source: branches/publications/ORCHIDEE_CAMEO_gmd_2022/orchidee.default @ 8205

Last change on this file since 8205 was 6607, checked in by josefine.ghattas, 4 years ago

Update of default values in comments and update of orchidee.default

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Line 
1#
2#
3#  WARNING !!!
4#  DO NOT MODIFY THIS FILE.
5#  THIS FILE IS ONLY PROVIDING INFORMATION ABOUT DEFAULT PARAMETER SETTINGS IN ORCHIDEE.
6#
7#*******************************************************************************************
8#                    Namelist for ORCHIDEE
9#*******************************************************************************************
10#
11#  For more details, see : http://forge.ipsl.jussieu.fr/orchidee/wiki/Documentation/OrchideeParameters
12#
13#  Note : [m] : meters; [K] : Kelvin degrees; [C] : Celsius degrees
14#
15
16#*******************************************************************************************
17#          ORCHIDEE driver parameters (read in Off-line mode only)
18#*******************************************************************************************
19
20# LWDOWN_CONS ([FLAG]) :  Conserve longwave downwelling radiation in the forcing        {}
21LWDOWN_CONS =  n
22
23# SWDOWN_CONS ([FLAG]) :  Conserve shortwave downwelling radiation in the forcing       {}
24SWDOWN_CONS =  LWDOWN_CONS
25
26# FORCING_FILE ([FILE] ) :  Name of file containing the forcing data    {[-]}
27FORCING_FILE =  forcing_file.nc
28
29# DT_SECHIBA ([seconds]) :  Time-step of the SECHIBA component  {NOT(WEATHERGEN)}
30DT_SECHIBA =  1800.
31
32# RESTART_FILEIN ([FILE]) :  Name of restart to READ for initial conditions     {[-]}
33RESTART_FILEIN =  NONE
34
35# RESTART_FILEOUT ([FILE]) :  Name of restart files to be created by the driver         {[-]}
36RESTART_FILEOUT =  driver_rest_out.nc
37
38# DRIVER_reset_time ([FLAG]) :  Overwrite time values from the driver restart file      {[-]}
39DRIVER_reset_time =  n
40
41# TIME_SKIP ([seconds, days, months, years]) :  Time in the forcing file at which the model is started.         {[-]}
42TIME_SKIP =  0
43
44# TIME_LENGTH ([seconds, days, months, years]) :  Length of the integration in time.    {[-]}
45TIME_LENGTH =  Full length of the forcing file 
46
47# RELAXATION ([FLAG]) :  method of forcing      {[-]}
48RELAXATION =  n
49
50# RELAX_A ([days?]) :  Time constant of the relaxation layer    {RELAXATION}
51RELAX_A =  1.0
52
53# SPRED_PREC ([-]) :  Spread the precipitation.         {[-]}
54SPRED_PREC =  Half of the forcing time step or uniform, depending on dt_force and dt_sechiba
55
56# ATM_CO2 ([ppm]) :  Value to precribe atmosoheric CO2  {[FORCE_CO2_VEG=y or Offline mode]}
57ATM_CO2 =  350.
58
59# CO2_varying ([y/n]) :  A flag to specify if CO2 level will vary within the simulation         {[FORCE_CO2_VEG=y or Offline mode]}
60CO2_varying =  .FALSE.
61
62# CO2_inc ([-]) :  Relative yearly increase of the CO2 level    {[FORCE_CO2_VEG=y or Offline mode]}
63CO2_inc =  1.
64
65# ALLOW_WEATHERGEN ([FLAG]) :  Allow weather generator to create data   {[-]}
66ALLOW_WEATHERGEN =  n
67
68# DT_WEATHGEN ([seconds]) :  Calling frequency of weather generator     {ALLOW_WEATHERGEN}
69DT_WEATHGEN =  1800.
70
71# LIMIT_WEST ([Degrees] ) :  Western limit of region    {[-]}
72LIMIT_WEST =  -180.
73
74# LIMIT_EAST ([Degrees] ) :  Eastern limit of region    {[-]}
75LIMIT_EAST =  180.
76
77# LIMIT_NORTH ([Degrees]) :  Northern limit of region   {[-]}
78LIMIT_NORTH =  90.
79
80# LIMIT_SOUTH ([Degrees]) :  Southern limit of region   {[-]}
81LIMIT_SOUTH =  -90.
82
83# MERID_RES ([Degrees]) :  North-South Resolution       {ALLOW_WEATHERGEN}
84MERID_RES =  2.
85
86# ZONAL_RES ([Degrees] ) :  East-West Resolution        {ALLOW_WEATHERGEN}
87ZONAL_RES =  2.
