| 1 | import glob |
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| 2 | import sys |
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| 3 | import subprocess |
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| 4 | import os |
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| 5 | import json |
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| 6 | import itertools |
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| 7 | import copy |
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| 8 | |
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| 9 | import netCDF4 |
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| 10 | from netCDF4 import Dataset |
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| 11 | import numpy as np |
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| 12 | |
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| 13 | mode=os.getenv("mode") |
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| 14 | arch=os.getenv("arch") |
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| 15 | enable_mem_track=os.getenv("enable_mem_track") |
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| 16 | svnr=os.getenv("svnR") |
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| 17 | ref_location=os.getenv("ref_location") |
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| 18 | ref_file=os.getenv("ref_file") |
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| 19 | |
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| 20 | |
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| 21 | |
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| 22 | def OSinfo(runthis): |
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| 23 | red = lambda text: '\033[0;31m' + text + '\033[0m' |
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| 24 | osstdout = subprocess.Popen(runthis, shell=True, stdin=subprocess.PIPE, stdout=subprocess.PIPE, stderr=subprocess.PIPE, close_fds=True) |
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| 25 | theInfo, theErr = osstdout.communicate() |
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| 26 | #print(theInfo) |
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| 27 | if theErr: |
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| 28 | print(red(runthis+" FAILED")) |
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| 29 | print(theErr) |
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| 30 | sys.exit() |
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| 31 | |
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| 32 | #def OSinfo(runthis): |
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| 33 | # red = lambda text: '\033[0;31m' + text + '\033[0m' |
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| 34 | # osstdout = subprocess.Popen(runthis, shell=True, stdin=subprocess.PIPE, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, close_fds=True) |
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| 35 | # theInfo = osstdout.communicate()[0].strip() |
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| 36 | # if osstdout.returncode!=0: |
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| 37 | # print(red(runthis+" FAILED")) |
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| 38 | # print(theInfo) |
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| 39 | # sys.exit() |
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| 40 | |
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| 41 | |
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| 42 | |
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| 43 | def nonblank_lines(f): |
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| 44 | for l in f: |
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| 45 | line = l.rstrip() |
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| 46 | if line and not line.startswith("#"): |
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| 47 | yield line |
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| 48 | |
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| 49 | |
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| 50 | def extract_bytes( filename ): |
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| 51 | print( filename ) |
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| 52 | fmem = open(filename, 'r') |
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| 53 | bytes_tot = 0 |
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| 54 | for line in fmem: |
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| 55 | if not line.startswith("***"): |
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| 56 | continue |
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| 57 | |
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| 58 | bytes_line = line.replace("\n", "") |
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| 59 | print( bytes_line.split() ) |
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| 60 | bytes_str = bytes_line.split()[2] |
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| 61 | if (bytes_str.isdigit() ): |
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| 62 | bytes_tot += int( bytes_str ) |
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| 63 | fmem.close() |
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| 64 | |
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| 65 | return bytes_tot |
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| 66 | |
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| 67 | |
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| 68 | def main(): |
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| 69 | ref_list = glob.glob(ref_location+"/*") |
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| 70 | for i in range(len(ref_list)): |
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| 71 | tmp = ref_list[i].split("/") |
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| 72 | rev = tmp[len(tmp)-1] |
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| 73 | ref_list[i] = int(rev) |
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| 74 | ref_list.sort(reverse=True) #ref_list in descending order |
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| 75 | |
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| 76 | ref_rev = "" |
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| 77 | for ref in ref_list: |
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| 78 | if int(svnr) >= ref : |
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| 79 | ref_rev = str(ref) |
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| 80 | print("corresponding reference = ", ref) |
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| 81 | break |
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| 82 | |
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| 83 | if not ref_rev: |
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| 84 | print("no available reference found ... exit") |
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| 85 | return |
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| 86 | |
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| 87 | OSinfo("cp "+ref_location+"/"+ref_rev+"/"+ref_file+" ./") |
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| 88 | OSinfo("tar -zxvf "+ref_location+"/"+ref_rev+"/"+ref_file) |
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| 89 | OSinfo("rm -f "+ref_file) |
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| 90 | |
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| 91 | |
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| 92 | test_folder_list = glob.glob('test_*') |
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| 93 | |
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| 94 | for test_folder in test_folder_list: |
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| 95 | report_filename="" |
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| 96 | # check if test concerns xios features (NetCDF), or memory consumption (mem files) |
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| 97 | files_list="" |
