[591] | 1 | #ifndef __XIOS_CGrid__ |
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| 2 | #define __XIOS_CGrid__ |
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[219] | 3 | |
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[591] | 4 | /// XIOS headers /// |
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| 5 | #include "xios_spl.hpp" |
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[219] | 6 | #include "group_factory.hpp" |
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| 7 | |
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| 8 | #include "declare_group.hpp" |
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| 9 | #include "domain.hpp" |
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| 10 | #include "axis.hpp" |
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[369] | 11 | #include "array_new.hpp" |
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| 12 | #include "attribute_array.hpp" |
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[552] | 13 | #include "distribution_server.hpp" |
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[553] | 14 | #include "client_server_mapping.hpp" |
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[567] | 15 | #include "utils.hpp" |
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[619] | 16 | #include "transformation_enum.hpp" |
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[219] | 17 | |
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[335] | 18 | namespace xios { |
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[509] | 19 | |
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[219] | 20 | /// ////////////////////// Déclarations ////////////////////// /// |
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| 21 | |
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| 22 | class CGridGroup; |
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| 23 | class CGridAttributes; |
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[540] | 24 | class CDomainGroup; |
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| 25 | class CAxisGroup; |
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[219] | 26 | class CGrid; |
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[551] | 27 | class CDistributionClient; |
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[552] | 28 | class CDistributionServer; |
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[553] | 29 | class CServerDistributionDescription; |
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| 30 | class CClientServerMapping; |
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[620] | 31 | class CGridTransformation; |
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[219] | 32 | |
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| 33 | ///-------------------------------------------------------------- |
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| 34 | |
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| 35 | // Declare/Define CGridAttribute |
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| 36 | BEGIN_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 37 | # include "grid_attribute.conf" |
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| 38 | END_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 39 | |
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| 40 | ///-------------------------------------------------------------- |
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| 41 | |
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| 42 | class CGrid |
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| 43 | : public CObjectTemplate<CGrid> |
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| 44 | , public CGridAttributes |
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| 45 | { |
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| 46 | /// typedef /// |
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| 47 | typedef CObjectTemplate<CGrid> SuperClass; |
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| 48 | typedef CGridAttributes SuperClassAttribute; |
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| 49 | |
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| 50 | public : |
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| 51 | |
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| 52 | typedef CGridAttributes RelAttributes; |
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| 53 | typedef CGridGroup RelGroup; |
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| 54 | |
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[300] | 55 | enum EEventId |
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| 56 | { |
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[540] | 57 | EVENT_ID_INDEX, EVENT_ID_ADD_DOMAIN, EVENT_ID_ADD_AXIS |
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[650] | 58 | }; |
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[509] | 59 | |
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[619] | 60 | enum EElementType |
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| 61 | { |
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| 62 | GRID_ONLY_AXIS, GRID_ONLY_DOMAIN, GRID_AXIS_DOMAIN |
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| 63 | }; |
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| 64 | |
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[219] | 65 | /// Constructeurs /// |
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| 66 | CGrid(void); |
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[650] | 67 | explicit CGrid(const StdString& id); |
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| 68 | CGrid(const CGrid& grid); // Not implemented yet. |
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| 69 | CGrid(const CGrid* const grid); // Not implemented yet. |
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[219] | 70 | |
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| 71 | /// Traitements /// |
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[509] | 72 | // void solveReference(void); |
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[219] | 73 | |
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[509] | 74 | void solveDomainAxisRef(bool areAttributesChecked); |
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| 75 | |
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| 76 | void checkMaskIndex(bool doCalculateIndex); |
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| 77 | |
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[650] | 78 | // virtual void toBinary (StdOStream& os) const; |
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| 79 | // virtual void fromBinary(StdIStream& is); |
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[219] | 80 | |
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| 81 | /// Tests /// |
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| 82 | bool hasAxis(void) const; |
