1})$\f |
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358 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nelements) :: litter_above_flux_old !! Above litter carbon flux within pools towards the soil column\f$(gC m^{2} dt^{-1})$\f |
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359 | !! used for storage |
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360 | REAL(r_std), DIMENSION(npts) :: rpc !! Scaling factor for integrating vertical soil |
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361 | !! profiles (unitless) |
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362 | REAL(r_std), DIMENSION(npts,nvm,nmbcomp,nelements) :: check_intern !! Contains the components of the internal |
---|
363 | !! mass balance chech for this routine |
---|
364 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
---|
365 | REAL(r_std), DIMENSION(npts,nvm,nelements) :: closure_intern !! Check closure of internal mass balance |
---|
366 | |
---|
367 | REAL(r_std), DIMENSION(npts,nvm,nelements) :: pool_start !! Start and end pool of this routine |
---|
368 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
---|
369 | REAL(r_std), DIMENSION(npts,nvm,nelements) :: pool_end !! End pool of this routine not corrected |
---|
370 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
---|
371 | REAL(r_std), DIMENSION(npts,nvm,nelements) :: pool_end_after !! Start and end pool of this routine |
---|
372 | !! @tex $(gC pixel^{-1} dt^{-1})$ @endtex |
---|
373 | REAL(r_std), DIMENSION(npts,nslm) :: moist_soil !! moisture in soil for one pixel (m3/m3) |
---|
374 | |
---|
375 | ! REAL(r_std), DIMENSION(npts,nvm,nslm) :: resp_hetero_litter_layer !! Litter heterotrophic respiration per layer. The unit |
---|
376 | !! is given by m^2 of ground by z. |
---|
377 | !! @tex $(gC dtradia one\_day^{-1}) m^{-2} z^{-1})$ @endtex |
---|
378 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslmd,nelements) ::litter_below_old !! Metabolic and structural litter, below ground |
---|
379 | !! The unit is given by m^2 of |
---|
380 | !! ground @tex $(gC m^{-2} $ @endtex used for storage |
---|
381 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nslmd,nelements) ::litter_below_old_buffer !! Metabolic and structural litter, below ground |
---|
382 | !! The unit is given by m^2 of |
---|
383 | !! ground @tex $(gC m^{-2} $ @endtex used for storage |
---|
384 | REAL(r_std), DIMENSION(npts,nlitt,nvm,nelements) :: litter_above_old !! Metabolic and structural litter,above ground |
---|
385 | !! The unit is given by m^2 of |
---|
386 | !! ground @tex $(gC m^{-2})$ @endtex used for storage |
---|
387 | REAL(r_std), DIMENSION(npts) :: one_array |
---|
388 | !_ ================================================================================================================================ |
---|
389 | |
---|
390 | IF (printlev>=3) WRITE(numout,*) 'Entering littercalc', nslmd |
---|
391 | |
---|
392 | !! 1. Initialisations of the different fields during the first call of the routine |
---|
393 | !! 1.0 Calculation of soil moisture |
---|
394 | moist_soil(:,:) = zero |
---|
395 | DO l = 1,nslm |
---|
396 | DO i = 1, nstm |
---|
397 | moist_soil(:,l)= moist_soil(:,l) + soil_mc(:,l,i)*soiltile(:,i) |
---|
398 | ENDDO |
---|
399 | ENDDO |
---|
400 | |
---|
401 | WHERE (bulk_dens(:) .LT. 500) |
---|
402 | bulk_dens(:) = bulk_dens(:)*1e3 |
---|
403 | ENDWHERE |
---|
404 | |
---|
405 | z_soil(0) = zero |
---|
406 | z_soil(1:nslm) = zlt(1:nslm) |
---|
407 | |
---|
408 | !! 1.1 Initialize check for mass balance closure |
---|
409 | ! The mass balance is calculated at the end of this routine |
---|
410 | ! in section 14. Initial biomass and harvest pool and all other |
---|
411 | ! relevant pools were set to zero before calling this routine. |
---|
412 | pool_start(:,:,:) = zero |
---|
413 | IF (ld_doc) THEN |
---|
414 | DO m = 2, nvm |
---|
415 | DO i = 1,nlitt |
---|
416 | DO l = 1, nslmd |
---|
417 | pool_start(:,m,icarbon) = pool_start(:,m,icarbon) + & |
---|
418 | ( litter_below(:,i,m,l,icarbon) ) * veget_max(:,m) |
---|
419 | ENDDO |
---|
420 | ENDDO |
---|
421 | ENDDO |
---|
422 | |
---|
423 | DO m = 2, nvm |
---|
424 | DO i = 1,nlitt |
---|
425 | pool_start(:,m,icarbon) = pool_start(:,m,icarbon) + & |
---|
426 | ( litter_above(:,i,m,icarbon) ) * veget_max(:,m) |
---|
427 | ENDDO |
---|
428 | ENDDO |
---|
429 | |
---|
430 | DO m = 2, nvm |
---|
431 | DO i = 1, nparts |
---|
432 | pool_start(:,m,icarbon) = pool_start(:,m,icarbon) + & |
---|
433 | (turnover(:,m,i,icarbon) + bm_to_litter(:,m,i,icarbon)) * veget_max(:,m) |
---|
434 | ENDDO |
---|
435 | ENDDO |
---|
436 | ENDIF |
---|
437 | IF ( firstcall ) THEN |
---|
438 | |
---|
439 | !! 1.2.1 litter fractions: |
---|
440 | !! what fraction of leaves, wood, etc. goes into metabolic and structural litterpools |
---|
441 | DO k = 1, nparts |
---|
442 | |
---|
443 | litterfrac(k,imetabolic) = metabolic_ref_frac - metabolic_LN_ratio * LC(k) * CN(k) |
---|
444 | litterfrac(k,istructural) = un - litterfrac(k,imetabolic) |
---|
445 | |
---|
446 | ENDDO |
---|
447 | |
---|
448 | !! 1.2.2 residence times in litter pools (days) |
---|
449 | litter_tau(imetabolic) = tau_metabolic * one_year ! .5 years |
---|
450 | litter_tau(istructural) = tau_struct * one_year ! 3 years |
---|
451 | |
---|
452 | pool_tau(imetabo) = tau_metabolic |
---|
453 | pool_tau(istrabo) = tau_struct |
---|
454 | pool_tau(imetbel) = tau_metabolic |
---|
455 | pool_tau(istrbel) = tau_struct |
---|
456 | pool_tau(iact) = carbon_tau_iactive |
---|
457 | pool_tau(islo) = carbon_tau_islow |
---|
458 | pool_tau(ipas) = carbon_tau_ipassive |
---|
459 | DOC_tau(imetabo) = DOC_tau_labile / one_year |
---|
460 | DOC_tau(istrabo) = DOC_tau_labile / one_year |
---|
461 | DOC_tau(imetbel) = DOC_tau_labile / one_year |
---|
462 | DOC_tau(istrbel) = DOC_tau_labile / one_year |
---|
463 | DOC_tau(iact) = DOC_tau_labile / one_year |
---|
464 | DOC_tau(islo) = DOC_tau_stable / one_year |
---|
465 | DOC_tau(ipas) = DOC_tau_stable / one_year |
---|
466 | |
---|
467 | !! 1.2.3 decomposition flux fraction that goes into soil |
---|
468 | ! (litter -> carbon, above and below) |
---|
469 | ! 1-frac_soil goes into atmosphere |
---|
470 | frac_soil(:,:,:) = zero |
---|
471 | |
---|
472 | ! structural litter: lignin fraction goes into slow pool + respiration, |
---|
473 | ! rest into active pool + respiration |
---|
474 | frac_soil(istructural,iactive,iabove) = frac_soil_struct_aa |
---|
475 | frac_soil(istructural,iactive,ibelow) = frac_soil_struct_ab |
---|
476 | frac_soil(istructural,islow,iabove) = frac_soil_struct_sa |
---|
477 | frac_soil(istructural,islow,ibelow) = frac_soil_struct_sb |
---|
478 | |
---|
479 | ! metabolic litter: all goes into active pool + respiration. |
---|
480 | ! Nothing into slow or passive pool. |
---|
481 | frac_soil(imetabolic,iactive,iabove) = frac_soil_metab_aa |
---|
482 | frac_soil(imetabolic,iactive,ibelow) = frac_soil_metab_ab |
---|
483 | |
---|
484 | |
---|
485 | !! 1.4 messages |
---|
486 | litter_str(imetabolic) = 'metabolic' |
---|
487 | litter_str(istructural) = 'structural' |
---|
488 | |
---|
489 | carbon_str(iactive) = 'active' |
---|
490 | carbon_str(islow) = 'slow' |
---|
491 | carbon_str(ipassive) = 'passive' |
---|
492 | |
---|
493 | level_str(iabove) = 'above' |
---|
494 | level_str(ibelow) = 'below' |
---|
495 | |
---|
496 | part_str(ileaf) = 'leaves' |
---|
497 | part_str(isapabove) = 'sap above ground' |
---|
498 | part_str(isapbelow) = 'sap below ground' |
---|
499 | part_str(iheartabove) = 'heartwood above ground' |
---|
500 | part_str(iheartbelow) = 'heartwood below ground' |
---|
501 | part_str(iroot) = 'roots' |
---|
502 | part_str(ifruit) = 'fruits' |
---|
503 | part_str(icarbres) = 'carbohydrate reserve' |
---|
504 | |
---|
505 | WRITE(numout,*) 'litter:' |
---|
506 | |
---|
507 | WRITE(numout,*) ' > C/N ratios: ' |
---|
508 | DO k = 1, nparts |
---|
509 | WRITE(numout,*) ' ', part_str(k), ': ',CN(k) |
---|
510 | ENDDO |
---|
511 | |
---|
512 | WRITE(numout,*) ' > Lignine/C ratios: ' |
---|
513 | DO k = 1, nparts |
---|
514 | WRITE(numout,*) ' ', part_str(k), ': ',LC(k) |
---|
515 | ENDDO |
---|
516 | |
---|
517 | WRITE(numout,*) ' > fraction of compartment that goes into litter: ' |
---|
518 | DO k = 1, nparts |
---|
519 | DO m = 1, nlitt |
---|
520 | WRITE(numout,*) ' ', part_str(k), '-> ',litter_str(m), ':',litterfrac(k,m) |
---|
521 | ENDDO |
---|
522 | ENDDO |
---|
523 | |
---|
524 | WRITE(numout,*) ' > minimal carbon residence time in litter pools (d):' |
---|
525 | DO m = 1, nlitt |
---|
526 | WRITE(numout,*) ' ',litter_str(m),':',litter_tau(m) |
---|
527 | ENDDO |
---|
