[591] | 1 | #ifndef __XIOS_CDomain__ |
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| 2 | #define __XIOS_CDomain__ |
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[219] | 3 | |
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[591] | 4 | /// XIOS headers /// |
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| 5 | #include "xios_spl.hpp" |
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[219] | 6 | #include "group_factory.hpp" |
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| 7 | |
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| 8 | #include "declare_group.hpp" |
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[540] | 9 | #include "declare_ref_func.hpp" |
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[300] | 10 | #include "event_client.hpp" |
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| 11 | #include "event_server.hpp" |
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| 12 | #include "buffer_in.hpp" |
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[369] | 13 | #include "array_new.hpp" |
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| 14 | #include "attribute_array.hpp" |
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[449] | 15 | #include "attribute_enum.hpp" |
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[631] | 16 | #include "transformation.hpp" |
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| 17 | #include "transformation_enum.hpp" |
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[1025] | 18 | #include "server_distribution_description.hpp" |
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[878] | 19 | #include "mesh.hpp" |
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| 20 | |
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[335] | 21 | namespace xios { |
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[509] | 22 | |
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[219] | 23 | /// ////////////////////// Déclarations ////////////////////// /// |
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| 24 | |
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| 25 | class CDomainGroup; |
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| 26 | class CDomainAttributes; |
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| 27 | class CDomain; |
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[878] | 28 | class CFile; |
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[219] | 29 | |
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| 30 | ///-------------------------------------------------------------- |
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| 31 | |
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| 32 | // Declare/Define CDomainAttribute |
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| 33 | BEGIN_DECLARE_ATTRIBUTE_MAP(CDomain) |
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| 34 | # include "domain_attribute.conf" |
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[775] | 35 | # include "domain_attribute_private.conf" |
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[219] | 36 | END_DECLARE_ATTRIBUTE_MAP(CDomain) |
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| 37 | |
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| 38 | ///-------------------------------------------------------------- |
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| 39 | |
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| 40 | class CDomain |
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| 41 | : public CObjectTemplate<CDomain> |
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| 42 | , public CDomainAttributes |
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| 43 | { |
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[1158] | 44 | /// typedef /// |
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| 45 | typedef CObjectTemplate<CDomain> SuperClass; |
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| 46 | typedef CDomainAttributes SuperClassAttribute; |
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| 47 | public: |
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[300] | 48 | enum EEventId |
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| 49 | { |
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[1025] | 50 | EVENT_ID_INDEX, EVENT_ID_LON, EVENT_ID_LAT, |
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| 51 | EVENT_ID_AREA, EVENT_ID_MASK, |
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[1236] | 52 | EVENT_ID_DATA_INDEX, EVENT_ID_SERVER_ATTRIBUT |
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[300] | 53 | } ; |
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[509] | 54 | |
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[676] | 55 | public: |
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[219] | 56 | |
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| 57 | typedef CDomainAttributes RelAttributes; |
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| 58 | typedef CDomainGroup RelGroup; |
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[631] | 59 | typedef CTransformation<CDomain>::TransformationMapTypes TransMapTypes; |
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[219] | 60 | |
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| 61 | /// Constructeurs /// |
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| 62 | CDomain(void); |
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| 63 | explicit CDomain(const StdString & id); |
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| 64 | CDomain(const CDomain & domain); // Not implemented yet. |
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| 65 | CDomain(const CDomain * const domain); // Not implemented yet. |
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| 66 | |
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[622] | 67 | static CDomain* createDomain(); |
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[878] | 68 | |
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| 69 | CMesh* mesh; |
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[924] | 70 | void assignMesh(const StdString, const int); |
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[878] | 71 | |
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[631] | 72 | virtual void parse(xml::CXMLNode & node); |
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| 73 | |
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[1345] | 74 | void setContextClient(CContextClient* contextClient); |
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| 75 | |
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[219] | 76 | /// Vérifications /// |
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| 77 | void checkAttributes(void); |
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[509] | 78 | void checkAttributesOnClient(); |
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[657] | 79 | void checkAttributesOnClientAfterTransformation(); |
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[676] | 80 | void checkEligibilityForCompressedOutput(void); |
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| 81 | |
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[509] | 82 | void sendCheckedAttributes(); |
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| 83 | |
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[631] | 84 | bool hasTransformation(); |
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| 85 | void solveInheritanceTransformation(); |
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| 86 | TransMapTypes getAllTransformations(); |
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[687] | 87 | void redistribute(int nbLocalDomain); |
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[823] | 88 | void duplicateTransformation(CDomain*); |
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[836] | 89 | CTransformation<CDomain>* addTransformation(ETranformationType transType, const StdString& id=""); |
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[631] | 90 | |
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[1158] | 91 | public: |
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| 92 | const std::set<StdString> & getRelFiles(void) const; |
