[591] | 1 | #ifndef __XIOS_CGrid__ |
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| 2 | #define __XIOS_CGrid__ |
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[219] | 3 | |
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[591] | 4 | /// XIOS headers /// |
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| 5 | #include "xios_spl.hpp" |
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[219] | 6 | #include "group_factory.hpp" |
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| 7 | |
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| 8 | #include "declare_group.hpp" |
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| 9 | #include "domain.hpp" |
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| 10 | #include "axis.hpp" |
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[887] | 11 | #include "scalar.hpp" |
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[369] | 12 | #include "array_new.hpp" |
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| 13 | #include "attribute_array.hpp" |
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[552] | 14 | #include "distribution_server.hpp" |
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[553] | 15 | #include "client_server_mapping.hpp" |
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[567] | 16 | #include "utils.hpp" |
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[619] | 17 | #include "transformation_enum.hpp" |
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[1918] | 18 | #include "grid_local_connector.hpp" |
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| 19 | #include "grid_elements.hpp" |
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[1930] | 20 | #include "grid_scatterer_connector.hpp" |
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| 21 | #include "grid_gatherer_connector.hpp" |
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[1984] | 22 | #include "transformation_path.hpp" |
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| 23 | #include "filter.hpp" |
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[1999] | 24 | #include "grid_algorithm.hpp" |
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[219] | 25 | |
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[1930] | 26 | |
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[335] | 27 | namespace xios { |
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[509] | 28 | |
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[1564] | 29 | /// ////////////////////// Declarations ////////////////////// /// |
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[219] | 30 | |
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| 31 | class CGridGroup; |
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| 32 | class CGridAttributes; |
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[540] | 33 | class CDomainGroup; |
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| 34 | class CAxisGroup; |
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[887] | 35 | class CScalarGroup; |
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[219] | 36 | class CGrid; |
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[551] | 37 | class CDistributionClient; |
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[552] | 38 | class CDistributionServer; |
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[553] | 39 | class CServerDistributionDescription; |
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| 40 | class CClientServerMapping; |
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[2011] | 41 | |
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[219] | 42 | ///-------------------------------------------------------------- |
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| 43 | |
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| 44 | // Declare/Define CGridAttribute |
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| 45 | BEGIN_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 46 | # include "grid_attribute.conf" |
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| 47 | END_DECLARE_ATTRIBUTE_MAP(CGrid) |
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| 48 | |
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| 49 | ///-------------------------------------------------------------- |
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| 50 | |
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| 51 | class CGrid |
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| 52 | : public CObjectTemplate<CGrid> |
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| 53 | , public CGridAttributes |
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| 54 | { |
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| 55 | /// typedef /// |
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| 56 | typedef CObjectTemplate<CGrid> SuperClass; |
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| 57 | typedef CGridAttributes SuperClassAttribute; |
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| 58 | |
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[1930] | 59 | private: |
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| 60 | |
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| 61 | // define a structure to store elements (CDomain, CAxis, CScalar) using a void* and a type to cast the pointer |
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| 62 | enum EElementType { TYPE_SCALAR, TYPE_AXIS, TYPE_DOMAIN } ; |
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| 63 | struct SElement {void* ptr ; EElementType type ; CScalar* scalar ; CAxis* axis ; CDomain* domain ; } ; |
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| 64 | vector<SElement> elements_ ; |
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| 65 | bool elementsComputed_ = false ; |
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| 66 | /** retrieve the vector of elements as a structure containing a void* and the type of pointer */ |
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| 67 | vector<SElement>& getElements(void) { if (!elementsComputed_) computeElements() ; return elements_ ; } |
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| 68 | void computeElements(void) ; |
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| 69 | /** List order of axis and domain in a grid, if there is a domain, it will take value 2, axis 1, scalar 0 */ |
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| 70 | std::vector<int> order_; |
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| 71 | |
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[676] | 72 | public: |
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[219] | 73 | |
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| 74 | typedef CGridAttributes RelAttributes; |
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| 75 | typedef CGridGroup RelGroup; |
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| 76 | |