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| 98 | flist = open(test_folder+"/checkfile.def", 'r') |
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| 99 | files_list = flist.read() |
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| 100 | flist.close() |
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| 101 | if ( enable_mem_track==None ) and ( not('.mem' in files_list) ) : |
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| 102 | report_filename = "report_"+svnr+"_"+arch+"_"+mode+".txt" |
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| 103 | elif ( enable_mem_track=='--memtrack full' ) and ( '.mem' in files_list ) : |
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| 104 | #report_filename = "report_"+svnr+"_"+arch+"_"+mode+"_memtrack.txt" |
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| 105 | # -> use same report that for feature test |
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| 106 | report_filename = "report_"+svnr+"_"+arch+"_"+mode+".txt" |
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| 107 | else : |
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| 108 | continue |
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| 109 | |
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| 110 | config_list = glob.glob(test_folder+"/CONFIG_*") |
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| 111 | |
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| 112 | |
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| 113 | with open(test_folder+"/checkfile.def", "r") as fh: |
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| 114 | checkfiles = list(nonblank_lines(fh)) |
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| 115 | |
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| 116 | with open(report_filename, "a") as report: |
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| 117 | for config in config_list: |
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| 118 | folder_name = list(config.split("/"))[0] |
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| 119 | config_name = list(config.split("/"))[1] |
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| 120 | for checkfile in checkfiles: |
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| 121 | if os.path.exists(config+"/"+checkfile) and os.path.exists("reference/ref_"+config+"/"+checkfile): |
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| 122 | if ( enable_mem_track==None ) and ( not('.mem' in files_list) ): # NetCDF |
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| 123 | #OSinfo("cdo -W diffn "+config+"/"+checkfile+" "+"reference/ref_"+config+"/"+checkfile+" 2>&1 |grep -v 'Found more than one time variable'|grep -v 'cdo diffn: Processed'|grep -v 'cdo diffn: Processed'|grep -v 'Time variable >time_counter< not found!' > diff_"+checkfile+".txt") |
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| 124 | #if os.stat("diff_"+checkfile+".txt").st_size==0: # if no diff -> set 0 |
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| 125 | # report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(1)+"\n") |
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| 126 | #else: # if cdo diffn returns diff -> set -1 |
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| 127 | # report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(-1)+"\n") |
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| 128 | ref = Dataset( "reference/ref_"+config+"/"+checkfile ) |
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| 129 | res = Dataset( config+"/"+checkfile ) |
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| 130 | validated = 1 |
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| 131 | np.seterr(divide='ignore', invalid='ignore') |
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| 132 | for var in res.variables: |
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| 133 | print("checkfile = ", checkfile, ", var = ", var) |
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| 134 | if (not (var.startswith('lon_'))) and (not (var.startswith('lat_'))) and (not (var.startswith('time_'))) and (not (var.startswith('atm__')) and (var!="lat") and (var!="lon") ) and \ |
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| 135 | (var!="axis") and (not (var.startswith('axis_')))and (not (var.startswith('domain_'))) and (not (var.startswith('default_pool_id__default_gatherer_id_0__atm__'))): |
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| 136 | ref_interp = ref.variables[var] |
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| 137 | ref_array = ref_interp[:] |
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| 138 | res_interp = res.variables[var] |
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| 139 | res_array = res_interp[:] |
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| 140 | if (res_array.shape == ref_array.shape): |
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| 141 | diff = np.zeros_like( ref_array ) |
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| 142 | np.divide(ref_array-res_array,ref_array,diff,where=(ref_array[:]>10**-15)) |
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| 143 | if ( np.max(np.abs(diff)) > 1*10**-9 ): |
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| 144 | validated = -1 |
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| 145 | diff = np.zeros_like( ref_array ) |
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| 146 | np.divide(ref_array-res_array,res_array,diff,where=(ref_array[:]>10**-15)) |
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| 147 | if ( np.max(np.abs(diff)) > 1*10**-9 ): |
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| 148 | validated = -1 |
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| 149 | else: |
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| 150 | validated = -1 |
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| 151 | report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(validated)+"\n") |
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| 152 | |
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| 153 | elif ( enable_mem_track=='--memtrack full' ) and ( '.mem' in files_list ) : # mem file |
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| 154 | validated = 1 |
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| 155 | ref_memory = extract_bytes( "reference/ref_"+config+"/"+checkfile ) |
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| 156 | res_memory = extract_bytes( config+"/"+checkfile ) |
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| 157 | if ( ref_memory == res_memory ) : |
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| 158 | validated = 1 |
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| 159 | else: |
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| 160 | validated = -1 |
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| 161 | report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(validated)+"\n") |
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| 162 | |
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| 163 | elif os.path.exists(config+"/"+checkfile): # if no ref file -> set 0 |
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| 164 | report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(0)+"\n") |
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| 165 | elif os.path.exists("reference/ref_"+config+"/"+checkfile): # if no output file -> set -2 |
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| 166 | report.write(folder_name+" "+folder_name+"@"+config_name+" "+folder_name+"@"+config_name+"@"+checkfile+" "+str(-2)+"\n") |
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| 167 | |
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| 168 | |
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| 169 | |
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| 170 | if __name__== "__main__": |
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| 171 | main() |
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