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[219] | 93 | bool IsWritten(const StdString & filename) const; |
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[676] | 94 | bool isWrittenCompressed(const StdString& filename) const; |
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[1144] | 95 | |
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[1249] | 96 | int getNumberWrittenIndexes(MPI_Comm writtenCom); |
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| 97 | int getTotalNumberWrittenIndexes(MPI_Comm writtenCom); |
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| 98 | int getOffsetWrittenIndexes(MPI_Comm writtenCom); |
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| 99 | CArray<int,1>& getCompressedIndexToWriteOnServer(MPI_Comm writtenCom); |
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[676] | 100 | |
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[1330] | 101 | std::map<int, StdSize> getAttributesBufferSize(CContextClient* client, bool bufferForWriting = false); |
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[731] | 102 | |
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[219] | 103 | bool isEmpty(void) const; |
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[594] | 104 | bool isDistributed(void) const; |
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[1025] | 105 | bool isCompressible(void) const; |
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| 106 | |
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[1158] | 107 | std::vector<int> getNbGlob(); |
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| 108 | bool isEqual(CDomain* domain); |
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[1236] | 109 | |
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| 110 | static bool dispatchEvent(CEventServer& event); |
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| 111 | |
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[676] | 112 | public: |
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[219] | 113 | /// Mutateur /// |
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| 114 | void addRelFile(const StdString & filename); |
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[1236] | 115 | void addRelFileCompressed(const StdString& filename); |
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| 116 | |
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[1129] | 117 | void computeWrittenIndex(); |
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[1249] | 118 | void computeWrittenCompressedIndex(MPI_Comm); |
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[821] | 119 | |
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| 120 | void AllgatherRectilinearLonLat(CArray<double,1>& lon, CArray<double,1>& lat, |
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[809] | 121 | CArray<double,1>& lon_g, CArray<double,1>& lat_g); |
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[821] | 122 | |
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| 123 | void fillInRectilinearBoundLonLat(CArray<double,1>& lon, CArray<double,1>& lat, |
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[809] | 124 | CArray<double,2>& boundsLon, CArray<double,2>& boundsLat); |
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[1158] | 125 | |
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| 126 | void fillInLonLat(); |
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| 127 | bool distributionAttributesHaveValue() const; |
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[611] | 128 | |
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[1215] | 129 | size_t getGlobalWrittenSize() ; |
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[219] | 130 | /// Destructeur /// |
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| 131 | virtual ~CDomain(void); |
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| 132 | |
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| 133 | /// Accesseurs statiques /// |
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| 134 | static StdString GetName(void); |
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| 135 | static StdString GetDefName(void); |
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[509] | 136 | |
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[1236] | 137 | static ENodeType GetType(void); |
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| 138 | |
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| 139 | public: |
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| 140 | CArray<double, 1> lonvalue, latvalue; |
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| 141 | CArray<double, 2> bounds_lonvalue, bounds_latvalue; |
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| 142 | CArray<double, 1> areavalue; |
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| 143 | |
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[1624] | 144 | CArray<int,1> localIndexToWriteOnServer; |
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[1236] | 145 | |
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[1311] | 146 | CArray<bool, 1> domainMask; // mask_1d, mask_2d -> domainMask |
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| 147 | CArray<bool, 1> localMask; // domainMask + indexing |
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[384] | 148 | bool isCurvilinear ; |
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[449] | 149 | bool hasBounds ; |
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[611] | 150 | bool hasArea; |
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[665] | 151 | bool hasLonLat; |
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[953] | 152 | bool hasPole ; |
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[1855] | 153 | bool hasLatInReadFile_ ; // specify if latitude is defined on read file, so it can be read later when grid distribution will be defined |
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| 154 | bool hasBoundsLatInReadFile_ ; // specify if latitude boundarues are defined on read file, so it can be read later when grid distribution will be defined |
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| 155 | bool hasLonInReadFile_ ; // specify if longitude is defined on read file, so it can be read later when grid distribution will be defined |
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| 156 | bool hasBoundsLonInReadFile_ ; // specify if longitude boundaries are defined on read file, so it can be read later when grid distribution will be defined |
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[953] | 157 | |
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[1291] | 158 | void computeLocalMask(void) ; |
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[631] | 159 | private: |
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[667] | 160 | void checkDomain(void); |
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| 161 | void checkLocalIDomain(void); |
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| 162 | void checkLocalJDomain(void); |
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| 163 | |
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| 164 | void checkMask(void); |
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| 165 | void checkDomainData(void); |
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| 166 | void checkCompression(void); |
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| 167 | |
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| 168 | void checkBounds(void); |
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| 169 | void checkArea(void); |
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| 170 | void checkLonLat(); |
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[821] | 171 | void checkZoom(void); |
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[667] | 172 | |
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[1025] | 173 | void setTransformations(const TransMapTypes&); |
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[1158] | 174 | void computeNGlobDomain(); |
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[1025] | 175 | void sendAttributes(); |
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[665] | 176 | void sendIndex(); |