528 | |
---|
529 | WRITE(numout,*) ' > litter decomposition flux fraction that really goes ' |
---|
530 | WRITE(numout,*) ' into carbon pools (rest into the atmosphere):' |
---|
531 | DO m = 1, nlitt |
---|
532 | DO l = 1, nlevs |
---|
533 | DO k = 1, ncarb |
---|
534 | WRITE(numout,*) ' ',litter_str(m),' ',level_str(l),' -> ',& |
---|
535 | carbon_str(k),':', frac_soil(m,k,l) |
---|
536 | ENDDO |
---|
537 | ENDDO |
---|
538 | ENDDO |
---|
539 | |
---|
540 | firstcall = .FALSE. |
---|
541 | |
---|
542 | ENDIF |
---|
543 | |
---|
544 | !! 1.3 Initialization |
---|
545 | |
---|
546 | DO k = 1, nparts |
---|
547 | |
---|
548 | litterfrac_pxl(:,k,imetabolic) = MAX(zero, MIN(un, metabolic_ref_frac - metabolic_LN_ratio * LC(k) * CN(k)))! * (un + poor_soils(:)) |
---|
549 | litterfrac_pxl(:,k,istructural) = MAX(zero, MIN(un, un - litterfrac_pxl(:,k,imetabolic))) |
---|
550 | |
---|
551 | ENDDO |
---|
552 | |
---|
553 | |
---|
554 | litter_above_flux(:,:,:,:) = zero |
---|
555 | litter_flux(:,:,:,:,:) = zero |
---|
556 | litter_flux_old(:,:,:,:,:) = zero |
---|
557 | old_struc_above(:,:) = zero |
---|
558 | old_struc_below(:,:,:) = zero |
---|
559 | litter_pft(:,:,:,:) = zero |
---|
560 | Dif_coef(:) = (Dif/one_year)*dt |
---|
561 | |
---|
562 | |
---|
563 | !! 1.3 litter above the ground per PFT. |
---|
564 | DO j = 2, nvm ! Loop over # PFTs |
---|
565 | DO k = 1, nlitt !Loop over litter pool |
---|
566 | litter_pft(:,j,k,icarbon) = litterpart(:,j,k) * litter_above(:,k,j,icarbon) |
---|
567 | ENDDO |
---|
568 | ENDDO |
---|
569 | |
---|
570 | |
---|
571 | !! 1.4 set output to zero |
---|
572 | deadleaf_cover(:) = zero |
---|
573 | resp_hetero_litter(:,:) = zero |
---|
574 | resp_hetero_flood(:,:) = zero |
---|
575 | soilcarbon_input(:,:,:,:,:)= zero |
---|
576 | floodcarbon_input(:,:,:,:)= zero |
---|
577 | !resp_hetero_litter_layer(:,:,:) = zero |
---|
578 | |
---|
579 | !! 2. Add biomass to different litterpools (per m^2 of ground) |
---|
580 | |
---|
581 | !! 2.1 first, save old structural litter (needed for lignin fractions). |
---|
582 | ! above |
---|
583 | DO m = 2,nvm !Loop over PFTs |
---|
584 | |
---|
585 | old_struc_above(:,m) = litter_above(:,istructural,m,icarbon) |
---|
586 | |
---|
587 | ENDDO |
---|
588 | |
---|
589 | !below |
---|
590 | DO l = 1, nslmd !Loop over soil levels (below ground) |
---|
591 | DO m = 2,nvm !Loop over PFTs |
---|
592 | |
---|
593 | old_struc_below(:,m,l) = litter_below(:,istructural,m,l,icarbon) |
---|
594 | |
---|
595 | ENDDO |
---|
596 | ENDDO |
---|
597 | |
---|
598 | !! 2.2 update litter, dead leaves, and lignin content in structural litter |
---|
599 | litter_inc_above(:,:,:,:) = zero |
---|
600 | lignin_struc_inc_above(:,:) = zero |
---|
601 | litter_inc_below(:,:,:,:,:) = zero |
---|
602 | lignin_struc_inc_below(:,:,:) = zero |
---|
603 | litter_inc_PFT_above(:,:,:,:) = zero |
---|
604 | litter_inc_PFT_below(:,:,:,:,:) = zero |
---|
605 | |
---|
606 | |
---|
607 | DO j = 2,nvm !Loop over PFTs |
---|
608 | |
---|
609 | !! 2.2.1 litter |
---|
610 | DO k = 1, nlitt !Loop over litter pools (metabolic and structural) |
---|
611 | |
---|
612 | !! 2.2.2 calculate litter increase (per m^2 of ground). |
---|
613 | ! Only a given fracion of fruit turnover is directly coverted into litter. |
---|
614 | ! Litter increase for each PFT, structural and metabolic, above/below. It must |
---|
615 | ! be noted that the distribution of above ground litter is done within the soil layers |
---|
616 | ! as a proportion of the layer size. But for the below ground layer it follows the root profile |
---|
617 | |
---|
618 | ! For the first litter layer |
---|
619 | litter_inc_PFT_above(:,j,k,icarbon) = & |
---|
620 | litterfrac_pxl(:,ileaf,k) * bm_to_litter(:,j,ileaf,icarbon) + & |
---|
621 | litterfrac_pxl(:,isapabove,k) * bm_to_litter(:,j,isapabove,icarbon) + & |
---|
622 | litterfrac_pxl(:,iheartabove,k) * bm_to_litter(:,j,iheartabove,icarbon) + & |
---|
623 | litterfrac_pxl(:,ifruit,k) * bm_to_litter(:,j,ifruit,icarbon) + & |
---|
624 | litterfrac_pxl(:,icarbres,k) * bm_to_litter(:,j,icarbres,icarbon) + & |
---|
625 | litterfrac_pxl(:,ileaf,k) * turnover(:,j,ileaf,icarbon) + & |
---|
626 | litterfrac_pxl(:,isapabove,k) * turnover(:,j,isapabove,icarbon) + & |
---|
627 | litterfrac_pxl(:,iheartabove,k) * turnover(:,j,iheartabove,icarbon) + & |
---|
628 | litterfrac_pxl(:,ifruit,k) * turnover(:,j,ifruit,icarbon) + & |
---|
629 | litterfrac_pxl(:,icarbres,k) * turnover(:,j,icarbres,icarbon) |
---|
630 | |
---|
631 | ! litter increase, met/struct, above |
---|
632 | litter_inc_above(:,k,j,icarbon) = litter_inc_above(:,k,j,icarbon) + litter_inc_PFT_above(:,j,k,icarbon) |
---|
633 | !! The function used for root profile is coming from stomate_npp.f90 |
---|
634 | rpc(:) = un /( ( un - EXP( -z_soil(nslm) / rprof(:,j) )) ) |
---|
635 | |
---|
636 | DO l = 1, nslm |
---|
637 | |
---|
638 | litter_inc_PFT_below(:,j,k,l,icarbon) = & |
---|
639 | litterfrac_pxl(:,isapbelow,k) * bm_to_litter(:,j,isapbelow,icarbon) * & |
---|
640 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
641 | litterfrac_pxl(:,iheartbelow,k) * bm_to_litter(:,j,iheartbelow,icarbon) * & |
---|
642 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
643 | litterfrac_pxl(:,iroot,k) * bm_to_litter(:,j,iroot,icarbon) * & |
---|
644 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
645 | litterfrac_pxl(:,isapbelow,k) * turnover(:,j,isapbelow,icarbon) * & |
---|
646 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
647 | litterfrac_pxl(:,iheartbelow,k) * turnover(:,j,iheartbelow,icarbon) * & |
---|
648 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
649 | litterfrac_pxl(:,iroot,k) * turnover(:,j,iroot,icarbon) * & |
---|
650 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) |
---|
651 | |
---|
652 | ! litter increase, met/struct, below |
---|
653 | litter_inc_below(:,k,j,l,icarbon) = litter_inc_below(:,k,j,l,icarbon) + litter_inc_PFT_below(:,j,k,l,icarbon) |
---|
654 | ENDDO |
---|
655 | !! 2.2.3 dead leaves, for soil cover. |
---|
656 | dead_leaves(:,j,k) = & |
---|
657 | dead_leaves(:,j,k) + & |
---|
658 | litterfrac_pxl(:,ileaf,k) * ( bm_to_litter(:,j,ileaf,icarbon) + turnover(:,j,ileaf,icarbon) ) |
---|
659 | |
---|
660 | !! 2.2.4 lignin increase in structural litter |
---|
661 | IF ( k .EQ. istructural ) THEN |
---|
662 | |
---|
663 | lignin_struc_inc_above(:,j) = & |
---|
664 | lignin_struc_inc_above(:,j) + & |
---|
665 | LC(ileaf) * bm_to_litter(:,j,ileaf,icarbon) + & |
---|
666 | LC(isapabove) * bm_to_litter(:,j,isapabove,icarbon) + & |
---|
667 | LC(iheartabove) * bm_to_litter(:,j,iheartabove,icarbon) + & |
---|
668 | LC(ifruit) * bm_to_litter(:,j,ifruit,icarbon) + & |
---|
669 | LC(icarbres) * bm_to_litter(:,j,icarbres,icarbon) + & |
---|
670 | LC(ileaf) * turnover(:,j,ileaf,icarbon) + & |
---|
671 | LC(isapabove) * turnover(:,j,isapabove,icarbon) + & |
---|
672 | LC(iheartabove) * turnover(:,j,iheartabove,icarbon) + & |
---|
673 | LC(ifruit) * turnover(:,j,ifruit,icarbon) + & |
---|
674 | LC(icarbres) * turnover(:,j,icarbres,icarbon) |
---|
675 | |
---|
676 | !! The function used for root profile is coming from stomate_npp.f90 |
---|
677 | DO l = 1, nslm |
---|
678 | |
---|
679 | lignin_struc_inc_below(:,j,l) = & |
---|
680 | lignin_struc_inc_below(:,j,l) + & |
---|
681 | LC(isapbelow) * bm_to_litter(:,j,isapbelow,icarbon) * & |
---|
682 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
683 | LC(iheartbelow) * bm_to_litter(:,j,iheartbelow,icarbon) * & |
---|
684 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
685 | LC(iroot) * bm_to_litter(:,j,iroot,icarbon) * & |
---|
686 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
687 | LC(isapbelow)*turnover(:,j,isapbelow,icarbon) * & |
---|
688 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
689 | LC(iheartbelow)*turnover(:,j,iheartbelow,icarbon) * & |
---|
690 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) + & |
---|
691 | LC(iroot)*turnover(:,j,iroot,icarbon) * & |
---|
692 | rpc(:) * ( EXP( -z_soil(l-1)/rprof(:,j) ) - EXP( -z_soil(l)/rprof(:,j) ) ) |
---|
693 | ENDDO |
---|
694 | |
---|
695 | ENDIF |
---|
696 | ENDDO |
---|
697 | !! Manure-C input was added to the metabolic & structural litter-C (H. Zhang) |
---|
698 | litter_inc_above(:,imetabolic,j,icarbon) = litter_inc_above(:,imetabolic,j,icarbon) +Cinp_manure_solid(:,j)*f_met_solmanure |
---|
699 | litter_inc_above(:,istructural,j,icarbon) = litter_inc_above(:,istructural,j,icarbon) +Cinp_manure_solid(:,j)*(un-f_met_solmanure) |
---|
700 | ENDDO |
---|
701 | |
---|
702 | !! 2.2.5 add new litter (struct/met, above/below) |
---|
