1 | #include "domain.hpp" |
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2 | |
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3 | #include "attribute_template.hpp" |
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4 | #include "object_template.hpp" |
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5 | #include "group_template.hpp" |
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6 | |
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7 | #include "xios_spl.hpp" |
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8 | #include "event_client.hpp" |
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9 | #include "event_server.hpp" |
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10 | #include "buffer_in.hpp" |
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11 | #include "message.hpp" |
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12 | #include "type.hpp" |
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13 | #include "context.hpp" |
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14 | #include "context_client.hpp" |
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15 | #include "context_server.hpp" |
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16 | #include "array_new.hpp" |
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17 | #include "distribution_client.hpp" |
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18 | #include "server_distribution_description.hpp" |
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19 | #include "client_server_mapping_distributed.hpp" |
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20 | |
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21 | #include <algorithm> |
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22 | |
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23 | namespace xios { |
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24 | |
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25 | /// ////////////////////// Définitions ////////////////////// /// |
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26 | |
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27 | CDomain::CDomain(void) |
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28 | : CObjectTemplate<CDomain>(), CDomainAttributes() |
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29 | , isChecked(false), relFiles(), isClientChecked(false), nbSenders(), indSrv_(), connectedServerRank_() |
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30 | , hasBounds(false), hasArea(false), isCompressible_(false), isUnstructed_(false) |
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31 | , isClientAfterTransformationChecked(false), hasLonLat(false) |
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32 | , isRedistributed_(false), hasPole(false) |
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33 | , lonvalue(), latvalue(), bounds_lonvalue(), bounds_latvalue() |
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34 | , globalLocalIndexMap_(), computedWrittenIndex_(false) |
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35 | , clients(), hasLatInReadFile_(false), hasBoundsLatInReadFile_(false) |
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36 | , hasLonInReadFile_(false), hasBoundsLonInReadFile_(false) |
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37 | { |
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38 | } |
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39 | |
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40 | CDomain::CDomain(const StdString & id) |
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41 | : CObjectTemplate<CDomain>(id), CDomainAttributes() |
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42 | , isChecked(false), relFiles(), isClientChecked(false), nbSenders(), indSrv_(), connectedServerRank_() |
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43 | , hasBounds(false), hasArea(false), isCompressible_(false), isUnstructed_(false) |
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44 | , isClientAfterTransformationChecked(false), hasLonLat(false) |
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45 | , isRedistributed_(false), hasPole(false) |
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46 | , lonvalue(), latvalue(), bounds_lonvalue(), bounds_latvalue() |
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47 | , globalLocalIndexMap_(), computedWrittenIndex_(false) |
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48 | , clients(), hasLatInReadFile_(false), hasBoundsLatInReadFile_(false) |
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49 | , hasLonInReadFile_(false), hasBoundsLonInReadFile_(false) |
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50 | { |
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51 | } |
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52 | |
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53 | CDomain::~CDomain(void) |
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54 | { |
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55 | } |
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56 | |
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57 | ///--------------------------------------------------------------- |
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58 | |
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59 | void CDomain::assignMesh(const StdString meshName, const int nvertex) |
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60 | TRY |
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61 | { |
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62 | mesh = CMesh::getMesh(meshName, nvertex); |
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63 | } |
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64 | CATCH_DUMP_ATTR |
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65 | |
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66 | CDomain* CDomain::createDomain() |
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67 | TRY |
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68 | { |
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69 | CDomain* domain = CDomainGroup::get("domain_definition")->createChild(); |
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70 | return domain; |
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71 | } |
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72 | CATCH |
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73 | |
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74 | std::map<StdString, ETranformationType> CDomain::transformationMapList_ = std::map<StdString, ETranformationType>(); |
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75 | bool CDomain::_dummyTransformationMapList = CDomain::initializeTransformationMap(CDomain::transformationMapList_); |
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76 | |
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77 | bool CDomain::initializeTransformationMap(std::map<StdString, ETranformationType>& m) |
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78 | TRY |
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79 | { |
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80 | m["zoom_domain"] = TRANS_ZOOM_DOMAIN; |
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81 | m["interpolate_domain"] = TRANS_INTERPOLATE_DOMAIN; |
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82 | m["generate_rectilinear_domain"] = TRANS_GENERATE_RECTILINEAR_DOMAIN; |
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83 | m["compute_connectivity_domain"] = TRANS_COMPUTE_CONNECTIVITY_DOMAIN; |
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84 | m["expand_domain"] = TRANS_EXPAND_DOMAIN; |
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85 | m["reorder_domain"] = TRANS_REORDER_DOMAIN; |
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86 | m["extract_domain"] = TRANS_EXTRACT_DOMAIN; |
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87 | } |
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88 | CATCH |
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89 | |
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90 | const std::set<StdString> & CDomain::getRelFiles(void) const |
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91 | TRY |
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92 | { |
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93 | return (this->relFiles); |
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94 | } |
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95 | CATCH |
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96 | |
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97 | /*! |
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98 | Returns the number of indexes written by each server. |
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99 | \return the number of indexes written by each server |
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100 | */ |
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101 | int CDomain::getNumberWrittenIndexes(MPI_Comm writtenCom) |
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102 | TRY |
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103 | { |
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104 | int writtenSize; |
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105 | MPI_Comm_size(writtenCom, &writtenSize); |
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106 | return numberWrittenIndexes_[writtenSize]; |
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107 | } |
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108 | CATCH_DUMP_ATTR |
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109 | |
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110 | /*! |
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111 | Returns the total number of indexes written by the servers. |
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112 | \return the total number of indexes written by the servers |
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113 | */ |
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114 | int CDomain::getTotalNumberWrittenIndexes(MPI_Comm writtenCom) |
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115 | TRY |
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116 | { |
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117 | int writtenSize; |
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118 | MPI_Comm_size(writtenCom, &writtenSize); |
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119 | return totalNumberWrittenIndexes_[writtenSize]; |
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120 | } |
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121 | CATCH_DUMP_ATTR |
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122 | |
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123 | /*! |
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124 | Returns the offset of indexes written by each server. |
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125 | \return the offset of indexes written by each server |
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126 | */ |
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127 | int CDomain::getOffsetWrittenIndexes(MPI_Comm writtenCom) |
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128 | TRY |
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129 | { |
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130 | int writtenSize; |
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131 | MPI_Comm_size(writtenCom, &writtenSize); |
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132 | return offsetWrittenIndexes_[writtenSize]; |
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133 | } |
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134 | CATCH_DUMP_ATTR |
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135 | |
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136 | CArray<int, 1>& CDomain::getCompressedIndexToWriteOnServer(MPI_Comm writtenCom) |
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137 | TRY |
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138 | { |
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139 | int writtenSize; |
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140 | MPI_Comm_size(writtenCom, &writtenSize); |
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141 | return compressedIndexToWriteOnServer[writtenSize]; |
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142 | } |
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143 | CATCH_DUMP_ATTR |
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144 | |
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145 | //---------------------------------------------------------------- |
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146 | |
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147 | /*! |
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148 | * Compute the minimum buffer size required to send the attributes to the server(s). |
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149 | * |
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150 | * \return A map associating the server rank with its minimum buffer size. |
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151 | */ |
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152 | std::map<int, StdSize> CDomain::getAttributesBufferSize(CContextClient* client, bool bufferForWriting /*= false*/) |
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153 | TRY |
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154 | { |
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155 | |
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156 | std::map<int, StdSize> attributesSizes = getMinimumBufferSizeForAttributes(client); |
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157 | |
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158 | if (client->isServerLeader()) |
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159 | { |
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160 | // size estimation for sendDistributionAttribut |
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161 | size_t size = 11 * sizeof(size_t); |
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162 | |
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163 | const std::list<int>& ranks = client->getRanksServerLeader(); |
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164 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
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165 | { |
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166 | if (size > attributesSizes[*itRank]) |
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167 | attributesSizes[*itRank] = size; |
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168 | } |
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169 | } |
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170 | |
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171 | std::unordered_map<int, vector<size_t> >::const_iterator itIndexEnd = indSrv_[client->serverSize].end(); |
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172 | // std::map<int, std::vector<int> >::const_iterator itWrittenIndexEnd = indWrittenSrv_.end(); |
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173 | for (size_t k = 0; k < connectedServerRank_[client->serverSize].size(); ++k) |
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174 | { |
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175 | int rank = connectedServerRank_[client->serverSize][k]; |
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176 | std::unordered_map<int, std::vector<size_t> >::const_iterator it = indSrv_[client->serverSize].find(rank); |
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177 | size_t idxCount = (it != itIndexEnd) ? it->second.size() : 0; |
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178 | |
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179 | // size estimation for sendIndex (and sendArea which is always smaller or equal) |
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180 | size_t sizeIndexEvent = 2 * sizeof(size_t) + 2 * CArray<int,1>::size(idxCount); |
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181 | |
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182 | // size estimation for sendLonLat |
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183 | size_t sizeLonLatEvent = CArray<double,1>::size(idxCount); |
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184 | if (hasBounds) |
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185 | sizeLonLatEvent += CArray<double,2>::size(nvertex * idxCount); |
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186 | |
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187 | size_t size = CEventClient::headerSize + getId().size() + sizeof(size_t) + std::max(sizeIndexEvent, sizeLonLatEvent); |
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188 | if (size > attributesSizes[rank]) |
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189 | attributesSizes[rank] = size; |
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190 | } |
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191 | |
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192 | return attributesSizes; |
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193 | } |
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194 | CATCH_DUMP_ATTR |
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195 | |
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196 | //---------------------------------------------------------------- |
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197 | |
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198 | bool CDomain::isEmpty(void) const |
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199 | TRY |
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200 | { |
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201 | return ((this->i_index.isEmpty()) || (0 == this->i_index.numElements())); |
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202 | } |
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203 | CATCH |
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204 | |
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205 | //---------------------------------------------------------------- |
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206 | |
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207 | bool CDomain::IsWritten(const StdString & filename) const |
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208 | TRY |
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209 | { |
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210 | return (this->relFiles.find(filename) != this->relFiles.end()); |
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211 | } |
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212 | CATCH |