88
89# HEIGHT_LEV1 ([m]) :  Height at which T and Q are given        {offline mode}
90HEIGHT_LEV1 =  2.0
91
92# HEIGHT_LEVW ([m]) :  Height at which the wind is given        {offline mode}
93HEIGHT_LEVW =  10.0
94
95# NBUFF (-) :  Number of time steps of data to buffer between each reading of the forcing file  {OFF_LINE}
96NBUFF =  1
97
98# IPPREC ([-] ) :  Use prescribed values        {ALLOW_WEATHERGEN}
99IPPREC =  0
100
101# WEATHGEN_PRECIP_EXACT ([FLAG]) :  Exact monthly precipitation         {ALLOW_WEATHERGEN}
102WEATHGEN_PRECIP_EXACT =  n
103
104# DUMP_WEATHER ([FLAG]) :  Write weather from generator into a forcing file     {ALLOW_WEATHERGEN  }
105DUMP_WEATHER =  n
106
107# DUMP_WEATHER_FILE ([FILE]) :  Name of the file that contains the weather from generator       {DUMP_WEATHER}
108DUMP_WEATHER_FILE =  weather_dump.nc
109
110# DUMP_WEATHER_GATHERED ([FLAG]) :  Dump weather data on gathered grid  {DUMP_WEATHER}
111DUMP_WEATHER_GATHERED =  y
112
113# HEIGHT_LEV1_DUMP ([m]) :      {DUMP_WEATHER}
114HEIGHT_LEV1_DUMP =  10.
115
116#*******************************************************************************************
117#          ORCHIDEE parameters 
118#*******************************************************************************************
119
120# NC_RESTART_COMPRESSION  ([FLAG]) :  Restart netcdf outputs file are written in compression mode       {}
121NC_RESTART_COMPRESSION  =  n
122
123# SOILTYPE_CLASSIF ([-]) :  Type of classification used for the map of soil types       {!IMPOSE_VEG}
124SOILTYPE_CLASSIF =  zobler
125
126# RIVER_ROUTING ([FLAG]) :  Decides if we route the water or not        {OK_SECHIBA}
127RIVER_ROUTING =  y
128
129# DO_IRRIGATION ([FLAG]) :  Should we compute an irrigation flux        {RIVER_ROUTING }
130DO_IRRIGATION =  n
131
132# DO_FLOODPLAINS ([FLAG]  ) :  Should we include floodplains    {RIVER_ROUTING }
133DO_FLOODPLAINS =  n
134
135# OK_SOIL_CARBON_DISCRETIZATION ([FLAG]) :  Activate soil carbon vertical discretization        {OK_STOMATE}
136OK_SOIL_CARBON_DISCRETIZATION =  FALSE
137
138# STOMATE_OK_STOMATE ([FLAG]) :  Activate STOMATE?      {OK_SECHIBA}
139STOMATE_OK_STOMATE =  y
140
141# DO_WOOD_HARVEST ([FLAG]) :  Activate Wood Harvest ?   {OK_STOMATE}
142DO_WOOD_HARVEST =  y
143
144# STOMATE_OK_NCYCLE  ([FLAG] ) :  Activate dynamic N cycle      {OK_STOMATE }
145STOMATE_OK_NCYCLE  =  y 
146
147# STOMATE_IMPOSE_CN ([FLAG] ) :  Impose the CN ratio of leaves          {OK_STOMATE }
148STOMATE_IMPOSE_CN =  n 
149
150# RESET_IMPOSE_CN ([FLAG] ) :  Reset the CN ratio of leaves     {OK_STOMATE }
151RESET_IMPOSE_CN =  n 
152
153# STOMATE_READ_CN ([FLAG] ) :  Read the CN ratio of leaves      {OK_STOMATE }
154STOMATE_READ_CN =  n 
155
156# STOMATE_OK_DGVM ([FLAG]) :  Activate DGVM?    {OK_STOMATE}
157STOMATE_OK_DGVM =  n
158
159# CHEMISTRY_BVOC ([FLAG]) :  Activate calculations for BVOC     {OK_SECHIBA}
160CHEMISTRY_BVOC =  n
161
162# CHEMISTRY_LEAFAGE ([FLAG]) :  Activate LEAFAGE?       {CHEMISTRY_BVOC}
163CHEMISTRY_LEAFAGE =  n
164
165# CANOPY_EXTINCTION  ([FLAG]) :  Use canopy radiative transfer model?   {CHEMISTRY_BVOC }
166CANOPY_EXTINCTION  =  n
167