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| 83 | |
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| 84 | public : |
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| 85 | |
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| 86 | /// Accesseurs /// |
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| 87 | StdSize getDimension(void) const; |
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[509] | 88 | |
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[286] | 89 | StdSize getDataSize(void) const; |
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[219] | 90 | |
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| 91 | /// Entrées-sorties de champs /// |
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[369] | 92 | template <int n> |
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[593] | 93 | void inputField(const CArray<double,n>& field, CArray<double,1>& stored) const; |
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| 94 | template <int n> |
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| 95 | void outputField(const CArray<double,1>& stored, CArray<double,n>& field) const; |
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[509] | 96 | |
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[599] | 97 | void outputField(int rank, const CArray<double,1>& stored, double* field); |
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| 98 | void inputField(int rank, const double* const field, CArray<double,1>& stored); |
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[509] | 99 | |
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[650] | 100 | virtual void parse(xml::CXMLNode& node); |
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[540] | 101 | |
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[219] | 102 | /// Destructeur /// |
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| 103 | virtual ~CGrid(void); |
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| 104 | |
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| 105 | public : |
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| 106 | |
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| 107 | /// Accesseurs statiques /// |
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| 108 | static StdString GetName(void); |
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| 109 | static StdString GetDefName(void); |
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[509] | 110 | |
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[219] | 111 | static ENodeType GetType(void); |
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| 112 | |
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| 113 | /// Instanciateurs Statiques /// |
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[347] | 114 | static CGrid* createGrid(CDomain* domain); |
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| 115 | static CGrid* createGrid(CDomain* domain, CAxis* axis); |
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[622] | 116 | static CGrid* createGrid(std::vector<CDomain*> domains, std::vector<CAxis*> axis, CArray<bool,1> axisDomainOrder = CArray<bool,1>()); |
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[219] | 117 | |
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[300] | 118 | public : |
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[219] | 119 | |
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| 120 | /// Entrées-sorties de champs (interne) /// |
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[650] | 121 | void storeField_arr(const double* const data, CArray<double,1>& stored) const; |
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| 122 | void restoreField_arr(const CArray<double,1>& stored, double* const data) const; |
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[219] | 123 | |
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| 124 | /// Traitements protégés /// |
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| 125 | void computeIndexServer(void); |
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| 126 | void computeIndex(void); |
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[586] | 127 | void computeIndexScalarGrid(); |
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[219] | 128 | |
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[509] | 129 | void solveDomainRef(bool checkAtt); |
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| 130 | void solveAxisRef(bool checkAtt); |
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[540] | 131 | void solveDomainAxisRefInheritance(bool apply = true); |
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[619] | 132 | void solveTransformations(); |
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[509] | 133 | |
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[540] | 134 | void sendAddDomain(const std::string& id=""); |
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| 135 | void sendAddAxis(const std::string& id=""); |
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| 136 | void sendAllDomains(); |
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| 137 | void sendAllAxis(); |
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| 138 | |
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[650] | 139 | static void recvAddDomain(CEventServer& event); |
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| 140 | void recvAddDomain(CBufferIn& buffer); |
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| 141 | static void recvAddAxis(CEventServer& event); |
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| 142 | void recvAddAxis(CBufferIn& buffer); |
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[540] | 143 | |
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[650] | 144 | static bool dispatchEvent(CEventServer& event); |
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| 145 | static void recvIndex(CEventServer& event); |
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| 146 | void recvIndex(vector<int> ranks, vector<CBufferIn*> buffers); |
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| 147 | void sendIndex(void); |
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[586] | 148 | void sendIndexScalarGrid(); |
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[509] | 149 | |
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| 150 | void computeDomConServer(); |
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| 151 | std::map<int, int> getDomConServerSide(); |
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| 152 | std::map<int, StdSize> getConnectedServerDataSize(); |
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[540] | 153 | std::vector<StdString> getDomainList(); |
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| 154 | std::vector<StdString> getAxisList(); |
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| 155 | std::vector<CDomain*> getDomains(); |
