source: XIOS/dev/dev_ym/XIOS_COUPLING/src/node/axis.hpp @ 1958

Last change on this file since 1958 was 1956, checked in by ymipsl, 4 years ago

Xios coupling

  • fix problem when sending grid mask from client to server
  • remove methods about grid compression, which will be managed in other ways

YM

  • Property copyright set to
    Software name : XIOS (Xml I/O Server)
    http://forge.ipsl.jussieu.fr/ioserver
    Creation date : January 2009
    Licence : CeCCIL version2
    see license file in root directory : Licence_CeCILL_V2-en.txt
    or http://www.cecill.info/licences/Licence_CeCILL_V2-en.html
    Holder : CEA/LSCE (Laboratoire des Sciences du CLimat et de l'Environnement)
    CNRS/IPSL (Institut Pierre Simon Laplace)
    Project Manager : Yann Meurdesoif
    yann.meurdesoif@cea.fr
  • Property svn:executable set to *
File size: 13.4 KB
RevLine 
[591]1#ifndef __XIOS_CAxis__
2#define __XIOS_CAxis__
[219]3
[591]4/// XIOS headers ///
5#include "xios_spl.hpp"
[219]6#include "group_factory.hpp"
[619]7#include "virtual_node.hpp"
[219]8
9#include "declare_group.hpp"
[540]10#include "declare_ref_func.hpp"
[619]11#include "declare_virtual_node.hpp"
[369]12#include "attribute_array.hpp"
[399]13#include "attribute_enum.hpp"
14#include "attribute_enum_impl.hpp"
[567]15#include "server_distribution_description.hpp"
[619]16#include "transformation.hpp"
17#include "transformation_enum.hpp"
[1918]18#include "element.hpp"
19#include "local_connector.hpp"
[1930]20#include "scatterer_connector.hpp"
21#include "gatherer_connector.hpp"
22#include "distribution_type.hpp"
[219]23
[1930]24
[335]25namespace xios {
[219]26   /// ////////////////////// Déclarations ////////////////////// ///
27
28   class CAxisGroup;
29   class CAxisAttributes;
30   class CAxis;
31
32   ///--------------------------------------------------------------
33
34   // Declare/Define CAxisAttribute
35   BEGIN_DECLARE_ATTRIBUTE_MAP(CAxis)
[231]36#  include "axis_attribute.conf"
[219]37   END_DECLARE_ATTRIBUTE_MAP(CAxis)
38
39   ///--------------------------------------------------------------
40
41   class CAxis
42      : public CObjectTemplate<CAxis>
43      , public CAxisAttributes
44   {
[987]45               /// typedef ///
46         typedef CObjectTemplate<CAxis>   SuperClass;
47         typedef CAxisAttributes SuperClassAttribute;
48         
[1235]49      public:
[567]50         enum EEventId
51         {
[1144]52           EVENT_ID_DISTRIBUTION_ATTRIBUTE,           
[633]53           EVENT_ID_DISTRIBUTED_VALUE,
[1025]54           EVENT_ID_NON_DISTRIBUTED_VALUE,
55           EVENT_ID_NON_DISTRIBUTED_ATTRIBUTES,
[1930]56           EVENT_ID_DISTRIBUTED_ATTRIBUTES,
57           EVENT_ID_AXIS_DISTRIBUTION,
58           EVENT_ID_SEND_DISTRIBUTED_ATTRIBUTE
[567]59         } ;
60
[1235]61      public:
[219]62         typedef CAxisAttributes RelAttributes;
63         typedef CAxisGroup      RelGroup;
[621]64         typedef CTransformation<CAxis>::TransformationMapTypes TransMapTypes;
[219]65
[621]66      public:
[219]67         /// Constructeurs ///
68         CAxis(void);
69         explicit CAxis(const StdString & id);