703 | !WRITE(numout,*) 'SUMstomlitt1.0_litter',MINVAL(litter_above),MINVAL(litter_below),MAXVAL(litter_above),MAXVAL(litter_below) |
---|
704 | !WRITE(numout,*) 'litterin',MINVAL(litter_inc_above),MINVAL(litter_inc_below),MAXVAL(litter_inc_above),MAXVAL(litter_inc_below) |
---|
705 | |
---|
706 | litter_above(:,:,:,:) = litter_above(:,:,:,:) + litter_inc_above(:,:,:,:) |
---|
707 | litter_below(:,:,:,1:nslm,:) = litter_below(:,:,:,1:nslm,:) + litter_inc_below(:,:,:,1:nslm,:) |
---|
708 | |
---|
709 | !WRITE(numout,*) 'SUMstomlitt1.1_litter',SUM(litter_above),SUM(litter_below) |
---|
710 | !WRITE(numout,*) 'stomlitt_ZHC1',SUM(lignin_struc_below) |
---|
711 | !WRITE(numout,*) 'litter',MINVAL(litter_above),MINVAL(litter_below),MAXVAL(litter_above),MAXVAL(litter_below) |
---|
712 | !WRITE(numout,*) 'litterin',MINVAL(litter_inc_above),MINVAL(litter_inc_below),MAXVAL(litter_inc_above),MAXVAL(litter_inc_below) |
---|
713 | !! 2.2.6 for security: can't add more lignin than structural litter (above/below) |
---|
714 | DO m = 2,nvm !Lopp over PFTs |
---|
715 | |
---|
716 | lignin_struc_inc_above(:,m) = & |
---|
717 | MIN( lignin_struc_inc_above(:,m), litter_inc_above(:,istructural,m,icarbon) ) |
---|
718 | |
---|
719 | ENDDO |
---|
720 | |
---|
721 | DO l = 1, nslm !Loop over soil levels (below ground) |
---|
722 | DO m = 2,nvm !Lopp over PFTs |
---|
723 | |
---|
724 | lignin_struc_inc_below(:,m,l) = & |
---|
725 | MIN( lignin_struc_inc_below(:,m,l), litter_inc_below(:,istructural,m,l,icarbon) ) |
---|
726 | |
---|
727 | ENDDO |
---|
728 | ENDDO |
---|
729 | |
---|
730 | !! 2.2.7.1 new lignin content: add old lignin and lignin increase, divide by |
---|
731 | !! total structural litter (above) |
---|
732 | |
---|
733 | DO m = 2,nvm !Loop over PFTs |
---|
734 | WHERE( litter_above(:,istructural,m,icarbon) .GT. min_stomate ) |
---|
735 | |
---|
736 | !MM : Soenke modif |
---|
737 | ! Best vectorization ? |
---|
738 | !!$ lignin_struc(:,:,:) = & |
---|
739 | !!$ ( lignin_struc(:,:,:)*old_struc(:,:,:) + lignin_struc_inc(:,:,:) ) / & |
---|
740 | !!$ litter(:,istructural,:,:,icarbon) |
---|
741 | |
---|
742 | lignin_struc_above(:,m) = lignin_struc_above(:,m) * old_struc_above(:,m) |
---|
743 | lignin_struc_above(:,m) = lignin_struc_above(:,m) + lignin_struc_inc_above(:,m) |
---|
744 | lignin_struc_above(:,m) = lignin_struc_above(:,m) / litter_above(:,istructural,m,icarbon) |
---|
745 | ELSEWHERE |
---|
746 | lignin_struc_above(:,m) = zero |
---|
747 | ENDWHERE |
---|
748 | ENDDO |
---|
749 | |
---|
750 | !! 2.2.7.2 new lignin content: add old lignin and lignin increase, divide by |
---|
751 | !! total structural litter (below) |
---|
752 | DO l = 1, nslm !Loop over soil levels (below ground) |
---|
753 | DO m = 2,nvm !Loop over PFTs |
---|
754 | WHERE( litter_below(:,istructural,m,l,icarbon) .GT. min_stomate ) |
---|
755 | |
---|
756 | !MM : Soenke modif |
---|
757 | ! Best vectorization ? |
---|
758 | !!$ lignin_struc(:,:,:) = & |
---|
759 | !!$ ( lignin_struc(:,:,:)*old_struc(:,:,:) + lignin_struc_inc(:,:,:)) / & |
---|
760 | !!$ litter(:,istructural,:,:,icarbon) |
---|
761 | |
---|
762 | lignin_struc_below(:,m,l) = lignin_struc_below(:,m,l) * old_struc_below(:,m,l) |
---|
763 | lignin_struc_below(:,m,l) = lignin_struc_below(:,m,l) + lignin_struc_inc_below(:,m,l) |
---|
764 | lignin_struc_below(:,m,l) = lignin_struc_below(:,m,l) /litter_below(:,istructural,m,l,icarbon) |
---|
765 | ELSEWHERE |
---|
766 | lignin_struc_below(:,m,l) = zero |
---|
767 | ENDWHERE |
---|
768 | ENDDO |
---|
769 | ENDDO |
---|
770 | |
---|
771 | !! 2.3 new litter fraction per PFT (for structural and metabolic litter, above |
---|
772 | !! the ground). |
---|
773 | DO j = 2,nvm !Loop over PFTs |
---|
774 | DO l =1,nlitt |
---|
775 | WHERE ( litter_above(:,l,j,icarbon) .GT. min_stomate ) |
---|
776 | |
---|
777 | litterpart(:,j,l) = & |
---|
778 | ( litter_pft(:,j,l,icarbon) + litter_inc_PFT_above(:,j,l,icarbon) ) / litter_above(:,l,j,icarbon) |
---|
779 | |
---|
780 | ELSEWHERE |
---|
781 | |
---|
782 | litterpart(:,j,l) = zero |
---|
783 | |
---|
784 | ENDWHERE |
---|
785 | ENDDO |
---|
786 | ENDDO |
---|
787 | !! 3. Temperature control on decay: Factor between 0 and 1 |
---|
788 | |
---|
789 | !! 3.1 above: surface temperature |
---|
790 | DO j=1,nlitt |
---|
791 | control_temp_above(:,j) = control_temp_func (npts, tsurf,litter_tau(j)*(un+poor_soils(:))) |
---|
792 | ENDDO |
---|
793 | !! 3.2 below: convolution of temperature and decomposer profiles |
---|
794 | !! (exponential decomposer profile supposed) |
---|
795 | |
---|
796 | !! 3.2.1 integrate over the nslm levels |
---|
797 | tsoil_decomp(:) = zero |
---|
798 | |
---|
799 | DO l = 1, nslm |
---|
800 | DO j = 1,npool |
---|
801 | |
---|
802 | tsoil_decomp(:) = tsoil(:,l) |
---|
803 | |
---|
804 | control_temp_soil(:,l,j) = control_temp_func (npts,tsoil_decomp,pool_tau(j)*(un+poor_soils(:))) |
---|
805 | |
---|
806 | ENDDO |
---|
807 | ENDDO |
---|
808 | |
---|
809 | DO l = 1, nslm |
---|
810 | DO j = 1,npool |
---|
811 | |
---|
812 | tsoil_decomp(:) = tsoil(:,l) |
---|
813 | |
---|
814 | control_temp_soil(:,l,npool+j) = control_temp_func(npts,tsoil_decomp,DOC_tau(j)*(un+poor_soils(:))) |
---|
815 | |
---|
816 | ENDDO |
---|
817 | ENDDO |
---|
818 | |
---|
819 | control_temp_soil(:,nslmd,:)=control_temp_soil(:,nslm,:) |
---|
820 | WHERE (ISNAN(control_temp_soil(:,:,:))) |
---|
821 | control_temp_soil(:,:,:)=un |
---|
822 | ENDWHERE |
---|
823 | |
---|
824 | !! 4. Moisture control. Factor between 0 and 1 |
---|
825 | |
---|
826 | !! 4.1 above the ground: litter humidity |
---|
827 | |
---|
828 | one_array(:) = un |
---|
829 | soilhum_decomp(:) = zero |
---|
830 | DO m= 1,nvm |
---|
831 | !We used the sum over the 4 first layer as it is done to |
---|
832 | !compute litterhum in hydrol.f90 |
---|
833 | soilhum_decomp(:) =soil_mc(:,1,pref_soil_veg(m))*(z_soil(1)/z_soil(4)) + & |
---|
834 | soil_mc(:,2,pref_soil_veg(m))*((z_soil(2)-z_soil(1))/z_soil(4)) + & |
---|
835 | soil_mc(:,3,pref_soil_veg(m))*((z_soil(3)-z_soil(2))/z_soil(4)) + & |
---|
836 | soil_mc(:,4,pref_soil_veg(m))*((z_soil(4)-z_soil(3))/z_soil(4)) |
---|
837 | ! |
---|
838 | IF (moist_func_Moyano) THEN |
---|
839 | control_moist_above(:,m) = control_moist_func_moyano (npts, soilhum_decomp,bulk_dens, & |
---|
840 | clay, carbon, veget_max) |
---|
841 | ELSE |
---|
842 | control_moist_above(:,m) = control_moist_func (npts, soilhum_decomp) |
---|
843 | ENDIF |
---|
844 | ENDDO |
---|
845 | !! 4.2 below: soil humidity for each soil layers |
---|
846 | |
---|
847 | !! 4.2.1 integrate over the nslm levels |
---|
848 | soilhum_decomp(:) = zero |
---|
849 | |
---|
850 | DO l = 1, nslm !Loop over soil levels |
---|
851 | DO m =1,nvm |
---|
852 | soilhum_decomp(:) =soil_mc(:,l,pref_soil_veg(m)) |
---|
853 | IF (moist_func_Moyano) THEN |
---|
854 | control_moist_soil(:,l,m) = control_moist_func_moyano (npts, soilhum_decomp,bulk_dens, & |
---|
855 | clay, carbon, veget_max) |
---|
856 | ELSE |
---|
857 | control_moist_soil(:,l,m) = control_moist_func (npts, soilhum_decomp) |
---|
858 | ENDIF |
---|
859 | ENDDO |
---|
860 | ENDDO |
---|
861 | |
---|
862 | control_moist_soil(:,nslmd,:) = control_moist_soil(:,nslm,:) |
---|
863 | WHERE (ISNAN(control_moist_soil(:,:,:))) |
---|
864 | control_moist_soil(:,:,:)=un |
---|
865 | ENDWHERE |
---|
866 | |
---|
867 | !! 5. fluxes from above ground litter to carbon pools and respiration |
---|
868 | DO m = 2,nvm !Loop over PFTs |
---|
869 | |
---|
870 | !! 5.1 structural litter: goes into active and slow carbon pools + respiration |
---|
871 | |
---|
872 | !! 5.1.1 total quantity of above ground structural litter which is decomposed |
---|
873 | |
---|
874 | WHERE (soil_mc(:,1,pref_soil_veg(m)) .GT. zero) |
---|
875 | fd(:) = dt/(litter_tau(istructural)*(un+poor_soils(:))) * & |
---|
876 | control_temp_above(:,istructural) * control_moist_above(:,m) * exp( -litter_struct_coef * lignin_struc_above(:,m) ) |
---|
877 | ENDWHERE |
---|
878 | DO k = 1,nelements |
---|
879 | qd(:,k) = litter_above(:,istructural,m,k) * fd(:) * (un - flood_frac(:)) |
---|
880 | qd_flood(:,k) = litter_above(:,istructural,m,k) * fd(:) * flood_frac(:)/trois |
---|
881 | ENDDO |
---|
882 | IF (.NOT. lat_exp_doc) THEN |
---|
883 | qd = qd + qd_flood |
---|
884 | qd_flood = zero |
---|
885 | ELSE |
---|
886 | !Do nothing |
---|
887 | ENDIF |
---|
888 | |
---|
889 | !! 5.1.2 decompose same fraction of structural part of dead leaves. Not exact |
---|
890 | !! as lignine content is not the same as that of the total structural litter. |
---|
891 | dead_leaves(:,m,istructural) = dead_leaves(:,m,istructural) * (un - fd(:)*(un - flood_frac(:)) - fd(:)*flood_frac(:)/trois) |