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[300] | 77 | enum EEventId |
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| 78 | { |
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[1973] | 79 | EVENT_ID_ADD_DOMAIN, EVENT_ID_ADD_AXIS, EVENT_ID_ADD_SCALAR, |
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[1943] | 80 | EVENT_ID_SEND_MASK, |
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| 81 | |
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[650] | 82 | }; |
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[509] | 83 | |
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[219] | 84 | /// Constructeurs /// |
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| 85 | CGrid(void); |
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[650] | 86 | explicit CGrid(const StdString& id); |
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| 87 | CGrid(const CGrid& grid); // Not implemented yet. |
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| 88 | CGrid(const CGrid* const grid); // Not implemented yet. |
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[219] | 89 | |
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| 90 | /// Traitements /// |
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[509] | 91 | // void solveReference(void); |
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[219] | 92 | |
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[676] | 93 | void checkEligibilityForCompressedOutput(); |
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[1930] | 94 | |
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[676] | 95 | |
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[509] | 96 | |
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| 97 | void checkMaskIndex(bool doCalculateIndex); |
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| 98 | |
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[650] | 99 | // virtual void toBinary (StdOStream& os) const; |
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| 100 | // virtual void fromBinary(StdIStream& is); |
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[219] | 101 | |
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[676] | 102 | void addRelFileCompressed(const StdString& filename); |
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| 103 | |
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[219] | 104 | /// Tests /// |
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[676] | 105 | bool isCompressible(void) const; |
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| 106 | bool isWrittenCompressed(const StdString& filename) const; |
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[219] | 107 | |
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[676] | 108 | public: |
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[219] | 109 | |
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| 110 | /// Accesseurs /// |
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[1158] | 111 | StdSize getDimension(void); |
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[509] | 112 | |
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[1869] | 113 | StdSize getDataSize(void) ; |
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[219] | 114 | |
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[1875] | 115 | /** |
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| 116 | * Get the local data grid size, ie the size of the compressed grid (inside the workflow) |
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| 117 | * \return The size od the compressed grid |
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| 118 | */ |
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| 119 | StdSize getLocalDataSize(void) ; |
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| 120 | |
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[1973] | 121 | |
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[650] | 122 | virtual void parse(xml::CXMLNode& node); |
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[540] | 123 | |
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[219] | 124 | /// Destructeur /// |
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| 125 | virtual ~CGrid(void); |
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| 126 | |
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[676] | 127 | public: |
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[219] | 128 | |
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| 129 | /// Accesseurs statiques /// |
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| 130 | static StdString GetName(void); |
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| 131 | static StdString GetDefName(void); |
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[509] | 132 | |
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[219] | 133 | static ENodeType GetType(void); |
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| 134 | |
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| 135 | /// Instanciateurs Statiques /// |
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[347] | 136 | static CGrid* createGrid(CDomain* domain); |
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| 137 | static CGrid* createGrid(CDomain* domain, CAxis* axis); |
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[745] | 138 | static CGrid* createGrid(const std::vector<CDomain*>& domains, const std::vector<CAxis*>& axis, |
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[887] | 139 | const CArray<int,1>& axisDomainOrder = CArray<int,1>()); |
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[745] | 140 | static CGrid* createGrid(StdString id, const std::vector<CDomain*>& domains, const std::vector<CAxis*>& axis, |
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[887] | 141 | const std::vector<CScalar*>& scalars, const CArray<int,1>& axisDomainOrder = CArray<int,1>()); |
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| 142 | static CGrid* createGrid(const std::vector<CDomain*>& domains, const std::vector<CAxis*>& axis, |
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| 143 | const std::vector<CScalar*>& scalars, const CArray<int,1>& axisDomainOrder); |
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[2311] | 144 | static CGrid* get(const string& id, bool noError=false) ; //<! return grid pointer using id |
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| 145 | static bool has(const string& id) ; //<! return if grid exist using id |
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[2315] | 146 | static CField* getFieldFromId(const string& id) ; //<! return field id if used in grid reference |
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[745] | 147 | static StdString generateId(const std::vector<CDomain*>& domains, const std::vector<CAxis*>& axis, |
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[887] | 148 | const std::vector<CScalar*>& scalars, const CArray<int,1>& axisDomainOrder = CArray<int,1>()); |