168# CANOPY_MULTILAYER ([FLAG]) :  Use canopy radiative transfer model with multi-layers   {CANOPY_EXTINCTION }
169CANOPY_MULTILAYER =  n
170
171# NOx_RAIN_PULSE ([FLAG]) :  Calculate NOx emissions with pulse?        {CHEMISTRY_BVOC }
172NOx_RAIN_PULSE =  n
173
174# NOx_BBG_FERTIL ([FLAG]) :  Calculate NOx emissions with bbg fertilizing effect?       {CHEMISTRY_BVOC }
175NOx_BBG_FERTIL =  n
176
177# NOx_FERTILIZERS_USE ([FLAG] ) :  Calculate NOx emissions with fertilizers use?        {CHEMISTRY_BVOC }
178NOx_FERTILIZERS_USE =  n
179
180# NVM ([-]) :  number of PFTs           {OK_SECHIBA or OK_STOMATE}
181NVM =  13
182
183# IMPOSE_PARAM ([FLAG]) :  Do you impose the values of the parameters?  {OK_SECHIBA or OK_STOMATE}
184IMPOSE_PARAM =  y
185
186# DEPTH_MAX_T (m) :  Maximum depth of the soil thermodynamics   {}
187DEPTH_MAX_T =  90.0
188
189# DEPTH_MAX_H (m) :  Maximum depth of soil moisture     {}
190DEPTH_MAX_H =  2.0
191
192# DEPTH_TOPTHICK (m) :  Thickness of upper most Layer   {}
193DEPTH_TOPTHICK =  9.77517107e-04
194
195# DEPTH_CSTTHICK (m) :  Depth at which constant layer thickness start   {}
196DEPTH_CSTTHICK =  DEPTH_MAX_H 
197
198# REFINEBOTTOM (-) :  Depth at which the hydrology layers will be refined towards the bottom.   {}
199REFINEBOTTOM =  .FALSE.
200
201# DEPTH_GEOM (m) :  Depth at which we resume geometrical increases for temperature      {}
202DEPTH_GEOM =  DEPTH_MAX_H 
203
204# RATIO_GEOM_BELOW (-) :  Ratio of the geometrical series defining the thickness below DEPTH_GEOM       {}
205RATIO_GEOM_BELOW =  2
206
207# ALMA_OUTPUT ([FLAG]) :  Should the output follow the ALMA convention  {OK_SECHIBA}
208ALMA_OUTPUT =  n
209
210# OUTPUT_FILE ([FILE]) :  Name of file in which the output is going to be written       {OK_SECHIBA}
211OUTPUT_FILE =  sechiba_history.nc
212
213# WRITE_STEP ([seconds]) :  Frequency in seconds for sechiba_history.nc file with IOIPSL        {OK_SECHIBA, NOT XIOS_ORCHIDEE_OK}
214WRITE_STEP =  86400.
215
216# SECHIBA_HISTLEVEL ([-]) :  SECHIBA history output level (0..10)       {OK_SECHIBA and HF}
217SECHIBA_HISTLEVEL =  5
218
219# SECHIBA_HISTFILE2 ([FLAG]) :  Flag to switch on histfile 2 for SECHIBA (hi-frequency ?)       {OK_SECHIBA}
220SECHIBA_HISTFILE2 =  n
221
222# WRITE_STEP2 ([seconds]) :  Frequency in seconds at which to WRITE output      {SECHIBA_HISTFILE2}
223WRITE_STEP2 =  1800.0
224
225# SECHIBA_OUTPUT_FILE2 ([FILE]) :  Name of file in which the output number 2 is going to be written     {SECHIBA_HISTFILE2}
226SECHIBA_OUTPUT_FILE2 =  sechiba_out_2.nc
227
228# SECHIBA_HISTLEVEL2 ([-] ) :  SECHIBA history 2 output level (0..10)   {SECHIBA_HISTFILE2}
229SECHIBA_HISTLEVEL2 =  1
230
231# STOMATE_OUTPUT_FILE ([FILE]) :  Name of file in which STOMATE's output is going to be written         {OK_STOMATE}
232STOMATE_OUTPUT_FILE =  stomate_history.nc
233
234# STOMATE_HIST_DT ([days]) :  STOMATE history time step         {OK_STOMATE}
235STOMATE_HIST_DT =  10.
236
237# STOMATE_IPCC_OUTPUT_FILE ([FILE]) :  Name of file in which STOMATE's output is going to be written    {OK_STOMATE}
238STOMATE_IPCC_OUTPUT_FILE =  stomate_ipcc_history.nc
239
240# STOMATE_IPCC_HIST_DT ([days]) :  STOMATE IPCC history time step       {OK_STOMATE}
241STOMATE_IPCC_HIST_DT =  0.