---|
892 | |
---|
893 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
894 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
895 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
896 | ! time step and avoid some constructions that could create bug during future developments. |
---|
897 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
898 | ( 1. - frac_soil(istructural,iactive,iabove) ) * qd(:,icarbon) * & |
---|
899 | ( 1. - lignin_struc_above(:,m) ) / dt |
---|
900 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
901 | ( 1. - frac_soil(istructural,iactive,iabove) ) * qd_flood(:,icarbon) * & |
---|
902 | ( 1. - lignin_struc_above(:,m) ) / dt |
---|
903 | |
---|
904 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
905 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
906 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
907 | ! time step and avoid some constructions that could create bug during future developments. |
---|
908 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
909 | ( 1. - frac_soil(istructural,islow,iabove) ) * qd(:,icarbon) * lignin_struc_above(:,m) / dt |
---|
910 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
911 | ( 1. - frac_soil(istructural,islow,iabove) ) * qd_flood(:,icarbon) * lignin_struc_above(:,m) / dt |
---|
912 | |
---|
913 | ! resp_hetero_litter_layer(:,m,1) = resp_hetero_litter_layer(:,m,1) + & |
---|
914 | ! ( 1. - frac_soil(istructural,islow,iabove) ) * qd(:,icarbon) *lignin_struc_above(:,m) / dt |
---|
915 | ! DO ig=1,npts |
---|
916 | ! IF (qd(ig,k).LT.zero) THEN |
---|
917 | ! WRITE(numout,*) 'STOMATElitt_ZHC1' |
---|
918 | ! WRITE(numout,*) 'qd: ', qd(ig,k),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
919 | ! ENDIF |
---|
920 | ! IF (fd(ig).LT.zero) THEN |
---|
921 | ! WRITE(numout,*) 'STOMATElitt_ZHC1' |
---|
922 | ! WRITE(numout,*) 'fd(ig): ', fd(ig),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
923 | ! ENDIF |
---|
924 | ! ENDDO |
---|
925 | !! 5.1.3 Calculation of the soilcarbon_input in gC m^-2 of water |
---|
926 | |
---|
927 | DO k = 1, nelements |
---|
928 | soilcarbon_input(:,m,1,istrabo,k) = (frac_soil(istructural,iactive,iabove) * ( 1. - lignin_struc_above(:,m) ) * qd(:,k) + & |
---|
929 | frac_soil(istructural,islow,iabove) * qd(:,k) * lignin_struc_above(:,m) ) /dt |
---|
930 | floodcarbon_input(:,m,iact,k) = frac_soil(istructural,iactive,iabove) * ( 1. - lignin_struc_above(:,m) ) * qd_flood(:,k) / dt |
---|
931 | floodcarbon_input(:,m,islo,k) = frac_soil(istructural,islow,iabove) * qd_flood(:,k) * lignin_struc_above(:,m) /dt |
---|
932 | ENDDO |
---|
933 | |
---|
934 | litter_above(:,istructural,m,:) = litter_above(:,istructural,m,:) - qd(:,:) - qd_flood(:,:) |
---|
935 | |
---|
936 | !! 5.2 above ground metabolic litter goes into active carbon pool + respiration |
---|
937 | |
---|
938 | !! 5.2.1 total quantity of aboveground metabolic litter that is decomposed |
---|
939 | WHERE (soil_mc(:,1,pref_soil_veg(m)) .GT. zero) |
---|
940 | fd(:) = dt/(litter_tau(imetabolic)*(un+poor_soils(:))) * control_temp_above(:,imetabolic) * control_moist_above(:,m) |
---|
941 | ELSEWHERE |
---|
942 | fd(:) = zero |
---|
943 | ENDWHERE |
---|
944 | |
---|
945 | DO k = 1,nelements |
---|
946 | qd(:,k) = litter_above(:,imetabolic,m,k) * fd(:) * (un - flood_frac(:)) |
---|
947 | qd_flood(:,k) = litter_above(:,imetabolic,m,k) * fd(:) * flood_frac(:)/trois |
---|
948 | ENDDO |
---|
949 | ! |
---|
950 | IF (.NOT. lat_exp_doc) THEN |
---|
951 | qd = qd + qd_flood |
---|
952 | qd_flood = zero |
---|
953 | ELSE |
---|
954 | !Do nothing |
---|
955 | ENDIF |
---|
956 | |
---|
957 | ! DO ig=1,npts |
---|
958 | ! IF (qd(ig,k).LT.zero) THEN |
---|
959 | ! WRITE(numout,*) 'STOMATEcarb_ZHC2' |
---|
960 | ! WRITE(numout,*) 'qd: ', qd(ig,k),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
961 | ! ENDIF |
---|
962 | ! IF (fd(ig).LT.zero) THEN |
---|
963 | ! WRITE(numout,*) 'STOMATEcarb_ZHC2' |
---|
964 | ! WRITE(numout,*) 'fd(ig): ', fd(ig),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
965 | ! ENDIF |
---|
966 | ! ENDDO |
---|
967 | !! 5.2.2 decompose same fraction of metabolic part of dead leaves. |
---|
968 | dead_leaves(:,m,imetabolic) = dead_leaves(:,m,imetabolic) * (un - fd(:)*(un - flood_frac(:)) - fd(:)*flood_frac(:)/trois) |
---|
969 | |
---|
970 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
971 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
972 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
973 | ! time step and avoid some constructions that could create bug during future developments. |
---|
974 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
975 | ( 1. - frac_soil(imetabolic,iactive,iabove) ) * qd(:,icarbon) / dt |
---|
976 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
977 | ( 1. - frac_soil(imetabolic,iactive,iabove) ) * qd_flood(:,icarbon) / dt |
---|
978 | |
---|
979 | !! 5.2.3 Calculation of the soilcarbon_input in gC m^-2 of water |
---|
980 | ! For above ground litter we assume that the soilcarbon_input coming from AB |
---|
981 | ! litter decomposition is directly incorporated into the 1st soil |
---|
982 | ! layers |
---|
983 | |
---|
984 | DO k = 1, nelements |
---|
985 | soilcarbon_input(:,m,1,imetabo,k) = frac_soil(imetabolic,iactive,iabove) * qd(:,k) / dt |
---|
986 | floodcarbon_input(:,m,iact,k) = floodcarbon_input(:,m,iact,k) + frac_soil(imetabolic,iactive,iabove) * qd_flood(:,k) / dt |
---|
987 | ENDDO |
---|
988 | litter_above(:,imetabolic,m,:) = litter_above(:,imetabolic,m,:) - qd(:,:) - qd_flood(:,:) |
---|
989 | |
---|
990 | ENDDO |
---|
991 | |
---|
992 | !! 6. fluxes from below ground litter to carbon pools and respiration |
---|
993 | DO l = 1,nslmd |
---|
994 | DO m = 2,nvm !Loop over PFTs |
---|
995 | !! 6.1 structural litter: goes into active and slow carbon pools respiration |
---|
996 | !! 6.1.1 total quantity of below ground structural litter which is decomposed |
---|
997 | |
---|
998 | WHERE (soil_mc(:,l,pref_soil_veg(m)) .GT. zero) |
---|
999 | fd(:) = dt/(litter_tau(istructural)*(un+poor_soils(:))) * & |
---|
1000 | control_temp_soil(:,l,istrbel) * control_moist_soil(:,l,m) * exp(-litter_struct_coef * lignin_struc_below(:,m,l) ) |
---|
1001 | ELSEWHERE |
---|
1002 | fd(:) = zero |
---|
1003 | ENDWHERE |
---|
1004 | |
---|
1005 | !WRITE(numout,*) 'SUMstomlitt2_control_temp_soil',SUM(control_temp_soil(:,l,istrbel)) |
---|
1006 | |
---|
1007 | DO k = 1,nelements |
---|
1008 | qd(:,k) = litter_below(:,istructural,m,l,k) * fd(:) * (un - flood_frac(:)) |
---|
1009 | qd_flood(:,k) = litter_below(:,istructural,m,l,k) * fd(:) * flood_frac(:)/trois |
---|
1010 | ENDDO |
---|
1011 | ! |
---|
1012 | IF (.NOT. lat_exp_doc) THEN |
---|
1013 | qd = qd + qd_flood |
---|
1014 | qd_flood = zero |
---|
1015 | ELSE |
---|
1016 | !Do nothing |
---|
1017 | ENDIF |
---|
1018 | |
---|
1019 | ! DO ig=1,npts |
---|
1020 | ! IF (qd(ig,k).LT.zero) THEN |
---|
1021 | ! WRITE(numout,*) 'STOMATEcarb_ZHC3' |
---|
1022 | ! WRITE(numout,*) 'qd: ', qd(ig,k),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
1023 | ! ENDIF |
---|
1024 | ! IF (fd(ig).LT.zero) THEN |
---|
1025 | ! WRITE(numout,*) 'STOMATEcarb_ZHC3' |
---|
1026 | ! WRITE(numout,*) 'fd(ig): ', fd(ig),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
1027 | ! ENDIF |
---|
1028 | ! ENDDO |
---|
1029 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
1030 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
1031 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
1032 | ! time step and avoid some constructions that could create bug during future developments. |
---|
1033 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
1034 | ( 1. - frac_soil(istructural,iactive,ibelow) ) * qd(:,icarbon) * & |
---|
1035 | ( 1. - lignin_struc_below(:,m,l) ) / dt |
---|
1036 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
1037 | ( 1. - frac_soil(istructural,iactive,ibelow) ) * qd_flood(:,icarbon) * & |
---|
1038 | ( 1. - lignin_struc_below(:,m,l) ) / dt |
---|
1039 | |
---|
1040 | |
---|
1041 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
1042 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
1043 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
1044 | ! time step and avoid some constructions that could create bug during future developments. |
---|
1045 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
1046 | ( 1. - frac_soil(istructural,islow,ibelow) ) * qd(:,icarbon) * lignin_struc_below(:,m,l) / dt |
---|
1047 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
1048 | ( 1. - frac_soil(istructural,islow,ibelow) ) * qd_flood(:,icarbon) * lignin_struc_below(:,m,l) / dt |