70         CAxis(const CAxis & axis);       // Not implemented yet.
71         CAxis(const CAxis * const axis); // Not implemented yet.
72
[622]73         static CAxis* createAxis();
[1158]74
75         /// Accesseurs ///
76         const std::set<StdString> & getRelFiles(void) const;
77
[1639]78         int getNumberWrittenIndexes(MPI_Comm writtenCom);
79         int getTotalNumberWrittenIndexes(MPI_Comm writtenCom);
80         int getOffsetWrittenIndexes(MPI_Comm writtenCom);
81         CArray<int, 1>& getCompressedIndexToWriteOnServer(MPI_Comm writtenCom);
[676]82
[1371]83         std::map<int, StdSize> getAttributesBufferSize(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid,
84                                                        CServerDistributionDescription::ServerDistributionType disType = CServerDistributionDescription::BAND_DISTRIBUTION);
[731]85
[219]86         /// Test ///
87         bool IsWritten(const StdString & filename) const;
[676]88         bool isWrittenCompressed(const StdString& filename) const;
[594]89         bool isDistributed(void) const;
[1956]90       
91        public:
92        /*!
93            \brief return if the axis can be written or not in a compressed way.
94            ie if there are some masked or indexed point on the domain. Valid only on server side.
95            \return true if domain can be writtedn in a compressed way
96         */ 
97         bool isCompressible(void) { if (!isCompressibleComputed_) computeIsCompressible() ; return isCompressible_ ;} 
98        private:
99         bool isCompressible_ ; /** specify if the domain can be written in a compressed way */ 
100         bool isCompressibleComputed_=false ; /** Indicate if compressability has been computed*/
101         void computeIsCompressible() ;
102       
103        public:
[219]104
105         /// Mutateur ///
106         void addRelFile(const StdString & filename);
[676]107         void addRelFileCompressed(const StdString& filename);
[219]108
[1869]109         
[219]110
111         /// Destructeur ///
112         virtual ~CAxis(void);
113
[619]114         virtual void parse(xml::CXMLNode & node);
115
[1345]116         void setContextClient(CContextClient* contextClient);
117
[219]118         /// Accesseurs statiques ///
119         static StdString GetName(void);
120         static StdString GetDefName(void);
121         static ENodeType GetType(void);
122
[1235]123         static bool dispatchEvent(CEventServer& event);         
[1869]124       
125         /// Vérifications ///
126         void checkAttributes(void);
127         bool checkAttributes_done_ = false ;
[1235]128         
[742]129         void checkAttributesOnClient();
[927]130         void checkAttributesOnClientAfterTransformation(const std::vector<int>& globalDim, int orderPositionInGrid,
131                                                         CServerDistributionDescription::ServerDistributionType distType = CServerDistributionDescription::BAND_DISTRIBUTION);
[567]132         void sendCheckedAttributes(const std::vector<int>& globalDim, int orderPositionInGrid,
133                                    CServerDistributionDescription::ServerDistributionType disType = CServerDistributionDescription::BAND_DISTRIBUTION);
[619]134
[1215]135         size_t getGlobalWrittenSize(void) ;
[676]136
[1129]137         void computeWrittenIndex();
[1639]138         void computeWrittenCompressedIndex(MPI_Comm);
[619]139         bool hasTransformation();
140         void solveInheritanceTransformation();
[1144]141         TransMapTypes getAllTransformations();         
[836]142         void duplicateTransformation(CAxis*);
143         CTransformation<CAxis>* addTransformation(ETranformationType transType, const StdString& id="");
[1158]144         bool isEqual(CAxis* axis);
[619]145
[1235]146      public: 
147        bool hasValue;       
[1558]148        bool hasBounds;
149        bool hasLabel;
150
[1637]151        CArray<int,1> localIndexToWriteOnServer;
[1869]152         
153         void computeConnectedClients(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid);
154         private: std::set<CContextClient*> computeConnectedClients_done_ ; public :
155         /** The number of server of a context client. Avoid to re-compute indice computed in a previous computeConnectedClient */