242
243# OK_HISTSYNC ([FLAG]) :  Syncronize and write IOIPSL output files at each time step    {}
244OK_HISTSYNC =  FALSE
245
246# STOMATE_HISTLEVEL ([-]) :  STOMATE history output level (0..10)       {OK_STOMATE}
247STOMATE_HISTLEVEL =  10
248
249# SECHIBA_restart_in ([FILE]) :  Name of restart to READ for initial conditions         {OK_SECHIBA }
250SECHIBA_restart_in =  NONE
251
252# SECHIBA_rest_out ([FILE]) :  Name of restart files to be created by SECHIBA   {OK_SECHIBA}
253SECHIBA_rest_out =  sechiba_rest_out.nc
254
255# STOMATE_RESTART_FILEIN ([FILE]) :  Name of restart to READ for initial conditions of STOMATE  {STOMATE_OK_STOMATE}
256STOMATE_RESTART_FILEIN =  NONE
257
258# STOMATE_RESTART_FILEOUT ([FILE]) :  Name of restart files to be created by STOMATE    {STOMATE_OK_STOMATE}
259STOMATE_RESTART_FILEOUT =  stomate_rest_out.nc
260
261# FORCE_CO2_VEG ([FLAG]) :  Flag to force the value of atmospheric CO2 for vegetation.  {Only in coupled mode}
262FORCE_CO2_VEG =  FALSE
263
264# TAU_OUTFLOW ([days]) :  Number of days over which the coastal- and riverflow will be distributed      {Only in coupled mode}
265TAU_OUTFLOW =  0
266
267# ECCENTRICITY ([-]) :  Use prescribed values   {ALLOW_WEATHERGEN}
268ECCENTRICITY =  0.016724
269
270# PERIHELIE ([-]) :  Use prescribed values      {ALLOW_WEATHERGEN}
271PERIHELIE =  102.04
272
273# OBLIQUITY ([Degrees]) :  Use prescribed values        {ALLOW_WEATHERGEN}
274OBLIQUITY =  23.446
275
276# PFT_TO_MTC ([-]) :  correspondance array linking a PFT to MTC         {OK_SECHIBA or OK_STOMATE}
277PFT_TO_MTC =  1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
278
279# PFT_NAME ([-]) :  Name of a PFT       {OK_SECHIBA or OK_STOMATE}
280PFT_NAME =  bare ground, tropical broad-leaved evergreen, tropical broad-leaved raingreen, temperate needleleaf evergreen, temperate broad-leaved evergreen, temperate broad-leaved summergreen,  boreal needleleaf evergreen, boreal broad-leaved summergreen, boreal needleleaf summergreen,  C3 grass, C4 grass, C3 agriculture, C4 agriculture 
281
282# LEAF_TAB ([-] ) :  leaf type : 1      {OK_STOMATE}
283LEAF_TAB =  4, 1, 1, 2, 1, 1, 2, 1, 2, 3, 3, 3, 3 
284
285# PHENO_MODEL ([-] ) :  which phenology model is used? (tabulated)      {OK_STOMATE}
286PHENO_MODEL =  none, none, moi, none, none, ncdgdd, none, ncdgdd, ngd, moigdd, moigdd, moigdd, moigdd
287
288# SECHIBA_LAI ([m^2/m^2]) :  laimax for maximum lai(see also type of lai interpolation)         {OK_SECHIBA or IMPOSE_VEG}
289SECHIBA_LAI =  0., 8., 8., 4., 4.5, 4.5, 4., 4.5, 4., 2., 2., 2., 2.
290
291# LLAIMIN ([m^2/m^2]) :  laimin for minimum lai(see also type of lai interpolation)     {OK_SECHIBA or IMPOSE_VEG}
292LLAIMIN =  0., 8., 0., 4., 4.5, 0., 4., 0., 0., 0., 0., 0., 0.
293
294# SLOWPROC_HEIGHT ([m] ) :  prescribed height of vegetation     {OK_SECHIBA}
295SLOWPROC_HEIGHT =  0., 30., 30., 20., 20., 20., 15., 15., 15., .5, .6, 1., 1.
296
297# Z0_OVER_HEIGHT ([-] ) :  factor to calculate roughness height from height of canopy   {OK_SECHIBA}
298Z0_OVER_HEIGHT =  0., 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625
299
300# RATIO_Z0M_Z0H ([-]) :  Ratio between z0m and z0h      {OK_SECHIBA}
301RATIO_Z0M_Z0H =  1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0 
302
303# TYPE_OF_LAI ([-]) :  Type of behaviour of the LAI evolution algorithm         {OK_SECHIBA}
304TYPE_OF_LAI =  inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter
305
306# NATURAL ([BOOLEAN]) :  natural?       {OK_SECHIBA, OK_STOMATE}
307NATURAL =  y, y, y, y, y, y, y, y, y, y, y, n, n 
308
309# IS_C4 ([BOOLEAN]) :  flag for C4 vegetation types     {OK_SECHIBA or OK_STOMATE}
310IS_C4 =  n, n, n, n, n, n, n, n, n, n, n, y, n, y
311
312# VCMAX_FIX ([micromol/m^2/s] ) :  values used for vcmax when STOMATE is not activated  {OK_SECHIBA and NOT(OK_STOMATE)}
313VCMAX_FIX =  0., 40., 50., 30., 35., 40.,30., 40., 35., 60., 60., 70., 70.