---|
1049 | !! 6.1 Calculation of the soilcarbon_input in gC m^-2 |
---|
1050 | |
---|
1051 | DO k = 1, nelements |
---|
1052 | IF (l .GT. sro_bottom) THEN |
---|
1053 | soilcarbon_input(:,m,l,istrbel,k) = (frac_soil(istructural,iactive,ibelow) * ( 1. - lignin_struc_below(:,m,l) ) & |
---|
1054 | * (qd(:,k)+qd_flood(:,k)) + & |
---|
1055 | (frac_soil(istructural,islow,ibelow) * (qd(:,k)+qd_flood(:,k)) * lignin_struc_below(:,m,l) )) / dt |
---|
1056 | ELSE |
---|
1057 | soilcarbon_input(:,m,l,istrbel,k) = (frac_soil(istructural,iactive,ibelow) * ( 1. - lignin_struc_below(:,m,l) ) & |
---|
1058 | * (qd(:,k)) + & |
---|
1059 | (frac_soil(istructural,islow,ibelow) * (qd(:,k)) * lignin_struc_below(:,m,l) )) / dt |
---|
1060 | floodcarbon_input(:,m,iact,k) = floodcarbon_input(:,m,iact,k) + & |
---|
1061 | frac_soil(istructural,iactive,ibelow) * ( 1. - lignin_struc_below(:,m,l) ) * qd_flood(:,k) /dt |
---|
1062 | floodcarbon_input(:,m,islo,k) = floodcarbon_input(:,m,islo,k) + (frac_soil(istructural,islow,ibelow) & |
---|
1063 | * qd_flood(:,k) * lignin_struc_below(:,m,l)) / dt |
---|
1064 | ENDIF |
---|
1065 | ENDDO |
---|
1066 | |
---|
1067 | litter_below(:,istructural,m,l,:) = litter_below(:,istructural,m,l,:) - qd(:,:) - qd_flood(:,:) |
---|
1068 | |
---|
1069 | !! 6.2 below ground metabolic litter goes into active carbon pool + respiration |
---|
1070 | |
---|
1071 | !! 6.2.1 total quantity of belowground metabolic litter that is decomposed |
---|
1072 | WHERE (soil_mc(:,l,pref_soil_veg(m)) .GT. zero) |
---|
1073 | fd(:) = dt/(litter_tau(imetabolic)*(un+poor_soils(:))) * control_temp_soil(:,l,imetbel) * control_moist_soil(:,l,m) |
---|
1074 | ELSEWHERE |
---|
1075 | fd(:) = zero |
---|
1076 | ENDWHERE |
---|
1077 | |
---|
1078 | DO k = 1,nelements |
---|
1079 | qd(:,k) = litter_below(:,imetabolic,m,l,k) * fd(:) * (un-flood_frac(:)) |
---|
1080 | qd_flood(:,k) = litter_below(:,imetabolic,m,l,k) * fd(:) * flood_frac(:)/trois |
---|
1081 | ENDDO |
---|
1082 | ! |
---|
1083 | IF (.NOT. lat_exp_doc) THEN |
---|
1084 | qd = qd + qd_flood |
---|
1085 | qd_flood = zero |
---|
1086 | ELSE |
---|
1087 | !Do nothing |
---|
1088 | ENDIF |
---|
1089 | |
---|
1090 | DO ig=1,npts |
---|
1091 | IF (qd(ig,k).LT.zero) THEN |
---|
1092 | WRITE(numout,*) 'STOMATEcarb_ZHC4' |
---|
1093 | WRITE(numout,*) 'qd: ', qd(ig,k),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
1094 | ENDIF |
---|
1095 | IF (fd(ig).LT.zero) THEN |
---|
1096 | WRITE(numout,*) 'STOMATEcarb_ZHC4' |
---|
1097 | WRITE(numout,*) 'fd(ig): ', fd(ig),MINVAL(soilcarbon_input),MINVAL(floodcarbon_input) |
---|
1098 | ENDIF |
---|
1099 | ENDDO |
---|
1100 | !BE CAREFUL: Here resp_hetero_litter is divided by dt to have a value which corresponds to |
---|
1101 | ! the sechiba time step but then in stomate.f90 resp_hetero_litter is multiplied by dt. |
---|
1102 | ! Perhaps it could be simplified. Moreover, we must totally adapt the routines to the dtradia/one_day |
---|
1103 | ! time step and avoid some constructions that could create bug during future developments. |
---|
1104 | resp_hetero_litter(:,m) = resp_hetero_litter(:,m) + & |
---|
1105 | ( 1. - frac_soil(imetabolic,iactive,ibelow) ) * qd(:,icarbon) /dt |
---|
1106 | resp_hetero_flood(:,m) = resp_hetero_flood(:,m) + & |
---|
1107 | ( 1. - frac_soil(imetabolic,iactive,ibelow) ) * qd_flood(:,icarbon) /dt |
---|
1108 | |
---|
1109 | !! 6.2.3 Calculation of the soilcarbon_input in gC m^-2 of water |
---|
1110 | |
---|
1111 | DO k = 1, nelements |
---|
1112 | IF (l .GT. sro_bottom) THEN |
---|
1113 | soilcarbon_input(:,m,l,imetbel,k) = frac_soil(imetabolic,iactive,ibelow) * (qd(:,k)+qd_flood(:,k))/ dt |
---|
1114 | ELSE |
---|
1115 | soilcarbon_input(:,m,l,imetbel,k) = frac_soil(imetabolic,iactive,ibelow) * qd(:,k)/ dt |
---|
1116 | floodcarbon_input(:,m,iact,k) = floodcarbon_input(:,m,iact,k) + frac_soil(imetabolic,iactive,ibelow) * qd_flood(:,k)/ dt |
---|
1117 | ENDIF |
---|
1118 | ENDDO |
---|
1119 | ! |
---|
1120 | litter_below(:,imetabolic,m,l,:) = litter_below(:,imetabolic,m,l,:) - qd(:,:) - qd_flood(:,:) |
---|
1121 | ! |
---|
1122 | ENDDO |
---|
1123 | ENDDO |
---|
1124 | |
---|
1125 | |
---|
1126 | DO m =2,nvm |
---|
1127 | |
---|
1128 | litter_below_old(:,:,m,:,:)=zero |
---|
1129 | litter_below_old_buffer(:,:,m,:,:)=zero |
---|
1130 | litter_below_old(:,:,m,:,:)=litter_below(:,:,m,:,:) |
---|
1131 | litter_above_old(:,:,m,:)=zero |
---|
1132 | litter_above_old(:,:,m,:)=litter_above(:,:,m,:) |
---|
1133 | DO k = 1, nelements ! Loop over elements |
---|
1134 | DO j = 1,nlitt ! Loop over litter pools |
---|
1135 | |
---|
1136 | litter_flux(:,j,m,1,k) = Dif_coef(:)*dt*ABS(litter_below_old(:,j,m,1,k)/(z_soil(1))-litter_below_old(:,j,m,2,k)/(z_soil(2)-z_soil(1)))/(z_soil(2)-z_soil(1)) |
---|
1137 | litter_above_flux(:,j,m,k) = Dif_coef(:)*dt*ABS(litter_above(:,j,m,k)/(z_litter*1e-3)-litter_below(:,j,m,1,k)/(z_litter*1e-3-z_soil(1))) |
---|
1138 | ! BE CAREFUL: Here very important assumption we assume the above ground litter layers to be 10mm thick by default. |
---|
1139 | |
---|
1140 | DO l= 2, nslm-1 ! Loop over soil layers |
---|
1141 | litter_flux(:,j,m,l,k) = Dif_coef(:)*dt*ABS(litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1))-litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)))/(z_soil(l+1)-z_soil(l)) |
---|
1142 | ENDDO |
---|
1143 | litter_flux_old(:,j,m,:,k) = litter_flux(:,j,m,:,k) |
---|
1144 | litter_above_flux_old(:,j,m,k) = litter_above_flux(:,j,m,k) |
---|
1145 | |
---|
1146 | !Below we checked if in case that, in a given layer, you have diffusion in the above and below litters, both fluxes are not higher than the stocks of the given layer. |
---|
1147 | WHERE (litter_above_old(:,j,m,k)/(z_litter*1e-3) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1148 | litter_below_old(:,j,m,2,k)/(z_soil(2)-z_soil(1)) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1149 | litter_above_flux_old(:,j,m,k)+litter_flux_old(:,j,m,1,k) .GT. litter_below_old(:,j,m,1,k)) |
---|
1150 | litter_above_flux(:,j,m,k) = litter_below_old(:,j,m,1,k)*(litter_above_flux_old(:,j,m,k)/(litter_above_flux_old(:,j,m,k)+litter_flux_old(:,j,m,1,k))) |
---|
1151 | litter_flux(:,j,m,1,k) = litter_below_old(:,j,m,1,k)*(litter_flux_old(:,j,m,1,k)/(litter_above_flux_old(:,j,m,k)+litter_flux_old(:,j,m,1,k))) |
---|
1152 | ELSEWHERE (litter_above_old(:,j,m,k)/(z_litter*1e-3) .GE. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1153 | litter_below_old(:,j,m,2,k)/(z_soil(2)-z_soil(1)) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1154 | litter_below_old(:,j,m,1,k) + litter_above_flux_old(:,j,m,k) - litter_flux_old(:,j,m,1,k) .LE. min_stomate) |
---|
1155 | litter_above_flux(:,j,m,k) = litter_above_flux_old(:,j,m,k) |
---|
1156 | litter_flux(:,j,m,1,k) = litter_below_old(:,j,m,1,k) + litter_above_flux_old(:,j,m,k) |
---|
1157 | ELSEWHERE (litter_above_old(:,j,m,k)/(z_litter*1e-3) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1158 | litter_below_old(:,j,m,2,k)/(z_soil(2)-z_soil(1)) .GE. litter_below_old(:,j,m,1,k)/(z_soil(1)) .AND. & |
---|
1159 | litter_below_old(:,j,m,1,k) - litter_above_flux_old(:,j,m,k) + litter_flux_old(:,j,m,1,k) .LE. min_stomate) |
---|
1160 | litter_above_flux(:,j,m,k) = litter_below_old(:,j,m,1,k) + litter_flux_old(:,j,m,1,k) |
---|
1161 | litter_flux(:,j,m,1,k) = litter_flux_old(:,j,m,1,k) |
---|
1162 | ELSEWHERE |
---|
1163 | litter_above_flux(:,j,m,k) = litter_above_flux_old(:,j,m,k) |
---|
1164 | litter_flux(:,j,m,1,k) = litter_flux_old(:,j,m,1,k) |
---|
1165 | ENDWHERE |
---|
1166 | |
---|
1167 | |
---|
1168 | DO l =1, nslm-2 |
---|
1169 | WHERE (litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1170 | litter_below_old(:,j,m,l+2,k)/(z_soil(l+2)-z_soil(l+1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1171 | litter_flux_old(:,j,m,l,k)+litter_flux_old(:,j,m,l+1,k) .GT. litter_below_old(:,j,m,l+1,k)) |
---|
1172 | litter_flux(:,j,m,l,k) = litter_below_old(:,j,m,l+1,k)*(litter_flux_old(:,j,m,l,k)/(litter_flux_old(:,j,m,l,k)+litter_flux_old(:,j,m,l+1,k))) |
---|
1173 | litter_flux(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k)*(litter_flux_old(:,j,m,l+1,k)/(litter_flux_old(:,j,m,l,k)+litter_flux_old(:,j,m,l+1,k))) |
---|
1174 | ELSEWHERE (litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .GE. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1175 | litter_below_old(:,j,m,l+2,k)/(z_soil(l+2)-z_soil(l+1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1176 | litter_below_old(:,j,m,l+1,k) + litter_flux_old(:,j,m,l,k) - litter_flux_old(:,j,m,l+1,k) .LE. min_stomate) |
---|
1177 | litter_flux(:,j,m,l,k) = litter_flux_old(:,j,m,l,k) |
---|
