/*! \file axis_algorithm_reduce_domain.cpp \author Ha NGUYEN \since 23 June 2016 \date 23 June 2016 \brief Algorithm for reduce a domain to an axis */ #include "axis_algorithm_reduce_domain.hpp" #include "reduce_domain_to_axis.hpp" #include "axis.hpp" #include "domain.hpp" #include "grid.hpp" #include "grid_transformation_factory_impl.hpp" #include "reduction.hpp" namespace xios { shared_ptr CAxisAlgorithmReduceDomain::create(bool isSource, CGrid* gridDst, CGrid* gridSrc, CTransformation* transformation, int elementPositionInGrid, std::map& elementPositionInGridSrc2ScalarPosition, std::map& elementPositionInGridSrc2AxisPosition, std::map& elementPositionInGridSrc2DomainPosition, std::map& elementPositionInGridDst2ScalarPosition, std::map& elementPositionInGridDst2AxisPosition, std::map& elementPositionInGridDst2DomainPosition) TRY { std::vector axisListDestP = gridDst->getAxis(); std::vector domainListSrcP = gridSrc->getDomains(); CReduceDomainToAxis* reduceDomain = dynamic_cast (transformation); int axisDstIndex = elementPositionInGridDst2AxisPosition[elementPositionInGrid]; int domainSrcIndex = elementPositionInGridSrc2DomainPosition[elementPositionInGrid]; return make_shared(isSource, axisListDestP[axisDstIndex], domainListSrcP[domainSrcIndex], reduceDomain); } CATCH bool CAxisAlgorithmReduceDomain::dummyRegistered_ = CAxisAlgorithmReduceDomain::registerTrans(); bool CAxisAlgorithmReduceDomain::registerTrans() TRY { return CGridTransformationFactory::registerTransformation(TRANS_REDUCE_DOMAIN_TO_AXIS, create); } CATCH CAxisAlgorithmReduceDomain::CAxisAlgorithmReduceDomain(bool isSource, CAxis* axisDestination, CDomain* domainSource, CReduceDomainToAxis* algo) : CAlgorithmTransformationReduce(isSource), domainSrc_(domainSource), axisDest_(axisDestination) TRY { switch (algo->operation) { case CReduceDomainToAxis::operation_attr::sum: operator_ = EReduction::sum; break; case CReduceDomainToAxis::operation_attr::min: operator_ = EReduction::min; break; case CReduceDomainToAxis::operation_attr::max: operator_ = EReduction::max; break; case CReduceDomainToAxis::operation_attr::average: operator_ = EReduction::average; break; default: ERROR("CAxisAlgorithmReduceDomain::CAxisAlgorithmReduceDomain(CAxis* axisDestination, CDomain* domainSource, CReduceDomainToAxis* algo)", << "Operation is wrongly defined. Supported operations: sum, min, max, average." << std::endl << "Domain source " <getId() << std::endl << "Axis destination " << axisDestination->getId()); } algo->checkValid(axisDestination, domainSource); dir_ = (CReduceDomainToAxis::direction_attr::iDir == algo->direction) ? iDir : jDir; bool local = false; if (!algo->local.isEmpty()) local=algo->local ; size_t nj_glo = domainSource->nj_glo ; size_t ni_glo = domainSource->ni_glo ; bool validAxis = axisDestination->checkGeometricAttributes(false) ; if (validAxis && !local) { axisDestination->checkAttributes() ; if (dir_==jDir) { if (axisDestination->n_glo != domainSource->nj_glo) ERROR("CAxisAlgorithmReduceDomain::CAxisAlgorithmReduceDomain(bool isSource, CAxis* axisDestination, CDomain* domainSource, CReduceDomainToAxis* algo)", << "Extract domain along j, axis destination should have n_glo equal to nj_glo of domain source" << "Domain source " <getId() << " has nj_glo " << domainSource->nj_glo << std::endl << "Axis destination " << axisDestination->getId() << " has n_glo " << axisDestination->n_glo) } else { if (axisDestination->n_glo != domainSource->ni_glo) ERROR("CAxisAlgorithmReduceDomain::CAxisAlgorithmReduceDomain(bool isSource, CAxis* axisDestination, CDomain* domainSource, CReduceDomainToAxis* algo)", << "Extract domain along j, axis destination should have n_glo equal to ni_glo of domain source" << "Domain source " <getId() << " has ni_glo " << domainSource->ni_glo << std::endl << "Axis destination " << axisDestination->getId() << " has n_glo " << axisDestination->n_glo); } } else { // create axis destination from source domain axisDestination->resetGeometricAttributes(); if (dir_== jDir) { axisDestination->n_glo = domainSource->nj_glo ; CArray srcGlobalIndex ; set indexFullView; set indexWorkflowView; domainSource->getLocalView(CElementView::FULL)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; igetLocalView(CElementView::WORKFLOW)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; i n = indexFullView.size() ; axisDestination-> index.resize(axisDestination-> n) ; axisDestination-> mask.resize(axisDestination-> n) ; map globalToLocalIndex ; auto it=indexFullView.begin(); for(int i=0; it!