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| 156 | std::vector<CAxis*> getAxis(); |
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[551] | 157 | std::vector<int> getAxisOrder(); |
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[567] | 158 | std::vector<int> getGlobalDimension(); |
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[600] | 159 | bool isScalarGrid() const; |
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[620] | 160 | std::vector<int> getAxisPositionInGrid() const; |
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[540] | 161 | |
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[567] | 162 | bool doGridHaveDataToWrite(); |
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| 163 | bool doGridHaveDataDistributed(); |
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| 164 | size_t getWrittenDataSize() const; |
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| 165 | |
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| 166 | const CDistributionServer* getDistributionServer() const; |
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[620] | 167 | const CDistributionClient* getDistributionClient() const; |
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| 168 | CGridTransformation* getTransformations(); |
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[567] | 169 | |
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[632] | 170 | void transformGrid(CGrid* transformGridSrc); |
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[619] | 171 | bool isTransformed(); |
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| 172 | void setTransformed(); |
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| 173 | |
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[219] | 174 | public: |
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| 175 | |
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| 176 | /// Propriétés privées /// |
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| 177 | bool isChecked; |
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[509] | 178 | bool isDomainAxisChecked; |
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[551] | 179 | bool isIndexSent; |
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[219] | 180 | |
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[650] | 181 | CArray<int, 1> storeIndex_client; |
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[509] | 182 | |
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[650] | 183 | map<int, CArray<int, 1> > storeIndex_toSrv; |
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| 184 | map<int,int> nbSenders; |
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[509] | 185 | |
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[650] | 186 | map<int, CArray<size_t, 1> > outIndexFromClient; |
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| 187 | void checkMask(void); |
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[623] | 188 | void modifyMask(const CArray<int,1>& indexToModify); |
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[509] | 189 | |
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[540] | 190 | private: |
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[567] | 191 | template<int N> |
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| 192 | void checkGridMask(CArray<bool,N>& gridMask, |
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[664] | 193 | const std::vector<CArray<bool,1>* >& domainMasks, |
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[567] | 194 | const std::vector<CArray<bool,1>* >& axisMasks, |
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| 195 | const CArray<bool,1>& axisDomainOrder); |
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[623] | 196 | template<int N> |
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| 197 | void modifyGridMask(CArray<bool,N>& gridMask, const CArray<int,1>& indexToModify); |
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| 198 | |
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[540] | 199 | void setVirtualDomainGroup(CDomainGroup* newVDomainGroup); |
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| 200 | void setVirtualDomainGroup(); |
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| 201 | void setVirtualAxisGroup(CAxisGroup* newVAxisGroup); |
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| 202 | void setVirtualAxisGroup(); |
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[567] | 203 | |
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[540] | 204 | void setAxisList(const std::vector<CAxis*> axis = std::vector<CAxis*>()); |
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| 205 | void setDomainList(const std::vector<CDomain*> domains = std::vector<CDomain*>()); |
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| 206 | |
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[567] | 207 | void computeGridGlobalDimension(const std::vector<CDomain*>& domains, |
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| 208 | const std::vector<CAxis*>& axis, |
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| 209 | const CArray<bool,1>& axisDomainOrder); |
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| 210 | |
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[540] | 211 | CDomain* addDomain(const std::string& id); |
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| 212 | CAxis* addAxis(const std::string& id); |
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| 213 | |
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| 214 | CAxisGroup* getVirtualAxisGroup() const; |
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| 215 | CDomainGroup* getVirtualDomainGroup() const; |
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[619] | 216 | |
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[657] | 217 | void checkAttributesAfterTransformation(); |
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[619] | 218 | |
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[657] | 219 | |
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[619] | 220 | void setTransformationAlgorithms(); |
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| 221 | |
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[567] | 222 | std::vector<int> globalDim_; |
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[540] | 223 | private: |
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| 224 | CDomainGroup* vDomainGroup_; |
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| 225 | CAxisGroup* vAxisGroup_; |
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| 226 | std::vector<std::string> axisList_, domList_; |
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| 227 | bool isAxisListSet, isDomListSet; |
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[567] | 228 | |