1178 | litter_flux(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k) + litter_flux_old(:,j,m,l,k) |
---|
1179 | ELSEWHERE (litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1180 | litter_below_old(:,j,m,l+2,k)/(z_soil(l+2)-z_soil(l+1)) .GE. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l)) .AND. & |
---|
1181 | litter_below_old(:,j,m,l+1,k) - litter_flux_old(:,j,m,l,k) + litter_flux_old(:,j,m,l+1,k) .LE. min_stomate) |
---|
1182 | litter_flux(:,j,m,l,k) = litter_below_old(:,j,m,l+1,k) + litter_flux_old(:,j,m,l+1,k) |
---|
1183 | litter_flux(:,j,m,l+1,k) = litter_flux_old(:,j,m,l+1,k) |
---|
1184 | ELSEWHERE |
---|
1185 | litter_flux(:,j,m,l,k) = litter_flux_old(:,j,m,l,k) |
---|
1186 | litter_flux(:,j,m,l+1,k) = litter_flux_old(:,j,m,l+1,k) |
---|
1187 | ENDWHERE |
---|
1188 | ENDDO |
---|
1189 | |
---|
1190 | WHERE ((litter_above_old(:,j,m,k)/(z_litter*1e-3) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1))) .AND. & |
---|
1191 | ((litter_above_flux(:,j,m,k) - litter_below_old(:,j,m,1,k)) .GE. min_stomate)) |
---|
1192 | litter_above(:,j,m,k) = litter_above_old(:,j,m,k) + litter_below_old(:,j,m,1,k) |
---|
1193 | litter_below_old_buffer(:,j,m,1,k) = -litter_below_old(:,j,m,1,k) |
---|
1194 | litter_below(:,j,m,1,k) = zero |
---|
1195 | ELSEWHERE ((litter_above_old(:,j,m,k)/(z_litter*1e-3) .LT. litter_below_old(:,j,m,1,k)/(z_soil(1))) .AND. & |
---|
1196 | ((litter_below_old(:,j,m,1,k) - litter_above_flux(:,j,m,k)) .GT. min_stomate)) |
---|
1197 | litter_above(:,j,m,k) = litter_above_old(:,j,m,k) + litter_above_flux(:,j,m,k) |
---|
1198 | litter_below_old_buffer(:,j,m,1,k) = - litter_above_flux(:,j,m,k) |
---|
1199 | litter_below(:,j,m,1,k) = litter_below_old(:,j,m,1,k) - litter_above_flux(:,j,m,k) |
---|
1200 | ELSEWHERE ((litter_above_old(:,j,m,k)/(z_litter*1e-3) .GT. litter_below_old(:,j,m,1,k)/(z_soil(1))) .AND. & |
---|
1201 | ((litter_above_flux(:,j,m,k) - litter_above_old(:,j,m,k)) .GE. min_stomate)) |
---|
1202 | litter_above(:,j,m,k) = zero |
---|
1203 | litter_below_old_buffer(:,j,m,1,k) = litter_above_old(:,j,m,k) |
---|
1204 | litter_below(:,j,m,1,k) = litter_below_old(:,j,m,1,k) + litter_above_old(:,j,m,k) |
---|
1205 | ELSEWHERE ((litter_above_old(:,j,m,k)/(z_litter*1e-3) .GT. litter_below_old(:,j,m,1,k)/(z_soil(1))) .AND. & |
---|
1206 | ((litter_above_old(:,j,m,k) - litter_above_flux(:,j,m,k)) .GT. min_stomate)) |
---|
1207 | litter_above(:,j,m,k) = litter_above_old(:,j,m,k) - litter_above_flux(:,j,m,k) |
---|
1208 | litter_below_old_buffer(:,j,m,1,k) = litter_above_flux(:,j,m,k) |
---|
1209 | litter_below(:,j,m,1,k) = litter_below_old(:,j,m,1,k) + litter_above_flux(:,j,m,k) |
---|
1210 | ELSEWHERE |
---|
1211 | litter_above(:,j,m,k) = litter_above_old(:,j,m,k) |
---|
1212 | litter_below(:,j,m,1,k) = litter_below_old(:,j,m,1,k) |
---|
1213 | ENDWHERE |
---|
1214 | |
---|
1215 | DO l= 1, nslm-1 ! Loop over soil layers |
---|
1216 | WHERE ((litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l))) .AND. & |
---|
1217 | ((litter_flux(:,j,m,l,k) - litter_below_old(:,j,m,l+1,k)) .GE. min_stomate)) |
---|
1218 | litter_below(:,j,m,l,k) = litter_below_old(:,j,m,l,k) + litter_below_old(:,j,m,l+1,k) + litter_below_old_buffer(:,j,m,l,k) |
---|
1219 | litter_below_old_buffer(:,j,m,l+1,k) = -litter_below_old(:,j,m,l+1,k) |
---|
1220 | litter_below(:,j,m,l+1,k) = zero |
---|
1221 | ELSEWHERE ((litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .LT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l))) .AND. & |
---|
1222 | ((litter_below_old(:,j,m,l+1,k) - litter_flux(:,j,m,l,k)) .GT. min_stomate)) |
---|
1223 | litter_below(:,j,m,l,k) = litter_below_old(:,j,m,l,k) + litter_flux(:,j,m,l,k) + litter_below_old_buffer(:,j,m,l,k) |
---|
1224 | litter_below_old_buffer(:,j,m,l+1,k) = - litter_flux(:,j,m,l,k) |
---|
1225 | litter_below(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k) - litter_flux(:,j,m,l,k) |
---|
1226 | ELSEWHERE ((litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .GT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l))) .AND. & |
---|
1227 | ((litter_flux(:,j,m,l,k) - litter_below_old(:,j,m,l,k)) .GE. min_stomate)) |
---|
1228 | litter_below(:,j,m,l,k) = zero + litter_below_old_buffer(:,j,m,l,k) |
---|
1229 | litter_below_old_buffer(:,j,m,l+1,k) = litter_below_old(:,j,m,l,k) |
---|
1230 | litter_below(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k) + litter_below_old(:,j,m,l,k) |
---|
1231 | ELSEWHERE ((litter_below_old(:,j,m,l,k)/(z_soil(l)-z_soil(l-1)) .GT. litter_below_old(:,j,m,l+1,k)/(z_soil(l+1)-z_soil(l))) .AND. & |
---|
1232 | ((litter_below_old(:,j,m,l,k) - litter_flux(:,j,m,l,k)) .GT. min_stomate)) |
---|
1233 | litter_below(:,j,m,l,k) = litter_below_old(:,j,m,l,k) - litter_flux(:,j,m,l,k) + litter_below_old_buffer(:,j,m,l,k) |
---|
1234 | litter_below_old_buffer(:,j,m,l+1,k) = litter_flux(:,j,m,l,k) |
---|
1235 | litter_below(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k) + litter_flux(:,j,m,l,k) |
---|
1236 | ELSEWHERE |
---|
1237 | litter_below(:,j,m,l,k) = litter_below_old(:,j,m,l,k) |
---|
1238 | litter_below(:,j,m,l+1,k) = litter_below_old(:,j,m,l+1,k) |
---|
1239 | ENDWHERE |
---|
1240 | ENDDO ! End loop over soil layers |
---|
1241 | ENDDO ! End loop over litter pools |
---|
1242 | ENDDO ! End loop over elements |
---|
1243 | ENDDO ! End loop over PFT |
---|
1244 | |
---|
1245 | !! 8. calculate fraction of total soil covered by dead leaves |
---|
1246 | |
---|
1247 | CALL deadleaf (npts, veget_max, dead_leaves, deadleaf_cover) |
---|
1248 | |
---|
1249 | !! 9. Check mass balance closure |
---|
1250 | |
---|
1251 | !! 9.1 Calculate components of the mass balance |
---|
1252 | pool_end_after(:,:,:) = zero |
---|
1253 | pool_end(:,:,:) = zero |
---|
1254 | IF (ld_doc) THEN |
---|
1255 | DO m = 2, nvm |
---|
1256 | DO i = 1,nlitt |
---|
1257 | DO l = 1, nslmd |
---|
1258 | pool_end(:,m,icarbon) = pool_end(:,m,icarbon) + & |
---|
1259 | ( litter_below(:,i,m,l,icarbon) ) * veget_max(:,m) |
---|
1260 | ENDDO |
---|
1261 | ENDDO |
---|
1262 | ENDDO |
---|
1263 | |
---|
1264 | DO m = 2, nvm |
---|
1265 | DO i = 1,nlitt |
---|
1266 | pool_end(:,m,icarbon) = pool_end(:,m,icarbon) + & |
---|
1267 | ( litter_above(:,i,m,icarbon) ) * veget_max(:,m) |
---|
1268 | ENDDO |
---|
1269 | ENDDO |
---|
1270 | |
---|
1271 | |
---|
1272 | !! 9.2 Calculate mass balance |
---|
1273 | ! Note that soilcarbon is transfered to other pools but that the pool |
---|
1274 | ! was not updated. We should not account for it in ::pool_end |
---|
1275 | |
---|
1276 | check_intern(:,:,:,:) = zero |
---|
1277 | check_intern(:,:,iatm2land,icarbon) = zero |
---|
1278 | |
---|
1279 | |
---|
1280 | check_intern(:,:,iland2atm,icarbon) = -un * (resp_hetero_litter(:,:)+resp_hetero_flood(:,:)) * & |
---|
1281 | veget_max(:,:) * dt |
---|
1282 | |
---|
1283 | |
---|
1284 | DO m = 1,nvm |
---|
1285 | DO l = 1, nslmd |
---|
1286 | check_intern(:,m,ilat2out,icarbon) = check_intern(:,m,ilat2out,icarbon) -un * & |
---|
1287 | (soilcarbon_input(:,m,l,imetbel,icarbon)+soilcarbon_input(:,m,l,istrbel,icarbon)) * & |
---|
1288 | veget_max(:,m) * dt |
---|
1289 | ENDDO |
---|
1290 | ENDDO |
---|
1291 | DO m = 1,nvm |
---|
1292 | check_intern(:,m,ilat2out,icarbon) = check_intern(:,m,ilat2out,icarbon) -un * & |
---|
1293 | (soilcarbon_input(:,m,1,imetabo,icarbon)+soilcarbon_input(:,m,1,istrabo,icarbon) & |
---|
1294 | +floodcarbon_input(:,m,iact,icarbon)+floodcarbon_input(:,m,islo,icarbon)) * & |
---|
1295 | veget_max(:,m) * dt |
---|
1296 | ENDDO |
---|
1297 | |
---|
1298 | check_intern(:,:,ilat2in,icarbon) = zero |
---|
1299 | |
---|
1300 | check_intern(:,:,ipoolchange,icarbon) = -un * (pool_end(:,:,icarbon) - & |
---|
1301 | pool_start(:,:,icarbon)) |
---|
1302 | |
---|
1303 | closure_intern = zero |
---|
1304 | DO i = 1,nmbcomp |
---|
1305 | closure_intern(:,:,icarbon) = closure_intern(:,:,icarbon) + & |
---|
1306 | check_intern(:,:,i,icarbon) |
---|
1307 | ENDDO |
---|
1308 | |
---|
1309 | !! 9.3 Write verdict |
---|
1310 | |
---|
1311 | IF (SUM(SUM(closure_intern(:,:,icarbon),2),1) .LT. min_stomate .AND. & |
---|
1312 | SUM(SUM(closure_intern(:,:,icarbon),2),1) .GT. -min_stomate) THEN |
---|
1313 | WRITE(numout,*) 'Mass balance closure in stomate_litter.f90' |
---|
1314 | ELSE |
---|
1315 | WRITE(numout,*) 'Error: mass balance is not closed in stomate_litter.f90' |
---|
1316 | WRITE(numout,*) ' Difference is, ', SUM(SUM(closure_intern(:,:,icarbon),2),1) |
---|
1317 | WRITE(numout,*) ' Difference is, ', closure_intern(:,:,icarbon) |
---|
1318 | ENDIF |
---|
1319 | ENDIF |
---|
1320 | |
---|
1321 | |
---|
1322 | IF (printlev>=4) WRITE(numout,*) 'Leaving littercalc' |
