[219] | 1 | #ifndef __XMLIO_CGrid__ |
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| 2 | #define __XMLIO_CGrid__ |
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| 3 | |
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[335] | 4 | /// xios headers /// |
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[219] | 5 | #include "xmlioserver_spl.hpp" |
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| 6 | #include "group_factory.hpp" |
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| 7 | |
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| 8 | #include "declare_group.hpp" |
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| 9 | #include "domain.hpp" |
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| 10 | #include "axis.hpp" |
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[369] | 11 | #include "array_new.hpp" |
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| 12 | #include "attribute_array.hpp" |
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[551] | 13 | #include "distribution_client.hpp" |
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[552] | 14 | #include "distribution_server.hpp" |
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[553] | 15 | #include "server_distribution_description.hpp" |
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| 16 | #include "client_server_mapping.hpp" |
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[567] | 17 | #include "utils.hpp" |
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[219] | 18 | |
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[335] | 19 | namespace xios { |
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[509] | 20 | |
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[219] | 21 | /// ////////////////////// Déclarations ////////////////////// /// |
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| 22 | |
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| 23 | class CGridGroup; |
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| 24 | class CGridAttributes; |
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[540] | 25 | class CDomainGroup; |
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| 26 | class CAxisGroup; |
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[219] | 27 | class CGrid; |
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[551] | 28 | class CDistributionClient; |
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[552] | 29 | class CDistributionServer; |
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[553] | 30 | class CServerDistributionDescription; |
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| 31 | class CClientServerMapping; |
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[219] | 32 | |
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| 33 | ///-------------------------------------------------------------- |
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| 34 | |
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| 35 | // Declare/Define CGridAttribute |
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| 36 | BEGIN_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 37 | # include "grid_attribute.conf" |
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[586] | 38 | DECLARE_ATTRIBUTE(bool, scalar_grid) |
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[219] | 39 | END_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 40 | |
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| 41 | ///-------------------------------------------------------------- |
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| 42 | |
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| 43 | class CGrid |
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| 44 | : public CObjectTemplate<CGrid> |
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| 45 | , public CGridAttributes |
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| 46 | { |
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| 47 | /// typedef /// |
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| 48 | typedef CObjectTemplate<CGrid> SuperClass; |
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| 49 | typedef CGridAttributes SuperClassAttribute; |
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| 50 | |
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| 51 | public : |
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| 52 | |
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| 53 | typedef CGridAttributes RelAttributes; |
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| 54 | typedef CGridGroup RelGroup; |
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| 55 | |
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[300] | 56 | enum EEventId |
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| 57 | { |
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[540] | 58 | EVENT_ID_INDEX, EVENT_ID_ADD_DOMAIN, EVENT_ID_ADD_AXIS |
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[300] | 59 | } ; |
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[509] | 60 | |
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[219] | 61 | /// Constructeurs /// |
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| 62 | CGrid(void); |
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| 63 | explicit CGrid(const StdString & id); |
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| 64 | CGrid(const CGrid & grid); // Not implemented yet. |
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| 65 | CGrid(const CGrid * const grid); // Not implemented yet. |
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| 66 | |
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| 67 | /// Traitements /// |
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[509] | 68 | // void solveReference(void); |
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[219] | 69 | |
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[509] | 70 | void solveDomainAxisRef(bool areAttributesChecked); |
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| 71 | |
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| 72 | void checkMaskIndex(bool doCalculateIndex); |
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| 73 | |
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[369] | 74 | // virtual void toBinary (StdOStream & os) const; |
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| 75 | // virtual void fromBinary(StdIStream & is); |
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[219] | 76 | |
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| 77 | /// Tests /// |
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| 78 | bool hasAxis(void) const; |
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| 79 | |
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| 80 | public : |
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| 81 | |
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| 82 | /// Accesseurs /// |
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[369] | 83 | const std::deque< CArray<int, 1>* > & getStoreIndex(void) const; |
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| 84 | const std::deque< CArray<int, 1>* > & getOutIIndex(void) const; |
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| 85 | const std::deque< CArray<int, 1>* > & getOutJIndex(void) const; |
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| 86 | const std::deque< CArray<int, 1>* > & getOutLIndex(void) const; |
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[219] | 87 | |
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[347] | 88 | const CAxis* getRelAxis (void) const; |
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| 89 | const CDomain* getRelDomain(void) const; |
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[219] | 90 | |