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[551] | 229 | CDistributionClient* clientDistribution_; |
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[552] | 230 | CDistributionServer* serverDistribution_; |
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[568] | 231 | CClientServerMapping* clientServerMap_; |
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[567] | 232 | size_t writtenDataSize_; |
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[584] | 233 | std::map<int,size_t> connectedDataSize_; |
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| 234 | std::vector<int> connectedServerRank_; |
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[586] | 235 | bool isDataDistributed_; |
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[657] | 236 | int positionDimensionDistributed_; |
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[619] | 237 | |
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| 238 | bool isTransformed_; |
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[620] | 239 | std::vector<int> axisPositionInGrid_; |
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| 240 | CGridTransformation* transformations_; |
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[219] | 241 | }; // class CGrid |
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| 242 | |
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| 243 | ///-------------------------------------------------------------- |
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| 244 | |
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[369] | 245 | template <int n> |
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[567] | 246 | void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const |
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[219] | 247 | { |
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[369] | 248 | if (this->getDataSize() != field.numElements()) |
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| 249 | ERROR("void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const", |
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[421] | 250 | << "[ Awaiting size of the data = " << this->getDataSize() << ", " |
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| 251 | << "Received data size = " << field.numElements() << " ] " |
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| 252 | << "The array of data has not the good size !") |
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[650] | 253 | this->storeField_arr(field.dataFirst(), stored); |
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[219] | 254 | } |
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| 255 | |
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[593] | 256 | template <int n> |
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| 257 | void CGrid::outputField(const CArray<double,1>& stored, CArray<double,n>& field) const |
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| 258 | { |
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| 259 | if (this->getDataSize() != field.numElements()) |
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| 260 | ERROR("void CGrid::outputField(const CArray<double,1>& stored, CArray<double,n>& field) const", |
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| 261 | << "[ Size of the data = " << this->getDataSize() << ", " |
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| 262 | << "Output data size = " << field.numElements() << " ] " |
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| 263 | << "The ouput array does not have not the right size!") |
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| 264 | this->restoreField_arr(stored, field.dataFirst()); |
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| 265 | } |
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| 266 | |
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[567] | 267 | template<int N> |
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| 268 | void CGrid::checkGridMask(CArray<bool,N>& gridMask, |
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[664] | 269 | const std::vector<CArray<bool,1>* >& domainMasks, |
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[567] | 270 | const std::vector<CArray<bool,1>* >& axisMasks, |
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| 271 | const CArray<bool,1>& axisDomainOrder) |
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| 272 | { |
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| 273 | int idx = 0; |
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| 274 | int numElement = axisDomainOrder.numElements(); |
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[650] | 275 | int dim = domainMasks.size() * 2 + axisMasks.size(); |
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[664] | 276 | std::vector<CDomain*> domainP = this->getDomains(); |
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[567] | 277 | |
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| 278 | std::vector<int> idxLoop(dim,0), indexMap(numElement), eachDimSize(dim); |
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| 279 | std::vector<int> currentIndex(dim); |
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| 280 | int idxDomain = 0, idxAxis = 0; |
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| 281 | for (int i = 0; i < numElement; ++i) |
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| 282 | { |
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| 283 | indexMap[i] = idx; |
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| 284 | if (true == axisDomainOrder(i)) { |
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[664] | 285 | eachDimSize[indexMap[i]] = domainP[idxDomain]->ni; |
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| 286 | eachDimSize[indexMap[i]+1] = domainP[idxDomain]->nj; |
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[567] | 287 | idx += 2; ++idxDomain; |
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| 288 | } |
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| 289 | else { |
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| 290 | eachDimSize[indexMap[i]] = axisMasks[idxAxis]->numElements(); |
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| 291 | ++idx; ++idxAxis; |
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| 292 | } |
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| 293 | } |
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| 294 | |
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| 295 | if (!gridMask.isEmpty()) |
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| 296 | { |
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| 297 | for (int i = 0; i < dim; ++i) |
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| 298 | { |
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| 299 | if (gridMask.extent(i) != eachDimSize[i]) |
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| 300 | ERROR("CGrid::checkMask(void)", |