---|
1323 | |
---|
1324 | END SUBROUTINE littercalc |
---|
1325 | |
---|
1326 | |
---|
1327 | !! ==============================================================================================================================\n |
---|
1328 | !! SUBROUTINE : deadleaf |
---|
1329 | !! |
---|
1330 | !>\BRIEF This routine calculates the deadleafcover. |
---|
1331 | !! |
---|
1332 | !! DESCRIPTION : It first calculates the lai corresponding to the dead leaves (LAI) using |
---|
1333 | !! the dead leaves carbon content (DL) the specific leaf area (sla) and the |
---|
1334 | !! maximal coverage fraction of a PFT (vegetmax) using the following equations: |
---|
1335 | !! \latexonly |
---|
1336 | !! \input{deadleaf1.tex} |
---|
1337 | !! \endlatexonly |
---|
1338 | !! \n |
---|
1339 | !! Then, the dead leaf cover (DLC) is calculated as following:\n |
---|
1340 | !! \latexonly |
---|
1341 | !! \input{deadleaf2.tex} |
---|
1342 | !! \endlatexonly |
---|
1343 | !! \n |
---|
1344 | !! |
---|
1345 | !! RECENT CHANGE(S) : None |
---|
1346 | !! |
---|
1347 | !! MAIN OUTPUT VARIABLE: ::deadleaf_cover |
---|
1348 | !! |
---|
1349 | !! REFERENCE(S) : None |
---|
1350 | !! |
---|
1351 | !! FLOWCHART : None |
---|
1352 | !! \n |
---|
1353 | !_ ================================================================================================================================ |
---|
1354 | |
---|
1355 | SUBROUTINE deadleaf (npts, veget_max, dead_leaves, deadleaf_cover) |
---|
1356 | |
---|
1357 | !! 0. Variable and parameter declaration |
---|
1358 | |
---|
1359 | !! 0.1 Input variables |
---|
1360 | |
---|
1361 | INTEGER(i_std), INTENT(in) :: npts !! Domain size - number of grid pixels (unitless) |
---|
1362 | REAL(r_std), DIMENSION(npts,nvm,nlitt), INTENT(in) :: dead_leaves !! Dead leaves per ground unit area, per PFT, |
---|
1363 | !! metabolic and structural |
---|
1364 | !! @tex $(gC m^{-2})$ @endtex |
---|
1365 | REAL(r_std),DIMENSION(npts,nvm),INTENT(in) :: veget_max !! PFT "Maximal" coverage fraction of a PFT defined in |
---|
1366 | !! the input vegetation map |
---|
1367 | !! @tex $(m^2 m^{-2})$ @endtex |
---|
1368 | |
---|
1369 | !! 0.2 Output variables |
---|
1370 | |
---|
1371 | REAL(r_std), DIMENSION(npts), INTENT(out) :: deadleaf_cover !! Fraction of soil covered by dead leaves over all PFTs |
---|
1372 | !! (0-1, unitless) |
---|
1373 | |
---|
1374 | !! 0.3 Modified variables |
---|
1375 | |
---|
1376 | !! 0.4 Local variables |
---|
1377 | |
---|
1378 | REAL(r_std), DIMENSION(npts) :: dead_lai !! LAI of dead leaves @tex $(m^2 m^{-2})$ @endtex |
---|
1379 | INTEGER(i_std) :: j !! Index (unitless) |
---|
1380 | !_ ================================================================================================================================ |
---|
1381 | |
---|
1382 | !! 1. LAI of dead leaves |
---|
1383 | |
---|
1384 | dead_lai(:) = zero |
---|
1385 | |
---|
1386 | DO j = 2,nvm !Loop over PFTs |
---|
1387 | dead_lai(:) = dead_lai(:) + ( dead_leaves(:,j,imetabolic) + dead_leaves(:,j,istructural) ) * sla(j) & |
---|
1388 | * veget_max(:,j) |
---|
1389 | ENDDO |
---|
1390 | |
---|
1391 | !! 2. fraction of soil covered by dead leaves |
---|
1392 | |
---|
1393 | deadleaf_cover(:) = un - exp( - 0.5 * dead_lai(:) ) |
---|
1394 | |
---|
1395 | IF (printlev>=4) WRITE(numout,*) 'Leaving deadleaf' |
---|
1396 | |
---|
1397 | END SUBROUTINE deadleaf |
---|
1398 | |
---|
1399 | |
---|
1400 | !! ================================================================================================================================ |
---|
1401 | !! FUNCTION : control_moist_func_moyano |
---|
1402 | !! |
---|
1403 | !>\BRIEF Calculate moisture control for litter and soild C decomposition |
---|
1404 | !! |
---|
1405 | !! DESCRIPTION : Calculate moisture control factor applied |
---|
1406 | !! to litter decomposition and to soil carbon decomposition in |
---|
1407 | !! stomate_soilcarbon.f90 using the following equation: \n |
---|
1408 | !! \latexonly |
---|
1409 | !! \input{control_moist_func1.tex} |
---|
1410 | !! \endlatexonly |
---|
1411 | !! \n |
---|
1412 | !! with M the moisture control factor and soilmoisutre, the soil moisture |
---|
1413 | !! calculated in sechiba. |
---|
1414 | !! Then, the function is ranged between 0.25 and 1:\n |
---|
1415 | !! \latexonly |
---|
1416 | !! \input{control_moist_func2.tex} |
---|
1417 | !! \endlatexonly |
---|
1418 | !! \n |
---|
1419 | !! RECENT CHANGE(S) : None |
---|
1420 | !! |
---|
1421 | !! RETURN VALUE : ::moistfunc_result |
---|
1422 | !! |
---|
1423 | !! REFERENCE(S) : None |
---|
1424 | !! |
---|
1425 | !! FLOWCHART : None |
---|
1426 | !! \n |
---|
1427 | !_ ================================================================================================================================ |
---|
1428 | |
---|
1429 | FUNCTION control_moist_func_moyano (npts, moist_in,bulk_dens, clay, carbon,veget_max) RESULT (moistfunc_result) |
---|
1430 | |
---|
1431 | !! 0. Variable and parameter declaration |
---|
1432 | |
---|
1433 | !! 0.1 Input variables |
---|
1434 | |
---|
1435 | INTEGER(i_std), INTENT(in) :: npts !! Domain size - number of grid pixel (unitless) |
---|
1436 | REAL(r_std), DIMENSION(npts), INTENT(in) :: moist_in !! relative humidity (unitless) |
---|
1437 | REAL(r_std), DIMENSION(npts), INTENT(in) :: clay !! Clay fraction (unitless, 0-1) |
---|
1438 | REAL(r_std), DIMENSION(npts), INTENT(in) :: bulk_dens !! Variable local of bulk density for the moment must change in the futur (kg m-3) |
---|
1439 | REAL(r_std), DIMENSION(npts,ncarb,nvm,nslmd), INTENT(in) :: carbon !! Soil carbon pools: active, slow, or passive, \f$(gC m^{2})$\f |
---|
1440 | REAL(r_std),DIMENSION(npts,nvm),INTENT(in) :: veget_max !! Maximum fraction of vegetation type including |
---|
1441 | !! non-biological fraction (unitless) |
---|
1442 | |
---|
1443 | !! 0.2 Output variables |
---|
1444 | |
---|
1445 | REAL(r_std), DIMENSION(npts) :: moistfunc_result !! Moisture control factor (0-1, unitless) |
---|
1446 | |
---|
1447 | !! 0.3 Modified variables |
---|
1448 | |
---|
1449 | !! 0.4 Local variables |
---|
1450 | REAL(r_std), DIMENSION(npts) :: total_soc !! Total soil organic carbon for a grid pixel (g-C g-1 soil) |
---|
1451 | INTEGER(i_std) :: k,i,j !! Indices |
---|
1452 | INTEGER, PARAMETER :: nummoist = 120 !! We used numoist then divived by 100. because to calculate the function |
---|
1453 | !! we need to predict PRsr for all the possible soil moisture values |
---|
1454 | REAL(r_std), DIMENSION(npts,nummoist) :: PRsr !! Proportional response or soil respiration at moist_in |
---|
1455 | REAL(r_std), DIMENSION(npts,nummoist) :: SR !! Soil respiration at moist_in to facilitate the understanding regarding |
---|
1456 | !! the Moyano et al paper we keep the same nomenclature than in the paper |
---|
1457 | !! but **BE CAREFUL** it does not correspond to the variable resp_hetero_soil |
---|
1458 | !! or resp_hetero_litter in ORCHIDEE |
---|
1459 | REAL(r_std), DIMENSION(0:nslm) :: z_soil !! Soil levels (m) |
---|
1460 | !$OMP THREADPRIVATE(z_soil) |
---|
1461 | REAL(r_std), DIMENSION(npts,nummoist) :: moistfunc !! An intermediate variable to calculate the Moisture control factor |
---|
1462 | INTEGER(i_std) :: ind !! A local variable to know what is the index of the max value for the statistical function |
---|
1463 | INTEGER(i_std), DIMENSION(npts) :: ind_i !! A local variable to know what is the index of the max value for the |
---|
1464 | !! statistical function at each points |
---|
1465 | REAL(r_std),ALLOCATABLE,SAVE,DIMENSION(:,:) :: moistfunc_below_1 !! A allocatable variable to store the value of moistfunc that are below the max value |
---|
1466 | !! to then rescale at is it done in Moyano et al. 2012 BG |
---|
1467 | !$OMP THREADPRIVATE(moistfunc_below_1) |
---|
1468 | INTEGER(i_std) :: ier !! Check errors in netcdf call (unitless) |
---|
1469 | LOGICAL :: l_error !! Check errors in netcdf call |
---|
1470 | |
---|
1471 | !_ ================================================================================================================================ |
---|
1472 | |
---|
1473 | !! 1.3 soil levels |
---|
1474 | z_soil(0) = zero |
---|
1475 | z_soil(1:nslm) = zlt(1:nslm) |
---|
1476 | |
---|
1477 | ! In Moyano et al. 2012 BG, the function obtained is based on soil |
---|
1478 | ! incubations were litter is generally manually removed, therefore we used |
---|
1479 | ! only the variable carbon corresponding to the soil organic carbon even |
---|
1480 | ! if some litter (metabolic litter) is not easy to remove manually since it |
---|
1481 | ! corresponds to roots exudates. Therefore, we probably underestimate a bit |