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213 | |
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214 | bool CDomain::isWrittenCompressed(const StdString& filename) const |
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215 | TRY |
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216 | { |
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217 | return (this->relFilesCompressed.find(filename) != this->relFilesCompressed.end()); |
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218 | } |
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219 | CATCH |
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220 | |
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221 | //---------------------------------------------------------------- |
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222 | |
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223 | bool CDomain::isDistributed(void) const |
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224 | TRY |
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225 | { |
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226 | bool distributed = !((!ni.isEmpty() && (ni == ni_glo) && !nj.isEmpty() && (nj == nj_glo)) || |
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227 | (!i_index.isEmpty() && i_index.numElements() == ni_glo*nj_glo)); |
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228 | bool distributed_glo ; |
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229 | distributed |= (1 == CContext::getCurrent()->client->clientSize); |
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230 | |
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231 | return distributed; |
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232 | } |
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233 | CATCH |
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234 | |
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235 | //---------------------------------------------------------------- |
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236 | |
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237 | /*! |
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238 | * Test whether the data defined on the domain can be outputted in a compressed way. |
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239 | * |
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240 | * \return true if and only if a mask was defined for this domain |
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241 | */ |
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242 | bool CDomain::isCompressible(void) const |
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243 | TRY |
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244 | { |
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245 | return isCompressible_; |
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246 | } |
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247 | CATCH |
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248 | |
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249 | void CDomain::addRelFile(const StdString & filename) |
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250 | TRY |
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251 | { |
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252 | this->relFiles.insert(filename); |
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253 | } |
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254 | CATCH_DUMP_ATTR |
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255 | |
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256 | void CDomain::addRelFileCompressed(const StdString& filename) |
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257 | TRY |
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258 | { |
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259 | this->relFilesCompressed.insert(filename); |
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260 | } |
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261 | CATCH_DUMP_ATTR |
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262 | |
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263 | StdString CDomain::GetName(void) { return (StdString("domain")); } |
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264 | StdString CDomain::GetDefName(void){ return (CDomain::GetName()); } |
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265 | ENodeType CDomain::GetType(void) { return (eDomain); } |
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266 | |
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267 | //---------------------------------------------------------------- |
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268 | |
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269 | /*! |
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270 | Verify if all distribution information of a domain are available |
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271 | This checking verifies the definition of distribution attributes (ni, nj, ibegin, jbegin) |
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272 | */ |
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273 | bool CDomain::distributionAttributesHaveValue() const |
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274 | TRY |
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275 | { |
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276 | bool hasValues = true; |
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277 | |
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278 | if (ni.isEmpty() && ibegin.isEmpty() && i_index.isEmpty()) |
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279 | { |
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280 | hasValues = false; |
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281 | return hasValues; |
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282 | } |
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283 | |
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284 | return hasValues; |
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285 | } |
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286 | CATCH |
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287 | |
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288 | /*! |
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289 | Redistribute RECTILINEAR or CURVILINEAR domain with a number of local domains. |
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290 | All attributes ni,nj,ibegin,jbegin (if defined) will be rewritten |
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291 | The optional attributes lonvalue, latvalue will be added. Because this function only serves (for now) |
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292 | for interpolation from unstructured domain to rectilinear one, range of latvalue is 0-360 and lonvalue is -90 - +90 |
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293 | \param [in] nbLocalDomain number of local domain on the domain destination |
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294 | */ |
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295 | void CDomain::redistribute(int nbLocalDomain) |
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296 | TRY |
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297 | { |
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298 | if (this->isRedistributed_) return; |
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299 | |
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300 | this->isRedistributed_ = true; |
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301 | CContext* context = CContext::getCurrent(); |
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302 | // For now the assumption is that secondary server pools consist of the same number of procs. |
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303 | // CHANGE the line below if the assumption changes. |
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304 | CContextClient* client = (0 != context->clientPrimServer.size()) ? context->clientPrimServer[0] : context->client; |
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305 | int rankClient = client->clientRank; |
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306 | int rankOnDomain = rankClient%nbLocalDomain; |
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307 | |
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308 | if (ni_glo.isEmpty() || ni_glo <= 0 ) |
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309 | { |
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310 | ERROR("CDomain::redistribute(int nbLocalDomain)", |
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311 | << "[ Id = " << this->getId() << " ] " |
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312 | << "The global domain is badly defined," |
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313 | << " check the \'ni_glo\' value !") |
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314 | } |
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315 | |
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316 | if (nj_glo.isEmpty() || nj_glo <= 0 ) |
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317 | { |
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318 | ERROR("CDomain::redistribute(int nbLocalDomain)", |
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319 | << "[ Id = " << this->getId() << " ] " |
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320 | << "The global domain is badly defined," |
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321 | << " check the \'nj_glo\' value !") |
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322 | } |
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323 | |
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324 | if ((type_attr::rectilinear == type) || (type_attr::curvilinear == type)) |
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325 | { |
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326 | int globalDomainSize = ni_glo * nj_glo; |
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327 | if (globalDomainSize <= nbLocalDomain) |
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328 | { |
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329 | for (int idx = 0; idx < nbLocalDomain; ++idx) |
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330 | { |
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331 | if (rankOnDomain < globalDomainSize) |
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332 | { |
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333 | int iIdx = rankOnDomain % ni_glo; |
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334 | int jIdx = rankOnDomain / ni_glo; |
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335 | ibegin.setValue(iIdx); jbegin.setValue(jIdx); |
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336 | ni.setValue(1); nj.setValue(1); |
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337 | } |
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338 | else |
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339 | { |
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340 | ibegin.setValue(0); jbegin.setValue(0); |
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341 | ni.setValue(0); nj.setValue(0); |
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342 | } |
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343 | } |
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344 | } |
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345 | else |
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346 | { |
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347 | float njGlo = nj_glo.getValue(); |
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348 | float niGlo = ni_glo.getValue(); |
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349 | int nbProcOnX, nbProcOnY, range; |
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350 | |
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351 | // Compute (approximately) number of segment on x and y axis |
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352 | float yOverXRatio = njGlo/niGlo; |
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353 | |
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354 | nbProcOnX = std::ceil(std::sqrt(nbLocalDomain/yOverXRatio)); |
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355 | nbProcOnY = std::ceil(((float)nbLocalDomain)/nbProcOnX); |
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356 | |
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357 | // Simple distribution: Sweep from top to bottom, left to right |
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358 | // Calculate local begin on x |
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359 | std::vector<int> ibeginVec(nbProcOnX,0), jbeginVec(nbProcOnY,0); |
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360 | std::vector<int> niVec(nbProcOnX), njVec(nbProcOnY); |
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361 | for (int i = 1; i < nbProcOnX; ++i) |
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362 | { |
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363 | range = ni_glo / nbProcOnX; |
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364 | if (i < (ni_glo%nbProcOnX)) ++range; |
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365 | niVec[i-1] = range; |
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366 | ibeginVec[i] = ibeginVec[i-1] + niVec[i-1]; |
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367 | } |
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368 | niVec[nbProcOnX-1] = ni_glo - ibeginVec[nbProcOnX-1]; |
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369 | |
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370 | // Calculate local begin on y |
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371 | for (int j = 1; j < nbProcOnY; ++j) |
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372 | { |
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373 | range = nj_glo / nbProcOnY; |
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374 | if (j < (nj_glo%nbProcOnY)) ++range; |
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375 | njVec[j-1] = range; |
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376 | jbeginVec[j] = jbeginVec[j-1] + njVec[j-1]; |
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377 | } |
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378 | njVec[nbProcOnY-1] = nj_glo - jbeginVec[nbProcOnY-1]; |
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379 | |
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380 | // Now assign value to ni, ibegin, nj, jbegin |
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381 | int iIdx = rankOnDomain % nbProcOnX; |
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382 | int jIdx = rankOnDomain / nbProcOnX; |
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383 | |
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384 | if (rankOnDomain != (nbLocalDomain-1)) |
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385 | { |
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386 | ibegin.setValue(ibeginVec[iIdx]); |
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387 | jbegin.setValue(jbeginVec[jIdx]); |
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388 | nj.setValue(njVec[jIdx]); |
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389 | ni.setValue(niVec[iIdx]); |
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390 | } |
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391 | else // just merge all the remaining rectangle into the last one |
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392 | { |
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393 | ibegin.setValue(ibeginVec[iIdx]); |
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394 | jbegin.setValue(jbeginVec[jIdx]); |
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395 | nj.setValue(njVec[jIdx]); |
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396 | ni.setValue(ni_glo - ibeginVec[iIdx]); |
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397 | } |
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398 | } |
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399 | } |
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400 | else // unstructured domain |
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401 | { |
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402 | if (this->i_index.isEmpty()) |
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403 | { |
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404 | int globalDomainSize = ni_glo * nj_glo; |
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405 | if (globalDomainSize <= nbLocalDomain) |
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406 | { |
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407 | for (int idx = 0; idx < nbLocalDomain; ++idx) |
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408 | { |
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409 | if (rankOnDomain < globalDomainSize) |
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410 | { |
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411 | int iIdx = rankOnDomain % ni_glo; |
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412 | int jIdx = rankOnDomain / ni_glo; |
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413 | ibegin.setValue(iIdx); jbegin.setValue(jIdx); |
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414 | ni.setValue(1); nj.setValue(1); |
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415 | } |
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416 | else |
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417 | { |
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418 | ibegin.setValue(0); jbegin.setValue(0); |
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419 | ni.setValue(0); nj.setValue(0); |
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420 | } |
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421 | } |
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422 | } |
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423 | else |
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424 | { |
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425 | float njGlo = nj_glo.getValue(); |
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426 | float niGlo = ni_glo.getValue(); |
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427 | std::vector<int> ibeginVec(nbLocalDomain,0); |
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428 | std::vector<int> niVec(nbLocalDomain); |
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429 | for (int i = 1; i < nbLocalDomain; ++i) |
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430 | { |
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431 | int range = ni_glo / nbLocalDomain; |