156         private: std::set<int> listNbServer_ ; public:
[676]157
158      private:
[551]159         void checkData();
160         void checkMask();
[1158]161         void checkBounds();
162         void checkLabel();
[1870]163      public:
164         void sendAxisToFileServer(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid) ;
165      private:
166         std::set<CContextClient*> sendAxisToFileServer_done_ ;
167     
[1875]168      public:
169         void sendAxisToCouplerOut(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid, const string& fieldId, int posInGrid) ;
[1870]170      private:
[1875]171         std::set<CContextClient*> sendAxisToCouplerOut_done_ ;
172   
173      public:
174         void makeAliasForCoupling(const string& fieldId, int posInGrid) ;
175
176      private:
[1870]177         void sendAttributes(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid,
[1875]178                             CServerDistributionDescription::ServerDistributionType distType, const string& axisId="");
[1870]179         void sendDistributionAttribute(CContextClient* client, const std::vector<int>& globalDim, int orderPositionInGrid,
[1875]180                                        CServerDistributionDescription::ServerDistributionType distType, const string& axisId="");
[1869]181         
[595]182
[1875]183         void sendNonDistributedAttributes(CContextClient* client, const string& axisId="");
[1930]184         void sendDistributedAttributes_old(CContextClient* client, const string& axisId="");
[619]185
[1025]186         static void recvNonDistributedAttributes(CEventServer& event);
[1930]187         static void recvDistributedAttributes_old(CEventServer& event);
[1235]188         static void recvDistributionAttribute(CEventServer& event);
[1025]189         void recvNonDistributedAttributes(int rank, CBufferIn& buffer);
[1930]190         void recvDistributedAttributes_old(vector<int>& rank, vector<CBufferIn*> buffers);
[1235]191         void recvDistributionAttribute(CBufferIn& buffer);
[1025]192
[621]193         void setTransformations(const TransMapTypes&);
[676]194
[567]195      private:
[1345]196
[1875]197/** Clients that have to send a axis. There can be multiple clients in case of secondary server, otherwise only one client. */
[1353]198         std::list<CContextClient*> clients;
199         std::set<CContextClient*> clientsSet;
[1345]200
[1875]201      private:
[1869]202         /** define if the axis is completed or not ie all attributes have been received before in case
203             of grid reading from file or coupling */ 
204         bool isCompleted_=true ; 
[1875]205      public:     
206         /*!
207           \brief Check if a axis is completed
208           Before make any axis processing, we must be sure that all axis informations have
209           been sent, for exemple when reading a grid in a file or when grid elements are sent by an
210           other context (coupling). So all direct reference of the axis (axis_ref) must be also completed
211           \return true if axis and axis reference are completed
212          */
213         bool isCompleted(void)
214         {
215           if (hasDirectAxisReference()) if (!getDirectAxisReference()->isCompleted()) return false;
216           else return isCompleted_ ;
217         }
218         void setCompleted(void) { isCompleted_=true ; }
219         void unsetCompleted(void) { isCompleted_=false ; }
220     
221      private:
[219]222         bool isChecked;
[567]223         bool areClientAttributesChecked_;
[927]224         bool isClientAfterTransformationChecked;
[676]225         std::set<StdString> relFiles, relFilesCompressed;
[1143]226         TransMapTypes transformationMap_;         
[1869]227
[1337]228         std::map<int, map<int,int> > nbSenders; // Mapping of number of communicating client to a server
[1542]229         std::map<int, std::unordered_map<int, vector<size_t> > > indSrv_; // Global index of each client sent to server
[1236]230         // std::map<int, vector<int> > indWrittenSrv_; // Global written index of each client sent to server
[1542]231         std::unordered_map<size_t,size_t> globalLocalIndexMap_;
[1249]232         std::map<int,int> numberWrittenIndexes_, totalNumberWrittenIndexes_, offsetWrittenIndexes_;