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[823] | 149 | static StdString generateId(const CGrid* gridSrc, const CGrid* gridDest); |
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| 150 | static CGrid* cloneGrid(const StdString& idNewGrid, CGrid* gridSrc); |
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[219] | 151 | |
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[2206] | 152 | CDomain* getAssociatedDomain(const string& domainId, bool noError=false) ; |
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| 153 | CAxis* getAssociatedAxis(const string& axisId, bool noError=false) ; |
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| 154 | CScalar* getAssociatedScalar(const string& scalarId, bool noError=false) ; |
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[1144] | 155 | public: |
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[1869] | 156 | void solveDomainAxisRef(bool areAttributesChecked); |
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| 157 | void checkElementsAttributes(void) ; |
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[219] | 158 | |
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[509] | 159 | void solveDomainRef(bool checkAtt); |
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| 160 | void solveAxisRef(bool checkAtt); |
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[887] | 161 | void solveScalarRef(bool checkAtt); |
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[1869] | 162 | void solveElementsRefInheritance(bool apply = true); |
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[2206] | 163 | bool activateFieldWorkflow(CGarbageCollector& gc) ; |
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[1869] | 164 | // void solveTransformations(); |
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[775] | 165 | void solveDomainAxisBaseRef(); |
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[509] | 166 | |
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[835] | 167 | CDomain* addDomain(const std::string& id=StdString()); |
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| 168 | CAxis* addAxis(const std::string& id=StdString()); |
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[887] | 169 | CScalar* addScalar(const std::string& id=StdString()); |
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[1870] | 170 | |
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| 171 | public: |
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| 172 | void sendGridToFileServer(CContextClient* client) ; |
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| 173 | private: |
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| 174 | std::set<CContextClient*> sendGridToFileServer_done_ ; |
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[1875] | 175 | |
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[1870] | 176 | public: |
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[1875] | 177 | void sendGridToCouplerOut(CContextClient* client, const string& fieldId) ; |
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| 178 | private: |
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| 179 | std::set<CContextClient*> sendGridToCouplerOut_done_ ; |
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| 180 | |
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| 181 | public: |
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| 182 | void makeAliasForCoupling(const string& fieldId) ; |
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[2022] | 183 | string getCouplingAlias(const string& fieldId) ; |
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[1875] | 184 | |
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| 185 | public: |
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[1784] | 186 | void sendAddDomain(const std::string& id,CContextClient* contextClient); |
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| 187 | void sendAddAxis(const std::string& id,CContextClient* contextClient); |
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| 188 | void sendAddScalar(const std::string& id,CContextClient* contextClient); |
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[1974] | 189 | |
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[650] | 190 | static void recvAddDomain(CEventServer& event); |
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| 191 | void recvAddDomain(CBufferIn& buffer); |
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| 192 | static void recvAddAxis(CEventServer& event); |
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| 193 | void recvAddAxis(CBufferIn& buffer); |
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[887] | 194 | static void recvAddScalar(CEventServer& event); |
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| 195 | void recvAddScalar(CBufferIn& buffer); |
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[540] | 196 | |
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[650] | 197 | static bool dispatchEvent(CEventServer& event); |
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[1875] | 198 | |
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| 199 | public: |
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[1294] | 200 | void setContextClient(CContextClient* contextClient); |
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| 201 | |
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[1330] | 202 | std::map<int, StdSize> getAttributesBufferSize(CContextClient* client, bool bufferForWriting = false); |
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| 203 | std::map<int, StdSize> getDataBufferSize(CContextClient* client, const std::string& id = "", bool bufferForWriting = false); |
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[540] | 204 | std::vector<StdString> getDomainList(); |
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| 205 | std::vector<StdString> getAxisList(); |
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[887] | 206 | std::vector<StdString> getScalarList(); |
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[540] | 207 | std::vector<CDomain*> getDomains(); |
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| 208 | std::vector<CAxis*> getAxis(); |
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[887] | 209 | std::vector<CScalar*> getScalars(); |
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[943] | 210 | CDomain* getDomain(int domainIndex); |
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| 211 | CAxis* getAxis(int axisIndex); |
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| 212 | CScalar* getScalar(int scalarIndex); |
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[551] | 213 | std::vector<int> getAxisOrder(); |
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[567] | 214 | std::vector<int> getGlobalDimension(); |
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[1236] | 215 | bool isScalarGrid() const; |