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432 | if (i < (ni_glo%nbLocalDomain)) ++range; |
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433 | niVec[i-1] = range; |
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434 | ibeginVec[i] = ibeginVec[i-1] + niVec[i-1]; |
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435 | } |
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436 | niVec[nbLocalDomain-1] = ni_glo - ibeginVec[nbLocalDomain-1]; |
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437 | |
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438 | int iIdx = rankOnDomain % nbLocalDomain; |
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439 | ibegin.setValue(ibeginVec[iIdx]); |
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440 | jbegin.setValue(0); |
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441 | ni.setValue(niVec[iIdx]); |
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442 | nj.setValue(1); |
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443 | } |
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444 | |
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445 | i_index.resize(ni); |
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446 | for(int idx = 0; idx < ni; ++idx) i_index(idx)=ibegin+idx; |
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447 | } |
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448 | else |
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449 | { |
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450 | ibegin.setValue(this->i_index(0)); |
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451 | jbegin.setValue(0); |
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452 | ni.setValue(this->i_index.numElements()); |
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453 | nj.setValue(1); |
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454 | } |
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455 | } |
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456 | |
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457 | checkDomain(); |
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458 | } |
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459 | CATCH_DUMP_ATTR |
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460 | |
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461 | /*! |
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462 | Fill in longitude and latitude whose values are read from file |
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463 | */ |
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464 | void CDomain::fillInLonLat() |
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465 | TRY |
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466 | { |
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467 | switch (type) |
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468 | { |
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469 | case type_attr::rectilinear: |
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470 | fillInRectilinearLonLat(); |
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471 | break; |
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472 | case type_attr::curvilinear: |
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473 | fillInCurvilinearLonLat(); |
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474 | break; |
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475 | case type_attr::unstructured: |
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476 | fillInUnstructuredLonLat(); |
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477 | break; |
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478 | |
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479 | default: |
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480 | break; |
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481 | } |
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482 | completeLonLatClient() ; |
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483 | } |
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484 | CATCH_DUMP_ATTR |
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485 | |
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486 | /*! |
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487 | Fill in the values for lonvalue_1d and latvalue_1d of rectilinear domain |
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488 | Range of longitude value from 0 - 360 |
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489 | Range of latitude value from -90 - +90 |
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490 | */ |
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491 | void CDomain::fillInRectilinearLonLat() |
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492 | TRY |
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493 | { |
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494 | if (!lonvalue_rectilinear_read_from_file.isEmpty() && lonvalue_2d.isEmpty() && lonvalue_1d.isEmpty()) |
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495 | { |
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496 | lonvalue_1d.resize(ni); |
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497 | for (int idx = 0; idx < ni; ++idx) |
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498 | lonvalue_1d(idx) = lonvalue_rectilinear_read_from_file(idx+ibegin); |
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499 | lon_start.setValue(lonvalue_rectilinear_read_from_file(0)); |
---|
500 | lon_end.setValue(lonvalue_rectilinear_read_from_file(ni_glo-1)); |
---|
501 | } |
---|
502 | else if (!hasLonInReadFile_) |
---|
503 | { |
---|
504 | if (!lonvalue_2d.isEmpty()) lonvalue_2d.free(); |
---|
505 | lonvalue_1d.resize(ni); |
---|
506 | double lonRange = lon_end - lon_start; |
---|
507 | double lonStep = (1 == ni_glo.getValue()) ? lonRange : lonRange/double(ni_glo.getValue()-1); |
---|
508 | |
---|
509 | // Assign lon value |
---|
510 | for (int i = 0; i < ni; ++i) |
---|
511 | { |
---|
512 | if (0 == (ibegin + i)) |
---|
513 | { |
---|
514 | lonvalue_1d(i) = lon_start; |
---|
515 | } |
---|
516 | else if (ni_glo == (ibegin + i + 1)) |
---|
517 | { |
---|
518 | lonvalue_1d(i) = lon_end; |
---|
519 | } |
---|
520 | else |
---|
521 | { |
---|
522 | lonvalue_1d(i) = (ibegin + i) * lonStep + lon_start; |
---|
523 | } |
---|
524 | } |
---|
525 | } |
---|
526 | |
---|
527 | |
---|
528 | if (!latvalue_rectilinear_read_from_file.isEmpty() && latvalue_2d.isEmpty() && latvalue_1d.isEmpty()) |
---|
529 | { |
---|
530 | latvalue_1d.resize(nj); |
---|
531 | for (int idx = 0; idx < nj; ++idx) |
---|
532 | latvalue_1d(idx) = latvalue_rectilinear_read_from_file(idx+jbegin); |
---|
533 | lat_start.setValue(latvalue_rectilinear_read_from_file(0)); |
---|
534 | lat_end.setValue(latvalue_rectilinear_read_from_file(nj_glo-1)); |
---|
535 | } |
---|
536 | else if (!hasLatInReadFile_) |
---|
537 | { |
---|
538 | if (!latvalue_2d.isEmpty()) latvalue_1d.free(); |
---|
539 | latvalue_1d.resize(nj); |
---|
540 | |
---|
541 | double latRange = lat_end - lat_start; |
---|
542 | double latStep = (1 == nj_glo.getValue()) ? latRange : latRange/double(nj_glo.getValue()-1); |
---|
543 | |
---|
544 | for (int j = 0; j < nj; ++j) |
---|
545 | { |
---|
546 | if (0 == (jbegin + j)) |
---|
547 | { |
---|
548 | latvalue_1d(j) = lat_start; |
---|
549 | } |
---|
550 | else if (nj_glo == (jbegin + j + 1)) |
---|
551 | { |
---|
552 | latvalue_1d(j) = lat_end; |
---|
553 | } |
---|
554 | else |
---|
555 | { |
---|
556 | latvalue_1d(j) = (jbegin + j) * latStep + lat_start; |
---|
557 | } |
---|
558 | } |
---|
559 | } |
---|
560 | } |
---|
561 | CATCH_DUMP_ATTR |
---|
562 | |
---|
563 | /* |
---|
564 | Fill in 2D longitude and latitude of curvilinear domain read from a file. |
---|
565 | If there are already longitude and latitude defined by model. We just ignore read value. |
---|
566 | */ |
---|
567 | void CDomain::fillInCurvilinearLonLat() |
---|
568 | TRY |
---|
569 | { |
---|
570 | if (!lonvalue_curvilinear_read_from_file.isEmpty() && lonvalue_2d.isEmpty() && lonvalue_1d.isEmpty()) |
---|
571 | { |
---|
572 | lonvalue_2d.resize(ni,nj); |
---|
573 | for (int jdx = 0; jdx < nj; ++jdx) |
---|
574 | for (int idx = 0; idx < ni; ++idx) |
---|
575 | lonvalue_2d(idx,jdx) = lonvalue_curvilinear_read_from_file(idx, jdx); |
---|
576 | |
---|
577 | lonvalue_curvilinear_read_from_file.free(); |
---|
578 | } |
---|
579 | |
---|
580 | if (!latvalue_curvilinear_read_from_file.isEmpty() && latvalue_2d.isEmpty() && latvalue_1d.isEmpty()) |
---|
581 | { |
---|
582 | latvalue_2d.resize(ni,nj); |
---|
583 | for (int jdx = 0; jdx < nj; ++jdx) |
---|
584 | for (int idx = 0; idx < ni; ++idx) |
---|
585 | latvalue_2d(idx,jdx) = latvalue_curvilinear_read_from_file(idx, jdx); |
---|
586 | |
---|
587 | latvalue_curvilinear_read_from_file.free(); |
---|
588 | } |
---|
589 | |
---|
590 | if (!bounds_lonvalue_curvilinear_read_from_file.isEmpty() && bounds_lon_2d.isEmpty() && bounds_lon_1d.isEmpty()) |
---|
591 | { |
---|
592 | bounds_lon_2d.resize(nvertex,ni,nj); |
---|
593 | for (int jdx = 0; jdx < nj; ++jdx) |
---|
594 | for (int idx = 0; idx < ni; ++idx) |
---|
595 | for (int ndx = 0; ndx < nvertex; ++ndx) |
---|
596 | bounds_lon_2d(ndx,idx,jdx) = bounds_lonvalue_curvilinear_read_from_file(ndx,idx, jdx); |
---|
597 | |
---|
598 | bounds_lonvalue_curvilinear_read_from_file.free(); |
---|
599 | } |
---|
600 | |
---|
601 | if (!bounds_latvalue_curvilinear_read_from_file.isEmpty() && bounds_lat_2d.isEmpty() && bounds_lat_1d.isEmpty()) |
---|
602 | { |
---|
603 | bounds_lat_2d.resize(nvertex,ni,nj); |
---|
604 | for (int jdx = 0; jdx < nj; ++jdx) |
---|
605 | for (int idx = 0; idx < ni; ++idx) |
---|
606 | for (int ndx = 0; ndx < nvertex; ++ndx) |
---|
607 | bounds_lat_2d(ndx,idx,jdx) = bounds_latvalue_curvilinear_read_from_file(ndx,idx, jdx); |
---|
608 | |
---|
609 | bounds_latvalue_curvilinear_read_from_file.free(); |
---|
610 | } |
---|
611 | } |
---|
612 | CATCH_DUMP_ATTR |
---|
613 | |
---|
614 | /* |
---|
615 | Fill in longitude and latitude of unstructured domain read from a file |
---|
616 | If there are already longitude and latitude defined by model. We just igonore reading value. |
---|
617 | */ |
---|
618 | void CDomain::fillInUnstructuredLonLat() |
---|
619 | TRY |
---|
620 | { |
---|
621 | if (i_index.isEmpty()) |
---|
622 | { |
---|
623 | i_index.resize(ni); |
---|
624 | for(int idx = 0; idx < ni; ++idx) i_index(idx)=ibegin+idx; |
---|
625 | } |
---|
626 | |
---|
627 | if (!lonvalue_unstructured_read_from_file.isEmpty() && lonvalue_1d.isEmpty()) |
---|
628 | { |
---|
629 | lonvalue_1d.resize(ni); |
---|
630 | for (int idx = 0; idx < ni; ++idx) |
---|
631 | lonvalue_1d(idx) = lonvalue_unstructured_read_from_file(idx); |
---|
632 | |
---|
633 | // We dont need these values anymore, so just delete them |
---|
634 | lonvalue_unstructured_read_from_file.free(); |
---|
635 | } |
---|
636 | |
---|
637 | if (!latvalue_unstructured_read_from_file.isEmpty() && latvalue_1d.isEmpty()) |
---|
638 | { |
---|
639 | latvalue_1d.resize(ni); |
---|
640 | for (int idx = 0; idx < ni; ++idx) |
---|
641 | latvalue_1d(idx) = latvalue_unstructured_read_from_file(idx); |
---|
642 | |
---|
643 | // We dont need these values anymore, so just delete them |
---|
644 | latvalue_unstructured_read_from_file.free(); |
---|
645 | } |
---|
646 | |
---|
647 | if (!bounds_lonvalue_unstructured_read_from_file.isEmpty() && bounds_lon_1d.isEmpty()) |
---|
648 | { |
---|
649 | int nbVertex = nvertex; |
---|
650 | bounds_lon_1d.resize(nbVertex,ni); |
---|
651 | for (int idx = 0; idx < ni; ++idx) |
---|
652 | for (int jdx = 0; jdx < nbVertex; ++jdx) |
---|
653 | bounds_lon_1d(jdx,idx) = bounds_lonvalue_unstructured_read_from_file(jdx, idx); |
---|
654 | |
---|
655 | // We dont need these values anymore, so just delete them |
---|
656 | bounds_lonvalue_unstructured_read_from_file.free(); |
---|
657 | } |
---|
658 | |
---|
659 | if (!bounds_latvalue_unstructured_read_from_file.isEmpty() && bounds_lat_1d.isEmpty()) |
---|
660 | { |
---|
661 | int nbVertex = nvertex; |
---|
662 | bounds_lat_1d.resize(nbVertex,ni); |
---|
663 | for (int idx = 0; idx < ni; ++idx) |
---|
664 | for (int jdx = 0; jdx < nbVertex; ++jdx) |
---|
665 | bounds_lat_1d(jdx,idx) = bounds_latvalue_unstructured_read_from_file(jdx, idx); |
---|
666 | |
---|
667 | // We dont need these values anymore, so just delete them |
---|
668 | bounds_latvalue_unstructured_read_from_file.free(); |
---|
669 | } |
---|
670 | } |
---|
671 | CATCH_DUMP_ATTR |
---|
672 | |
---|
673 | /* |
---|
674 | Get global longitude and latitude of rectilinear domain. |
---|
675 | */ |
---|
676 | void CDomain::AllgatherRectilinearLonLat(CArray<double,1>& lon, CArray<double,1>& lat, CArray<double,1>& lon_g, CArray<double,1>& lat_g) |
---|
677 | TRY |
---|
678 | { |
---|
679 | CContext* context = CContext::getCurrent(); |
---|
680 | // For now the assumption is that secondary server pools consist of the same number of procs. |
---|
681 | // CHANGE the line below if the assumption changes. |
---|
682 | CContextClient* client = (0 != context->clientPrimServer.size()) ? context->clientPrimServer[0] : context->client; |
---|
683 | lon_g.resize(ni_glo) ; |
---|
684 | lat_g.resize(nj_glo) ; |
---|
685 | |
---|
686 | |
---|
687 | int* ibegin_g = new int[client->clientSize] ; |
---|
688 | int* jbegin_g = new int[client->clientSize] ; |
---|
689 | int* ni_g = new int[client->clientSize] ; |
---|
690 | int* nj_g = new int[client->clientSize] ; |
---|
691 | int v ; |
---|
692 | v=ibegin ; |
---|
693 | MPI_Allgather(&v,1,MPI_INT,ibegin_g,1,MPI_INT,client->intraComm) ; |
---|
694 | v=jbegin ; |
---|
695 | MPI_Allgather(&v,1,MPI_INT,jbegin_g,1,MPI_INT,client->intraComm) ; |
---|
696 | v=ni ; |
---|
697 | MPI_Allgather(&v,1,MPI_INT,ni_g,1,MPI_INT,client->intraComm) ; |
---|
698 | v=nj ; |
---|
699 | MPI_Allgather(&v,1,MPI_INT,nj_g,1,MPI_INT,client->intraComm) ; |
---|
700 | |
---|
701 | MPI_Allgatherv(lon.dataFirst(),ni,MPI_DOUBLE,lon_g.dataFirst(),ni_g, ibegin_g,MPI_DOUBLE,client->intraComm) ; |
---|
702 | MPI_Allgatherv(lat.dataFirst(),nj,MPI_DOUBLE,lat_g.dataFirst(),nj_g, jbegin_g,MPI_DOUBLE,client->intraComm) ; |
---|
703 | |
---|
704 | delete[] ibegin_g ; |
---|
705 | delete[] jbegin_g ; |
---|
706 | delete[] ni_g ; |
---|
707 | delete[] nj_g ; |
---|
708 | } |
---|
709 | CATCH_DUMP_ATTR |
---|
710 | |
---|
711 | void CDomain::fillInRectilinearBoundLonLat(CArray<double,1>& lon, CArray<double,1>& lat, |
---|
712 | CArray<double,2>& boundsLon, CArray<double,2>& boundsLat) |
---|
713 | TRY |
---|
714 | { |
---|
715 | int i,j,k; |
---|
716 | |
---|
717 | const int nvertexValue = 4; |
---|
718 | boundsLon.resize(nvertexValue,ni*nj); |
---|
719 | |
---|
720 | if (ni_glo>1) |
---|
721 | { |
---|
722 | double lonStepStart = lon(1)-lon(0); |
---|
723 | bounds_lon_start=lon(0) - lonStepStart/2; |
---|
724 | double lonStepEnd = lon(ni_glo-1)-lon(ni_glo-2); |
---|
725 | bounds_lon_end=lon(ni_glo-1) + lonStepEnd/2; |
---|
726 | double errorBoundsLon = std::abs(360-std::abs(bounds_lon_end-bounds_lon_start)); |
---|
727 | |
---|
728 | // if errorBoundsLon is reasonably small (0.1 x cell size) consider it as closed in longitude |
---|
729 | if (errorBoundsLon < std::abs(lonStepStart)*1e-1 || errorBoundsLon < std::abs(lonStepEnd)*1e-1 ) |
---|
730 | { |
---|
731 | bounds_lon_start= (lon(0) + lon(ni_glo-1)-360)/2 ; |
---|
732 | bounds_lon_end= (lon(0) +360 + lon(ni_glo-1))/2 ; |
---|
733 | } |
---|
734 | } |
---|
735 | else |
---|
736 | { |
---|
737 | if (bounds_lon_start.isEmpty()) bounds_lon_start=-180. ; |
---|
738 | if (bounds_lon_end.isEmpty()) bounds_lon_end=180.-1e-8 ; |
---|
739 | } |
---|
740 | |
---|
741 | for(j=0;j<nj;++j) |
---|
742 | for(i=0;i<ni;++i) |
---|
743 | { |
---|
744 | k=j*ni+i; |
---|
745 | boundsLon(0,k) = boundsLon(1,k) = (0 == (ibegin + i)) ? bounds_lon_start |
---|
746 | : (lon(ibegin + i)+lon(ibegin + i-1))/2; |
---|
747 | boundsLon(2,k) = boundsLon(3,k) = ((ibegin + i + 1) == ni_glo) ? bounds_lon_end |
---|
748 | : (lon(ibegin + i + 1)+lon(ibegin + i))/2; |
---|
749 | } |
---|
750 | |
---|
751 | |
---|
752 | boundsLat.resize(nvertexValue,nj*ni); |
---|
753 | bool isNorthPole=false ; |
---|
754 | bool isSouthPole=false ; |
---|
755 | if (std::abs(90 - std::abs(lat(0))) < NumTraits<double>::epsilon()) isNorthPole = true; |
---|
756 | if (std::abs(90 - std::abs(lat(nj_glo-1))) < NumTraits<double>::epsilon()) isSouthPole = true; |
---|
757 | |
---|
758 | // lat boundaries beyond pole the assimilate it to pole |
---|
759 | // lat boundarie is relativelly close to pole (0.1 x cell size) assimilate it to pole |
---|
760 | if (nj_glo>1) |
---|
761 | { |
---|
762 | double latStepStart = lat(1)-lat(0); |
---|
763 | if (isNorthPole) bounds_lat_start=lat(0); |
---|
764 | else |
---|
765 | { |
---|
766 | bounds_lat_start=lat(0)-latStepStart/2; |
---|
767 | if (bounds_lat_start >= 90 ) bounds_lat_start=90 ; |
---|
768 | else if (bounds_lat_start <= -90 ) bounds_lat_start=-90 ; |
---|
769 | else if (bounds_lat_start <= 90 && bounds_lat_start >= lat(0)) |
---|
770 | { |
---|
771 | if ( std::abs(90-bounds_lat_start) <= 0.1*std::abs(latStepStart)) bounds_lat_start=90 ; |
---|
772 | } |
---|
773 | else if (bounds_lat_start >= -90 && bounds_lat_start <= lat(0)) |
---|
774 | { |
---|
775 | if ( std::abs(-90 - bounds_lat_start) <= 0.1*std::abs(latStepStart)) bounds_lat_start=-90 ; |
---|
776 | } |
---|
777 | } |
---|
778 | |
---|
779 | double latStepEnd = lat(nj_glo-1)-lat(nj_glo-2); |
---|
780 | if (isSouthPole) bounds_lat_end=lat(nj_glo-1); |
---|
781 | else |
---|
782 | { |
---|
783 | bounds_lat_end=lat(nj_glo-1)+latStepEnd/2; |
---|
784 | |
---|
785 | if (bounds_lat_end >= 90 ) bounds_lat_end=90 ; |
---|
786 | else if (bounds_lat_end <= -90 ) bounds_lat_end=-90 ; |
---|
787 | else if (bounds_lat_end <= 90 && bounds_lat_end >= lat(nj_glo-1)) |
---|
788 | { |
---|
789 | if ( std::abs(90-bounds_lat_end) <= 0.1*std::abs(latStepEnd)) bounds_lat_end=90 ; |
---|
790 | } |
---|
791 | else if (bounds_lat_end >= -90 && bounds_lat_end <= lat(nj_glo-1)) |
---|
792 | { |
---|
793 | if ( std::abs(-90 - bounds_lat_end) <= 0.1*std::abs(latStepEnd)) bounds_lat_end=-90 ; |
---|
794 | } |
---|
795 | } |
---|
796 | } |
---|
797 | else |
---|
798 | { |
---|
799 | if (bounds_lat_start.isEmpty()) bounds_lat_start=-90. ; |
---|
800 | if (bounds_lat_end.isEmpty()) bounds_lat_end=90 ; |
---|
801 | } |
---|
802 | |
---|
803 | for(j=0;j<nj;++j) |
---|
804 | for(i=0;i<ni;++i) |
---|
805 | { |
---|
806 | k=j*ni+i; |
---|
807 | boundsLat(1,k) = boundsLat(2,k) = (0 == (jbegin + j)) ? bounds_lat_start |
---|
808 | : (lat(jbegin + j)+lat(jbegin + j-1))/2; |
---|
809 | boundsLat(0,k) = boundsLat(3,k) = ((jbegin + j +1) == nj_glo) ? bounds_lat_end |
---|
810 | : (lat(jbegin + j + 1)+lat(jbegin + j))/2; |
---|
811 | } |
---|
812 | } |
---|
813 | CATCH_DUMP_ATTR |
---|
814 | |
---|
815 | /* |
---|
816 | General check of the domain to verify its mandatory attributes |
---|
817 | */ |
---|