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| 301 | <<"The mask has one dimension whose size is different from the one of the local grid"<<endl |
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| 302 | <<"Local size is "<< i << " " << eachDimSize[i]<<endl |
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| 303 | <<"Mask dimension size is "<<gridMask.extent(i)); |
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| 304 | } |
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| 305 | } |
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| 306 | else { |
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| 307 | CArrayBoolTraits<CArray<bool,N> >::resizeArray(gridMask,eachDimSize); |
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| 308 | gridMask = true; |
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| 309 | } |
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| 310 | |
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| 311 | int ssize = gridMask.numElements(); |
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| 312 | idx = 0; |
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| 313 | while (idx < ssize) |
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| 314 | { |
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| 315 | for (int i = 0; i < dim-1; ++i) |
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| 316 | { |
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| 317 | if (idxLoop[i] == eachDimSize[i]) |
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| 318 | { |
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| 319 | idxLoop[i] = 0; |
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| 320 | ++idxLoop[i+1]; |
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| 321 | } |
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| 322 | } |
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| 323 | |
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| 324 | // Find out outer index |
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| 325 | idxDomain = idxAxis = 0; |
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| 326 | bool maskValue = true; |
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| 327 | for (int i = 0; i < numElement; ++i) |
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| 328 | { |
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| 329 | if (axisDomainOrder(i)) |
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| 330 | { |
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[664] | 331 | maskValue = maskValue && (*domainMasks[idxDomain])(idxLoop[indexMap[i]] + idxLoop[indexMap[i]+1] * eachDimSize[indexMap[i]]); |
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[567] | 332 | ++idxDomain; |
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| 333 | } |
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| 334 | else |
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| 335 | { |
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| 336 | maskValue = maskValue && (*axisMasks[idxAxis])(idxLoop[indexMap[i]]); |
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| 337 | ++idxAxis; |
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| 338 | } |
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| 339 | } |
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| 340 | |
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| 341 | int maskIndex = idxLoop[0]; |
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| 342 | int mulDim = 1; |
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| 343 | for (int k = 1; k < dim; ++k) |
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| 344 | { |
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| 345 | mulDim *= eachDimSize[k-1]; |
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| 346 | maskIndex += idxLoop[k]*mulDim; |
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| 347 | } |
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[623] | 348 | *(gridMask.dataFirst()+maskIndex) &= maskValue; |
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[567] | 349 | |
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| 350 | ++idxLoop[0]; |
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| 351 | ++idx; |
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| 352 | } |
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| 353 | |
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| 354 | } |
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| 355 | |
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[623] | 356 | /*! |
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| 357 | Modify the current mask of grid, the local index to be modified will take value false |
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| 358 | \param [in/out] gridMask current mask of grid |
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| 359 | \param [in] indexToModify local index to modify |
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| 360 | */ |
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| 361 | template<int N> |
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| 362 | void CGrid::modifyGridMask(CArray<bool,N>& gridMask, const CArray<int,1>& indexToModify) |
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| 363 | { |
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| 364 | bool valueToModify = false; |
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| 365 | int num = indexToModify.numElements(); |
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| 366 | for (int idx = 0; idx < num; ++idx) |
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| 367 | { |
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| 368 | *(gridMask.dataFirst()+indexToModify(idx)) = valueToModify; |
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| 369 | } |
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| 370 | } |
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[219] | 371 | ///-------------------------------------------------------------- |
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| 372 | |
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| 373 | // Declare/Define CGridGroup and CGridDefinition |
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| 374 | DECLARE_GROUP(CGrid); |
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| 375 | |
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| 376 | ///-------------------------------------------------------------- |
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| 377 | |
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[335] | 378 | } // namespace xios |
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[219] | 379 | |
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[591] | 380 | #endif // __XIOS_CGrid__ |
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