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[1025] | 177 | void sendDistributionAttributes(); |
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| 178 | void sendMask(); |
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[665] | 179 | void sendArea(); |
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[1236] | 180 | void sendLonLat(); |
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[1025] | 181 | void sendDataIndex(); |
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[1129] | 182 | void convertLonLatValue(); |
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[1158] | 183 | void fillInRectilinearLonLat(); |
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| 184 | void fillInCurvilinearLonLat(); |
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| 185 | void fillInUnstructuredLonLat(); |
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[1236] | 186 | |
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| 187 | static void recvDistributionAttributes(CEventServer& event); |
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| 188 | static void recvIndex(CEventServer& event); |
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| 189 | static void recvIndexZoom(CEventServer& event); |
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| 190 | static void recvMask(CEventServer& event); |
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| 191 | static void recvLon(CEventServer& event); |
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| 192 | static void recvLat(CEventServer& event); |
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| 193 | static void recvArea(CEventServer& event); |
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| 194 | static void recvDataIndex(CEventServer& event); |
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| 195 | void recvDistributionAttributes(CBufferIn& buffer); |
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| 196 | void recvIndex(std::map<int, CBufferIn*>& rankBuffers); |
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| 197 | void recvMask(std::map<int, CBufferIn*>& rankBuffers); |
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| 198 | void recvLon(std::map<int, CBufferIn*>& rankBuffers); |
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| 199 | void recvLat(std::map<int, CBufferIn*>& rankBuffers); |
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| 200 | void recvArea(std::map<int, CBufferIn*>& rankBuffers); |
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| 201 | void recvDataIndex(std::map<int, CBufferIn*>& rankBuffers); |
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| 202 | |
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| 203 | void completeLonLatClient(void); |
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| 204 | void computeConnectedClients(); |
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| 205 | |
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[1025] | 206 | private: |
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[1345] | 207 | |
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| 208 | /** Clients that have to send a domain. There can be multiple clients in case of secondary server, otherwise only one client. */ |
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[1353] | 209 | std::list<CContextClient*> clients; |
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| 210 | std::set<CContextClient*> clientsSet; |
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[1345] | 211 | |
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[1099] | 212 | bool doZoomByIndex_; |
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[1129] | 213 | bool isChecked, computedWrittenIndex_; |
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[676] | 214 | std::set<StdString> relFiles, relFilesCompressed; |
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[551] | 215 | bool isClientChecked; // Verify whether all attributes of domain on the client side are good |
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[657] | 216 | bool isClientAfterTransformationChecked; |
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[1236] | 217 | std::map<int, CArray<int,1> > indGlob_; |
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[1337] | 218 | std::map<int, map<int,int> > nbSenders; // Mapping of number of communicating client to a server |
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[1025] | 219 | |
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[1337] | 220 | /** Global index of each client sent to server: map<serverSize, map<serverRank, indexes>> */ |
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| 221 | std::map<int, boost::unordered_map<int, vector<size_t> > > indSrv_; |
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[1236] | 222 | // std::map<CContextClient*, std::map<int, vector<int> > > indWrittenSrv_; // Global written index of each client sent to server |
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[676] | 223 | std::vector<int> indexesToWrite; |
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[1236] | 224 | std::vector<int> recvClientRanks_; |
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[1249] | 225 | std::map<int,int> numberWrittenIndexes_, totalNumberWrittenIndexes_, offsetWrittenIndexes_; |
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| 226 | std::map<int, CArray<int, 1> > compressedIndexToWriteOnServer; |
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[1337] | 227 | std::map<int, std::map<int,size_t> > connectedDataSize_; |
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| 228 | std::map<int, std::vector<int> > connectedServerRank_; |
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[1236] | 229 | |
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[676] | 230 | //! True if and only if the data defined on the domain can be outputted in a compressed way |
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| 231 | bool isCompressible_; |
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[715] | 232 | bool isRedistributed_; |
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[1025] | 233 | TransMapTypes transformationMap_; |
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[657] | 234 | bool isUnstructed_; |
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[1236] | 235 | boost::unordered_map<size_t,size_t> globalLocalIndexMap_; |
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[953] | 236 | |
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[836] | 237 | private: |
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| 238 | static bool initializeTransformationMap(std::map<StdString, ETranformationType>& m); |
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| 239 | static std::map<StdString, ETranformationType> transformationMapList_; |
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| 240 | static bool _dummyTransformationMapList; |
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| 241 | |
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[540] | 242 | DECLARE_REF_FUNC(Domain,domain) |
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| 243 | |
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[219] | 244 | }; // class CDomain |
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| 245 | |
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| 246 | ///-------------------------------------------------------------- |
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| 247 | |
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| 248 | // Declare/Define CDomainGroup and CDomainDefinition |
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| 249 | DECLARE_GROUP(CDomain); |
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| 250 | |
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| 251 | ///-------------------------------------------------------------- |
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| 252 | |
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[335] | 253 | } // namespace xios |
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[219] | 254 | |
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[878] | 255 | #endif //__XIOS_CDomain__ |
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