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| 91 | StdSize getDimension(void) const; |
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[509] | 92 | |
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[351] | 93 | // StdSize getLocalSize(void) const; |
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| 94 | // StdSize getGlobalSize(void) const; |
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[286] | 95 | StdSize getDataSize(void) const; |
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[351] | 96 | // std::vector<StdSize> getLocalShape(void) const; |
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| 97 | // std::vector<StdSize> getGlobalShape(void) const; |
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[219] | 98 | |
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| 99 | /// Entrées-sorties de champs /// |
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[369] | 100 | template <int n> |
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| 101 | void inputField(const CArray<double,n>& field, CArray<double,1>& stored) const; |
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[509] | 102 | |
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[369] | 103 | void inputFieldServer(const std::deque< CArray<double, 1>* > storedClient, |
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| 104 | CArray<double, 1>& storedServer) const; |
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| 105 | |
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| 106 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,3>& field) ; |
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| 107 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,2>& field) ; |
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[509] | 108 | void outputField(int rank, const CArray<double,1>& stored, CArray<double,1>& field) ; |
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[551] | 109 | void outputField(int rank, const CArray<double,1>& stored, double* field); |
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[509] | 110 | |
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[540] | 111 | virtual void parse(xml::CXMLNode & node); |
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| 112 | |
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[219] | 113 | /// Destructeur /// |
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| 114 | virtual ~CGrid(void); |
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| 115 | |
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| 116 | public : |
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| 117 | |
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| 118 | /// Accesseurs statiques /// |
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| 119 | static StdString GetName(void); |
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| 120 | static StdString GetDefName(void); |
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[509] | 121 | |
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[219] | 122 | static ENodeType GetType(void); |
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| 123 | |
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| 124 | /// Instanciateurs Statiques /// |
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[347] | 125 | static CGrid* createGrid(CDomain* domain); |
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| 126 | static CGrid* createGrid(CDomain* domain, CAxis* axis); |
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[540] | 127 | static CGrid* createGrid(std::vector<CDomain*> domains, std::vector<CAxis*> axis); |
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[219] | 128 | |
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[300] | 129 | public : |
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[219] | 130 | |
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| 131 | /// Entrées-sorties de champs (interne) /// |
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[369] | 132 | void storeField_arr(const double * const data, CArray<double,1>& stored) const; |
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[219] | 133 | |
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| 134 | /// Traitements protégés /// |
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| 135 | void computeIndexServer(void); |
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| 136 | void computeIndex(void); |
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[586] | 137 | void computeIndexScalarGrid(); |
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[219] | 138 | |
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[509] | 139 | void solveDomainRef(bool checkAtt); |
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| 140 | void solveAxisRef(bool checkAtt); |
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[540] | 141 | void solveDomainAxisRefInheritance(bool apply = true); |
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[509] | 142 | |
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[540] | 143 | void sendAddDomain(const std::string& id=""); |
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| 144 | void sendAddAxis(const std::string& id=""); |
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| 145 | void sendAllDomains(); |
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| 146 | void sendAllAxis(); |
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| 147 | |
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| 148 | static void recvAddDomain(CEventServer& event) ; |
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| 149 | void recvAddDomain(CBufferIn& buffer) ; |
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| 150 | static void recvAddAxis(CEventServer& event) ; |
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| 151 | void recvAddAxis(CBufferIn& buffer) ; |
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| 152 | |
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[300] | 153 | static bool dispatchEvent(CEventServer& event) ; |
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[369] | 154 | void outputFieldToServer(CArray<double,1>& fieldIn, int rank, CArray<double,1>& fieldOut) ; |
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[300] | 155 | static void recvIndex(CEventServer& event) ; |
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| 156 | void recvIndex(int rank, CBufferIn& buffer) ; |
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| 157 | void sendIndex(void) ; |
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[586] | 158 | void sendIndexScalarGrid(); |
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[509] | 159 | |
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| 160 | void computeDomConServer(); |
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| 161 | std::map<int, int> getDomConServerSide(); |
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| 162 | std::map<int, StdSize> getConnectedServerDataSize(); |
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[540] | 163 | std::vector<StdString> getDomainList(); |
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| 164 | std::vector<StdString> getAxisList(); |
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| 165 | std::vector<CDomain*> getDomains(); |
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| 166 | std::vector<CAxis*> getAxis(); |
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[551] | 167 | std::vector<int> getAxisOrder(); |
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[567] | 168 | std::vector<int> getGlobalDimension(); |
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[540] | 169 | |
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[567] | 170 | bool doGridHaveDataToWrite(); |
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| 171 | bool doGridHaveDataDistributed(); |
