1 | #ifndef __XMLIO_INETCDF4__ |
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2 | #define __XMLIO_INETCDF4__ |
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3 | |
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4 | /// xios headers /// |
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5 | #include "xmlioserver_spl.hpp" |
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6 | #include "exception.hpp" |
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7 | #include "array.hpp" |
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8 | #include "data_output.hpp" |
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9 | |
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10 | #include <mpi.h> |
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11 | #define MPI_INCLUDED |
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12 | #include <netcdf.h> |
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13 | #ifdef NETCDF_PAR_HEADER |
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14 | extern "C" { |
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15 | #include <netcdf_par.h> |
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16 | } |
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17 | #endif |
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18 | |
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19 | |
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20 | #ifndef UNLIMITED_DIM |
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21 | #define UNLIMITED_DIM (size_t)(-1) |
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22 | #endif //UNLIMITED_DIM |
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23 | |
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24 | namespace xios |
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25 | { |
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26 | /// ////////////////////// Déclarations ////////////////////// /// |
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27 | class CONetCDF4 |
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28 | : public virtual CDataOutput |
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29 | { |
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30 | public : |
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31 | |
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32 | /// Définition de type /// |
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33 | typedef std::vector<StdString> CONetCDF4Path; |
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34 | |
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35 | /// Constructeurs /// |
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36 | CONetCDF4(const StdString & filename, bool exist, const MPI_Comm * comm = NULL, bool multifile=true); |
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37 | |
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38 | CONetCDF4(const CONetCDF4 & onetcdf4); // Not implemented. |
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39 | CONetCDF4(const CONetCDF4 * const onetcdf4); // Not implemented. |
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40 | |
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41 | |
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42 | /// Initialisation /// |
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43 | void initialize(const StdString & filename, bool exist, const MPI_Comm * comm, bool multifile); |
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44 | void close(void) ; |
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45 | void sync(void) ; |
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46 | void definition_start(void); |
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47 | void definition_end(void); |
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48 | |
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49 | /// Mutateurs /// |
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50 | void setCurrentPath(const CONetCDF4Path & path); |
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51 | |
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52 | int addGroup(const StdString & name); |
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53 | int addDimension(const StdString& name, const StdSize size = UNLIMITED_DIM); |
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54 | int addVariable(const StdString & name, nc_type type, |
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55 | const std::vector<StdString> & dim); |
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56 | |
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57 | //---------------------------------------------------------------- |
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58 | public : |
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59 | |
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60 | template <class T> |
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61 | void setDefaultValue(const StdString & varname, const T * value = NULL); |
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62 | |
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63 | template <class T> |
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64 | void addAttribute |
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65 | (const StdString & name, const T & value, const StdString * varname = NULL); |
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66 | |
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67 | /// Ecriture des données /// |
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68 | template <class T, StdSize ndim> |
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69 | void writeData(const ARRAY(T, ndim) data, const StdString & name, |
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70 | bool collective, StdSize record, |
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71 | const std::vector<StdSize> * start = NULL, |
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72 | const std::vector<StdSize> * count = NULL); |
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73 | |
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74 | void writeData(const ARRAY(int, 2) data, const StdString & name); |
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75 | |
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76 | /// Accesseur /// |
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77 | const CONetCDF4Path & getCurrentPath(void) const; |
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78 | |
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79 | /// Destructeur /// |
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80 | virtual ~CONetCDF4(void); |
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81 | |
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82 | //---------------------------------------------------------------- |
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83 | |
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84 | protected : |
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85 | |
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86 | /// Ecriture /// |
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87 | virtual void writeField_ (CField* field) = 0; |
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88 | virtual void writeDomain_(CDomain* domain) = 0; |
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89 | virtual void writeAxis_ (CAxis* axis) = 0; |
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90 | |
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91 | /// Accesseurs /// |
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92 | int getCurrentGroup(void); |
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93 | int getGroup(const CONetCDF4Path & path); |
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94 | int getVariable(const StdString & varname); |
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95 | int getDimension(const StdString & dimname); |
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96 | std::vector<StdSize> getDimensions (const StdString & varname); |
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97 | std::vector<StdString> getDimensionsIdList (const StdString * varname); |
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98 | int getUnlimitedDimension(void); |
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99 | StdString getUnlimitedDimensionName(void); |
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100 | |
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101 | bool varExist(const StdString & varname); |
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102 | |
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103 | //---------------------------------------------------------------- |
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104 | |
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105 | private : |
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106 | |
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107 | template <class T> |
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108 | void writeData_(int grpid, int varid, |
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109 | const std::vector<StdSize> & sstart, |
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110 | const std::vector<StdSize> & scount, T * data); |
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111 | |
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112 | void getWriteDataInfos(const StdString & name, StdSize record, StdSize & array_size, |
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113 | std::vector<StdSize> & sstart, |
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114 | std::vector<StdSize> & scount, |
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115 | const std::vector<StdSize> * start, |
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116 | const std::vector<StdSize> * count); |
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117 | |
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118 | /// Vérification des erreurs NetCDF /// |
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119 | void CheckError(int status); |
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120 | |
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121 | /// Propriétés privées /// |
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122 | CONetCDF4Path path; |
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123 | int ncidp; |
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124 | bool wmpi; |
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125 | |
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126 | }; // class CONetCDF4 |
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127 | |
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128 | ///--------------------------------------------------------------- |
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129 | |
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130 | |
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131 | |
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132 | } // namespace xios |
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133 | |
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134 | #endif //__XMLIO_INETCDF4__ |
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