314
315# DOWNREG_CO2 ([-]) :  coefficient for CO2 downregulation (unitless)    {}
316DOWNREG_CO2 =  0., 0.38, 0.38, 0.28, 0.28, 0.28, 0.22, 0.22, 0.22, 0.26, 0.26, 0.26, 0.26
317
318# E_KmC ([J mol-1]) :  Energy of activation for KmC     {}
319E_KmC =  -9999.,  79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430.
320
321# E_KmO ([J mol-1]) :  Energy of activation for KmO     {}
322E_KmO =  -9999., 36380.,  36380.,  36380.,  36380.,  36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380.
323
324# E_Sco ([J mol-1]) :  Energy of activation for Sco     {}
325E_Sco =  -9999., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460.
326
327# E_gamma_star ([J mol-1]) :  Energy of activation for gamma_star       {}
328E_gamma_star =  -9999., 37830.,  37830.,  37830.,  37830.,  37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830.
329
330# E_Vcmax ([J mol-1]) :  Energy of activation for Vcmax         {}
331E_Vcmax =  -9999., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 67300., 71513., 67300.
332
333# E_Jmax ([J mol-1]) :  Energy of activation for Jmax   {}
334E_Jmax =  -9999., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 77900., 49884., 77900. 
335
336# aSV ([J K-1 mol-1]) :  a coefficient of the linear regression (a+bT) defining the Entropy term for Vcmax      {}
337aSV =  -9999., 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 641.64, 668.39, 641.64 
338
339# bSV ([J K-1 mol-1 °C-1]) :  b coefficient of the linear regression (a+bT) defining the Entropy term for Vcmax        {}
340bSV =  -9999., -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, 0., -1.07, 0. 
341
342# TPHOTO_MIN ([-]) :  minimum photosynthesis temperature (deg C)        {OK_STOMATE}
343TPHOTO_MIN =  -9999.,  -4., -4., -4., -4.,-4.,-4., -4., -4., -4., -4., -4., -4.
344
345# TPHOTO_MAX ([-]) :  maximum photosynthesis temperature (deg C)        {OK_STOMATE}
346TPHOTO_MAX =  -9999., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55.
347
348# aSJ ([J K-1 mol-1]) :  a coefficient of the linear regression (a+bT) defining the Entropy term for Jmax       {}
349aSJ =  -9999., 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 630., 659.70, 630. 
350
351# bSJ ([J K-1 mol-1 °C-1]) :  b coefficient of the linear regression (a+bT) defining the Entropy term for Jmax         {}
352bSJ =  -9999., -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, 0., -0.75, 0. 
353
354# D_Vcmax ([J mol-1]) :  Energy of deactivation for Vcmax       {}
355D_Vcmax =  -9999., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 192000., 200000., 192000.
356
357# D_Jmax ([J mol-1]) :  Energy of deactivation for Jmax         {}
358D_Jmax =  -9999., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 192000., 200000., 192000.
359
360# E_gm  ([J mol-1] ) :  Energy of activation for gm     { }
361E_gm  =  -9999., 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., -9999., 49600., -9999. 
362
363# S_gm  ([J K-1 mol-1] ) :  Entropy term for gm         { }
364S_gm  =  -9999., 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., -9999., 1400., -9999. 
365
366# D_gm  ([J mol-1] ) :  Energy of deactivation for gm   { }
367D_gm  =  -9999., 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., -9999., 437400., -9999. 
368
369# E_Rd ([J mol-1]) :  Energy of activation for Rd       {}
370E_Rd =  -9999., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390.
371
372# VCMAX25 ([micromol/m^2/s]) :  Maximum rate of Rubisco activity-limited carboxylation at 25°C         {OK_STOMATE}
373VCMAX25 =  -9999., 45.0, 45.0, 35.0, 40.0, 50.0, 45.0, 35.0, 35.0, 50.0, 50.0, 60.0, 60.0
374
375# ARJV ([mu mol e- (mu mol CO2)-1]) :  a coefficient of the linear regression (a+bT) defining the Jmax25/Vcmax25 ratio          {OK_STOMATE}
376ARJV =  -9999., 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 1.715, 2.59, 1.715
377
378# BRJV ([(mu mol e- (mu mol CO2)-1) (°C)-1]) :  b coefficient of the linear regression (a+bT) defining the Jmax25/Vcmax25 ratio        {OK_STOMATE}
379BRJV =  -9999., -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, 0., -0.035, 0.