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[540] | 216 | |
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[567] | 217 | bool doGridHaveDataToWrite(); |
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[1235] | 218 | bool doGridHaveDataDistributed(CContextClient* client = 0); |
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[567] | 219 | |
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[1984] | 220 | /////////////////////////////////////////// |
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| 221 | //////// TRANSFORMATIONS ///// |
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| 222 | /////////////////////////////////////////// |
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| 223 | public: |
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[1988] | 224 | pair<shared_ptr<CFilter>, shared_ptr<CFilter> > buildTransformationGraph(CGarbageCollector& gc, bool isSource, CGrid* gridSrc, double detectMissingValues, |
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[2144] | 225 | double defaultValue, CGrid*& newGrid, bool graphEnabled=false, CField* field=0) ; |
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[1984] | 226 | private: |
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[2270] | 227 | shared_ptr<CGridAlgorithm> gridAlgorithm_ = nullptr ; |
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[1999] | 228 | public: |
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[2270] | 229 | void setGridAlgorithm(shared_ptr<CGridAlgorithm> gridAlgorithm) {gridAlgorithm_ = gridAlgorithm;} |
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| 230 | shared_ptr<CGridAlgorithm> getGridAlgorithm(void) { return gridAlgorithm_ ;} |
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[1984] | 231 | |
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| 232 | /////////////////////////////////////////// |
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| 233 | public: |
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| 234 | |
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| 235 | size_t getGlobalWrittenSize(void) ; |
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[1875] | 236 | |
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| 237 | bool isCompleted(void) ; |
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| 238 | void setCompleted(void) ; |
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| 239 | void unsetCompleted(void) ; |
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[509] | 240 | |
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[1869] | 241 | |
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[1637] | 242 | bool hasMask(void) const; |
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[1918] | 243 | /** get mask pointer stored in mask_1d, or mask_2d, or..., or mask_7d */ |
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| 244 | CArray<bool,1> mask_ ; |
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| 245 | CArray<bool,1>& getMask(void) ; |
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[509] | 246 | |
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[1973] | 247 | private: |
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[1870] | 248 | /** Client-like distribution calculated based on the knowledge of the entire grid */ |
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| 249 | CDistributionClient* clientDistribution_; |
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| 250 | public: |
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[1869] | 251 | void computeClientDistribution(void) ; |
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[1870] | 252 | private: |
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[1869] | 253 | bool computeClientDistribution_done_ = false ; |
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[1870] | 254 | public: |
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| 255 | CDistributionClient* getClientDistribution(void); |
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[1869] | 256 | |
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[1871] | 257 | private: |
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[540] | 258 | void setVirtualDomainGroup(CDomainGroup* newVDomainGroup); |
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| 259 | void setVirtualAxisGroup(CAxisGroup* newVAxisGroup); |
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[887] | 260 | void setVirtualScalarGroup(CScalarGroup* newVScalarGroup); |
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[567] | 261 | |
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[887] | 262 | void setDomainList(const std::vector<CDomain*> domains = std::vector<CDomain*>()); |
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[540] | 263 | void setAxisList(const std::vector<CAxis*> axis = std::vector<CAxis*>()); |
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[887] | 264 | void setScalarList(const std::vector<CScalar*> scalars = std::vector<CScalar*>()); |
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[540] | 265 | |
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[887] | 266 | CDomainGroup* getVirtualDomainGroup() const; |
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[540] | 267 | CAxisGroup* getVirtualAxisGroup() const; |
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[887] | 268 | CScalarGroup* getVirtualScalarGroup() const; |
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[619] | 269 | |
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[1158] | 270 | int computeGridGlobalDimension(std::vector<int>& globalDim, |
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| 271 | const std::vector<CDomain*> domains, |
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| 272 | const std::vector<CAxis*> axis, |
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| 273 | const std::vector<CScalar*> scalars, |
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| 274 | const CArray<int,1>& axisDomainOrder); |
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| 275 | int getDistributedDimension(); |
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[1794] | 276 | public: |
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| 277 | |
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[1870] | 278 | bool isDataDistributed(void) ; |
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[540] | 279 | private: |
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[1236] | 280 | |
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[1294] | 281 | /** Clients that have to send a grid. There can be multiple clients in case of secondary server, otherwise only one client. */ |
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[1353] | 282 | std::list<CContextClient*> clients; |
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| 283 | std::set<CContextClient*> clientsSet; |
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[1294] | 284 | |
