Changes between Version 8 and Version 9 of DocBenvAidrisAada

Timestamp:

12/08/14 15:49:30 (10 years ago)

Author:

mafoipsl

Comment:

--

DocBenvAidrisAada

@@ -56 +56 @@
 # @ job_type = parallel
 # Standard output file
-# @ output = Script_Output_test
+# @ output = Script_Output_test.$(jobid)
 # Error output file (the same)
-# @ error = Script_Output_test
+# @ error = Script_Output_test.$(jobid)
 # Number of requested processes
 # @ total_tasks = 8
@@ -81 +81 @@
 
 Ergon files are visible from Adapp. Use $ARCHIVE to reach Ergon files. 
+
+# Job Header for MPI - MPI/OMP with libIGCM # 
+## Forced model ## 
+### MPI ###
+To launch a job on XXX MPI tasks
+{{{
+#!/bin/ksh
+# ######################
+# ##   ADA IDRIS   ##
+# ######################
+# Job name 
+# @ job_name = MyJob
+# Job type
+# @ job_type = parallel
+# Standard output file name
+# @ output = Script_Output_MyJob.000001
+# Error output file name
+# @ error = Script_Output_MyJob.000001
+# Total number of tasks
+# @ total_tasks = XXX
+# @ environment = "BATCH_NUM_PROC_TOT=XXX"
+# Maximum CPU time per task hh:mm:ss
+# @ wall_clock_limit = 1:00:00
+# End of the header options
+# @ queue
+}}}
+
+
+### hybrid MPI-OMP ###
+[[NoteBox(note,Hybrid version are only available with _v6 configurations, 600px)]]
+
+To launch a job on XXX MPI tasks and YYY threads OMP on each task 
+* first you need to modify your config.card
+{{{
+ATM= (gcm.e, lmdz.x, XXXMPI, YYYOMP)
+}}}
+* second  you need to modify your job header
+{{{
+#!/bin/ksh
+# ######################
+# ##   ADA IDRIS   ##
+# ######################
+# Job name 
+# @ job_name = MyJob
+# Job type
+# @ job_type = parallel
+# Standard output file name
+# @ output = Script_Output_MyJob.000001
+# Error output file name
+# @ error = Script_Output_MyJob.000001
+# Total number of tasks
+# @ total_tasks = XXX
+# @ environment = "BATCH_NUM_PROC_TOT=XXX*YYY"
+# Maximum CPU time per task hh:mm:ss
+# @ wall_clock_limit = 1:00:00
+# Specific option for OpenMP parallelization: Number of OpenMP threads per MPI task
+# @ parallel_threads = YYY
+# End of the header options
+# @ queue
+}}}
+
+
+## Coupled model ##
+### MPI ###
+To launch a job on XXX (32) MPI tasks. 5 for NEMO, 1 for oasis and 26 MPI tasks for LMDZ by default for IPSLCM5A.
+{{{
+#!/bin/ksh
+# ######################
+# ##  ADA       IDRIS ##
+# ######################
+# Job name 
+# @ job_name = MyCoupledJob
+# Job type
+# @ job_type = parallel
+# Standard output file name
+# @ output = Script_Output_MyCoupledJob.000001
+# Error output file name
+# @ error = Script_Output_MyCoupledJob.000001
+# Total number of tasks
+# @ total_tasks = 32
+# @ environment = "BATCH_NUM_PROC_TOT=32"
+# Maximum CPU time per task hh:mm:ss
+# @ wall_clock_limit = 1:00:00
+# End of the header options
+# @ queue
+}}}
+
+
+### hybrid MPI-OMP ###
+[[NoteBox(note,Hybrid version are only available with _v6 configurations, 600px)]]
+
+To launch a job on XXX (24) MPI tasks and YYY (2) threads OMP for LMDZ, ZZZ (7) MPI tasks for NEMO and SSS (1) XIOS servers :
+
+* first you need to modify your config.card. On ada, this is working for IPSLCM6_rc0 (IPSLCM6A_VLR) :
+{{{
+ATM= (gcm.e, lmdz.x, 24MPI, 2OMP)
+SRF= ("" ,"" )
+SBG= ("" ,"" )
+OCE= (opa, opa.xx  , 7MPI)
+ICE= ("" ,"" )
+MBG= ("" ,"" )
+CPL= ("", "" )
+IOS= (xios_server.exe, xios.x, 1MPI)
+}}}
+* second  you need to modify your job header
+{{{
+#!/bin/ksh
+# ######################
+# ##   ADA IDRIS   ##
+# ######################
+# Job name 
+# @ job_name = MyCoupledJob
+# Job type
+# @ job_type = parallel
+# Standard output file name
+# @ output = Script_Output_MyCoupledJob.000001
+# Error output file name
+# @ error = Script_Output_MyCoupledJob.000001
+# Total number of tasks
+# @ total_tasks = 32
+# @ environment = "BATCH_NUM_PROC_TOT=56"
+# Maximum CPU time per task hh:mm:ss
+# @ wall_clock_limit = 1:00:00
+# Specific option for OpenMP parallelization: Number of OpenMP threads per MPI task
+# @ parallel_threads = 2
+# End of the header options
+# @ queue
+}}}
+
 
 ## Specificities libIGCM on Ada ##