---|
1482 | ! the soil organic carbon compared to what is used in Moyano et al., 2012 |
---|
1483 | ! BG. |
---|
1484 | |
---|
1485 | PRsr(:,:) = zero |
---|
1486 | SR(:,:) = zero |
---|
1487 | moistfunc(:,:) = zero |
---|
1488 | l_error = .FALSE. |
---|
1489 | |
---|
1490 | total_soc(:) = zero |
---|
1491 | DO k = 1,nvm |
---|
1492 | DO j = 1,nslm |
---|
1493 | total_soc(:) = total_soc(:) + & |
---|
1494 | ((carbon(:,iactive,k,j)*veget_max(:,k) + & |
---|
1495 | carbon(:,islow,k,j)*veget_max(:,k) + & |
---|
1496 | carbon(:,ipassive,k,j)*veget_max(:,k))* & |
---|
1497 | ((z_soil(j)-z_soil(j-1))/z_soil(nslm))) / & |
---|
1498 | (bulk_dens(:) ) |
---|
1499 | ENDDO |
---|
1500 | ENDDO |
---|
1501 | |
---|
1502 | DO k = 1,nummoist |
---|
1503 | |
---|
1504 | PRsr(:,k) = 1.11066-0.83344*(k/100.) + 1.48095*((k/100.)**2) - 1.02959*((k/100.)**3) + 0.07995*clay(:) + 1.27892*total_soc(:) |
---|
1505 | |
---|
1506 | ENDDO |
---|
1507 | |
---|
1508 | SR(:,1)=PRsr(:,1) |
---|
1509 | DO k=2,nummoist |
---|
1510 | SR(:,k)= SR(:,k-1)* PRsr(:,k) |
---|
1511 | ENDDO |
---|
1512 | |
---|
1513 | DO i = 1,npts |
---|
1514 | DO k= 1, nummoist |
---|
1515 | moistfunc(i,k) = SR(i,k)/MAXVAL(SR(i,:)) |
---|
1516 | ENDDO |
---|
1517 | ENDDO |
---|
1518 | |
---|
1519 | ind_i(:) = MAXLOC(moistfunc(:,:),DIM=2) |
---|
1520 | |
---|
1521 | DO i = 1,npts |
---|
1522 | ind=ind_i(i) |
---|
1523 | |
---|
1524 | ALLOCATE(moistfunc_below_1(npts,ind),stat=ier) |
---|
1525 | l_error = l_error .OR. (ier /= 0) |
---|
1526 | IF (l_error) THEN |
---|
1527 | WRITE(numout,*) 'Memory allocation error for moistfunc_below_1. ' |
---|
1528 | ENDIF |
---|
1529 | |
---|
1530 | DO k= 1,ind |
---|
1531 | moistfunc_below_1(i,k)= moistfunc(i,k) |
---|
1532 | ENDDO |
---|
1533 | |
---|
1534 | DO k= 1,ind |
---|
1535 | moistfunc(i,k)=moistfunc(i,k) - MINVAL(moistfunc_below_1(i,:)) |
---|
1536 | ENDDO |
---|
1537 | |
---|
1538 | DO k= 1,ind |
---|
1539 | moistfunc_below_1(i,k)= moistfunc(i,k) |
---|
1540 | ENDDO |
---|
1541 | |
---|
1542 | DO k=1,ind |
---|
1543 | moistfunc(i,k)=moistfunc(i,k)/MAXVAL(moistfunc_below_1(i,:)) |
---|
1544 | ENDDO |
---|
1545 | |
---|
1546 | IF (ALLOCATED(moistfunc_below_1)) DEALLOCATE(moistfunc_below_1) |
---|
1547 | |
---|
1548 | ENDDO |
---|
1549 | DO i=1,npts |
---|
1550 | IF (NINT(moist_in(i)*100.) .GT. zero) THEN |
---|
1551 | moistfunc_result(i) = moistfunc(i,NINT(moist_in(i)*100.)) |
---|
1552 | ELSE |
---|
1553 | moistfunc_result(i) = zero |
---|
1554 | ENDIF |
---|
1555 | ENDDO |
---|
1556 | |
---|
1557 | END FUNCTION control_moist_func_moyano |
---|
1558 | |
---|
1559 | !! ================================================================================================================================ |
---|
1560 | !! FUNCTION : control_moist_func |
---|
1561 | !! |
---|
1562 | !>\BRIEF Calculate moisture control for litter and soild C decomposition |
---|
1563 | !! |
---|
1564 | !! DESCRIPTION : Calculate moisture control factor applied |
---|
1565 | !! to litter decomposition and to soil carbon decomposition in |
---|
1566 | !! stomate_soilcarbon.f90 using the following equation: \n |
---|
1567 | !! \latexonly |
---|
1568 | !! \input{control_moist_func1.tex} |
---|
1569 | !! \endlatexonly |
---|
1570 | !! \n |
---|
1571 | !! with M the moisture control factor and soilmoisutre, the soil moisture |
---|
1572 | !! calculated in sechiba. |
---|
1573 | !! Then, the function is ranged between 0.25 and 1:\n |
---|
1574 | !! \latexonly |
---|
1575 | !! \input{control_moist_func2.tex} |
---|
1576 | !! \endlatexonly |
---|
1577 | !! \n |
---|
1578 | !! RECENT CHANGE(S) : None |
---|
1579 | !! |
---|
1580 | !! RETURN VALUE : ::moistfunc_result |
---|
1581 | !! |
---|
1582 | !! REFERENCE(S) : None |
---|
1583 | !! |
---|
1584 | !! FLOWCHART : None |
---|
1585 | !! \n |
---|
1586 | !_ ================================================================================================================================ |
---|
1587 | |
---|
1588 | FUNCTION control_moist_func (npts, moist_in) RESULT (moistfunc_result) |
---|
1589 | |
---|
1590 | !! 0. Variable and parameter declaration |
---|
1591 | |
---|
1592 | !! 0.1 Input variables |
---|
1593 | |
---|
1594 | INTEGER(i_std), INTENT(in) :: npts !! Domain size - number of grid pixel (unitless) |
---|
1595 | REAL(r_std), DIMENSION(npts), INTENT(in) :: moist_in !! relative humidity (unitless) |
---|
1596 | |
---|
1597 | |
---|
1598 | !! 0.2 Output variables |
---|
1599 | |
---|
1600 | REAL(r_std), DIMENSION(npts) :: moistfunc_result !! Moisture control factor (0-1, unitless) |
---|
1601 | |
---|
1602 | !! 0.3 Modified variables |
---|
1603 | |
---|
1604 | |
---|
1605 | !_ ================================================================================================================================ |
---|
1606 | |
---|
1607 | |
---|
1608 | moistfunc_result(:) = -moist_coeff(1) * moist_in(:) * moist_in(:) + moist_coeff(2)* moist_in(:) - moist_coeff(3) |
---|
1609 | moistfunc_result(:) = MAX( 0.25_r_std, MIN( un, moistfunc_result(:) ) ) |
---|
1610 | |
---|
1611 | END FUNCTION control_moist_func |
---|
1612 | |
---|
1613 | !! ================================================================================================================================ |
---|
1614 | !! FUNCTION : control_temp_func |
---|
1615 | !! |
---|
1616 | !>\BRIEF Calculate temperature control for litter and soild C decomposition |
---|
1617 | !! |
---|
1618 | !! DESCRIPTION : Calculate temperature control factor applied |
---|
1619 | !! to litter decomposition and to soil carbon decomposition in |
---|
1620 | !! stomate_soilcarbon.f90 using the following equation: \n |
---|
1621 | !! \latexonly |
---|
1622 | !! \input{control_temp_func1.tex} |
---|
1623 | !! \endlatexonly |
---|
1624 | !! \n |
---|
1625 | !! with T the temperature control factor, temp the temperature in Kelvin of |
---|
1626 | !! the air (for aboveground litter) or of the soil (for belowground litter |
---|
1627 | !! and soil) |
---|
1628 | !! Then, the function is limited in its maximal range to 1:\n |
---|
1629 | !! \latexonly |
---|
1630 | !! \input{control_temp_func2.tex} |
---|
1631 | !! \endlatexonly |
---|
1632 | !! \n |
---|
1633 | !! RECENT CHANGE(S) : None |
---|
1634 | !! |
---|
1635 | !! RETURN VALUE: ::tempfunc_result |
---|
1636 | !! |
---|
1637 | !! REFERENCE(S) : None |
---|
1638 | !! |
---|
1639 | !! FLOWCHART : None |
---|
1640 | !! \n |
---|
1641 | !_ ================================================================================================================================ |
---|
1642 | |
---|
1643 | FUNCTION control_temp_func (npts, temp_in,tau) RESULT (tempfunc_result) |
---|
1644 | |
---|
1645 | !! 0. Variable and parameter declaration |
---|
1646 | |
---|
1647 | !! 0.1 Input variables |
---|
1648 | INTEGER(i_std), INTENT(in) :: npts !! Domain size - number of land pixels (unitless) |
---|
1649 | REAL(r_std), DIMENSION(npts), INTENT(in) :: temp_in !! Temperature (K) |
---|
1650 | REAL(r_std), DIMENSION(npts), INTENT(in) :: tau !! residence time of the pool considered (days) |
---|
1651 | !! 0.2 Output variables |
---|
1652 | REAL(r_std), DIMENSION(npts) :: tempfunc_result !! Temperature control factor (0-1, unitless) |
---|
1653 | |
---|
1654 | !! 0.3 Modified variables |
---|
1655 | |
---|
1656 | !! 0.4 Local variables |
---|
1657 | REAL(r_std), DIMENSION(npts) :: Ea !! Activation Energy |
---|
1658 | REAL(r_std), DIMENSION(npts) :: Q10_soil !! Q10 values calculated based on Ea |
---|
1659 | !_ ================================================================================================================================ |
---|
1660 | |
---|
1661 | ! This relationship is based on a reanalysis of the data published by LefÚvre et al. 2014 in global change biology |
---|
1662 | ! We use MAX(cent,(temp_in(:)-ZeroCelsius)*(temp_in(:)-ZeroCelsius)))) because for values between -10 and 10 degC |
---|
1663 | ! the Q10 values are close to infinity |
---|
1664 | ! Ea(:)=a_term_Q10_soil*tau + b_term_Q10_soil |
---|
1665 | ! Q10_soil(:)=exp((dix*Ea(:))/(RR*MAX(cent,(temp_in(:)-ZeroCelsius)*(temp_in(:)-ZeroCelsius)))) |
---|
1666 | ! tempfunc_result(:) = exp( log(Q10_soil(:)) * ( temp_in(:) - (ZeroCelsius+tsoil_ref)) / Q10 ) |
---|
1667 | |
---|
1668 | tempfunc_result(:) = exp( soil_Q10 * ( temp_in(:) - (ZeroCelsius+tsoil_ref)) / Q10 ) |
---|
1669 | tempfunc_result(:) = MIN( un, tempfunc_result(:) ) |
---|
1670 | WHERE (temp_in(:) .LT. zero) |
---|
1671 | tempfunc_result(:) = zero |
---|
1672 | ENDWHERE |
---|
1673 | END FUNCTION control_temp_func |
---|
1674 | |
---|
1675 | END MODULE stomate_litter |
---|