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[1870] | 285 | private: |
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[1294] | 286 | bool isChecked; |
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| 287 | bool isDomainAxisChecked; |
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| 288 | bool isIndexSent; |
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| 289 | |
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[540] | 290 | CDomainGroup* vDomainGroup_; |
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| 291 | CAxisGroup* vAxisGroup_; |
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[887] | 292 | CScalarGroup* vScalarGroup_; |
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| 293 | std::vector<std::string> axisList_, domList_, scalarList_; |
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| 294 | bool isAxisListSet, isDomListSet, isScalarListSet; |
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[567] | 295 | |
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[1330] | 296 | /** Map storing local ranks of connected receivers. Key = size of receiver's intracomm. |
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| 297 | * It is calculated in computeConnectedClients(). */ |
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[1263] | 298 | std::map<int, std::vector<int> > connectedServerRank_; |
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[1243] | 299 | |
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[1330] | 300 | /** Map storing the size of data to be send. Key = size of receiver's intracomm |
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| 301 | * It is calculated in computeConnectedClients(). */ |
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[1263] | 302 | std::map<int, std::map<int,size_t> > connectedDataSize_; |
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[1243] | 303 | |
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[1330] | 304 | /** Ranks of connected receivers in case of reading. It is calculated in recvIndex(). */ |
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| 305 | std::vector<int> connectedServerRankRead_; |
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| 306 | |
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| 307 | /** Size of data to be send in case of reading. It is calculated in recvIndex(). */ |
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| 308 | std::map<int,size_t> connectedDataSizeRead_; |
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[1870] | 309 | |
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[676] | 310 | //! True if and only if the data defined on the grid can be outputted in a compressed way |
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| 311 | bool isCompressible_; |
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| 312 | std::set<std::string> relFilesCompressed; |
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[619] | 313 | |
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[1870] | 314 | |
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[620] | 315 | std::vector<int> axisPositionInGrid_; |
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[1870] | 316 | void computeAxisPositionInGrid(void) ; |
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| 317 | bool computeAxisPositionInGrid_done_ = false ; |
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| 318 | std::vector<int>& getAxisPositionInGrid(void) { if (!computeAxisPositionInGrid_done_) computeAxisPositionInGrid() ; return axisPositionInGrid_ ;} |
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| 319 | |
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[1158] | 320 | bool hasDomainAxisBaseRef_; |
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[823] | 321 | std::map<CGrid*, std::pair<bool,StdString> > gridSrc_; |
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[1243] | 322 | |
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[1930] | 323 | ////////////////////////////////////////////////////////////////////////////////////// |
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| 324 | // this part is related to distribution, element definition, views and connectors // |
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| 325 | ////////////////////////////////////////////////////////////////////////////////////// |
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[1984] | 326 | public: |
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| 327 | CGrid* duplicateSentGrid(void) ; |
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[1943] | 328 | private: |
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| 329 | static void recvMask(CEventServer& event) ; |
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| 330 | void receiveMask(CEventServer& event) ; |
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[1243] | 331 | |
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[1918] | 332 | private: |
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[2267] | 333 | shared_ptr<CGridLocalElements> gridLocalElements_= nullptr ; |
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[1918] | 334 | void computeGridLocalElements(void) ; |
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| 335 | public: |
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[2267] | 336 | shared_ptr<CGridLocalElements> getGridLocalElements(void) { if (gridLocalElements_==nullptr) computeGridLocalElements() ; return gridLocalElements_ ;} |
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[1918] | 337 | |
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| 338 | private: |
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[2267] | 339 | shared_ptr<CGridLocalConnector> modelToWorkflowConnector_ = nullptr ; |
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[1918] | 340 | public: |
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| 341 | void computeModelToWorkflowConnector(void) ; |
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[2267] | 342 | shared_ptr<CGridLocalConnector> getModelToWorkflowConnector(void) { if (modelToWorkflowConnector_==nullptr) computeModelToWorkflowConnector() ; return modelToWorkflowConnector_;} |
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[1918] | 343 | |
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[1930] | 344 | private: |
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[2267] | 345 | shared_ptr<CGridLocalConnector> workflowToModelConnector_ = nullptr; |
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[1930] | 346 | public: |
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| 347 | void computeWorkflowToModelConnector(void) ; |
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[2267] | 348 | shared_ptr<CGridLocalConnector> getWorkflowToModelConnector(void) { if (workflowToModelConnector_==nullptr) computeWorkflowToModelConnector() ; return workflowToModelConnector_;} |
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[1930] | 349 | |