818 | void CDomain::checkDomain(void) |
---|
819 | TRY |
---|
820 | { |
---|
821 | if (type.isEmpty()) |
---|
822 | { |
---|
823 | ERROR("CDomain::checkDomain(void)", |
---|
824 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
825 | << "The domain type is mandatory, " |
---|
826 | << "please define the 'type' attribute.") |
---|
827 | } |
---|
828 | |
---|
829 | if (type == type_attr::gaussian) |
---|
830 | { |
---|
831 | hasPole=true ; |
---|
832 | type.setValue(type_attr::unstructured) ; |
---|
833 | } |
---|
834 | else if (type == type_attr::rectilinear) hasPole=true ; |
---|
835 | |
---|
836 | if (type == type_attr::unstructured) |
---|
837 | { |
---|
838 | if (ni_glo.isEmpty()) |
---|
839 | { |
---|
840 | ERROR("CDomain::checkDomain(void)", |
---|
841 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
842 | << "The global domain is badly defined, " |
---|
843 | << "the mandatory 'ni_glo' attribute is missing.") |
---|
844 | } |
---|
845 | else if (ni_glo <= 0) |
---|
846 | { |
---|
847 | ERROR("CDomain::checkDomain(void)", |
---|
848 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
849 | << "The global domain is badly defined, " |
---|
850 | << "'ni_glo' attribute should be strictly positive so 'ni_glo = " << ni_glo.getValue() << "' is invalid.") |
---|
851 | } |
---|
852 | isUnstructed_ = true; |
---|
853 | nj_glo = 1; |
---|
854 | nj = 1; |
---|
855 | jbegin = 0; |
---|
856 | if (!i_index.isEmpty()) ni = i_index.numElements(); |
---|
857 | j_index.resize(ni); |
---|
858 | for(int i=0;i<ni;++i) j_index(i)=0; |
---|
859 | |
---|
860 | if (!area.isEmpty()) |
---|
861 | area.transposeSelf(1, 0); |
---|
862 | } |
---|
863 | |
---|
864 | if (ni_glo.isEmpty()) |
---|
865 | { |
---|
866 | ERROR("CDomain::checkDomain(void)", |
---|
867 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
868 | << "The global domain is badly defined, " |
---|
869 | << "the mandatory 'ni_glo' attribute is missing.") |
---|
870 | } |
---|
871 | else if (ni_glo <= 0) |
---|
872 | { |
---|
873 | ERROR("CDomain::checkDomain(void)", |
---|
874 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
875 | << "The global domain is badly defined, " |
---|
876 | << "'ni_glo' attribute should be strictly positive so 'ni_glo = " << ni_glo.getValue() << "' is invalid.") |
---|
877 | } |
---|
878 | |
---|
879 | if (nj_glo.isEmpty()) |
---|
880 | { |
---|
881 | ERROR("CDomain::checkDomain(void)", |
---|
882 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
883 | << "The global domain is badly defined, " |
---|
884 | << "the mandatory 'nj_glo' attribute is missing.") |
---|
885 | } |
---|
886 | else if (nj_glo <= 0) |
---|
887 | { |
---|
888 | ERROR("CDomain::checkDomain(void)", |
---|
889 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
890 | << "The global domain is badly defined, " |
---|
891 | << "'nj_glo' attribute should be strictly positive so 'nj_glo = " << nj_glo.getValue() << "' is invalid.") |
---|
892 | } |
---|
893 | |
---|
894 | checkLocalIDomain(); |
---|
895 | checkLocalJDomain(); |
---|
896 | |
---|
897 | if (i_index.isEmpty()) |
---|
898 | { |
---|
899 | i_index.resize(ni*nj); |
---|
900 | for (int j = 0; j < nj; ++j) |
---|
901 | for (int i = 0; i < ni; ++i) i_index(i+j*ni) = i+ibegin; |
---|
902 | } |
---|
903 | |
---|
904 | if (j_index.isEmpty()) |
---|
905 | { |
---|
906 | j_index.resize(ni*nj); |
---|
907 | for (int j = 0; j < nj; ++j) |
---|
908 | for (int i = 0; i < ni; ++i) j_index(i+j*ni) = j+jbegin; |
---|
909 | } |
---|
910 | } |
---|
911 | CATCH_DUMP_ATTR |
---|
912 | |
---|
913 | size_t CDomain::getGlobalWrittenSize(void) |
---|
914 | { |
---|
915 | return ni_glo*nj_glo ; |
---|
916 | } |
---|
917 | //---------------------------------------------------------------- |
---|
918 | |
---|
919 | // Check validity of local domain on using the combination of 3 parameters: ibegin, ni and i_index |
---|
920 | void CDomain::checkLocalIDomain(void) |
---|
921 | TRY |
---|
922 | { |
---|
923 | // If ibegin and ni are provided then we use them to check the validity of local domain |
---|
924 | if (i_index.isEmpty() && !ibegin.isEmpty() && !ni.isEmpty()) |
---|
925 | { |
---|
926 | if ((ni.getValue() < 0 || ibegin.getValue() < 0) || ((ibegin.getValue() + ni.getValue()) > ni_glo.getValue())) |
---|
927 | { |
---|
928 | ERROR("CDomain::checkLocalIDomain(void)", |
---|
929 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
930 | << "The local domain is wrongly defined," |
---|
931 | << " check the attributes 'ni_glo' (" << ni_glo.getValue() << "), 'ni' (" << ni.getValue() << ") and 'ibegin' (" << ibegin.getValue() << ")"); |
---|
932 | } |
---|
933 | } |
---|
934 | |
---|
935 | // i_index has higher priority than ibegin and ni |
---|
936 | if (!i_index.isEmpty()) |
---|
937 | { |
---|
938 | int minIIndex = (0 < i_index.numElements()) ? i_index(0) : 0; |
---|
939 | if (ni.isEmpty()) |
---|
940 | { |
---|
941 | // No information about ni |
---|
942 | int minIndex = ni_glo - 1; |
---|
943 | int maxIndex = 0; |
---|
944 | for (int idx = 0; idx < i_index.numElements(); ++idx) |
---|
945 | { |
---|
946 | if (i_index(idx) < minIndex) minIndex = i_index(idx); |
---|
947 | if (i_index(idx) > maxIndex) maxIndex = i_index(idx); |
---|
948 | } |
---|
949 | ni = maxIndex - minIndex + 1; |
---|
950 | minIIndex = minIIndex; |
---|
951 | } |
---|
952 | |
---|
953 | // It's not so correct but if ibegin is not the first value of i_index |
---|
954 | // then data on local domain has user-defined distribution. In this case, ibegin, ni have no meaning. |
---|
955 | if (ibegin.isEmpty()) ibegin = minIIndex; |
---|
956 | } |
---|
957 | else if (ibegin.isEmpty() && ni.isEmpty()) |
---|
958 | { |
---|
959 | ibegin = 0; |
---|
960 | ni = ni_glo; |
---|
961 | } |
---|
962 | else if ((!ibegin.isEmpty() && ni.isEmpty()) || (ibegin.isEmpty() && !ni.isEmpty())) |
---|
963 | { |
---|
964 | ERROR("CDomain::checkLocalIDomain(void)", |
---|
965 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
966 | << "The local domain is wrongly defined," << endl |
---|
967 | << "i_index is empty and either 'ni' or 'ibegin' is not defined. " |
---|
968 | << "If 'ni' and 'ibegin' are used to define a domain, both of them must not be empty."); |
---|
969 | } |
---|
970 | |
---|
971 | |
---|
972 | if ((ni.getValue() < 0 || ibegin.getValue() < 0)) |
---|
973 | { |
---|
974 | ERROR("CDomain::checkLocalIDomain(void)", |
---|
975 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
976 | << "The local domain is wrongly defined," |
---|
977 | << " check the attributes 'ni_glo' (" << ni_glo.getValue() << "), 'ni' (" << ni.getValue() << ") and 'ibegin' (" << ibegin.getValue() << ")"); |
---|
978 | } |
---|
979 | } |
---|
980 | CATCH_DUMP_ATTR |
---|
981 | |
---|
982 | // Check validity of local domain on using the combination of 3 parameters: jbegin, nj and j_index |
---|
983 | void CDomain::checkLocalJDomain(void) |
---|
984 | TRY |
---|
985 | { |
---|
986 | // If jbegin and nj are provided then we use them to check the validity of local domain |
---|
987 | if (j_index.isEmpty() && !jbegin.isEmpty() && !nj.isEmpty()) |
---|
988 | { |
---|
989 | if ((nj.getValue() < 0 || jbegin.getValue() < 0) || (jbegin.getValue() + nj.getValue()) > nj_glo.getValue()) |
---|
990 | { |
---|
991 | ERROR("CDomain::checkLocalJDomain(void)", |
---|
992 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
993 | << "The local domain is wrongly defined," |
---|
994 | << " check the attributes 'nj_glo' (" << nj_glo.getValue() << "), 'nj' (" << nj.getValue() << ") and 'jbegin' (" << jbegin.getValue() << ")"); |
---|
995 | } |
---|
996 | } |
---|
997 | |
---|
998 | if (!j_index.isEmpty()) |
---|
999 | { |
---|
1000 | int minJIndex = (0 < j_index.numElements()) ? j_index(0) : 0; |
---|
1001 | if (nj.isEmpty()) |
---|
1002 | { |
---|
1003 | // No information about nj |
---|
1004 | int minIndex = nj_glo - 1; |
---|
1005 | int maxIndex = 0; |
---|
1006 | for (int idx = 0; idx < j_index.numElements(); ++idx) |
---|
1007 | { |
---|
1008 | if (j_index(idx) < minIndex) minIndex = j_index(idx); |
---|
1009 | if (j_index(idx) > maxIndex) maxIndex = j_index(idx); |
---|
1010 | } |
---|
1011 | nj = maxIndex - minIndex + 1; |
---|
1012 | minJIndex = minIndex; |
---|
1013 | } |
---|
1014 | // It's the same as checkLocalIDomain. It's not so correct but if jbegin is not the first value of j_index |
---|
1015 | // then data on local domain has user-defined distribution. In this case, jbegin has no meaning. |
---|
1016 | if (jbegin.isEmpty()) jbegin = minJIndex; |
---|
1017 | } |
---|
1018 | else if (jbegin.isEmpty() && nj.isEmpty()) |
---|
1019 | { |
---|
1020 | jbegin = 0; |
---|
1021 | nj = nj_glo; |
---|
1022 | } |
---|
1023 | |
---|
1024 | |
---|
1025 | if ((nj.getValue() < 0 || jbegin.getValue() < 0)) |
---|
1026 | { |
---|
1027 | ERROR("CDomain::checkLocalJDomain(void)", |
---|
1028 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1029 | << "The local domain is wrongly defined," |
---|
1030 | << " check the attributes 'nj_glo' (" << nj_glo.getValue() << "), 'nj' (" << nj.getValue() << ") and 'jbegin' (" << jbegin.getValue() << ")"); |
---|
1031 | } |
---|
1032 | } |
---|
1033 | CATCH_DUMP_ATTR |
---|
1034 | |
---|
1035 | //---------------------------------------------------------------- |
---|
1036 | |
---|
1037 | void CDomain::checkMask(void) |
---|
1038 | TRY |
---|
1039 | { |
---|
1040 | if (!mask_1d.isEmpty() && !mask_2d.isEmpty()) |
---|
1041 | ERROR("CDomain::checkMask(void)", |
---|
1042 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1043 | << "Both mask_1d and mask_2d are defined but only one can be used at the same time." << std::endl |
---|
1044 | << "Please define only one mask: 'mask_1d' or 'mask_2d'."); |
---|
1045 | |
---|
1046 | if (!mask_1d.isEmpty() && mask_2d.isEmpty()) |
---|
1047 | { |
---|
1048 | if (mask_1d.numElements() != i_index.numElements()) |
---|
1049 | ERROR("CDomain::checkMask(void)", |
---|
1050 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1051 | << "'mask_1d' does not have the same size as the local domain." << std::endl |
---|
1052 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
1053 | << "Mask size is " << mask_1d.numElements() << "."); |
---|
1054 | } |
---|
1055 | |
---|
1056 | if (mask_1d.isEmpty() && !mask_2d.isEmpty()) |
---|
1057 | { |
---|
1058 | if (mask_2d.extent(0) != ni || mask_2d.extent(1) != nj) |
---|
1059 | ERROR("CDomain::checkMask(void)", |
---|
1060 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1061 | << "The mask does not have the same size as the local domain." << std::endl |
---|
1062 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
1063 | << "Mask size is " << mask_2d.extent(0) << " x " << mask_2d.extent(1) << "."); |
---|
1064 | } |
---|
1065 | |
---|
1066 | if (!mask_2d.isEmpty()) |
---|
1067 | { |
---|
1068 | domainMask.resize(mask_2d.extent(0) * mask_2d.extent(1)); |
---|
1069 | for (int j = 0; j < nj; ++j) |
---|
1070 | for (int i = 0; i < ni; ++i) domainMask(i+j*ni) = mask_2d(i,j); |
---|
1071 | // mask_2d.reset(); |
---|
1072 | } |
---|
1073 | else if (mask_1d.isEmpty()) |
---|
1074 | { |
---|
1075 | domainMask.resize(i_index.numElements()); |
---|
1076 | for (int i = 0; i < i_index.numElements(); ++i) domainMask(i) = true; |
---|
1077 | } |
---|
1078 | else |
---|
1079 | { |
---|
1080 | domainMask.resize(mask_1d.numElements()); |
---|
1081 | domainMask=mask_1d ; |
---|
1082 | } |
---|
1083 | } |
---|
1084 | CATCH_DUMP_ATTR |
---|
1085 | |
---|
1086 | //---------------------------------------------------------------- |
---|
1087 | |
---|
1088 | void CDomain::checkDomainData(void) |
---|
1089 | TRY |
---|
1090 | { |
---|
1091 | if (data_dim.isEmpty()) |
---|
1092 | { |
---|
1093 | data_dim.setValue(1); |
---|
1094 | } |
---|
1095 | else if (!(data_dim.getValue() == 1 || data_dim.getValue() == 2)) |
---|
1096 | { |
---|
1097 | ERROR("CDomain::checkDomainData(void)", |
---|
1098 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1099 | << "The data dimension is invalid, 'data_dim' must be 1 or 2 not << " << data_dim.getValue() << "."); |
---|
1100 | } |
---|
1101 | |
---|
1102 | if (data_ibegin.isEmpty()) |
---|
1103 | data_ibegin.setValue(0); |
---|
1104 | if (data_jbegin.isEmpty()) |
---|
1105 | data_jbegin.setValue(0); |
---|
1106 | |
---|
1107 | if (data_ni.isEmpty()) |
---|
1108 | { |
---|
1109 | data_ni.setValue((data_dim == 1) ? (ni.getValue() * nj.getValue()) : ni.getValue()); |
---|
1110 | } |
---|
1111 | else if (data_ni.getValue() < 0) |
---|
1112 | { |
---|
1113 | ERROR("CDomain::checkDomainData(void)", |
---|
1114 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1115 | << "The data size cannot be negative ('data_ni' = " << data_ni.getValue() << ")."); |
---|
1116 | } |
---|
1117 | |
---|
1118 | if (data_nj.isEmpty()) |
---|
1119 | { |
---|
1120 | data_nj.setValue((data_dim.getValue() == 1) ? (ni.getValue() * nj.getValue()) : nj.getValue()); |
---|
1121 | } |
---|
1122 | else if (data_nj.getValue() < 0) |
---|
1123 | { |
---|
1124 | ERROR("CDomain::checkDomainData(void)", |
---|
1125 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1126 | << "The data size cannot be negative ('data_nj' = " << data_nj.getValue() << ")."); |
---|
1127 | } |
---|
1128 | } |
---|
1129 | CATCH_DUMP_ATTR |
---|
1130 | |
---|
1131 | //---------------------------------------------------------------- |
---|
1132 | |
---|
1133 | void CDomain::checkCompression(void) |
---|
1134 | TRY |
---|
1135 | { |
---|
1136 | int i,j,ind; |
---|
1137 | if (!data_i_index.isEmpty()) |
---|
1138 | { |
---|
1139 | if (!data_j_index.isEmpty() && |
---|
1140 | data_j_index.numElements() != data_i_index.numElements()) |
---|
1141 | { |
---|
1142 | ERROR("CDomain::checkCompression(void)", |
---|
1143 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1144 | << "'data_i_index' and 'data_j_index' arrays must have the same size." << std::endl |
---|
1145 | << "'data_i_index' size = " << data_i_index.numElements() << std::endl |
---|
1146 | << "'data_j_index' size = " << data_j_index.numElements()); |
---|
1147 | } |
---|
1148 | |
---|
1149 | if (2 == data_dim) |
---|
1150 | { |
---|
1151 | if (data_j_index.isEmpty()) |
---|
1152 | { |
---|
1153 | ERROR("CDomain::checkCompression(void)", |
---|
1154 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1155 | << "'data_j_index' must be defined when 'data_i_index' is set and 'data_dim' is 2."); |
---|
1156 | } |
---|
1157 | for (int k=0; k<data_i_index.numElements(); ++k) |
---|
1158 | { |
---|
1159 | i = data_i_index(k)+data_ibegin ; |
---|
1160 | j = data_j_index(k)+data_jbegin ; |
---|
1161 | if (i>=0 && i<ni && j>=0 && j<nj) |
---|
1162 | { |
---|
1163 | ind=j*ni+i ; |
---|
1164 | if (!domainMask(ind)) |
---|
1165 | { |
---|
1166 | data_i_index(k) = -1; |
---|
1167 | data_j_index(k) = -1; |
---|
1168 | } |
---|
1169 | } |
---|
1170 | else |
---|
1171 | { |
---|
1172 | data_i_index(k) = -1; |
---|
1173 | data_j_index(k) = -1; |
---|
1174 | } |
---|
1175 | } |
---|
1176 | } |
---|
1177 | else // (1 == data_dim) |
---|
1178 | { |
---|
1179 | if (data_j_index.isEmpty()) |
---|
1180 | { |
---|
1181 | data_j_index.resize(data_ni); |
---|
1182 | data_j_index = 0; |
---|
1183 | } |
---|
1184 | for (int k=0; k<data_i_index.numElements(); ++k) |
---|
1185 | { |
---|
1186 | i=data_i_index(k)+data_ibegin ; |
---|
1187 | if (i>=0 && i < domainMask.size()) |
---|
1188 | { |
---|
1189 | if (!domainMask(i)) data_i_index(k) = -1; |
---|
1190 | } |
---|
1191 | else |
---|
1192 | data_i_index(k) = -1; |
---|
1193 | |
---|
1194 | if (!domainMask(i)) data_i_index(k) = -1; |
---|
1195 | } |
---|
1196 | } |
---|
1197 | } |
---|
1198 | else |
---|
1199 | { |
---|
1200 | if (data_dim == 2 && !data_j_index.isEmpty()) |
---|
1201 | ERROR("CDomain::checkCompression(void)", |
---|
1202 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1203 | << "'data_i_index' must be defined when 'data_j_index' is set and 'data_dim' is 2."); |
---|
1204 | |
---|
1205 | if (1 == data_dim) |
---|
1206 | { |
---|
1207 | data_i_index.resize(data_ni); |
---|
1208 | data_j_index.resize(data_ni); |
---|
1209 | data_j_index = 0; |
---|
1210 | |
---|
1211 | for (int k = 0; k < data_ni; ++k) |
---|
1212 | { |
---|
1213 | i=k+data_ibegin ; |
---|
1214 | if (i>=0 && i < domainMask.size()) |
---|
1215 | { |
---|
1216 | if (domainMask(i)) |
---|
1217 | data_i_index(k) = k; |
---|
1218 | else |
---|
1219 | data_i_index(k) = -1; |
---|
1220 | } |
---|
1221 | else |
---|
1222 | data_i_index(k) = -1; |
---|
1223 | } |
---|
1224 | } |
---|
1225 | else // (data_dim == 2) |
---|
1226 | { |
---|
1227 | const int dsize = data_ni * data_nj; |
---|
1228 | data_i_index.resize(dsize); |
---|
1229 | data_j_index.resize(dsize); |
---|
1230 | |
---|
1231 | for(int count = 0, kj = 0; kj < data_nj; ++kj) |
---|
1232 | { |
---|
1233 | for(int ki = 0; ki < data_ni; ++ki, ++count) |
---|
1234 | { |
---|
1235 | i = ki + data_ibegin; |
---|
1236 | j = kj + data_jbegin; |
---|
1237 | ind=j*ni+i ; |
---|
1238 | if (i>=0 && i<ni && j>=0 && j<nj) |
---|
1239 | { |
---|
1240 | if (domainMask(ind)) |
---|
1241 | { |
---|
1242 | data_i_index(count) = ki; |
---|
1243 | data_j_index(count) = kj; |
---|
1244 | } |
---|
1245 | else |
---|
1246 | { |
---|
1247 | data_i_index(count) = -1; |
---|
1248 | data_j_index(count) = -1; |
---|
1249 | } |
---|
1250 | } |
---|
1251 | else |
---|
1252 | { |
---|
1253 | data_i_index(count) = -1; |
---|
1254 | data_j_index(count) = -1; |
---|
1255 | } |
---|
1256 | } |
---|
1257 | } |
---|
1258 | } |
---|
1259 | } |
---|
1260 | } |
---|
1261 | CATCH_DUMP_ATTR |
---|
1262 | |
---|
1263 | //---------------------------------------------------------------- |
---|
1264 | void CDomain::computeLocalMask(void) |
---|
1265 | TRY |
---|
1266 | { |
---|
1267 | localMask.resize(i_index.numElements()) ; |
---|
1268 | localMask=false ; |
---|
1269 | |
---|
1270 | size_t dn=data_i_index.numElements() ; |
---|
1271 | int i,j ; |
---|
1272 | size_t k,ind ; |
---|
1273 | |
---|
1274 | for(k=0;k<dn;k++) |
---|
1275 | { |
---|
1276 | if (data_dim==2) |
---|
1277 | { |
---|
1278 | i=data_i_index(k)+data_ibegin ; |
---|
1279 | j=data_j_index(k)+data_jbegin ; |
---|
1280 | if (i>=0 && i<ni && j>=0 && j<nj) |
---|
1281 | { |
---|
1282 | ind=j*ni+i ; |
---|
1283 | localMask(ind)=domainMask(ind) ; |
---|
1284 | } |
---|
1285 | } |
---|
1286 | else |
---|
1287 | { |
---|
1288 | i=data_i_index(k)+data_ibegin ; |
---|
1289 | if (i>=0 && i<i_index.numElements()) |
---|
1290 | { |
---|
1291 | ind=i ; |
---|
1292 | localMask(ind)=domainMask(ind) ; |
---|
1293 | } |
---|
1294 | } |
---|
1295 | } |
---|
1296 | } |
---|
1297 | CATCH_DUMP_ATTR |
---|
1298 | |
---|
1299 | void CDomain::checkEligibilityForCompressedOutput(void) |
---|
1300 | TRY |
---|
1301 | { |
---|
1302 | // We don't check if the mask or the indexes are valid here, just if they have been defined at this point. |
---|
1303 | isCompressible_ = !mask_1d.isEmpty() || !mask_2d.isEmpty() || !data_i_index.isEmpty(); |
---|
1304 | } |
---|
1305 | CATCH_DUMP_ATTR |
---|
1306 | |
---|
1307 | //---------------------------------------------------------------- |
