Changes between Version 13 and Version 14 of Documentation/TrunkFunctionality4


Ignore:
Timestamp:
2020-03-09T14:08:05+01:00 (4 years ago)
Author:
luyssaert
Comment:

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  • Documentation/TrunkFunctionality4

    v13 v14  
    131131 
    132132 
    133  
    134  
    135 ++++ CONTINUE CHECKING +++++ 
    136  
    137 === Croplands (CHECK) === 
    138 Makes use of sapiens_planting and sapiens_harvest. Harvest goes into harvest_pool (just like wood) and its decomposition is accounted for in the fluxes from the product use pool. 
     133=== Croplands (r6614) === 
     134Makes use of crop_planting and crop_harvest in the module sapiens_agriculture. Harvest goes into harvest_pool (just like wood) and its decomposition is accounted for in the fluxes from the product use pool. 
     135 
    139136 
    140137=== CWRR vs Choinel (r6614) === 
     
    142139 
    143140 
     141++++ CONTINUE CHECKING +++++ 
    144142=== Diameter classes (CHECK) === 
    145143Diameter classes were introduced to better simulate the canopy structure, they are a tool to simulate heterogeneity within a single PFT. Given that the canopy is the interface between the land and the atmosphere this feature has effects well beyond forest management. Stand structure was observed to affect albedo, transpiration, photosynthesis, soil temperature, roughness length, and recruitment. Using diameter classes adds very little complexity to setting-up the simulations as well as to the output files. The complexity is mostly within the code.  
     
    298296++++++++++++ 
    299297 
    300 === Pseudo sugar loading (CHECK) === 
    301 The model code does not control the C/N ratio of the labile pool hence, even if there is a strong N-limitation, the model can accumulate lots of carbon in the labile pool. The first CN-version was indeed doing this as the plant could easily store several 1000 gC m-2. As this was considered unrealistic, the excess C in the labile pool was burned-off by some excess respiration. Although this luxury/wastage respiration has been suggested in the literature (see Amthor et al 2000 and Chamber et al 2004) it is not confirmed by many observations. It was therefore decided to control the size of the labile pool. The model already had an estimate of the optimal pool size of the labile and carbres pools. If the plant has more labile carbon than the optimal, GPP is downregulated (too much sugars in the leaves will increase the viscosity and hamper the sapflow in the phloem. The viscosity can be decreased again by closing the stomata and transpiring less of the sapflow in the xylem. By closing the stomata, GPP will be downregulated. See Holtta et al 2017 doi:10.1093/treephys/tpx011). Because ORCHIDEE has no sapflow, turgor and viscosity yet, we used a simple ratio to downregulate NUE. Hence, the feature was called '''pseudo sugar loading''' to make clear this is not the real thing yet. 
     298 
     299++++DONE CHECKING++++ 
     300 
     301 
     302=== Pseudo sugar loading (r6614) === 
     303The model code does not control the C/N ratio of the labile pool hence, even if there is a strong N-limitation, the model can accumulate lots of carbon in the labile pool. The first CN-version was indeed doing this as the plant could easily store several 1000 gC m-2. As this was considered unrealistic, the excess C in the labile pool was burned-off by some excess respiration. Although this luxury/wastage respiration has been suggested in the literature (see Amthor et al 2000 and Chamber et al 2004) it is not confirmed by many observations. It was therefore decided to control the size of the labile pool. The model already had an estimate of the optimal pool size of the labile and carbres pools. If the plant has more labile carbon than the optimal, GPP is downregulated because too much sugars in the leaves will increase the viscosity and hamper the sapflow in the phloem. The viscosity can be decreased again by closing the stomata and transpiring less of the sapflow in the xylem. By closing the stomata, GPP will be downregulated (Holtta et al 2017 doi:10.1093/treephys/tpx011). Because ORCHIDEE has no sapflow, turgor and viscosity yet, we used a simple ratio to downregulate NUE. Hence, the feature was called '''pseudo sugar loading''' to make clear this is not the real thing yet. 
    302304 
    303305The regulation is smoothened by setting boundaries to avoid sudden decreases in GPP (which are not apparent in the data). Smoothing is taken care of in stomate_vmax.f90. If the plant has less carbon in its labile and carbres pools than wanted, the NUE is upregulated. Up regulation is also capped to avoid crazy NUE values and high frequency changes between up and downregulation. Up and downregulation are done in stomate_vmax.f90. The parameters than control the smoothing are '''sugar_load_min''' and '''sugar_load_max''' and can be set in the run.def. 
     
    310312 
    311313Recruitment has been developed, tested and validated for tropical forests. There is no reason why it shouldn't work for other forests. Initial test for temperate regions show that it works there as well. Also forest productivity at higher ages seems relatively sensitive to recruitment. At present recruitment was introduced at the PFT level. It probably makes more sense to link it to the management strategy than to the PFT. This needs to be checked. 
    312  
    313  
    314  
    315 ++++DONE CHECKING++++ 
    316314 
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