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| 350 | public: //? |
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[2022] | 351 | void distributeGridToServer(CContextClient* client, const string& fieldId=""); |
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[1930] | 352 | |
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[1934] | 353 | |
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[1930] | 354 | private: |
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[2267] | 355 | shared_ptr<CGridLocalConnector> workflowToFullConnector_ = nullptr; |
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[1930] | 356 | public: |
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| 357 | void computeWorkflowToFullConnector(void) ; |
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[2267] | 358 | shared_ptr<CGridLocalConnector> getWorkflowToFullConnector(void) { if (workflowToFullConnector_==nullptr) computeWorkflowToFullConnector() ; return workflowToFullConnector_;} |
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[1930] | 359 | |
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| 360 | private: |
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[2267] | 361 | shared_ptr<CGridLocalConnector> fullToWorkflowConnector_ = nullptr; |
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[1930] | 362 | public: |
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| 363 | void computeFullToWorkflowConnector(void) ; |
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[2267] | 364 | shared_ptr<CGridLocalConnector> getFullToWorkflowConnector(void) { if (fullToWorkflowConnector_==nullptr) computeFullToWorkflowConnector() ; return fullToWorkflowConnector_;} |
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[1930] | 365 | |
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[1934] | 366 | |
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| 367 | |
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[1930] | 368 | private: |
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[2267] | 369 | shared_ptr<CGridGathererConnector> clientFromClientConnector_ = nullptr ; |
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[1930] | 370 | public: |
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[2267] | 371 | shared_ptr<CGridGathererConnector> getClientFromClientConnector(void) { if (clientFromClientConnector_==nullptr) computeClientFromClientConnector() ; return clientFromClientConnector_;} |
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[1930] | 372 | void computeClientFromClientConnector(void) ; |
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| 373 | |
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| 374 | private: |
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[2267] | 375 | map<CContextClient*, shared_ptr<CGridScattererConnector>> clientToClientConnector_ ; |
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[1930] | 376 | public: |
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[2267] | 377 | shared_ptr<CGridScattererConnector> getClientToClientConnector(CContextClient* client) { return clientToClientConnector_[client] ;} // make some test to see if connector exits for the given client |
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[1930] | 378 | |
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| 379 | |
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| 380 | private: |
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[2267] | 381 | map<CContextClient*,shared_ptr<CGridGathererConnector>> clientFromServerConnector_ ; |
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[1930] | 382 | public: |
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[2267] | 383 | shared_ptr<CGridGathererConnector> getClientFromServerConnector(CContextClient* client) { return clientFromServerConnector_[client];} |
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[1930] | 384 | void computeClientFromServerConnector(void) ; |
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| 385 | |
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[1934] | 386 | private: |
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[2267] | 387 | shared_ptr<CGridScattererConnector> serverToClientConnector_=nullptr ; |
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[1934] | 388 | public: |
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[2267] | 389 | shared_ptr<CGridScattererConnector> getServerToClientConnector(void) { if (serverToClientConnector_==nullptr) computeServerToClientConnector() ; return serverToClientConnector_;} |
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[1934] | 390 | void computeServerToClientConnector(void) ; |
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| 391 | private: |
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[2267] | 392 | map<CContextClient*, shared_ptr<CGridScattererConnector>> clientToServerConnector_ ; |
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[1934] | 393 | public: |
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[2267] | 394 | shared_ptr<CGridScattererConnector> getClientToServerConnector(CContextClient* client) { return clientToServerConnector_[client] ;} // make some test to see if connector exits for the given client |
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[1934] | 395 | |
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| 396 | private: |
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[2267] | 397 | shared_ptr<CGridGathererConnector> serverFromClientConnector_ = nullptr ; |
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[1934] | 398 | public: |
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[2267] | 399 | shared_ptr<CGridGathererConnector> getServerFromClientConnector(void) { if (serverFromClientConnector_==nullptr) computeServerFromClientConnector() ; return serverFromClientConnector_;} |
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[1934] | 400 | void computeServerFromClientConnector(void) ; |
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| 401 | |
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[219] | 402 | }; // class CGrid |
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| 403 | |
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| 404 | // Declare/Define CGridGroup and CGridDefinition |
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| 405 | DECLARE_GROUP(CGrid); |
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| 406 | |
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| 407 | ///-------------------------------------------------------------- |
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| 408 | |
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[335] | 409 | } // namespace xios |
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[219] | 410 | |
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[591] | 411 | #endif // __XIOS_CGrid__ |
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