=indexFullView.end(); ++i,++it) { axisDestination->index(i) = *it ; if (indexWorkflowView.count(*it)==0) axisDestination->mask(i) = false ; else axisDestination->mask(i) = true ; globalToLocalIndex[*it] = i ; } if (domainSource->hasLonLat && domainSource->type == CDomain::type_attr::rectilinear) { axisDestination->value.resize(axisDestination-> n) ; axisDestination->axis_type.setValue(CAxis::axis_type_attr::Y) ; if (domainSource->hasBounds) axisDestination-> bounds.resize(axisDestination-> n, 2) ; domainSource->getLocalView(CElementView::FULL)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; ivalue(globalToLocalIndex[srcGlobalIndex(i)/ni_glo]) = domainSource->latvalue(i) ; if (domainSource->hasBounds) { axisDestination->bounds(globalToLocalIndex[srcGlobalIndex(i)/ni_glo,0]) = domainSource->bounds_latvalue(i,0) ; axisDestination->bounds(globalToLocalIndex[srcGlobalIndex(i)/ni_glo,1]) = domainSource->bounds_latvalue(i,1) ; } } } } else // dir_== iDir { axisDestination->n_glo = domainSource->ni_glo ; CArray srcGlobalIndex ; set indexFullView; set indexWorkflowView; domainSource->getLocalView(CElementView::FULL)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; igetLocalView(CElementView::WORKFLOW)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; i n = indexFullView.size() ; axisDestination-> index.resize(axisDestination-> n) ; axisDestination-> mask.resize(axisDestination-> n) ; map globalToLocalIndex ; auto it=indexFullView.begin(); for(int i=0; it!=indexFullView.end(); ++i,++it) { axisDestination->index(i) = *it ; if (indexWorkflowView.count(*it)==0) axisDestination->mask(i) = false ; else axisDestination->mask(i) = true ; globalToLocalIndex[*it] = i ; } if (domainSource->hasLonLat && domainSource->type == CDomain::type_attr::rectilinear) { axisDestination-> value.resize(axisDestination-> n) ; axisDestination-> axis_type.setValue(CAxis::axis_type_attr::X) ; if (domainSource->hasBounds) axisDestination->bounds.resize(axisDestination-> n, 2) ; domainSource->getLocalView(CElementView::FULL)->getGlobalIndexView(srcGlobalIndex) ; for(int i=0; ivalue(globalToLocalIndex[srcGlobalIndex(i)%ni_glo]) = domainSource->lonvalue(i) ; if (domainSource->hasBounds) { axisDestination->bounds(globalToLocalIndex[srcGlobalIndex(i)%ni_glo,0]) = domainSource->bounds_lonvalue(i,0) ; axisDestination->bounds(globalToLocalIndex[srcGlobalIndex(i)%ni_glo,1]) = domainSource->bounds_lonvalue(i,1) ; } } } } axisDestination->checkAttributes() ; } // compute needed index for tranformation TransformationIndexMap& transMap = transformationMapping_; CArray srcGlobalIndex ; domainSource->getLocalView(CElementView::WORKFLOW)->getGlobalIndexView(srcGlobalIndex) ; CArray dstGlobalIndex ; axisDestination->getLocalView(CElementView::WORKFLOW)->getGlobalIndexView(dstGlobalIndex) ; if (local) { set dstGlobalIndexSet ; for(int i=0; i& axisDstIndex = axisDest_->index; int ni_glo = domainSrc_->ni_glo, nj_glo = domainSrc_->nj_glo; if (iDir == dir_) { if (local) { const CArray& i_index = domainSrc_-> i_index.getValue() ; const CArray& j_index = domainSrc_-> j_index.getValue() ; const CArray& localMask = domainSrc_-> localMask ; int nbDomainIdx = i_index.numElements(); for (int idxDomain = 0; idxDomain < nbDomainIdx; ++idxDomain) { if (localMask(idxDomain)) { transMap[j_index(idxDomain)].push_back(j_index(idxDomain)* ni_glo + i_index(idxDomain)); } } } else { int nbAxisIdx = axisDstIndex.numElements(); for (int idxAxis = 0; idxAxis < nbAxisIdx; ++idxAxis) { int globalAxisIdx = axisDstIndex(idxAxis); transMap[globalAxisIdx].resize(ni_glo); for (int idx = 0; idx < ni_glo; ++idx) { transMap[globalAxisIdx][idx] = globalAxisIdx * ni_glo + idx; } } } } else if (jDir == dir_) { int nbAxisIdx = axisDstIndex.numElements(); if (local) { const CArray& i_index = domainSrc_-> i_index.getValue() ; const CArray& j_index = domainSrc_-> j_index.getValue() ; const CArray& localMask = domainSrc_-> localMask ; int nbDomainIdx = i_index.numElements(); for (int idxDomain = 0; idxDomain < nbDomainIdx; ++idxDomain) { if (localMask(idxDomain)) { transMap[i_index(idxDomain)].push_back(j_index(idxDomain)* ni_glo + i_index(idxDomain)); } } } else { for (int idxAxis = 0; idxAxis < nbAxisIdx; ++idxAxis) { int globalAxisIdx = axisDstIndex(idxAxis); transMap[globalAxisIdx].resize(nj_glo); for (int idx = 0; idx < nj_glo; ++idx) { transMap[globalAxisIdx][idx] = globalAxisIdx + ni_glo*idx; } } } } else {} axisDestination->checkAttributes() ; */ this->computeAlgorithm(domainSource->getLocalView(CElementView::WORKFLOW), axisDestination->getLocalView(CElementView::WORKFLOW)) ; } CATCH CAxisAlgorithmReduceDomain::~CAxisAlgorithmReduceDomain() TRY { } CATCH }