---|
1308 | |
---|
1309 | /* |
---|
1310 | Fill in longitude, latitude, bounds, and area into internal values (lonvalue, latvalue, bounds_lonvalue, bounds_latvalue, areavalue) |
---|
1311 | which will be used by XIOS. |
---|
1312 | */ |
---|
1313 | void CDomain::completeLonLatClient(void) |
---|
1314 | TRY |
---|
1315 | { |
---|
1316 | bool lonlatValueExisted = (0 != lonvalue.numElements()) || (0 != latvalue.numElements()); |
---|
1317 | checkBounds() ; |
---|
1318 | checkArea() ; |
---|
1319 | |
---|
1320 | if (!lonvalue_2d.isEmpty() && !lonlatValueExisted) |
---|
1321 | { |
---|
1322 | lonvalue.resize(ni * nj); |
---|
1323 | latvalue.resize(ni * nj); |
---|
1324 | if (hasBounds) |
---|
1325 | { |
---|
1326 | bounds_lonvalue.resize(nvertex, ni * nj); |
---|
1327 | bounds_latvalue.resize(nvertex, ni * nj); |
---|
1328 | } |
---|
1329 | |
---|
1330 | for (int j = 0; j < nj; ++j) |
---|
1331 | { |
---|
1332 | for (int i = 0; i < ni; ++i) |
---|
1333 | { |
---|
1334 | int k = j * ni + i; |
---|
1335 | |
---|
1336 | lonvalue(k) = lonvalue_2d(i,j); |
---|
1337 | latvalue(k) = latvalue_2d(i,j); |
---|
1338 | |
---|
1339 | if (hasBounds) |
---|
1340 | { |
---|
1341 | for (int n = 0; n < nvertex; ++n) |
---|
1342 | { |
---|
1343 | bounds_lonvalue(n,k) = bounds_lon_2d(n,i,j); |
---|
1344 | bounds_latvalue(n,k) = bounds_lat_2d(n,i,j); |
---|
1345 | } |
---|
1346 | } |
---|
1347 | } |
---|
1348 | } |
---|
1349 | } |
---|
1350 | else if (!lonvalue_1d.isEmpty() && !lonlatValueExisted) |
---|
1351 | { |
---|
1352 | if (type_attr::rectilinear == type) |
---|
1353 | { |
---|
1354 | if (ni == lonvalue_1d.numElements() && nj == latvalue_1d.numElements()) |
---|
1355 | { |
---|
1356 | lonvalue.resize(ni * nj); |
---|
1357 | latvalue.resize(ni * nj); |
---|
1358 | if (hasBounds) |
---|
1359 | { |
---|
1360 | bounds_lonvalue.resize(nvertex, ni * nj); |
---|
1361 | bounds_latvalue.resize(nvertex, ni * nj); |
---|
1362 | } |
---|
1363 | |
---|
1364 | for (int j = 0; j < nj; ++j) |
---|
1365 | { |
---|
1366 | for (int i = 0; i < ni; ++i) |
---|
1367 | { |
---|
1368 | int k = j * ni + i; |
---|
1369 | |
---|
1370 | lonvalue(k) = lonvalue_1d(i); |
---|
1371 | latvalue(k) = latvalue_1d(j); |
---|
1372 | |
---|
1373 | if (hasBounds) |
---|
1374 | { |
---|
1375 | for (int n = 0; n < nvertex; ++n) |
---|
1376 | { |
---|
1377 | bounds_lonvalue(n,k) = bounds_lon_1d(n,i); |
---|
1378 | bounds_latvalue(n,k) = bounds_lat_1d(n,j); |
---|
1379 | } |
---|
1380 | } |
---|
1381 | } |
---|
1382 | } |
---|
1383 | } |
---|
1384 | else if (i_index.numElements() == lonvalue_1d.numElements() && j_index.numElements() == latvalue_1d.numElements() && !lonlatValueExisted) |
---|
1385 | { |
---|
1386 | lonvalue.reference(lonvalue_1d); |
---|
1387 | latvalue.reference(latvalue_1d); |
---|
1388 | if (hasBounds) |
---|
1389 | { |
---|
1390 | bounds_lonvalue.reference(bounds_lon_1d); |
---|
1391 | bounds_latvalue.reference(bounds_lat_1d); |
---|
1392 | } |
---|
1393 | } |
---|
1394 | else |
---|
1395 | ERROR("CDomain::completeLonClient(void)", |
---|
1396 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1397 | << "'lonvalue_1d' and 'latvalue_1d' does not have the same size as the local domain." << std::endl |
---|
1398 | << "'lonvalue_1d' size is " << lonvalue_1d.numElements() |
---|
1399 | << " and 'latvalue_1d' size is " << latvalue_1d.numElements() << std::endl |
---|
1400 | << " They should be correspondingly " << ni.getValue() << " and " << nj.getValue() << " or " << std::endl |
---|
1401 | << i_index.numElements() << " and " << j_index.numElements() << "."); |
---|
1402 | } |
---|
1403 | else if (type == type_attr::curvilinear || type == type_attr::unstructured && !lonlatValueExisted) |
---|
1404 | { |
---|
1405 | lonvalue.reference(lonvalue_1d); |
---|
1406 | latvalue.reference(latvalue_1d); |
---|
1407 | if (hasBounds) |
---|
1408 | { |
---|
1409 | bounds_lonvalue.reference(bounds_lon_1d); |
---|
1410 | bounds_latvalue.reference(bounds_lat_1d); |
---|
1411 | } |
---|
1412 | } |
---|
1413 | } |
---|
1414 | |
---|
1415 | if (!area.isEmpty() && areavalue.isEmpty()) |
---|
1416 | { |
---|
1417 | areavalue.resize(ni*nj); |
---|
1418 | for (int j = 0; j < nj; ++j) |
---|
1419 | { |
---|
1420 | for (int i = 0; i < ni; ++i) |
---|
1421 | { |
---|
1422 | int k = j * ni + i; |
---|
1423 | areavalue(k) = area(i,j); |
---|
1424 | } |
---|
1425 | } |
---|
1426 | } |
---|
1427 | } |
---|
1428 | CATCH_DUMP_ATTR |
---|
1429 | |
---|
1430 | /* |
---|
1431 | Convert internal longitude latitude value used by XIOS to "lonvalue_*" which can be retrieved with Fortran interface |
---|
1432 | */ |
---|
1433 | void CDomain::convertLonLatValue(void) |
---|
1434 | TRY |
---|
1435 | { |
---|
1436 | bool lonlatValueExisted = (0 != lonvalue.numElements()) || (0 != latvalue.numElements()); |
---|
1437 | if (!lonvalue_2d.isEmpty() && lonlatValueExisted) |
---|
1438 | { |
---|
1439 | lonvalue_2d.resize(ni,nj); |
---|
1440 | latvalue_2d.resize(ni,nj); |
---|
1441 | if (hasBounds) |
---|
1442 | { |
---|
1443 | bounds_lon_2d.resize(nvertex, ni, nj); |
---|
1444 | bounds_lat_2d.resize(nvertex, ni, nj); |
---|
1445 | } |
---|
1446 | |
---|
1447 | for (int j = 0; j < nj; ++j) |
---|
1448 | { |
---|
1449 | for (int i = 0; i < ni; ++i) |
---|
1450 | { |
---|
1451 | int k = j * ni + i; |
---|
1452 | |
---|
1453 | lonvalue_2d(i,j) = lonvalue(k); |
---|
1454 | latvalue_2d(i,j) = latvalue(k); |
---|
1455 | |
---|
1456 | if (hasBounds) |
---|
1457 | { |
---|
1458 | for (int n = 0; n < nvertex; ++n) |
---|
1459 | { |
---|
1460 | bounds_lon_2d(n,i,j) = bounds_lonvalue(n,k); |
---|
1461 | bounds_lat_2d(n,i,j) = bounds_latvalue(n,k); |
---|
1462 | } |
---|
1463 | } |
---|
1464 | } |
---|
1465 | } |
---|
1466 | } |
---|
1467 | else if (!lonvalue_1d.isEmpty() && lonlatValueExisted) |
---|
1468 | { |
---|
1469 | if (type_attr::rectilinear == type) |
---|
1470 | { |
---|
1471 | if (ni == lonvalue_1d.numElements() && nj == latvalue_1d.numElements()) |
---|
1472 | { |
---|
1473 | lonvalue.resize(ni * nj); |
---|
1474 | latvalue.resize(ni * nj); |
---|
1475 | if (hasBounds) |
---|
1476 | { |
---|
1477 | bounds_lonvalue.resize(nvertex, ni * nj); |
---|
1478 | bounds_latvalue.resize(nvertex, ni * nj); |
---|
1479 | } |
---|
1480 | |
---|
1481 | for (int j = 0; j < nj; ++j) |
---|
1482 | { |
---|
1483 | for (int i = 0; i < ni; ++i) |
---|
1484 | { |
---|
1485 | int k = j * ni + i; |
---|
1486 | |
---|
1487 | lonvalue(k) = lonvalue_1d(i); |
---|
1488 | latvalue(k) = latvalue_1d(j); |
---|
1489 | |
---|
1490 | if (hasBounds) |
---|
1491 | { |
---|
1492 | for (int n = 0; n < nvertex; ++n) |
---|
1493 | { |
---|
1494 | bounds_lonvalue(n,k) = bounds_lon_1d(n,i); |
---|
1495 | bounds_latvalue(n,k) = bounds_lat_1d(n,j); |
---|
1496 | } |
---|
1497 | } |
---|
1498 | } |
---|
1499 | } |
---|
1500 | } |
---|
1501 | else if (i_index.numElements() == lonvalue_1d.numElements() && j_index.numElements() == latvalue_1d.numElements() && !lonlatValueExisted) |
---|
1502 | { |
---|
1503 | lonvalue.reference(lonvalue_1d); |
---|
1504 | latvalue.reference(latvalue_1d); |
---|
1505 | if (hasBounds) |
---|
1506 | { |
---|
1507 | bounds_lonvalue.reference(bounds_lon_1d); |
---|
1508 | bounds_latvalue.reference(bounds_lat_1d); |
---|
1509 | } |
---|
1510 | } |
---|
1511 | else |
---|
1512 | ERROR("CDomain::completeLonClient(void)", |
---|
1513 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1514 | << "'lonvalue_1d' and 'latvalue_1d' does not have the same size as the local domain." << std::endl |
---|
1515 | << "'lonvalue_1d' size is " << lonvalue_1d.numElements() |
---|
1516 | << " and 'latvalue_1d' size is " << latvalue_1d.numElements() << std::endl |
---|
1517 | << " They should be correspondingly " << ni.getValue() << " and " << nj.getValue() << " or " << std::endl |
---|
1518 | << i_index.numElements() << " and " << j_index.numElements() << "."); |
---|
1519 | } |
---|
1520 | else if (type == type_attr::curvilinear || type == type_attr::unstructured && !lonlatValueExisted) |
---|
1521 | { |
---|
1522 | lonvalue.reference(lonvalue_1d); |
---|
1523 | latvalue.reference(latvalue_1d); |
---|
1524 | if (hasBounds) |
---|
1525 | { |
---|
1526 | bounds_lonvalue.reference(bounds_lon_1d); |
---|
1527 | bounds_latvalue.reference(bounds_lat_1d); |
---|
1528 | } |
---|
1529 | } |
---|
1530 | } |
---|
1531 | } |
---|
1532 | CATCH_DUMP_ATTR |
---|
1533 | |
---|
1534 | void CDomain::checkBounds(void) |
---|
1535 | TRY |
---|
1536 | { |
---|
1537 | bool hasBoundValues = (0 != bounds_lonvalue.numElements()) || (0 != bounds_latvalue.numElements()); |
---|
1538 | if (!nvertex.isEmpty() && nvertex > 0 && !hasBoundValues) |
---|
1539 | { |
---|
1540 | if (!bounds_lon_1d.isEmpty() && !bounds_lon_2d.isEmpty()) |
---|
1541 | ERROR("CDomain::checkBounds(void)", |
---|
1542 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1543 | << "Only one longitude boundary attribute can be used but both 'bounds_lon_1d' and 'bounds_lon_2d' are defined." << std::endl |
---|
1544 | << "Define only one longitude boundary attribute: 'bounds_lon_1d' or 'bounds_lon_2d'."); |
---|
1545 | |
---|
1546 | if (!bounds_lat_1d.isEmpty() && !bounds_lat_2d.isEmpty()) |
---|
1547 | ERROR("CDomain::checkBounds(void)", |
---|
1548 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1549 | << "Only one latitude boundary attribute can be used but both 'bounds_lat_1d' and 'bounds_lat_2d' are defined." << std::endl |
---|
1550 | << "Define only one latitude boundary attribute: 'bounds_lat_1d' or 'bounds_lat_2d'."); |
---|
1551 | |
---|
1552 | if ((!bounds_lon_1d.isEmpty() && bounds_lat_1d.isEmpty()) || (bounds_lon_1d.isEmpty() && !bounds_lat_1d.isEmpty())) |
---|
1553 | { |
---|
1554 | ERROR("CDomain::checkBounds(void)", |
---|
1555 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1556 | << "Only 'bounds_lon_1d' or 'bounds_lat_1d' is defined." << std::endl |
---|
1557 | << "Please define either both attributes or none."); |
---|
1558 | } |
---|
1559 | |
---|
1560 | if ((!bounds_lon_2d.isEmpty() && bounds_lat_2d.isEmpty()) || (bounds_lon_2d.isEmpty() && !bounds_lat_2d.isEmpty())) |
---|
1561 | { |
---|
1562 | ERROR("CDomain::checkBounds(void)", |
---|
1563 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1564 | << "Only 'bounds_lon_2d' or 'bounds_lat_2d' is defined." << std::endl |
---|
1565 | << "Please define either both attributes or none."); |
---|
1566 | } |
---|
1567 | |
---|
1568 | if (!bounds_lon_1d.isEmpty() && nvertex.getValue() != bounds_lon_1d.extent(0)) |
---|
1569 | ERROR("CDomain::checkBounds(void)", |
---|
1570 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1571 | << "'bounds_lon_1d' dimension is not compatible with 'nvertex'." << std::endl |
---|
1572 | << "'bounds_lon_1d' dimension is " << bounds_lon_1d.extent(0) |
---|
1573 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
1574 | |
---|
1575 | if (!bounds_lon_2d.isEmpty() && nvertex.getValue() != bounds_lon_2d.extent(0)) |
---|
1576 | ERROR("CDomain::checkBounds(void)", |
---|
1577 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1578 | << "'bounds_lon_2d' dimension is not compatible with 'nvertex'." << std::endl |
---|
1579 | << "'bounds_lon_2d' dimension is " << bounds_lon_2d.extent(0) |
---|
1580 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
1581 | |
---|
1582 | if (!bounds_lon_1d.isEmpty() && lonvalue_1d.isEmpty()) |
---|
1583 | ERROR("CDomain::checkBounds(void)", |
---|
1584 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1585 | << "Since 'bounds_lon_1d' is defined, 'lonvalue_1d' must be defined too." << std::endl); |
---|
1586 | |
---|
1587 | if (!bounds_lon_2d.isEmpty() && lonvalue_2d.isEmpty()) |
---|
1588 | ERROR("CDomain::checkBounds(void)", |
---|
1589 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1590 | << "Since 'bounds_lon_2d' is defined, 'lonvalue_2d' must be defined too." << std::endl); |
---|
1591 | |
---|
1592 | if (!bounds_lat_1d.isEmpty() && nvertex.getValue() != bounds_lat_1d.extent(0)) |
---|
1593 | ERROR("CDomain::checkBounds(void)", |
---|
1594 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1595 | << "'bounds_lat_1d' dimension is not compatible with 'nvertex'." << std::endl |
---|
1596 | << "'bounds_lat_1d' dimension is " << bounds_lat_1d.extent(0) |
---|
1597 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
1598 | |
---|
1599 | if (!bounds_lat_2d.isEmpty() && nvertex.getValue() != bounds_lat_2d.extent(0)) |
---|
1600 | ERROR("CDomain::checkBounds(void)", |
---|
1601 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1602 | << "'bounds_lat_2d' dimension is not compatible with 'nvertex'." << std::endl |
---|
1603 | << "'bounds_lat_2d' dimension is " << bounds_lat_2d.extent(0) |
---|
1604 | << " but nvertex is " << nvertex.getValue() << "."); |
---|
1605 | |
---|
1606 | if (!bounds_lat_1d.isEmpty() && latvalue_1d.isEmpty()) |
---|
1607 | ERROR("CDomain::checkBounds(void)", |
---|
1608 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1609 | << "Since 'bounds_lat_1d' is defined, 'latvalue_1d' must be defined too." << std::endl); |
---|
1610 | |
---|
1611 | if (!bounds_lat_2d.isEmpty() && latvalue_2d.isEmpty()) |
---|
1612 | ERROR("CDomain::checkBounds(void)", |
---|
1613 | << "Since 'bounds_lat_2d' is defined, 'latvalue_2d' must be defined too." << std::endl); |
---|
1614 | |
---|
1615 | // In case of reading UGRID bounds values are not required |
---|
1616 | hasBounds = (!bounds_lat_1d.isEmpty() || !bounds_lat_2d.isEmpty() ); |
---|
1617 | } |
---|
1618 | else if (hasBoundValues) |
---|
1619 | { |
---|
1620 | hasBounds = true; |
---|
1621 | } |
---|
1622 | else |
---|
1623 | { |
---|
1624 | hasBounds = false; |
---|
1625 | } |
---|
1626 | } |
---|
1627 | CATCH_DUMP_ATTR |
---|
1628 | |
---|
1629 | void CDomain::checkArea(void) |
---|
1630 | TRY |
---|
1631 | { |
---|
1632 | bool hasAreaValue = (!areavalue.isEmpty() && 0 != areavalue.numElements()); |
---|
1633 | hasArea = !area.isEmpty(); |
---|
1634 | if (hasArea && !hasAreaValue) |
---|
1635 | { |
---|
1636 | if (area.extent(0) != ni || area.extent(1) != nj) |
---|
1637 | { |
---|
1638 | ERROR("CDomain::checkArea(void)", |
---|
1639 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1640 | << "The area does not have the same size as the local domain." << std::endl |
---|
1641 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
1642 | << "Area size is " << area.extent(0) << " x " << area.extent(1) << "."); |
---|
1643 | } |
---|
1644 | // if (areavalue.isEmpty()) |
---|
1645 | // { |
---|
1646 | // areavalue.resize(ni*nj); |
---|
1647 | // for (int j = 0; j < nj; ++j) |
---|
1648 | // { |
---|
1649 | // for (int i = 0; i < ni; ++i) |
---|
1650 | // { |
---|
1651 | // int k = j * ni + i; |
---|
1652 | // areavalue(k) = area(i,j); |
---|
1653 | // } |
---|
1654 | // } |
---|
1655 | // } |
---|
1656 | } |
---|
1657 | } |
---|
1658 | CATCH_DUMP_ATTR |
---|
1659 | |
---|
1660 | void CDomain::checkLonLat() |
---|
1661 | TRY |
---|
1662 | { |
---|
1663 | if (!hasLonLat) hasLonLat = (!latvalue_1d.isEmpty() && !lonvalue_1d.isEmpty()) || |
---|
1664 | (!latvalue_2d.isEmpty() && !lonvalue_2d.isEmpty()); |
---|
1665 | bool hasLonLatValue = (0 != lonvalue.numElements()) || (0 != latvalue.numElements()); |
---|
1666 | if (hasLonLat && !hasLonLatValue) |
---|
1667 | { |
---|
1668 | if (!lonvalue_1d.isEmpty() && !lonvalue_2d.isEmpty()) |
---|
1669 | ERROR("CDomain::checkLonLat()", |
---|
1670 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1671 | << "Only one longitude attribute can be used but both 'lonvalue_1d' and 'lonvalue_2d' are defined." << std::endl |
---|
1672 | << "Define only one longitude attribute: 'lonvalue_1d' or 'lonvalue_2d'."); |
---|
1673 | |
---|
1674 | if (!lonvalue_1d.isEmpty() && lonvalue_2d.isEmpty()) |
---|
1675 | { |
---|
1676 | if ((type_attr::rectilinear != type) && (lonvalue_1d.numElements() != i_index.numElements())) |
---|
1677 | ERROR("CDomain::checkLonLat()", |
---|
1678 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1679 | << "'lonvalue_1d' does not have the same size as the local domain." << std::endl |
---|
1680 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
1681 | << "'lonvalue_1d' size is " << lonvalue_1d.numElements() << "."); |
---|
1682 | } |
---|
1683 | |
---|
1684 | if (lonvalue_1d.isEmpty() && !lonvalue_2d.isEmpty()) |
---|
1685 | { |
---|
1686 | if (lonvalue_2d.extent(0) != ni || lonvalue_2d.extent(1) != nj) |
---|
1687 | ERROR("CDomain::checkLonLat()", |
---|
1688 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1689 | << "'lonvalue_2d' does not have the same size as the local domain." << std::endl |
---|
1690 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
1691 | << "'lonvalue_2d' size is " << lonvalue_2d.extent(0) << " x " << lonvalue_2d.extent(1) << "."); |
---|
1692 | } |
---|
1693 | |
---|
1694 | if (!latvalue_1d.isEmpty() && !latvalue_2d.isEmpty()) |
---|
1695 | ERROR("CDomain::checkLonLat()", |
---|
1696 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1697 | << "Only one latitude attribute can be used but both 'latvalue_1d' and 'latvalue_2d' are defined." << std::endl |
---|
1698 | << "Define only one latitude attribute: 'latvalue_1d' or 'latvalue_2d'."); |
---|
1699 | |
---|
1700 | if (!latvalue_1d.isEmpty() && latvalue_2d.isEmpty()) |
---|
1701 | { |
---|
1702 | if ((type_attr::rectilinear != type) && (latvalue_1d.numElements() != i_index.numElements())) |
---|
1703 | ERROR("CDomain::checkLonLat()", |
---|
1704 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1705 | << "'latvalue_1d' does not have the same size as the local domain." << std::endl |
---|
1706 | << "Local size is " << i_index.numElements() << "." << std::endl |
---|
1707 | << "'latvalue_1d' size is " << latvalue_1d.numElements() << "."); |
---|
1708 | } |
---|
1709 | |
---|
1710 | if (latvalue_1d.isEmpty() && !latvalue_2d.isEmpty()) |
---|
1711 | { |
---|
1712 | if (latvalue_2d.extent(0) != ni || latvalue_2d.extent(1) != nj) |
---|
1713 | ERROR("CDomain::checkLonLat()", |
---|
1714 | << "[ id = " << this->getId() << " , context = '" << CObjectFactory::GetCurrentContextId() << " ] " |
---|
1715 | << "'latvalue_2d' does not have the same size as the local domain." << std::endl |
---|
1716 | << "Local size is " << ni.getValue() << " x " << nj.getValue() << "." << std::endl |
---|
1717 | << "'latvalue_2d' size is " << latvalue_2d.extent(0) << " x " << latvalue_2d.extent(1) << "."); |
---|
1718 | } |
---|
1719 | } |
---|
1720 | } |
---|
1721 | CATCH_DUMP_ATTR |
---|
1722 | |
---|
1723 | void CDomain::checkAttributesOnClientAfterTransformation() |
---|
1724 | TRY |
---|
1725 | { |
---|
1726 | CContext* context=CContext::getCurrent() ; |
---|
1727 | |
---|
1728 | if (this->isClientAfterTransformationChecked) return; |
---|
1729 | if (context->hasClient) |
---|
1730 | { |
---|
1731 | this->computeConnectedClients(); |
---|
1732 | if (hasLonLat) |
---|
1733 | if (!context->hasServer) |
---|
1734 | this->completeLonLatClient(); |
---|
1735 | } |
---|
1736 | |
---|
1737 | this->isClientAfterTransformationChecked = true; |
---|
1738 | } |
---|
1739 | CATCH_DUMP_ATTR |
---|
1740 | |
---|