380
381# KmC25 ([ubar]) :  Michaelis–Menten constant of Rubisco for CO2 at 25°C     {}
382KmC25 =  -9999., 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 650., 404.9, 650.
383
384# KmO25 ([ubar]) :  Michaelis–Menten constant of Rubisco for O2 at 25°C      {}
385KmO25 =  -9999., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 450000., 278400., 450000.
386
387# Sco25 ([bar bar-1]) :  Relative CO2 /O2 specificity factor for Rubisco at 25°C     {}
388Sco25 =  -9999., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2590., 2800., 2590.
389
390# gm25  ([mol m-2 s-1 bar-1] ) :  Mesophyll diffusion conductance at 25°C        { }
391gm25  =  -9999., 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, -9999., 0.4, -9999. 
392
393# gamma_star25 ([ubar]) :  Ci-based CO2 compensation point in the absence of Rd at 25°C (ubar)         {}
394gamma_star25 =  -9999., 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75
395
396# a1 ([-]) :  Empirical factor involved in the calculation of fvpd      {}
397a1 =  -9999., 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.72, 0.85, 0.72
398
399# b1 ([-]) :  Empirical factor involved in the calculation of fvpd      {}
400b1 =  -9999., 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.20, 0.14, 0.20
401
402# g0 ([mol m−2 s−1 bar−1]) :  Residual stomatal conductance when irradiance approaches zero       {}
403g0 =  -9999., 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.01875, 0.00625, 0.01875 
404
405# h_protons ([mol mol-1]) :  Number of protons required to produce one ATP      {}
406h_protons =  -9999., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4. 
407
408# fpsir ([-]) :  Fraction of PSII e− transport rate partitioned to the C4 cycle       {}
409fpsir =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.4, -9999., 0.4 
410
411# fQ ([-]) :  Fraction of electrons at reduced plastoquinone that follow the Q-cycle    {}
412fQ =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 1., -9999., 1.
413
414# fpseudo ([-]) :  Fraction of electrons at PSI that follow pseudocyclic transport      {}
415fpseudo =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.1, -9999., 0.1
416
417# kp ([mol m−2 s−1 bar−1]) :  Initial carboxylation efficiency of the PEP carboxylase     {}
418kp =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.7, -9999., 0.7
419
420# alpha ([-]) :  Fraction of PSII activity in the bundle sheath         {}
421alpha =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.1, -9999., 0.1
422
423# gbs ([mol m−2 s−1 bar−1]) :  Bundle-sheath conductance  {}
424gbs =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.003, -9999., 0.003
425
426# theta ([−]) :  Convexity factor for response of J to irradiance     {}
427theta =  -9999., 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7
428
429# alpha_LL ([mol e− (mol photon)−1]) :  Conversion efficiency of absorbed light into J at strictly limiting light   {}
430alpha_LL =  -9999., 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372
431
432# STRESS_VCMAX ([-]) :  Stress on vcmax         {OK_SECHIBA or OK_STOMATE}
433STRESS_VCMAX =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
434
435# STRESS_GS ([-]) :  Stress on gs       {OK_SECHIBA or OK_STOMATE}
436STRESS_GS =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
437
438# STRESS_GM ([-]) :  Stress on gm       {OK_SECHIBA or OK_STOMATE}
439STRESS_GM =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
440
441# EXT_COEFF ([-]) :  extinction coefficient of the Monsi&Seaki relationship (1953)      {OK_SECHIBA or OK_STOMATE}
442EXT_COEFF =  .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5
443
444# EXT_COEFF_VEGETFRAC ([-]) :  extinction coefficient used for the calculation of the bare soil fraction        {OK_SECHIBA or OK_STOMATE}
445EXT_COEFF_VEGETFRAC =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
446
447# HYDROL_HUMCSTE ([m]) :  Root profile  {OK_SECHIBA}
448HYDROL_HUMCSTE =  humcste_ref2m or humcste_ref4m depending on zmaxh
449
450# PREF_SOIL_VEG ([-]        ) :  The soil tile number for each vegetation       {OK_SECHIBA or OK_STOMATE}
451PREF_SOIL_VEG =  1, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3
452
453# RSTRUCT_CONST ([s/m]) :  Structural resistance        {OK_SECHIBA}
454RSTRUCT_CONST =  0.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0,  2.5,  2.0,  2.0,  2.0
455
456# KZERO ([kg/m^2/s]) :  A vegetation dependent constant used in the calculation of the surface resistance.      {OK_SECHIBA}
457KZERO =  0.0, 12.E-5, 12.E-5, 12.e-5, 12.e-5, 25.e-5, 12.e-5,25.e-5, 25.e-5, 30.e-5, 30.e-5, 30.e-5, 30.e-5 
458
459# RVEG_PFT ([-]) :  Artificial parameter to increase or decrease canopy resistance.     {OK_SECHIBA}
460RVEG_PFT =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
461
462# WMAX_VEG ([kg/m^3]) :  Maximum field capacity for each of the vegetations (Temporary): max quantity of water  {OK_SECHIBA}
463WMAX_VEG =  150., 150., 150., 150., 150., 150., 150.,150., 150., 150., 150., 150., 150.