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| 172 | size_t getWrittenDataSize() const; |
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| 173 | |
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| 174 | const CDistributionServer* getDistributionServer() const; |
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| 175 | |
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[219] | 176 | public: |
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| 177 | |
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| 178 | /// Propriétés privées /// |
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| 179 | bool isChecked; |
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[509] | 180 | bool isDomainAxisChecked; |
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[551] | 181 | bool isIndexSent; |
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[219] | 182 | |
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[369] | 183 | std::deque< CArray<int, 1>* > storeIndex ; |
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| 184 | CArray<int, 1> storeIndex_client ; |
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[509] | 185 | |
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[567] | 186 | |
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[369] | 187 | map<int, CArray<int, 1>* > storeIndex_toSrv ; |
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[300] | 188 | map<int,int> nbSenders ; |
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[509] | 189 | |
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[551] | 190 | map<int, CArray<size_t, 1>* > outIndexFromClient; |
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[415] | 191 | void checkMask(void) ; |
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[509] | 192 | |
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[540] | 193 | private: |
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[567] | 194 | template<int N> |
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| 195 | void checkGridMask(CArray<bool,N>& gridMask, |
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| 196 | const std::vector<CArray<bool,2>* >& domainMasks, |
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| 197 | const std::vector<CArray<bool,1>* >& axisMasks, |
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| 198 | const CArray<bool,1>& axisDomainOrder); |
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[540] | 199 | void setVirtualDomainGroup(CDomainGroup* newVDomainGroup); |
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| 200 | void setVirtualDomainGroup(); |
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| 201 | void setVirtualAxisGroup(CAxisGroup* newVAxisGroup); |
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| 202 | void setVirtualAxisGroup(); |
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[567] | 203 | |
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[540] | 204 | void setAxisList(const std::vector<CAxis*> axis = std::vector<CAxis*>()); |
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| 205 | void setDomainList(const std::vector<CDomain*> domains = std::vector<CDomain*>()); |
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| 206 | |
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[567] | 207 | void computeGridGlobalDimension(const std::vector<CDomain*>& domains, |
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| 208 | const std::vector<CAxis*>& axis, |
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| 209 | const CArray<bool,1>& axisDomainOrder); |
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| 210 | |
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[540] | 211 | CDomain* addDomain(const std::string& id); |
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| 212 | CAxis* addAxis(const std::string& id); |
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| 213 | |
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| 214 | CAxisGroup* getVirtualAxisGroup() const; |
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| 215 | CDomainGroup* getVirtualDomainGroup() const; |
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[567] | 216 | std::vector<int> globalDim_; |
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[540] | 217 | private: |
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| 218 | CDomainGroup* vDomainGroup_; |
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| 219 | CAxisGroup* vAxisGroup_; |
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| 220 | std::vector<std::string> axisList_, domList_; |
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| 221 | bool isAxisListSet, isDomListSet; |
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[567] | 222 | |
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[551] | 223 | CDistributionClient* clientDistribution_; |
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[552] | 224 | CDistributionServer* serverDistribution_; |
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[553] | 225 | CServerDistributionDescription* serverDistributionDescription_; |
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[568] | 226 | CClientServerMapping* clientServerMap_; |
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[567] | 227 | size_t writtenDataSize_; |
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[584] | 228 | std::map<int,size_t> connectedDataSize_; |
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| 229 | std::vector<int> connectedServerRank_; |
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[586] | 230 | bool isDataDistributed_; |
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[219] | 231 | }; // class CGrid |
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| 232 | |
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| 233 | ///-------------------------------------------------------------- |
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| 234 | |
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[369] | 235 | template <int n> |
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[567] | 236 | void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const |
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[219] | 237 | { |
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[369] | 238 | if (this->getDataSize() != field.numElements()) |
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| 239 | ERROR("void CGrid::inputField(const CArray<double,n>& field, CArray<double,1>& stored) const", |
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[421] | 240 | << "[ Awaiting size of the data = " << this->getDataSize() << ", " |
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| 241 | << "Received data size = " << field.numElements() << " ] " |
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| 242 | << "The array of data has not the good size !") |
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[369] | 243 | this->storeField_arr(field.dataFirst(), stored) ; |
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[219] | 244 | } |
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| 245 | |
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[567] | 246 | template<int N> |
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| 247 | void CGrid::checkGridMask(CArray<bool,N>& gridMask, |
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| 248 | const std::vector<CArray<bool,2>* >& domainMasks, |
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| 249 | const std::vector<CArray<bool,1>* >& axisMasks, |
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| 250 | const CArray<bool,1>& axisDomainOrder) |
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| 251 | { |
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| 252 | int idx = 0; |
