source: XIOS/dev/branch_yushan/extern/remap/src/mapper.hpp @ 1085

Last change on this file since 1085 was 1053, checked in by yushan, 8 years ago

ep_lib namespace specified when netcdf involved

File size: 2.7 KB
Line 
1#ifndef  __MAPPER_HPP__
2#define __MAPPER_HPP__
3#include "parallel_tree.hpp"
4#include "mpi.hpp"
5
6#ifdef _usingEP
7#include "ep_declaration.hpp"
8#endif
9
10namespace sphereRemap {
11
12enum verbosity
13{
14       SILENT = 0,
15       PROGRESS = 1,
16       DETAILS = 2
17};
18
19void cptOffsetsFromLengths(const int *lengths, int *offsets, int sz);
20
21class Mapper
22{
23public:
24       Mapper(ep_lib::MPI_Comm comm=MPI_COMM_WORLD) : communicator(comm), verbose(SILENT), neighbourElements(NULL), sstree(comm) {}
25       ~Mapper();
26       void setVerbosity(verbosity v) {verbose=v ;}
27
28       void setSourceMesh(const double* boundsLon, const double* boundsLat, int nVertex, int nbCells, const double* pole, const long int* globalId=NULL) ;
29       void setTargetMesh(const double* boundsLon, const double* boundsLat, int nVertex, int nbCells, const double* pole, const long int* globalId=NULL) ;
30       void setSourceValue(const double* val) ;
31       void getTargetValue(double* val) ;
32
33       double buildSSTree(vector<Node>& srcMsh, vector<Node>& trgMsh)
34       {
35         sstree.build(srcMsh, trgMsh);
36       }
37
38       /** @param trgElts are the elements of the unstructured target grid
39           Returns the timings for substeps: */
40       vector<double> computeWeights(int interpOrder, bool renormalize=false);
41       int getNbWeights(void) { return nWeights ; }
42/*
43       void getWeigths(double* weights, double* sourceInd, double* targetInd) ;
44       void getWeights(vector<double>& weights, vector<double>& sourceInd, vector<double>& targetInd) ;
45*/
46       /* where weights are returned after call to `computeWeights` */
47       double *remapMatrix;
48       int *srcAddress;
49       int *srcRank;
50       int *dstAddress;
51       int nWeights;
52       long int* sourceWeightId ;
53       long int* targetWeightId ;
54
55private:
56       /** @return number of weights (local to cpu) */
57       int remap(Elt* elements, int nbElements, int order, bool renormalize=false);
58
59       void buildMeshTopology();
60       void computeGrads();
61       void computeIntersection(Elt* elements, int nbElements);
62
63       int verbose;
64
65       /** Holds adaptional leaf nodes as ghost cells for gradient computations (hold neighbour elements from other ranks).
66           They will be inserted to the local trees but not saved in its leaf array */
67       vector<Node> neighbourNodes;
68
69       int nbNeighbourElements;
70       Elt* neighbourElements;
71
72       CParallelTree sstree;
73       ep_lib::MPI_Comm communicator ;
74       std::vector<Elt>  sourceElements ;
75       std::vector<Node> sourceMesh ;
76       std::vector<Elt>  targetElements ;
77       std::vector<Node> targetMesh ;
78       std::vector<long> sourceGlobalId ;
79       std::vector<long> targetGlobalId ;
80
81};
82
83}
84#endif
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