1741 | //---------------------------------------------------------------- |
---|
1742 | // Divide function checkAttributes into 2 seperate ones |
---|
1743 | // This function only checks all attributes of current domain |
---|
1744 | void CDomain::checkAttributesOnClient() |
---|
1745 | TRY |
---|
1746 | { |
---|
1747 | if (this->isClientChecked) return; |
---|
1748 | CContext* context=CContext::getCurrent(); |
---|
1749 | |
---|
1750 | if (context->hasClient && !context->hasServer) |
---|
1751 | { |
---|
1752 | this->checkDomain(); |
---|
1753 | this->checkBounds(); |
---|
1754 | this->checkArea(); |
---|
1755 | this->checkLonLat(); |
---|
1756 | } |
---|
1757 | |
---|
1758 | if (context->hasClient && !context->hasServer) |
---|
1759 | { // Ct client uniquement |
---|
1760 | this->checkMask(); |
---|
1761 | this->checkDomainData(); |
---|
1762 | this->checkCompression(); |
---|
1763 | this->computeLocalMask() ; |
---|
1764 | } |
---|
1765 | else |
---|
1766 | { // Ct serveur uniquement |
---|
1767 | } |
---|
1768 | |
---|
1769 | this->isClientChecked = true; |
---|
1770 | } |
---|
1771 | CATCH_DUMP_ATTR |
---|
1772 | |
---|
1773 | // Send all checked attributes to server |
---|
1774 | void CDomain::sendCheckedAttributes() |
---|
1775 | TRY |
---|
1776 | { |
---|
1777 | if (!this->isClientChecked) checkAttributesOnClient(); |
---|
1778 | if (!this->isClientAfterTransformationChecked) checkAttributesOnClientAfterTransformation(); |
---|
1779 | CContext* context=CContext::getCurrent() ; |
---|
1780 | |
---|
1781 | if (this->isChecked) return; |
---|
1782 | if (context->hasClient) |
---|
1783 | { |
---|
1784 | sendAttributes(); |
---|
1785 | } |
---|
1786 | this->isChecked = true; |
---|
1787 | } |
---|
1788 | CATCH_DUMP_ATTR |
---|
1789 | |
---|
1790 | void CDomain::checkAttributes(void) |
---|
1791 | TRY |
---|
1792 | { |
---|
1793 | if (this->isChecked) return; |
---|
1794 | CContext* context=CContext::getCurrent() ; |
---|
1795 | |
---|
1796 | this->checkDomain(); |
---|
1797 | this->checkLonLat(); |
---|
1798 | this->checkBounds(); |
---|
1799 | this->checkArea(); |
---|
1800 | |
---|
1801 | if (context->hasClient) |
---|
1802 | { // Ct client uniquement |
---|
1803 | this->checkMask(); |
---|
1804 | this->checkDomainData(); |
---|
1805 | this->checkCompression(); |
---|
1806 | this->computeLocalMask() ; |
---|
1807 | |
---|
1808 | } |
---|
1809 | else |
---|
1810 | { // Ct serveur uniquement |
---|
1811 | } |
---|
1812 | |
---|
1813 | if (context->hasClient) |
---|
1814 | { |
---|
1815 | this->computeConnectedClients(); |
---|
1816 | this->completeLonLatClient(); |
---|
1817 | } |
---|
1818 | |
---|
1819 | this->isChecked = true; |
---|
1820 | } |
---|
1821 | CATCH_DUMP_ATTR |
---|
1822 | |
---|
1823 | /*! |
---|
1824 | Compute the connection of a client to other clients to determine which clients to send attributes to. |
---|
1825 | The sending clients are supposed to already know the distribution of receiving clients (In simple cases, it's band) |
---|
1826 | The connection among clients is calculated by using global index. |
---|
1827 | A client connects to other clients which holds the same global index as it. |
---|
1828 | */ |
---|
1829 | void CDomain::computeConnectedClients() |
---|
1830 | TRY |
---|
1831 | { |
---|
1832 | CContext* context=CContext::getCurrent() ; |
---|
1833 | |
---|
1834 | // This line should be changed soon. |
---|
1835 | int nbSrvPools = (context->hasServer) ? (context->hasClient ? context->clientPrimServer.size() : 0) : 1; |
---|
1836 | |
---|
1837 | nbSenders.clear(); |
---|
1838 | connectedServerRank_.clear(); |
---|
1839 | |
---|
1840 | for (int p = 0; p < nbSrvPools; ++p) |
---|
1841 | { |
---|
1842 | CContextClient* client = (0 != context->clientPrimServer.size()) ? context->clientPrimServer[p] : context->client; |
---|
1843 | int nbServer = client->serverSize; |
---|
1844 | int nbClient = client->clientSize; |
---|
1845 | int rank = client->clientRank; |
---|
1846 | bool doComputeGlobalIndexServer = true; |
---|
1847 | |
---|
1848 | if (connectedServerRank_.find(nbServer) == connectedServerRank_.end()) |
---|
1849 | { |
---|
1850 | |
---|
1851 | if (indSrv_.find(nbServer) == indSrv_.end()) |
---|
1852 | { |
---|
1853 | int i,j,i_ind,j_ind, nbIndex=i_index.numElements(); |
---|
1854 | int globalIndexCount = i_index.numElements(); |
---|
1855 | // Fill in index |
---|
1856 | CArray<size_t,1> globalIndexDomain(nbIndex); |
---|
1857 | size_t globalIndex; |
---|
1858 | |
---|
1859 | for (i = 0; i < nbIndex; ++i) |
---|
1860 | { |
---|
1861 | i_ind=i_index(i); |
---|
1862 | j_ind=j_index(i); |
---|
1863 | globalIndex = i_ind + j_ind * ni_glo; |
---|
1864 | globalIndexDomain(i) = globalIndex; |
---|
1865 | } |
---|
1866 | |
---|
1867 | if (globalLocalIndexMap_.empty()) |
---|
1868 | { |
---|
1869 | for (i = 0; i < nbIndex; ++i) |
---|
1870 | globalLocalIndexMap_[globalIndexDomain(i)] = i; |
---|
1871 | } |
---|
1872 | |
---|
1873 | size_t globalSizeIndex = 1, indexBegin, indexEnd; |
---|
1874 | int range, clientSize = client->clientSize; |
---|
1875 | std::vector<int> nGlobDomain(2); |
---|
1876 | nGlobDomain[0] = this->ni_glo; |
---|
1877 | nGlobDomain[1] = this->nj_glo; |
---|
1878 | for (int i = 0; i < nGlobDomain.size(); ++i) globalSizeIndex *= nGlobDomain[i]; |
---|
1879 | indexBegin = 0; |
---|
1880 | if (globalSizeIndex <= clientSize) |
---|
1881 | { |
---|
1882 | indexBegin = rank%globalSizeIndex; |
---|
1883 | indexEnd = indexBegin; |
---|
1884 | } |
---|
1885 | else |
---|
1886 | { |
---|
1887 | for (int i = 0; i < clientSize; ++i) |
---|
1888 | { |
---|
1889 | range = globalSizeIndex / clientSize; |
---|
1890 | if (i < (globalSizeIndex%clientSize)) ++range; |
---|
1891 | if (i == client->clientRank) break; |
---|
1892 | indexBegin += range; |
---|
1893 | } |
---|
1894 | indexEnd = indexBegin + range - 1; |
---|
1895 | } |
---|
1896 | |
---|
1897 | // Even if servers have no index, they must received something from client |
---|
1898 | // We only use several client to send "empty" message to these servers |
---|
1899 | CServerDistributionDescription serverDescription(nGlobDomain, nbServer); |
---|
1900 | std::vector<int> serverZeroIndex; |
---|
1901 | if (isUnstructed_) serverZeroIndex = serverDescription.computeServerGlobalIndexInRange(std::make_pair<size_t&,size_t&>(indexBegin, indexEnd), 0); |
---|
1902 | else serverZeroIndex = serverDescription.computeServerGlobalIndexInRange(std::make_pair<size_t&,size_t&>(indexBegin, indexEnd), 1); |
---|
1903 | |
---|
1904 | std::list<int> serverZeroIndexLeader; |
---|
1905 | std::list<int> serverZeroIndexNotLeader; |
---|
1906 | CContextClient::computeLeader(client->clientRank, client->clientSize, serverZeroIndex.size(), serverZeroIndexLeader, serverZeroIndexNotLeader); |
---|
1907 | for (std::list<int>::iterator it = serverZeroIndexLeader.begin(); it != serverZeroIndexLeader.end(); ++it) |
---|
1908 | *it = serverZeroIndex[*it]; |
---|
1909 | |
---|
1910 | CClientServerMapping* clientServerMap = new CClientServerMappingDistributed(serverDescription.getGlobalIndexRange(), client->intraComm); |
---|
1911 | clientServerMap->computeServerIndexMapping(globalIndexDomain, nbServer); |
---|
1912 | CClientServerMapping::GlobalIndexMap& globalIndexDomainOnServer = clientServerMap->getGlobalIndexOnServer(); |
---|
1913 | |
---|
1914 | CClientServerMapping::GlobalIndexMap::const_iterator it = globalIndexDomainOnServer.begin(), |
---|
1915 | ite = globalIndexDomainOnServer.end(); |
---|
1916 | indSrv_[nbServer].swap(globalIndexDomainOnServer); |
---|
1917 | connectedServerRank_[nbServer].clear(); |
---|
1918 | for (it = indSrv_[nbServer].begin(); it != ite; ++it) |
---|
1919 | connectedServerRank_[nbServer].push_back(it->first); |
---|
1920 | |
---|
1921 | for (std::list<int>::const_iterator it = serverZeroIndexLeader.begin(); it != serverZeroIndexLeader.end(); ++it) |
---|
1922 | connectedServerRank_[nbServer].push_back(*it); |
---|
1923 | |
---|
1924 | // Even if a client has no index, it must connect to at least one server and |
---|
1925 | // send an "empty" data to this server |
---|
1926 | if (connectedServerRank_[nbServer].empty()) |
---|
1927 | connectedServerRank_[nbServer].push_back(client->clientRank % client->serverSize); |
---|
1928 | |
---|
1929 | // Now check if all servers have data to receive. If not, master client will send empty data. |
---|
1930 | // This ensures that all servers will participate in collective calls upon receiving even if they have no date to receive. |
---|
1931 | std::vector<int> counts (clientSize); |
---|
1932 | std::vector<int> displs (clientSize); |
---|
1933 | displs[0] = 0; |
---|
1934 | int localCount = connectedServerRank_[nbServer].size() ; |
---|
1935 | MPI_Gather(&localCount, 1, MPI_INT, &counts[0], 1, MPI_INT, 0, client->intraComm) ; |
---|
1936 | for (int i = 0; i < clientSize-1; ++i) |
---|
1937 | { |
---|
1938 | displs[i+1] = displs[i] + counts[i]; |
---|
1939 | } |
---|
1940 | std::vector<int> allConnectedServers(displs[clientSize-1]+counts[clientSize-1]); |
---|
1941 | MPI_Gatherv(&(connectedServerRank_[nbServer])[0], localCount, MPI_INT, &allConnectedServers[0], &counts[0], &displs[0], MPI_INT, 0, client->intraComm); |
---|
1942 | |
---|
1943 | if ((allConnectedServers.size() != nbServer) && (rank == 0)) |
---|
1944 | { |
---|
1945 | std::vector<bool> isSrvConnected (nbServer, false); |
---|
1946 | for (int i = 0; i < allConnectedServers.size(); ++i) isSrvConnected[allConnectedServers[i]] = true; |
---|
1947 | for (int i = 0; i < nbServer; ++i) |
---|
1948 | { |
---|
1949 | if (!isSrvConnected[i]) connectedServerRank_[nbServer].push_back(i); |
---|
1950 | } |
---|
1951 | } |
---|
1952 | nbSenders[nbServer] = clientServerMap->computeConnectedClients(client->serverSize, client->clientSize, client->intraComm, connectedServerRank_[nbServer]); |
---|
1953 | delete clientServerMap; |
---|
1954 | } |
---|
1955 | } |
---|
1956 | } |
---|
1957 | } |
---|
1958 | CATCH_DUMP_ATTR |
---|
1959 | |
---|
1960 | /*! |
---|
1961 | Compute index to write data. We only write data on the zoomed region, therefore, there should |
---|
1962 | be a map between the complete grid and the reduced grid where we write data. |
---|
1963 | By using global index we can easily create this kind of mapping. |
---|
1964 | */ |
---|
1965 | void CDomain::computeWrittenIndex() |
---|
1966 | TRY |
---|
1967 | { |
---|
1968 | if (computedWrittenIndex_) return; |
---|
1969 | computedWrittenIndex_ = true; |
---|
1970 | |
---|
1971 | CContext* context=CContext::getCurrent(); |
---|
1972 | CContextServer* server = context->server; |
---|
1973 | |
---|
1974 | std::vector<int> nBegin(2), nSize(2), nBeginGlobal(2), nGlob(2); |
---|
1975 | nBegin[0] = ibegin; nBegin[1] = jbegin; |
---|
1976 | nSize[0] = ni; nSize[1] = nj; |
---|
1977 | nBeginGlobal[0] = 0; nBeginGlobal[1] = 0; |
---|
1978 | nGlob[0] = ni_glo; nGlob[1] = nj_glo; |
---|
1979 | CDistributionServer srvDist(server->intraCommSize, nBegin, nSize, nBeginGlobal, nGlob); |
---|
1980 | const CArray<size_t,1>& writtenGlobalIndex = srvDist.getGlobalIndex(); |
---|
1981 | |
---|
1982 | size_t nbWritten = 0, indGlo; |
---|
1983 | std::unordered_map<size_t,size_t>::const_iterator itb = globalLocalIndexMap_.begin(), |
---|
1984 | ite = globalLocalIndexMap_.end(), it; |
---|
1985 | CArray<size_t,1>::const_iterator itSrvb = writtenGlobalIndex.begin(), |
---|
1986 | itSrve = writtenGlobalIndex.end(), itSrv; |
---|
1987 | |
---|
1988 | localIndexToWriteOnServer.resize(writtenGlobalIndex.numElements()); |
---|
1989 | nbWritten = 0; |
---|
1990 | for (itSrv = itSrvb; itSrv != itSrve; ++itSrv) |
---|
1991 | { |
---|
1992 | indGlo = *itSrv; |
---|
1993 | if (ite != globalLocalIndexMap_.find(indGlo)) |
---|
1994 | { |
---|
1995 | localIndexToWriteOnServer(nbWritten) = globalLocalIndexMap_[indGlo]; |
---|
1996 | } |
---|
1997 | else |
---|
1998 | { |
---|
1999 | localIndexToWriteOnServer(nbWritten) = -1; |
---|
2000 | } |
---|
2001 | ++nbWritten; |
---|
2002 | } |
---|
2003 | } |
---|
2004 | CATCH_DUMP_ATTR |
---|
2005 | |
---|
2006 | void CDomain::computeWrittenCompressedIndex(MPI_Comm writtenComm) |
---|
2007 | TRY |
---|
2008 | { |
---|
2009 | int writtenCommSize; |
---|
2010 | MPI_Comm_size(writtenComm, &writtenCommSize); |
---|
2011 | if (compressedIndexToWriteOnServer.find(writtenCommSize) != compressedIndexToWriteOnServer.end()) |
---|
2012 | return; |
---|
2013 | |
---|
2014 | if (isCompressible()) |
---|
2015 | { |
---|
2016 | size_t nbWritten = 0, indGlo; |
---|
2017 | CContext* context=CContext::getCurrent(); |
---|
2018 | CContextServer* server = context->server; |
---|
2019 | |
---|
2020 | std::vector<int> nBegin(2), nSize(2), nBeginGlobal(2), nGlob(2); |
---|
2021 | nBegin[0] = ibegin; nBegin[1] = jbegin; |
---|
2022 | nSize[0] = ni; nSize[1] = nj; |
---|
2023 | nBeginGlobal[0] = 0; nBeginGlobal[1] = 0; |
---|
2024 | nGlob[0] = ni_glo; nGlob[1] = nj_glo; |
---|
2025 | CDistributionServer srvDist(server->intraCommSize, nBegin, nSize, nBeginGlobal, nGlob); |
---|
2026 | const CArray<size_t,1>& writtenGlobalIndex = srvDist.getGlobalIndex(); |
---|
2027 | |
---|
2028 | std::unordered_map<size_t,size_t>::const_iterator itb = globalLocalIndexMap_.begin(), |
---|
2029 | ite = globalLocalIndexMap_.end(), it; |
---|
2030 | CArray<size_t,1>::const_iterator itSrvb = writtenGlobalIndex.begin(), |
---|
2031 | itSrve = writtenGlobalIndex.end(), itSrv; |
---|
2032 | std::unordered_map<size_t,size_t> localGlobalIndexMap; |
---|
2033 | for (itSrv = itSrvb; itSrv != itSrve; ++itSrv) |
---|
2034 | { |
---|
2035 | indGlo = *itSrv; |
---|
2036 | if (ite != globalLocalIndexMap_.find(indGlo)) |
---|
2037 | { |
---|
2038 | localGlobalIndexMap[localIndexToWriteOnServer(nbWritten)] = indGlo; |
---|
2039 | ++nbWritten; |
---|
2040 | } |
---|
2041 | } |
---|
2042 | |
---|
2043 | nbWritten = 0; |
---|
2044 | for (int idx = 0; idx < data_i_index.numElements(); ++idx) |
---|
2045 | { |
---|
2046 | if (localGlobalIndexMap.end() != localGlobalIndexMap.find(data_i_index(idx))) |
---|
2047 | { |
---|
2048 | ++nbWritten; |
---|
2049 | } |
---|
2050 | } |
---|
2051 | |
---|
2052 | compressedIndexToWriteOnServer[writtenCommSize].resize(nbWritten); |
---|
2053 | nbWritten = 0; |
---|
2054 | for (int idx = 0; idx < data_i_index.numElements(); ++idx) |
---|
2055 | { |
---|
2056 | if (localGlobalIndexMap.end() != localGlobalIndexMap.find(data_i_index(idx))) |
---|
2057 | { |
---|
2058 | compressedIndexToWriteOnServer[writtenCommSize](nbWritten) = localGlobalIndexMap[data_i_index(idx)]; |
---|
2059 | ++nbWritten; |
---|
2060 | } |
---|
2061 | } |
---|
2062 | |
---|
2063 | numberWrittenIndexes_[writtenCommSize] = nbWritten; |
---|
2064 | bool distributed_glo, distributed=isDistributed() ; |
---|
2065 | MPI_Allreduce(&distributed,&distributed_glo, 1, MPI_INT, MPI_LOR, writtenComm) ; |
---|
2066 | |
---|
2067 | if (distributed_glo) |
---|
2068 | { |
---|
2069 | |
---|
2070 | MPI_Allreduce(&numberWrittenIndexes_[writtenCommSize], &totalNumberWrittenIndexes_[writtenCommSize], 1, MPI_INT, MPI_SUM, writtenComm); |
---|
2071 | MPI_Scan(&numberWrittenIndexes_[writtenCommSize], &offsetWrittenIndexes_[writtenCommSize], 1, MPI_INT, MPI_SUM, writtenComm); |
---|
2072 | offsetWrittenIndexes_[writtenCommSize] -= numberWrittenIndexes_[writtenCommSize]; |
---|
2073 | } |
---|
2074 | else |
---|
2075 | totalNumberWrittenIndexes_[writtenCommSize] = numberWrittenIndexes_[writtenCommSize]; |
---|
2076 | } |
---|
2077 | } |
---|
2078 | CATCH_DUMP_ATTR |
---|
2079 | |
---|
2080 | /*! |
---|
2081 | Send all attributes from client to connected clients |
---|
2082 | The attributes will be rebuilt on receiving side |
---|
2083 | */ |
---|
2084 | void CDomain::sendAttributes() |
---|
2085 | TRY |
---|
2086 | { |
---|
2087 | sendDistributionAttributes(); |
---|
2088 | sendIndex(); |
---|
2089 | sendLonLat(); |
---|
2090 | sendArea(); |
---|
2091 | sendDataIndex(); |
---|
2092 | } |
---|
2093 | CATCH |
---|
2094 | /*! |
---|
2095 | Send global index from client to connected client(s) |
---|
2096 | */ |
---|
2097 | void CDomain::sendIndex() |
---|
2098 | TRY |
---|
2099 | { |
---|
2100 | int ns, n, i, j, ind, nv, idx; |
---|
2101 | std::list<CContextClient*>::iterator it; |
---|
2102 | for (it=clients.begin(); it!=clients.end(); ++it) |
---|
2103 | { |
---|
2104 | CContextClient* client = *it; |
---|
2105 | |
---|
2106 | int serverSize = client->serverSize; |
---|
2107 | CEventClient eventIndex(getType(), EVENT_ID_INDEX); |
---|
2108 | |
---|
2109 | list<CMessage> list_msgsIndex; |
---|
2110 | list<CArray<int,1> > list_indGlob; |
---|
2111 | |
---|
2112 | std::unordered_map<int, vector<size_t> >::const_iterator itIndex, iteIndex; |
---|
2113 | iteIndex = indSrv_[serverSize].end(); |
---|
2114 | for (int k = 0; k < connectedServerRank_[serverSize].size(); ++k) |
---|
2115 | { |
---|
2116 | int nbIndGlob = 0; |
---|
2117 | int rank = connectedServerRank_[serverSize][k]; |
---|
2118 | itIndex = indSrv_[serverSize].find(rank); |
---|
2119 | if (iteIndex != itIndex) |
---|
2120 | nbIndGlob = itIndex->second.size(); |
---|
2121 | |
---|
2122 | list_indGlob.push_back(CArray<int,1>(nbIndGlob)); |
---|
2123 | |
---|
2124 | CArray<int,1>& indGlob = list_indGlob.back(); |
---|
2125 | for (n = 0; n < nbIndGlob; ++n) |
---|
2126 | { |
---|
2127 | indGlob(n) = static_cast<int>(itIndex->second[n]); |
---|
2128 | } |
---|
2129 | |
---|
2130 | list_msgsIndex.push_back(CMessage()); |
---|
2131 | list_msgsIndex.back() << this->getId() << (int)type; // enum ne fonctionne pour les message => ToFix |
---|
2132 | list_msgsIndex.back() << isCurvilinear; |
---|
2133 | list_msgsIndex.back() << list_indGlob.back(); //list_indi.back() << list_indj.back(); |
---|
2134 | |
---|
2135 | eventIndex.push(rank, nbSenders[serverSize][rank], list_msgsIndex.back()); |
---|
2136 | } |
---|
2137 | |
---|
2138 | client->sendEvent(eventIndex); |
---|
2139 | } |
---|
2140 | } |
---|
2141 | CATCH_DUMP_ATTR |
---|
2142 | |
---|
2143 | /*! |
---|
2144 | Send distribution from client to other clients |
---|
2145 | Because a client in a level knows correctly the grid distribution of client on the next level |
---|
2146 | it calculates this distribution then sends it to the corresponding clients on the next level |
---|
2147 | */ |
---|
2148 | void CDomain::sendDistributionAttributes(void) |
---|
2149 | TRY |
---|
2150 | { |
---|
2151 | std::list<CContextClient*>::iterator it; |
---|
2152 | for (it=clients.begin(); it!=clients.end(); ++it) |
---|
2153 | { |
---|
2154 | CContextClient* client = *it; |
---|
2155 | int nbServer = client->serverSize; |
---|
2156 | std::vector<int> nGlobDomain(2); |
---|
2157 | nGlobDomain[0] = this->ni_glo; |
---|
2158 | nGlobDomain[1] = this->nj_glo; |
---|
2159 | |
---|
2160 | CServerDistributionDescription serverDescription(nGlobDomain, nbServer); |
---|
2161 | if (isUnstructed_) serverDescription.computeServerDistribution(false, 0); |
---|
2162 | else serverDescription.computeServerDistribution(false, 1); |
---|
2163 | |
---|
2164 | std::vector<std::vector<int> > serverIndexBegin = serverDescription.getServerIndexBegin(); |