233         std::map<int, CArray<int, 1> > compressedIndexToWriteOnServer;
[1337]234         std::map<int, std::vector<int> > connectedServerRank_;
[1235]235         bool computedWrittenIndex_;                 
[1099]236
[836]237       private:
238         static bool initializeTransformationMap(std::map<StdString, ETranformationType>& m);
239         static std::map<StdString, ETranformationType> transformationMapList_;
240         static bool dummyTransformationMapList_;
241
[1918]242
[1930]243       //////////////////////////////////////////////////////////////////////////////////////
244       //  this part is related to distribution, element definition, views and connectors  //
245       //////////////////////////////////////////////////////////////////////////////////////
[1918]246         
247        private:
248         CLocalElement* localElement_ = nullptr ;
249         void initializeLocalElement(void) ;
250        public: 
251         CLocalElement* getLocalElement(void) { if (localElement_==nullptr) initializeLocalElement() ; return localElement_ ; }
252         CLocalView* getLocalView(CElementView::type type) { return getLocalElement()->getView(type) ;}
253        private:
254         void addFullView(void) ;
255         void addWorkflowView(void) ;
256         void addModelView(void) ;
257
258        private:
259         CLocalConnector* modelToWorkflowConnector_ ;
260         void computeModelToWorkflowConnector(void)  ;
261        public:
262         CLocalConnector* getModelToWorkflowConnector(void) { if (modelToWorkflowConnector_==nullptr) computeModelToWorkflowConnector() ; return modelToWorkflowConnector_ ;}
[1930]263       
264       public:
265         void computeRemoteElement(CContextClient* client, EDistributionType) ;
[1956]266         void distributeToServer(CContextClient* client, std::map<int, CArray<size_t,1>>& globalIndex, CScattererConnector* &scattererConnector,
267                                 const string& axisId="") ;
[1918]268
[1930]269         static void recvAxisDistribution(CEventServer& event) ;
270         void receivedAxisDistribution(CEventServer& event, int phasis) ;
[1943]271         void setServerMask(CArray<bool,1>& serverMask, CContextClient* client ) ;
[1930]272         void sendDistributedAttributes(CContextClient* client, CScattererConnector& scattererConnector, const string& axisId) ;
273         static void recvDistributedAttributes(CEventServer& event) ;
274         void recvDistributedAttributes(CEventServer& event, const string& type) ;
275       private:
276         map<CContextClient*, CDistributedElement*> remoteElement_ ;
277       public: 
278         CDistributedElement* getRemoteElement(CContextClient* client) {return remoteElement_[client] ;}
279       private:
280         map<CContextClient*, CScattererConnector*> clientToServerConnector_ ;
281       public: 
282         CScattererConnector* getClientToServerConnector(CContextClient* client) { return clientToServerConnector_[client] ;}
283       private:
284         CGathererConnector*  gathererConnector_ ;
[1943]285       public:
286         CGathererConnector* getGathererConnector(void) { return gathererConnector_ ;}
287       private:
[1930]288         CGathererConnector* serverFromClientConnector_ ;
289         CDistributedElement* elementFrom_ ;
290       public:
291        CGathererConnector* getServerFromClientConnector(void) { return serverFromClientConnector_ ;}
292
[1934]293       private:
294         CScattererConnector*  serverToClientConnector_ = nullptr ;
295       public: 
296         CScattererConnector* getServerToClientConnector(void) { return serverToClientConnector_ ;} 
[1930]297
[1934]298       private:
299          map<CContextClient*,CGathererConnector*>  clientFromServerConnector_  ;
300       public: 
301         CGathererConnector* getClientFromServerConnector(CContextClient* client) { return clientFromServerConnector_[client] ;} 
[1930]302
[540]303         DECLARE_REF_FUNC(Axis,axis)
[219]304   }; // class CAxis
305
306   ///--------------------------------------------------------------
307
308   // Declare/Define CAxisGroup and CAxisDefinition
309   DECLARE_GROUP(CAxis);
[335]310} // namespace xios
[219]311
[591]312#endif // __XIOS_CAxis__
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