464
465# PERCENT_THROUGHFALL_PFT ([%]) :  Percent by PFT of precip that is not intercepted by the canopy. Default value depend on run mode.    {OK_SECHIBA}
466PERCENT_THROUGHFALL_PFT =  Case offline [0. 0. 0....] else [30. 30. 30.....]
467
468# SNOWA_AGED_VIS ([-]) :  Minimum snow albedo value for each vegetation type after aging (dirty old snow), visible albedo       {OK_SECHIBA}
469SNOWA_AGED_VIS =  0.74, 0.0, 0.0, 0.08, 0.24, 0.07, 0.18, 0.18, 0.33, 0.57, 0.57, 0.57, 0.57
470
471# SNOWA_AGED_NIR ([-]) :  Minimum snow albedo value for each vegetation type after aging (dirty old snow), near infrared albedo         {OK_SECHIBA}
472SNOWA_AGED_NIR =  0.50, 0.0, 0.0, 0.10, 0.37, 0.08, 0.16, 0.17, 0.27, 0.44, 0.44, 0.44, 0.44   
473
474# SNOWA_DEC_VIS ([-]) :  Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, visible albedo    {OK_SECHIBA}
475SNOWA_DEC_VIS =  0.21, 0.0, 0.0, 0.14, 0.08, 0.17, 0.05, 0.06, 0.09, 0.15, 0.15, 0.15, 0.15 
476
477# SNOWA_DEC_NIR ([-]) :  Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, near infrared albedo      {OK_SECHIBA}
478SNOWA_DEC_NIR =  0.13, 0.0, 0.0, 0.10, 0.10, 0.16, 0.04, 0.07, 0.08, 0.12, 0.12, 0.12, 0.12
479
480# ALB_LEAF_VIS ([-]) :  leaf albedo of vegetation type, visible albedo  {OK_SECHIBA}
481ALB_LEAF_VIS =  0.00, 0.04, 0.04, 0.04, 0.04, 0.03, 0.03, 0.03, 0.03, 0.06, 0.06, 0.06, 0.06
482
483# ALB_LEAF_NIR ([-]) :  leaf albedo of vegetation type, near infrared albedo    {OK_SECHIBA}
484ALB_LEAF_NIR =  0.00, 0.23, 0.18, 0.18, 0.20, 0.24, 0.15, 0.26, 0.20, 0.24, 0.27, 0.28, 0.26
485
486# ISO_ACTIVITY ([-]) :  Biogenic activity for each age class : isoprene         {CHEMISTRY_BVOC}
487ISO_ACTIVITY =  0.5, 1.5, 1.5, 0.5
488
489# METHANOL_ACTIVITY ([-]) :  Isoprene emission factor for each age class : methanol     {CHEMISTRY_BVOC}
490METHANOL_ACTIVITY =  1., 1., 0.5, 0.5
491
492# EM_FACTOR_ISOPRENE ([ugC/g/h] ) :  Isoprene emission factor   {CHEMISTRY_BVOC}
493EM_FACTOR_ISOPRENE =  0., 24., 24., 8., 16., 45., 8., 18., 0.5, 12., 18., 5., 5.