---|
2165 | std::vector<std::vector<int> > serverDimensionSizes = serverDescription.getServerDimensionSizes(); |
---|
2166 | |
---|
2167 | CEventClient event(getType(),EVENT_ID_SERVER_ATTRIBUT); |
---|
2168 | if (client->isServerLeader()) |
---|
2169 | { |
---|
2170 | std::list<CMessage> msgs; |
---|
2171 | |
---|
2172 | const std::list<int>& ranks = client->getRanksServerLeader(); |
---|
2173 | for (std::list<int>::const_iterator itRank = ranks.begin(), itRankEnd = ranks.end(); itRank != itRankEnd; ++itRank) |
---|
2174 | { |
---|
2175 | // Use const int to ensure CMessage holds a copy of the value instead of just a reference |
---|
2176 | const int ibegin_srv = serverIndexBegin[*itRank][0]; |
---|
2177 | const int jbegin_srv = serverIndexBegin[*itRank][1]; |
---|
2178 | const int ni_srv = serverDimensionSizes[*itRank][0]; |
---|
2179 | const int nj_srv = serverDimensionSizes[*itRank][1]; |
---|
2180 | |
---|
2181 | msgs.push_back(CMessage()); |
---|
2182 | CMessage& msg = msgs.back(); |
---|
2183 | msg << this->getId() ; |
---|
2184 | msg << isUnstructed_; |
---|
2185 | msg << ni_srv << ibegin_srv << nj_srv << jbegin_srv; |
---|
2186 | msg << ni_glo.getValue() << nj_glo.getValue(); |
---|
2187 | msg << isCompressible_; |
---|
2188 | |
---|
2189 | event.push(*itRank,1,msg); |
---|
2190 | } |
---|
2191 | client->sendEvent(event); |
---|
2192 | } |
---|
2193 | else client->sendEvent(event); |
---|
2194 | } |
---|
2195 | } |
---|
2196 | CATCH_DUMP_ATTR |
---|
2197 | |
---|
2198 | /*! |
---|
2199 | Send area from client to connected client(s) |
---|
2200 | */ |
---|
2201 | void CDomain::sendArea() |
---|
2202 | TRY |
---|
2203 | { |
---|
2204 | if (!hasArea) return; |
---|
2205 | |
---|
2206 | int ns, n, i, j, ind, nv, idx; |
---|
2207 | std::list<CContextClient*>::iterator it; |
---|
2208 | |
---|
2209 | for (it=clients.begin(); it!=clients.end(); ++it) |
---|
2210 | { |
---|
2211 | CContextClient* client = *it; |
---|
2212 | int serverSize = client->serverSize; |
---|
2213 | |
---|
2214 | // send area for each connected server |
---|
2215 | CEventClient eventArea(getType(), EVENT_ID_AREA); |
---|
2216 | |
---|
2217 | list<CMessage> list_msgsArea; |
---|
2218 | list<CArray<double,1> > list_area; |
---|
2219 | |
---|
2220 | std::unordered_map<int, vector<size_t> >::const_iterator it, iteMap; |
---|
2221 | iteMap = indSrv_[serverSize].end(); |
---|
2222 | for (int k = 0; k < connectedServerRank_[serverSize].size(); ++k) |
---|
2223 | { |
---|
2224 | int nbData = 0; |
---|
2225 | int rank = connectedServerRank_[serverSize][k]; |
---|
2226 | it = indSrv_[serverSize].find(rank); |
---|
2227 | if (iteMap != it) |
---|
2228 | nbData = it->second.size(); |
---|
2229 | list_area.push_back(CArray<double,1>(nbData)); |
---|
2230 | |
---|
2231 | const std::vector<size_t>& temp = it->second; |
---|
2232 | for (n = 0; n < nbData; ++n) |
---|
2233 | { |
---|
2234 | idx = static_cast<int>(it->second[n]); |
---|
2235 | list_area.back()(n) = areavalue(globalLocalIndexMap_[idx]); |
---|
2236 | } |
---|
2237 | |
---|
2238 | list_msgsArea.push_back(CMessage()); |
---|
2239 | list_msgsArea.back() << this->getId() << hasArea; |
---|
2240 | list_msgsArea.back() << list_area.back(); |
---|
2241 | eventArea.push(rank, nbSenders[serverSize][rank], list_msgsArea.back()); |
---|
2242 | } |
---|
2243 | client->sendEvent(eventArea); |
---|
2244 | } |
---|
2245 | } |
---|
2246 | CATCH_DUMP_ATTR |
---|
2247 | |
---|
2248 | /*! |
---|
2249 | Send longitude and latitude from client to servers |
---|
2250 | Each client send long and lat information to corresponding connected clients(s). |
---|
2251 | Because longitude and latitude are optional, this function only called if latitude and longitude exist |
---|
2252 | */ |
---|
2253 | void CDomain::sendLonLat() |
---|
2254 | TRY |
---|
2255 | { |
---|
2256 | if (!hasLonLat) return; |
---|
2257 | |
---|
2258 | int ns, n, i, j, ind, nv, idx; |
---|
2259 | std::list<CContextClient*>::iterator it; |
---|
2260 | for (it=clients.begin(); it!=clients.end(); ++it) |
---|
2261 | { |
---|
2262 | CContextClient* client = *it; |
---|
2263 | int serverSize = client->serverSize; |
---|
2264 | |
---|
2265 | // send lon lat for each connected server |
---|
2266 | CEventClient eventLon(getType(), EVENT_ID_LON); |
---|
2267 | CEventClient eventLat(getType(), EVENT_ID_LAT); |
---|
2268 | |
---|
2269 | list<CMessage> list_msgsLon, list_msgsLat; |
---|
2270 | list<CArray<double,1> > list_lon, list_lat; |
---|
2271 | list<CArray<double,2> > list_boundslon, list_boundslat; |
---|
2272 | |
---|
2273 | std::unordered_map<int, vector<size_t> >::const_iterator it, iteMap; |
---|
2274 | iteMap = indSrv_[serverSize].end(); |
---|
2275 | for (int k = 0; k < connectedServerRank_[serverSize].size(); ++k) |
---|
2276 | { |
---|
2277 | int nbData = 0; |
---|
2278 | int rank = connectedServerRank_[serverSize][k]; |
---|
2279 | it = indSrv_[serverSize].find(rank); |
---|
2280 | if (iteMap != it) |
---|
2281 | nbData = it->second.size(); |
---|
2282 | |
---|
2283 | list_lon.push_back(CArray<double,1>(nbData)); |
---|
2284 | list_lat.push_back(CArray<double,1>(nbData)); |
---|
2285 | |
---|
2286 | if (hasBounds) |
---|
2287 | { |
---|
2288 | list_boundslon.push_back(CArray<double,2>(nvertex, nbData)); |
---|
2289 | list_boundslat.push_back(CArray<double,2>(nvertex, nbData)); |
---|
2290 | } |
---|
2291 | |
---|
2292 | CArray<double,1>& lon = list_lon.back(); |
---|
2293 | CArray<double,1>& lat = list_lat.back(); |
---|
2294 | const std::vector<size_t>& temp = it->second; |
---|
2295 | for (n = 0; n < nbData; ++n) |
---|
2296 | { |
---|
2297 | idx = static_cast<int>(it->second[n]); |
---|
2298 | int localInd = globalLocalIndexMap_[idx]; |
---|
2299 | lon(n) = lonvalue(localInd); |
---|
2300 | lat(n) = latvalue(localInd); |
---|
2301 | |
---|
2302 | if (hasBounds) |
---|
2303 | { |
---|
2304 | CArray<double,2>& boundslon = list_boundslon.back(); |
---|
2305 | CArray<double,2>& boundslat = list_boundslat.back(); |
---|
2306 | |
---|
2307 | for (nv = 0; nv < nvertex; ++nv) |
---|
2308 | { |
---|
2309 | boundslon(nv, n) = bounds_lonvalue(nv, localInd); |
---|
2310 | boundslat(nv, n) = bounds_latvalue(nv, localInd); |
---|
2311 | } |
---|
2312 | } |
---|
2313 | } |
---|
2314 | |
---|
2315 | list_msgsLon.push_back(CMessage()); |
---|
2316 | list_msgsLat.push_back(CMessage()); |
---|
2317 | |
---|
2318 | list_msgsLon.back() << this->getId() << hasLonLat; |
---|
2319 | if (hasLonLat) |
---|
2320 | list_msgsLon.back() << list_lon.back(); |
---|
2321 | list_msgsLon.back() << hasBounds; |
---|
2322 | if (hasBounds) |
---|
2323 | { |
---|
2324 | list_msgsLon.back() << list_boundslon.back(); |
---|
2325 | } |
---|
2326 | |
---|
2327 | list_msgsLat.back() << this->getId() << hasLonLat; |
---|
2328 | if (hasLonLat) |
---|
2329 | list_msgsLat.back() << list_lat.back(); |
---|
2330 | list_msgsLat.back() << hasBounds; |
---|
2331 | if (hasBounds) |
---|
2332 | { |
---|
2333 | list_msgsLat.back() << list_boundslat.back(); |
---|
2334 | } |
---|
2335 | |
---|
2336 | eventLon.push(rank, nbSenders[serverSize][rank], list_msgsLon.back()); |
---|
2337 | eventLat.push(rank, nbSenders[serverSize][rank], list_msgsLat.back()); |
---|
2338 | } |
---|
2339 | client->sendEvent(eventLon); |
---|
2340 | client->sendEvent(eventLat); |
---|
2341 | } |
---|
2342 | } |
---|
2343 | CATCH_DUMP_ATTR |
---|
2344 | |
---|
2345 | /*! |
---|
2346 | Send data index to corresponding connected clients. |
---|
2347 | Data index can be compressed however, we always send decompressed data index |
---|
2348 | and they will be compressed on receiving. |
---|
2349 | The compressed index are represented with 1 and others are represented with -1 |
---|
2350 | */ |
---|
2351 | void CDomain::sendDataIndex() |
---|
2352 | TRY |
---|
2353 | { |
---|
2354 | int ns, n, i, j, ind, nv, idx; |
---|
2355 | std::list<CContextClient*>::iterator it; |
---|
2356 | for (it=clients.begin(); it!=clients.end(); ++it) |
---|
2357 | { |
---|
2358 | CContextClient* client = *it; |
---|
2359 | |
---|
2360 | int serverSize = client->serverSize; |
---|
2361 | |
---|
2362 | // send area for each connected server |
---|
2363 | CEventClient eventDataIndex(getType(), EVENT_ID_DATA_INDEX); |
---|
2364 | |
---|
2365 | list<CMessage> list_msgsDataIndex; |
---|
2366 | list<CArray<int,1> > list_data_i_index, list_data_j_index; |
---|
2367 | |
---|
2368 | int nbIndex = i_index.numElements(); |
---|
2369 | int niByIndex = max(i_index) - min(i_index) + 1; |
---|
2370 | int njByIndex = max(j_index) - min(j_index) + 1; |
---|
2371 | int dataIindexBound = (1 == data_dim) ? (niByIndex * njByIndex) : niByIndex; |
---|
2372 | int dataJindexBound = (1 == data_dim) ? (niByIndex * njByIndex) : njByIndex; |
---|
2373 | |
---|
2374 | |
---|
2375 | CArray<int,1> dataIIndex(nbIndex), dataJIndex(nbIndex); |
---|
2376 | dataIIndex = -1; |
---|
2377 | dataJIndex = -1; |
---|
2378 | ind = 0; |
---|
2379 | |
---|
2380 | for (idx = 0; idx < data_i_index.numElements(); ++idx) |
---|
2381 | { |
---|
2382 | int dataIidx = data_i_index(idx) + data_ibegin; |
---|
2383 | int dataJidx = data_j_index(idx) + data_jbegin; |
---|
2384 | if ((0 <= dataIidx) && (dataIidx < dataIindexBound) && |
---|
2385 | (0 <= dataJidx) && (dataJidx < dataJindexBound)) |
---|
2386 | { |
---|
2387 | dataIIndex((1 == data_dim) ? dataIidx : dataJidx * ni + dataIidx) = 1; //i_index(dataIidx);//dataIidx; |
---|
2388 | dataJIndex((1 == data_dim) ? dataIidx : dataJidx * ni + dataIidx) = 1; //j_index(dataJidx);// |
---|
2389 | } |
---|
2390 | } |
---|
2391 | |
---|
2392 | std::unordered_map<int, vector<size_t> >::const_iterator it, iteMap; |
---|
2393 | iteMap = indSrv_[serverSize].end(); |
---|
2394 | for (int k = 0; k < connectedServerRank_[serverSize].size(); ++k) |
---|
2395 | { |
---|
2396 | int nbData = 0; |
---|
2397 | int rank = connectedServerRank_[serverSize][k]; |
---|
2398 | it = indSrv_[serverSize].find(rank); |
---|
2399 | if (iteMap != it) |
---|
2400 | nbData = it->second.size(); |
---|
2401 | list_data_i_index.push_back(CArray<int,1>(nbData)); |
---|
2402 | list_data_j_index.push_back(CArray<int,1>(nbData)); |
---|
2403 | |
---|
2404 | const std::vector<size_t>& temp = it->second; |
---|
2405 | for (n = 0; n < nbData; ++n) |
---|
2406 | { |
---|
2407 | idx = static_cast<int>(it->second[n]); |
---|
2408 | i = globalLocalIndexMap_[idx]; |
---|
2409 | list_data_i_index.back()(n) = dataIIndex(i); |
---|
2410 | list_data_j_index.back()(n) = dataJIndex(i); |
---|
2411 | } |
---|
2412 | |
---|
2413 | list_msgsDataIndex.push_back(CMessage()); |
---|
2414 | list_msgsDataIndex.back() << this->getId(); |
---|
2415 | list_msgsDataIndex.back() << list_data_i_index.back() << list_data_j_index.back(); |
---|
2416 | eventDataIndex.push(rank, nbSenders[serverSize][rank], list_msgsDataIndex.back()); |
---|
2417 | } |
---|
2418 | client->sendEvent(eventDataIndex); |
---|
2419 | } |
---|
2420 | } |
---|
2421 | CATCH |
---|
2422 | |
---|
2423 | bool CDomain::dispatchEvent(CEventServer& event) |
---|
2424 | TRY |
---|
2425 | { |
---|
2426 | if (SuperClass::dispatchEvent(event)) return true; |
---|
2427 | else |
---|
2428 | { |
---|
2429 | switch(event.type) |
---|
2430 | { |
---|
2431 | case EVENT_ID_SERVER_ATTRIBUT: |
---|
2432 | recvDistributionAttributes(event); |
---|
2433 | return true; |
---|
2434 | break; |
---|
2435 | case EVENT_ID_INDEX: |
---|
2436 | recvIndex(event); |
---|
2437 | return true; |
---|
2438 | break; |
---|
2439 | case EVENT_ID_LON: |
---|
2440 | recvLon(event); |
---|
2441 | return true; |
---|
2442 | break; |
---|
2443 | case EVENT_ID_LAT: |
---|
2444 | recvLat(event); |
---|
2445 | return true; |
---|
2446 | break; |
---|
2447 | case EVENT_ID_AREA: |
---|
2448 | recvArea(event); |
---|
2449 | return true; |
---|
2450 | break; |
---|
2451 | case EVENT_ID_DATA_INDEX: |
---|
2452 | recvDataIndex(event); |
---|
2453 | return true; |
---|
2454 | break; |
---|
2455 | default: |
---|
2456 | ERROR("bool CDomain::dispatchEvent(CEventServer& event)", |
---|
2457 | << "Unknown Event"); |
---|
2458 | return false; |
---|
2459 | } |
---|
2460 | } |
---|
2461 | } |
---|
2462 | CATCH |
---|
2463 | |
---|
2464 | /*! |
---|
2465 | Receive index event from clients(s) |
---|
2466 | \param[in] event event contain info about rank and associated index |
---|
2467 | */ |
---|
2468 | void CDomain::recvIndex(CEventServer& event) |
---|
2469 | TRY |
---|
2470 | { |
---|
2471 | string domainId; |
---|
2472 | std::map<int, CBufferIn*> rankBuffers; |
---|
2473 | |
---|
2474 | list<CEventServer::SSubEvent>::iterator it; |
---|
2475 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
2476 | { |
---|
2477 | CBufferIn* buffer = it->buffer; |
---|
2478 | *buffer >> domainId; |
---|
2479 | rankBuffers[it->rank] = buffer; |
---|
2480 | } |
---|
2481 | get(domainId)->recvIndex(rankBuffers); |
---|
2482 | } |
---|
2483 | CATCH |
---|
2484 | |
---|
2485 | /*! |
---|
2486 | Receive index information from client(s). We use the global index for mapping index between |
---|
2487 | sending clients and receiving clients. |
---|
2488 | \param[in] rankBuffers rank of sending client and the corresponding receive buffer |
---|
2489 | */ |
---|
2490 | void CDomain::recvIndex(std::map<int, CBufferIn*>& rankBuffers) |
---|
2491 | TRY |
---|
2492 | { |
---|
2493 | int nbReceived = rankBuffers.size(), i, ind, index, type_int, iIndex, jIndex; |
---|
2494 | recvClientRanks_.resize(nbReceived); |
---|
2495 | |
---|
2496 | std::map<int, CBufferIn*>::iterator it = rankBuffers.begin(), ite = rankBuffers.end(); |
---|
2497 | ind = 0; |
---|
2498 | for (ind = 0; it != ite; ++it, ++ind) |
---|
2499 | { |
---|
2500 | recvClientRanks_[ind] = it->first; |
---|
2501 | CBufferIn& buffer = *(it->second); |
---|
2502 | buffer >> type_int >> isCurvilinear >> indGlob_[it->first]; |
---|
2503 | type.setValue((type_attr::t_enum)type_int); // probleme des type enum avec les buffers : ToFix |
---|
2504 | } |
---|
2505 | int nbIndGlob = 0; |
---|
2506 | for (i = 0; i < nbReceived; ++i) |
---|
2507 | { |
---|
2508 | nbIndGlob += indGlob_[recvClientRanks_[i]].numElements(); |
---|
2509 | } |
---|
2510 | |
---|
2511 | globalLocalIndexMap_.rehash(std::ceil(nbIndGlob/globalLocalIndexMap_.max_load_factor())); |
---|
2512 | i_index.resize(nbIndGlob); |
---|
2513 | j_index.resize(nbIndGlob); |
---|
2514 | int nbIndexGlobMax = nbIndGlob, nbIndLoc; |
---|
2515 | |
---|
2516 | nbIndGlob = 0; |
---|
2517 | for (i = 0; i < nbReceived; ++i) |
---|
2518 | { |
---|
2519 | CArray<int,1>& tmp = indGlob_[recvClientRanks_[i]]; |
---|
2520 | for (ind = 0; ind < tmp.numElements(); ++ind) |
---|
2521 | { |
---|
2522 | index = tmp(ind); |
---|
2523 | if (0 == globalLocalIndexMap_.count(index)) |
---|
2524 | { |
---|
2525 | iIndex = (index%ni_glo)-ibegin; |
---|
2526 | iIndex = (iIndex < 0) ? 0 : iIndex; |
---|
2527 | jIndex = (index/ni_glo)-jbegin; |
---|
2528 | jIndex = (jIndex < 0) ? 0 : jIndex; |
---|
2529 | nbIndLoc = iIndex + ni * jIndex; |
---|
2530 | i_index(nbIndGlob) = index % ni_glo; |
---|
2531 | j_index(nbIndGlob) = index / ni_glo; |
---|
2532 | globalLocalIndexMap_[index] = nbIndGlob; |
---|
2533 | ++nbIndGlob; |
---|
2534 | } |
---|
2535 | } |
---|
2536 | } |
---|
2537 | |
---|
2538 | if (nbIndGlob==0) |
---|
2539 | { |
---|
2540 | i_index.resize(nbIndGlob); |
---|
2541 | j_index.resize(nbIndGlob); |
---|
2542 | } |
---|
2543 | else |
---|
2544 | { |
---|
2545 | i_index.resizeAndPreserve(nbIndGlob); |
---|
2546 | j_index.resizeAndPreserve(nbIndGlob); |
---|
2547 | } |
---|
2548 | |
---|
2549 | domainMask.resize(0); // Mask is not defined anymore on servers |
---|
2550 | } |
---|
2551 | CATCH |
---|
2552 | |
---|
2553 | /*! |
---|
2554 | Receive attributes event from clients(s) |
---|
2555 | \param[in] event event contain info about rank and associated attributes |
---|
2556 | */ |
---|
2557 | void CDomain::recvDistributionAttributes(CEventServer& event) |
---|
2558 | TRY |
---|
2559 | { |
---|
2560 | CBufferIn* buffer=event.subEvents.begin()->buffer; |
---|
2561 | string domainId ; |
---|
2562 | *buffer>>domainId ; |
---|
2563 | get(domainId)->recvDistributionAttributes(*buffer); |
---|
2564 | } |
---|
2565 | CATCH |
---|
2566 | |
---|
2567 | /*! |
---|
2568 | Receive attributes from client(s) |
---|
2569 | \param[in] rank rank of client source |
---|
2570 | \param[in] buffer message containing attributes info |
---|
2571 | */ |
---|
2572 | void CDomain::recvDistributionAttributes(CBufferIn& buffer) |
---|
2573 | TRY |
---|
2574 | { |
---|
2575 | int ni_tmp, ibegin_tmp, nj_tmp, jbegin_tmp; |
---|
2576 | int ni_glo_tmp, nj_glo_tmp; |
---|
2577 | buffer >> isUnstructed_ >> ni_tmp >> ibegin_tmp >> nj_tmp >> jbegin_tmp |
---|
2578 | >> ni_glo_tmp >> nj_glo_tmp |
---|
2579 | >> isCompressible_; |
---|
2580 | |
---|
2581 | ni.setValue(ni_tmp); |
---|
2582 | ibegin.setValue(ibegin_tmp); |
---|
2583 | nj.setValue(nj_tmp); |
---|
2584 | jbegin.setValue(jbegin_tmp); |
---|
2585 | ni_glo.setValue(ni_glo_tmp); |
---|
2586 | nj_glo.setValue(nj_glo_tmp); |
---|
2587 | |
---|
2588 | } |
---|
2589 | CATCH_DUMP_ATTR |
---|
2590 | /*! |
---|
2591 | Receive longitude event from clients(s) |
---|
2592 | \param[in] event event contain info about rank and associated longitude |
---|
2593 | */ |
---|
2594 | void CDomain::recvLon(CEventServer& event) |
---|
2595 | TRY |
---|
2596 | { |
---|
2597 | string domainId; |
---|
2598 | std::map<int, CBufferIn*> rankBuffers; |
---|
2599 | |
---|
2600 | list<CEventServer::SSubEvent>::iterator it; |
---|
2601 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
2602 | { |
---|
2603 | CBufferIn* buffer = it->buffer; |
---|
2604 | *buffer >> domainId; |
---|
2605 | rankBuffers[it->rank] = buffer; |
---|
2606 | } |
---|
2607 | get(domainId)->recvLon(rankBuffers); |
---|
2608 | } |
---|
2609 | CATCH |
---|
2610 | |
---|
2611 | /*! |
---|
2612 | Receive longitude information from client(s) |
---|
2613 | \param[in] rankBuffers rank of sending client and the corresponding receive buffer |
---|
2614 | */ |
---|
2615 | void CDomain::recvLon(std::map<int, CBufferIn*>& rankBuffers) |
---|
2616 | TRY |
---|
2617 | { |
---|
2618 | int nbReceived = rankBuffers.size(), i, ind, index, iindex, jindex, lInd; |
---|
2619 | if (nbReceived != recvClientRanks_.size()) |
---|
2620 | ERROR("void CDomain::recvLon(std::map<int, CBufferIn*>& rankBuffers)", |
---|
2621 | << "The number of sending clients is not correct." |
---|
2622 | << "Expected number: " << recvClientRanks_.size() << " but received " << nbReceived); |
---|
2623 | |
---|
2624 | vector<CArray<double,1> > recvLonValue(nbReceived); |
---|
2625 | vector<CArray<double,2> > recvBoundsLonValue(nbReceived); |
---|
2626 | for (i = 0; i < recvClientRanks_.size(); ++i) |
---|
2627 | { |
---|
2628 | int rank = recvClientRanks_[i]; |
---|
2629 | CBufferIn& buffer = *(rankBuffers[rank]); |
---|
2630 | buffer >> hasLonLat; |
---|
2631 | if (hasLonLat) |
---|
2632 | buffer >> recvLonValue[i]; |
---|
2633 | buffer >> hasBounds; |
---|
2634 | if (hasBounds) |
---|
2635 | buffer >> recvBoundsLonValue[i]; |
---|