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| 253 | int numElement = axisDomainOrder.numElements(); |
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| 254 | int dim = domainMasks.size()*2 + axisMasks.size(); |
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| 255 | |
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| 256 | std::vector<int> idxLoop(dim,0), indexMap(numElement), eachDimSize(dim); |
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| 257 | std::vector<int> currentIndex(dim); |
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| 258 | int idxDomain = 0, idxAxis = 0; |
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| 259 | for (int i = 0; i < numElement; ++i) |
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| 260 | { |
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| 261 | indexMap[i] = idx; |
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| 262 | if (true == axisDomainOrder(i)) { |
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| 263 | eachDimSize[indexMap[i]] = domainMasks[idxDomain]->extent(0); |
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| 264 | eachDimSize[indexMap[i]+1] = domainMasks[idxDomain]->extent(1); |
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| 265 | idx += 2; ++idxDomain; |
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| 266 | } |
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| 267 | else { |
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| 268 | eachDimSize[indexMap[i]] = axisMasks[idxAxis]->numElements(); |
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| 269 | ++idx; ++idxAxis; |
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| 270 | } |
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| 271 | } |
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| 272 | |
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| 273 | if (!gridMask.isEmpty()) |
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| 274 | { |
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| 275 | for (int i = 0; i < dim; ++i) |
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| 276 | { |
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| 277 | if (gridMask.extent(i) != eachDimSize[i]) |
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| 278 | ERROR("CGrid::checkMask(void)", |
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| 279 | <<"The mask has one dimension whose size is different from the one of the local grid"<<endl |
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| 280 | <<"Local size is "<< i << " " << eachDimSize[i]<<endl |
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| 281 | <<"Mask dimension size is "<<gridMask.extent(i)); |
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| 282 | } |
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| 283 | } |
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| 284 | else { |
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| 285 | CArrayBoolTraits<CArray<bool,N> >::resizeArray(gridMask,eachDimSize); |
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| 286 | gridMask = true; |
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| 287 | } |
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| 288 | |
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| 289 | int ssize = gridMask.numElements(); |
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| 290 | idx = 0; |
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| 291 | while (idx < ssize) |
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| 292 | { |
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| 293 | for (int i = 0; i < dim-1; ++i) |
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| 294 | { |
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| 295 | if (idxLoop[i] == eachDimSize[i]) |
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| 296 | { |
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| 297 | idxLoop[i] = 0; |
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| 298 | ++idxLoop[i+1]; |
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| 299 | } |
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| 300 | } |
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| 301 | |
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| 302 | // Find out outer index |
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| 303 | idxDomain = idxAxis = 0; |
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| 304 | bool maskValue = true; |
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| 305 | for (int i = 0; i < numElement; ++i) |
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| 306 | { |
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| 307 | if (axisDomainOrder(i)) |
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| 308 | { |
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| 309 | maskValue = maskValue && (*domainMasks[idxDomain])(idxLoop[indexMap[i]], |
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| 310 | idxLoop[indexMap[i]+1]); |
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| 311 | ++idxDomain; |
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| 312 | } |
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| 313 | else |
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| 314 | { |
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| 315 | maskValue = maskValue && (*axisMasks[idxAxis])(idxLoop[indexMap[i]]); |
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| 316 | ++idxAxis; |
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| 317 | } |
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| 318 | } |
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| 319 | |
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| 320 | int maskIndex = idxLoop[0]; |
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| 321 | int mulDim = 1; |
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| 322 | for (int k = 1; k < dim; ++k) |
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| 323 | { |
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| 324 | mulDim *= eachDimSize[k-1]; |
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| 325 | maskIndex += idxLoop[k]*mulDim; |
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| 326 | } |
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| 327 | *(gridMask.dataFirst()+maskIndex) = maskValue; |
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| 328 | |
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| 329 | ++idxLoop[0]; |
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| 330 | ++idx; |
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| 331 | } |
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| 332 | |
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| 333 | } |
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| 334 | |
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[219] | 335 | ///-------------------------------------------------------------- |
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| 336 | |
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| 337 | // Declare/Define CGridGroup and CGridDefinition |
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| 338 | DECLARE_GROUP(CGrid); |
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| 339 | |
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| 340 | ///-------------------------------------------------------------- |
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| 341 | |
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[335] | 342 | } // namespace xios |
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[219] | 343 | |
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| 344 | #endif // __XMLIO_CGrid__ |
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