2636 | } |
---|
2637 | |
---|
2638 | if (hasLonLat) |
---|
2639 | { |
---|
2640 | int nbLonInd = 0; |
---|
2641 | for (i = 0; i < nbReceived; ++i) |
---|
2642 | { |
---|
2643 | nbLonInd += recvLonValue[i].numElements(); |
---|
2644 | } |
---|
2645 | |
---|
2646 | if (nbLonInd != globalLocalIndexMap_.size()) |
---|
2647 | info (0) << "If domain " << this->getDomainOutputName() <<" does not have overlapped regions between processes " |
---|
2648 | << "something must be wrong with longitude index "<< std::endl; |
---|
2649 | |
---|
2650 | nbLonInd = globalLocalIndexMap_.size(); |
---|
2651 | lonvalue.resize(nbLonInd); |
---|
2652 | if (hasBounds) |
---|
2653 | { |
---|
2654 | bounds_lonvalue.resize(nvertex,nbLonInd); |
---|
2655 | bounds_lonvalue = 0.; |
---|
2656 | } |
---|
2657 | |
---|
2658 | nbLonInd = 0; |
---|
2659 | for (i = 0; i < nbReceived; ++i) |
---|
2660 | { |
---|
2661 | CArray<int,1>& tmpInd = indGlob_[recvClientRanks_[i]]; |
---|
2662 | CArray<double,1>& tmp = recvLonValue[i]; |
---|
2663 | for (ind = 0; ind < tmp.numElements(); ++ind) |
---|
2664 | { |
---|
2665 | lInd = globalLocalIndexMap_[size_t(tmpInd(ind))]; |
---|
2666 | lonvalue(lInd) = tmp(ind); |
---|
2667 | if (hasBounds) |
---|
2668 | { |
---|
2669 | for (int nv = 0; nv < nvertex; ++nv) |
---|
2670 | bounds_lonvalue(nv, lInd) = recvBoundsLonValue[i](nv, ind); |
---|
2671 | } |
---|
2672 | } |
---|
2673 | } |
---|
2674 | } |
---|
2675 | } |
---|
2676 | CATCH_DUMP_ATTR |
---|
2677 | |
---|
2678 | /*! |
---|
2679 | Receive latitude event from clients(s) |
---|
2680 | \param[in] event event contain info about rank and associated latitude |
---|
2681 | */ |
---|
2682 | void CDomain::recvLat(CEventServer& event) |
---|
2683 | TRY |
---|
2684 | { |
---|
2685 | string domainId; |
---|
2686 | std::map<int, CBufferIn*> rankBuffers; |
---|
2687 | |
---|
2688 | list<CEventServer::SSubEvent>::iterator it; |
---|
2689 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
2690 | { |
---|
2691 | CBufferIn* buffer = it->buffer; |
---|
2692 | *buffer >> domainId; |
---|
2693 | rankBuffers[it->rank] = buffer; |
---|
2694 | } |
---|
2695 | get(domainId)->recvLat(rankBuffers); |
---|
2696 | } |
---|
2697 | CATCH |
---|
2698 | |
---|
2699 | /*! |
---|
2700 | Receive latitude information from client(s) |
---|
2701 | \param[in] rankBuffers rank of sending client and the corresponding receive buffer |
---|
2702 | */ |
---|
2703 | void CDomain::recvLat(std::map<int, CBufferIn*>& rankBuffers) |
---|
2704 | TRY |
---|
2705 | { |
---|
2706 | int nbReceived = rankBuffers.size(), i, ind, index, iindex, jindex, lInd; |
---|
2707 | if (nbReceived != recvClientRanks_.size()) |
---|
2708 | ERROR("void CDomain::recvLat(std::map<int, CBufferIn*>& rankBuffers)", |
---|
2709 | << "The number of sending clients is not correct." |
---|
2710 | << "Expected number: " << recvClientRanks_.size() << " but received " << nbReceived); |
---|
2711 | |
---|
2712 | vector<CArray<double,1> > recvLatValue(nbReceived); |
---|
2713 | vector<CArray<double,2> > recvBoundsLatValue(nbReceived); |
---|
2714 | for (i = 0; i < recvClientRanks_.size(); ++i) |
---|
2715 | { |
---|
2716 | int rank = recvClientRanks_[i]; |
---|
2717 | CBufferIn& buffer = *(rankBuffers[rank]); |
---|
2718 | buffer >> hasLonLat; |
---|
2719 | if (hasLonLat) |
---|
2720 | buffer >> recvLatValue[i]; |
---|
2721 | buffer >> hasBounds; |
---|
2722 | if (hasBounds) |
---|
2723 | buffer >> recvBoundsLatValue[i]; |
---|
2724 | } |
---|
2725 | |
---|
2726 | if (hasLonLat) |
---|
2727 | { |
---|
2728 | int nbLatInd = 0; |
---|
2729 | for (i = 0; i < nbReceived; ++i) |
---|
2730 | { |
---|
2731 | nbLatInd += recvLatValue[i].numElements(); |
---|
2732 | } |
---|
2733 | |
---|
2734 | if (nbLatInd != globalLocalIndexMap_.size()) |
---|
2735 | info (0) << "If domain " << this->getDomainOutputName() <<" does not have overlapped regions between processes " |
---|
2736 | << "something must be wrong with latitude index "<< std::endl; |
---|
2737 | |
---|
2738 | nbLatInd = globalLocalIndexMap_.size(); |
---|
2739 | latvalue.resize(nbLatInd); |
---|
2740 | if (hasBounds) |
---|
2741 | { |
---|
2742 | bounds_latvalue.resize(nvertex,nbLatInd); |
---|
2743 | bounds_latvalue = 0. ; |
---|
2744 | } |
---|
2745 | |
---|
2746 | nbLatInd = 0; |
---|
2747 | for (i = 0; i < nbReceived; ++i) |
---|
2748 | { |
---|
2749 | CArray<int,1>& tmpInd = indGlob_[recvClientRanks_[i]]; |
---|
2750 | CArray<double,1>& tmp = recvLatValue[i]; |
---|
2751 | for (ind = 0; ind < tmp.numElements(); ++ind) |
---|
2752 | { |
---|
2753 | lInd = globalLocalIndexMap_[size_t(tmpInd(ind))]; |
---|
2754 | latvalue(lInd) = tmp(ind); |
---|
2755 | if (hasBounds) |
---|
2756 | { |
---|
2757 | CArray<double,2>& boundslat = recvBoundsLatValue[i]; |
---|
2758 | for (int nv = 0; nv < nvertex; ++nv) |
---|
2759 | bounds_latvalue(nv, lInd) = boundslat(nv, ind); |
---|
2760 | } |
---|
2761 | ++nbLatInd; |
---|
2762 | } |
---|
2763 | } |
---|
2764 | } |
---|
2765 | } |
---|
2766 | CATCH_DUMP_ATTR |
---|
2767 | |
---|
2768 | /*! |
---|
2769 | Receive area event from clients(s) |
---|
2770 | \param[in] event event contain info about rank and associated area |
---|
2771 | */ |
---|
2772 | void CDomain::recvArea(CEventServer& event) |
---|
2773 | TRY |
---|
2774 | { |
---|
2775 | string domainId; |
---|
2776 | std::map<int, CBufferIn*> rankBuffers; |
---|
2777 | |
---|
2778 | list<CEventServer::SSubEvent>::iterator it; |
---|
2779 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
2780 | { |
---|
2781 | CBufferIn* buffer = it->buffer; |
---|
2782 | *buffer >> domainId; |
---|
2783 | rankBuffers[it->rank] = buffer; |
---|
2784 | } |
---|
2785 | get(domainId)->recvArea(rankBuffers); |
---|
2786 | } |
---|
2787 | CATCH |
---|
2788 | |
---|
2789 | /*! |
---|
2790 | Receive area information from client(s) |
---|
2791 | \param[in] rankBuffers rank of sending client and the corresponding receive buffer |
---|
2792 | */ |
---|
2793 | void CDomain::recvArea(std::map<int, CBufferIn*>& rankBuffers) |
---|
2794 | TRY |
---|
2795 | { |
---|
2796 | int nbReceived = rankBuffers.size(), i, ind, index, lInd; |
---|
2797 | if (nbReceived != recvClientRanks_.size()) |
---|
2798 | ERROR("void CDomain::recvArea(std::map<int, CBufferIn*>& rankBuffers)", |
---|
2799 | << "The number of sending clients is not correct." |
---|
2800 | << "Expected number: " << recvClientRanks_.size() << " but received " << nbReceived); |
---|
2801 | |
---|
2802 | vector<CArray<double,1> > recvAreaValue(nbReceived); |
---|
2803 | for (i = 0; i < recvClientRanks_.size(); ++i) |
---|
2804 | { |
---|
2805 | int rank = recvClientRanks_[i]; |
---|
2806 | CBufferIn& buffer = *(rankBuffers[rank]); |
---|
2807 | buffer >> hasArea; |
---|
2808 | if (hasArea) |
---|
2809 | buffer >> recvAreaValue[i]; |
---|
2810 | } |
---|
2811 | |
---|
2812 | if (hasArea) |
---|
2813 | { |
---|
2814 | int nbAreaInd = 0; |
---|
2815 | for (i = 0; i < nbReceived; ++i) |
---|
2816 | { |
---|
2817 | nbAreaInd += recvAreaValue[i].numElements(); |
---|
2818 | } |
---|
2819 | |
---|
2820 | if (nbAreaInd != globalLocalIndexMap_.size()) |
---|
2821 | info (0) << "If domain " << this->getDomainOutputName() <<" does not have overlapped regions between processes " |
---|
2822 | << "something must be wrong with area index "<< std::endl; |
---|
2823 | |
---|
2824 | nbAreaInd = globalLocalIndexMap_.size(); |
---|
2825 | areavalue.resize(nbAreaInd); |
---|
2826 | nbAreaInd = 0; |
---|
2827 | for (i = 0; i < nbReceived; ++i) |
---|
2828 | { |
---|
2829 | CArray<int,1>& tmpInd = indGlob_[recvClientRanks_[i]]; |
---|
2830 | CArray<double,1>& tmp = recvAreaValue[i]; |
---|
2831 | for (ind = 0; ind < tmp.numElements(); ++ind) |
---|
2832 | { |
---|
2833 | lInd = globalLocalIndexMap_[size_t(tmpInd(ind))]; |
---|
2834 | areavalue(lInd) = tmp(ind); |
---|
2835 | } |
---|
2836 | } |
---|
2837 | |
---|
2838 | } |
---|
2839 | } |
---|
2840 | CATCH_DUMP_ATTR |
---|
2841 | |
---|
2842 | /*! |
---|
2843 | Compare two domain objects. |
---|
2844 | They are equal if only if they have identical attributes as well as their values. |
---|
2845 | Moreover, they must have the same transformations. |
---|
2846 | \param [in] domain Compared domain |
---|
2847 | \return result of the comparison |
---|
2848 | */ |
---|
2849 | bool CDomain::isEqual(CDomain* obj) |
---|
2850 | TRY |
---|
2851 | { |
---|
2852 | vector<StdString> excludedAttr; |
---|
2853 | excludedAttr.push_back("domain_ref"); |
---|
2854 | bool objEqual = SuperClass::isEqual(obj, excludedAttr); |
---|
2855 | if (!objEqual) return objEqual; |
---|
2856 | |
---|
2857 | TransMapTypes thisTrans = this->getAllTransformations(); |
---|
2858 | TransMapTypes objTrans = obj->getAllTransformations(); |
---|
2859 | |
---|
2860 | TransMapTypes::const_iterator it, itb, ite; |
---|
2861 | std::vector<ETranformationType> thisTransType, objTransType; |
---|
2862 | for (it = thisTrans.begin(); it != thisTrans.end(); ++it) |
---|
2863 | thisTransType.push_back(it->first); |
---|
2864 | for (it = objTrans.begin(); it != objTrans.end(); ++it) |
---|
2865 | objTransType.push_back(it->first); |
---|
2866 | |
---|
2867 | if (thisTransType.size() != objTransType.size()) return false; |
---|
2868 | for (int idx = 0; idx < thisTransType.size(); ++idx) |
---|
2869 | objEqual &= (thisTransType[idx] == objTransType[idx]); |
---|
2870 | |
---|
2871 | return objEqual; |
---|
2872 | } |
---|
2873 | CATCH_DUMP_ATTR |
---|
2874 | |
---|
2875 | /*! |
---|
2876 | Receive data index event from clients(s) |
---|
2877 | \param[in] event event contain info about rank and associated index |
---|
2878 | */ |
---|
2879 | void CDomain::recvDataIndex(CEventServer& event) |
---|
2880 | TRY |
---|
2881 | { |
---|
2882 | string domainId; |
---|
2883 | std::map<int, CBufferIn*> rankBuffers; |
---|
2884 | |
---|
2885 | list<CEventServer::SSubEvent>::iterator it; |
---|
2886 | for (it = event.subEvents.begin(); it != event.subEvents.end(); ++it) |
---|
2887 | { |
---|
2888 | CBufferIn* buffer = it->buffer; |
---|
2889 | *buffer >> domainId; |
---|
2890 | rankBuffers[it->rank] = buffer; |
---|
2891 | } |
---|
2892 | get(domainId)->recvDataIndex(rankBuffers); |
---|
2893 | } |
---|
2894 | CATCH |
---|
2895 | |
---|
2896 | /*! |
---|
2897 | Receive data index information from client(s) |
---|
2898 | A client receives data index from different clients to rebuild its own data index. |
---|
2899 | Because we use global index + mask info to calculate the sending data to client(s), |
---|
2900 | this data index must be updated with mask info (maybe it will change in the future) |
---|
2901 | Because the data index is local, to rebuild data index of received client, we should use global index along with. |
---|
2902 | |
---|
2903 | \param[in] rankBuffers rank of sending client and the corresponding receive buffer |
---|
2904 | */ |
---|
2905 | void CDomain::recvDataIndex(std::map<int, CBufferIn*>& rankBuffers) |
---|
2906 | TRY |
---|
2907 | { |
---|
2908 | int nbReceived = rankBuffers.size(), i, ind, index, indexI, indexJ, type_int, lInd; |
---|
2909 | if (nbReceived != recvClientRanks_.size()) |
---|
2910 | ERROR("void CDomain::recvDataIndex(std::map<int, CBufferIn*>& rankBuffers)", |
---|
2911 | << "The number of sending clients is not correct." |
---|
2912 | << "Expected number: " << recvClientRanks_.size() << " but received " << nbReceived); |
---|
2913 | |
---|
2914 | vector<CArray<int,1> > recvDataIIndex(nbReceived),recvDataJIndex(nbReceived); |
---|
2915 | for (i = 0; i < recvClientRanks_.size(); ++i) |
---|
2916 | { |
---|
2917 | int rank = recvClientRanks_[i]; |
---|
2918 | CBufferIn& buffer = *(rankBuffers[rank]); |
---|
2919 | buffer >> recvDataIIndex[i]; |
---|
2920 | buffer >> recvDataJIndex[i]; |
---|
2921 | } |
---|
2922 | |
---|
2923 | int nbIndex = i_index.numElements(); |
---|
2924 | CArray<int,1> dataIIndex(nbIndex), dataJIndex(nbIndex); |
---|
2925 | dataIIndex = -1; dataJIndex = -1; |
---|
2926 | |
---|
2927 | nbIndex = 0; |
---|
2928 | for (i = 0; i < nbReceived; ++i) |
---|
2929 | { |
---|
2930 | CArray<int,1>& tmpInd = indGlob_[recvClientRanks_[i]]; |
---|
2931 | CArray<int,1>& tmpI = recvDataIIndex[i]; |
---|
2932 | CArray<int,1>& tmpJ = recvDataJIndex[i]; |
---|
2933 | if ((tmpI.numElements() != tmpInd.numElements()) || (tmpJ.numElements() != tmpInd.numElements())) |
---|
2934 | ERROR("void CDomain::recvDataIndex(std::map<int, CBufferIn*>& rankBuffers)", |
---|
2935 | << "The number of global received index is not coherent with the number of received data index." |
---|
2936 | << "Expected number of global index: " << tmpI.numElements() << " but received " << tmpInd.numElements()); |
---|
2937 | |
---|
2938 | for (ind = 0; ind < tmpI.numElements(); ++ind) |
---|
2939 | { |
---|
2940 | lInd = globalLocalIndexMap_[size_t(tmpInd(ind))]; |
---|
2941 | dataIIndex(lInd) = (-1 == dataIIndex(lInd)) ? tmpI(ind) : dataIIndex(lInd); // Only fill in dataIndex if there is no data |
---|
2942 | dataJIndex(lInd) = (-1 == dataJIndex(lInd)) ? tmpJ(ind) : dataJIndex(lInd); |
---|
2943 | } |
---|
2944 | } |
---|
2945 | |
---|
2946 | int nbCompressedData = 0; |
---|
2947 | for (ind = 0; ind < dataIIndex.numElements(); ++ind) |
---|
2948 | { |
---|
2949 | indexI = dataIIndex(ind); indexJ = dataJIndex(ind); |
---|
2950 | if ((0 <= indexI) && (0 <= indexJ)) |
---|
2951 | ++nbCompressedData; |
---|
2952 | } |
---|
2953 | |
---|
2954 | data_i_index.resize(nbCompressedData); |
---|
2955 | data_j_index.resize(nbCompressedData); |
---|
2956 | |
---|
2957 | nbCompressedData = 0; |
---|
2958 | for (ind = 0; ind < dataIIndex.numElements(); ++ind) |
---|
2959 | { |
---|
2960 | indexI = dataIIndex(ind); indexJ = dataJIndex(ind); |
---|
2961 | if ((0 <= indexI) && (0 <= indexJ)) |
---|
2962 | { |
---|
2963 | data_i_index(nbCompressedData) = (1 == data_dim) ? ind : ind % ni; |
---|
2964 | data_j_index(nbCompressedData) = (1 == data_dim) ? 0 : ind / ni; |
---|
2965 | ++nbCompressedData; |
---|
2966 | } |
---|
2967 | } |
---|
2968 | |
---|
2969 | // Reset data_ibegin, data_jbegin |
---|
2970 | data_ibegin.setValue(0); |
---|
2971 | data_jbegin.setValue(0); |
---|
2972 | } |
---|
2973 | CATCH_DUMP_ATTR |
---|
2974 | |
---|
2975 | CTransformation<CDomain>* CDomain::addTransformation(ETranformationType transType, const StdString& id) |
---|
2976 | TRY |
---|
2977 | { |
---|
2978 | transformationMap_.push_back(std::make_pair(transType, CTransformation<CDomain>::createTransformation(transType,id))); |
---|
2979 | return transformationMap_.back().second; |
---|
2980 | } |
---|
2981 | CATCH_DUMP_ATTR |
---|
2982 | |
---|
2983 | /*! |
---|
2984 | Check whether a domain has transformation |
---|
2985 | \return true if domain has transformation |
---|
2986 | */ |
---|
2987 | bool CDomain::hasTransformation() |
---|
2988 | TRY |
---|
2989 | { |
---|
2990 | return (!transformationMap_.empty()); |
---|
2991 | } |
---|
2992 | CATCH_DUMP_ATTR |
---|
2993 | |
---|
2994 | /*! |
---|
2995 | Set transformation for current domain. It's the method to move transformation in hierarchy |
---|
2996 | \param [in] domTrans transformation on domain |
---|
2997 | */ |
---|
2998 | void CDomain::setTransformations(const TransMapTypes& domTrans) |
---|
2999 | TRY |
---|
3000 | { |
---|
3001 | transformationMap_ = domTrans; |
---|
3002 | } |
---|
3003 | CATCH_DUMP_ATTR |
---|
3004 | |
---|
3005 | /*! |
---|
3006 | Get all transformation current domain has |
---|
3007 | \return all transformation |
---|
3008 | */ |
---|
3009 | CDomain::TransMapTypes CDomain::getAllTransformations(void) |
---|
3010 | TRY |
---|
3011 | { |
---|
3012 | return transformationMap_; |
---|
3013 | } |
---|
3014 | CATCH_DUMP_ATTR |
---|
3015 | |
---|
3016 | void CDomain::duplicateTransformation(CDomain* src) |
---|
3017 | TRY |
---|
3018 | { |
---|
3019 | if (src->hasTransformation()) |
---|
3020 | { |
---|
3021 | this->setTransformations(src->getAllTransformations()); |
---|
3022 | } |
---|
3023 | } |
---|
3024 | CATCH_DUMP_ATTR |
---|
3025 | |
---|
3026 | /*! |
---|
3027 | * Go through the hierarchy to find the domain from which the transformations must be inherited |
---|
3028 | */ |
---|
3029 | void CDomain::solveInheritanceTransformation() |
---|
3030 | TRY |
---|
3031 | { |
---|
3032 | if (hasTransformation() || !hasDirectDomainReference()) |
---|
3033 | return; |
---|
3034 | |
---|
3035 | CDomain* domain = this; |
---|
3036 | std::vector<CDomain*> refDomains; |
---|
3037 | while (!domain->hasTransformation() && domain->hasDirectDomainReference()) |
---|
3038 | { |
---|
3039 | refDomains.push_back(domain); |
---|
3040 | domain = domain->getDirectDomainReference(); |
---|
3041 | } |
---|
3042 | |
---|
3043 | if (domain->hasTransformation()) |
---|
3044 | for (size_t i = 0; i < refDomains.size(); ++i) |
---|
3045 | refDomains[i]->setTransformations(domain->getAllTransformations()); |
---|
3046 | } |
---|
3047 | CATCH_DUMP_ATTR |
---|
3048 | |
---|
3049 | void CDomain::setContextClient(CContextClient* contextClient) |
---|
3050 | TRY |
---|
3051 | { |
---|
3052 | if (clientsSet.find(contextClient)==clientsSet.end()) |
---|
3053 | { |
---|
3054 | clients.push_back(contextClient) ; |
---|
3055 | clientsSet.insert(contextClient); |
---|
3056 | } |
---|
3057 | } |
---|
3058 | CATCH_DUMP_ATTR |
---|
3059 | |
---|
3060 | /*! |
---|
3061 | Parse children nodes of a domain in xml file. |
---|
3062 | Whenver there is a new transformation, its type and name should be added into this function |
---|
3063 | \param node child node to process |
---|
3064 | */ |
---|
3065 | void CDomain::parse(xml::CXMLNode & node) |
---|
3066 | TRY |
---|
3067 | { |
---|
3068 | SuperClass::parse(node); |
---|
3069 | |
---|
3070 | if (node.goToChildElement()) |
---|
3071 | { |
---|
3072 | StdString nodeElementName; |
---|
3073 | do |
---|
3074 | { |
---|
3075 | StdString nodeId(""); |
---|
3076 | if (node.getAttributes().end() != node.getAttributes().find("id")) |
---|
3077 | { nodeId = node.getAttributes()["id"]; } |
---|
3078 | |
---|
3079 | nodeElementName = node.getElementName(); |
---|
3080 | std::map<StdString, ETranformationType>::const_iterator ite = transformationMapList_.end(), it; |
---|
3081 | it = transformationMapList_.find(nodeElementName); |
---|
3082 | if (ite != it) |
---|
3083 | { |
---|
3084 | transformationMap_.push_back(std::make_pair(it->second, CTransformation<CDomain>::createTransformation(it->second, |
---|
3085 | nodeId, |
---|
3086 | &node))); |
---|
3087 | } |
---|
3088 | else |
---|
3089 | { |
---|
3090 | ERROR("void CDomain::parse(xml::CXMLNode & node)", |
---|
3091 | << "The transformation " << nodeElementName << " has not been supported yet."); |
---|
3092 | } |
---|
3093 | } while (node.goToNextElement()) ; |
---|
3094 | node.goToParentElement(); |
---|
3095 | } |
---|
3096 | } |
---|
3097 | CATCH_DUMP_ATTR |
---|
3098 | //---------------------------------------------------------------- |
---|
3099 | |
---|
3100 | DEFINE_REF_FUNC(Domain,domain) |
---|
3101 | |
---|
3102 | ///--------------------------------------------------------------- |
---|
3103 | |
---|
3104 | } // namespace xios |
---|