494
495# EM_FACTOR_MONOTERPENE ([ugC/g/h] ) :  Monoterpene emission factor     {CHEMISTRY_BVOC }
496EM_FACTOR_MONOTERPENE =  0., 2.0, 2.0, 1.8, 1.4, 1.6, 1.8, 1.4, 1.8, 0.8, 0.8,  0.22, 0.22
497
498# C_LDF_MONO  ([]) :  Monoterpenes fraction dependancy to light         {CHEMISTRY_BVOC}
499C_LDF_MONO  =  0.6
500
501# C_LDF_SESQ  ([]) :  Sesquiterpenes fraction dependancy to light       {CHEMISTRY_BVOC}
502C_LDF_SESQ  =  0.5
503
504# C_LDF_METH  ([]) :  Methanol fraction dependancy to light     {CHEMISTRY_BVOC}
505C_LDF_METH  =  0.8
506
507# C_LDF_ACET  ([]) :  Acetone fraction dependancy to light      {CHEMISTRY_BVOC}
508C_LDF_ACET  =  0.2
509
510# EM_FACTOR_APINENE  ([ugC/g/h] ) :  Alfa pinene  emission factor       {CHEMISTRY_BVOC }
511EM_FACTOR_APINENE  =  0., 1.35, 1.35, 0.85, 0.95, 0.75, 0.85, 0.60, 1.98, 0.30, 0.30, 0.09, 0.09
512
513# EM_FACTOR_BPINENE ([ugC/g/h] ) :  Beta pinene  emission factor        {CHEMISTRY_BVOC }
514EM_FACTOR_BPINENE =  0., 0.30, 0.30, 0.35, 0.25, 0.20, 0.35, 0.12, 0.45, 0.16, 0.12, 0.05, 0.05
515
516# EM_FACTOR_LIMONENE ([ugC/g/h] ) :  Limonene  emission factor  {CHEMISTRY_BVOC}
517EM_FACTOR_LIMONENE =  0., 0.25, 0.25, 0.20, 0.25, 0.14, 0.20, 0.135, 0.11, 0.19, 0.42, 0.03, 0.03
518
519# EM_FACTOR_MYRCENE ([ugC/g/h] ) :  Myrcene  emission factor    {CHEMISTRY_BVOC}
520EM_FACTOR_MYRCENE =  0., 0.20, 0.20, 0.12, 0.11, 0.065, 0.12, 0.036, 0.075, 0.08,  0.085, 0.015, 0.015
521
522# EM_FACTOR_SABINENE ([ugC/g/h] ) :  Sabinene  emission factor  {CHEMISTRY_BVOC}
523EM_FACTOR_SABINENE =  0., 0.20, 0.20, 0.12, 0.17, 0.70, 0.12, 0.50, 0.09, 0.085, 0.075, 0.02, 0.02
524
525# EM_FACTOR_CAMPHENE  ([ugC/g/h] ) :  Camphene  emission factor         {CHEMISTRY_BVOC}
526EM_FACTOR_CAMPHENE  =  0., 0.15, 0.15, 0.10, 0.10, 0.01, 0.10, 0.01, 0.07, 0.07, 0.08, 0.01, 0.01
527
528# EM_FACTOR_3CARENE  ([ugC/g/h] ) :  3-Carene  emission factor  {CHEMISTRY_BVOC}
529EM_FACTOR_3CARENE  =  0., 0.13, 0.13, 0.42, 0.02, 0.055, 0.42,0.025, 0.125, 0.085, 0.085, 0.065, 0.065
530
531# EM_FACTOR_TBOCIMENE ([ugC/g/h] ) :  T-beta-ocimene  emission factor   {CHEMISTRY_BVOC}
532EM_FACTOR_TBOCIMENE =  0., 0.25, 0.25, 0.13, 0.09, 0.26, 0.13, 0.20, 0.085, 0.18, 0.18, 0.01, 0.01
533
534# EM_FACTOR_OTHERMONOT ([ugC/g/h] ) :  Other monoterpenes  emission factor      {CHEMISTRY_BVOC}
535EM_FACTOR_OTHERMONOT =  0., 0.17, 0.17, 0.11, 0.11, 0.125, 0.11, 0.274, 0.01, 0.15, 0.155, 0.035, 0.035
536
537# EM_FACTOR_SESQUITERP  ([ugC/g/h] ) :  Sesquiterpenes  emission factor         {CHEMISTRY_BVOC}
538EM_FACTOR_SESQUITERP  =  0., 0.45, 0.45, 0.13, 0.3, 0.36, 0.15, 0.3, 0.25, 0.6, 0.6, 0.08, 0.08
539
540# C_BETA_MONO  ([]) :  Monoterpenes temperature dependency coefficient  {CHEMISTRY_BVOC}
541C_BETA_MONO  =  0.1
542
543# C_BETA_SESQ  ([]) :  Sesquiterpenes temperature dependency coefficient        {CHEMISTRY_BVOC}
544C_BETA_SESQ  =  0.17
545
546# C_BETA_METH  ([]) :  Methanol temperature dependency coefficient      {CHEMISTRY_BVOC}
547C_BETA_METH  =  0.08
548
549# C_BETA_ACET  ([]) :  Acetone temperature dependency coefficient       {CHEMISTRY_BVOC}
550C_BETA_ACET  =  0.1
551
552# C_BETA_OXYVOC  ([]) :  Other oxygenated BVOC temperature dependency coefficient       {CHEMISTRY_BVOC}
553C_BETA_OXYVOC  =  0.13
554
555# EM_FACTOR_ORVOC ([ugC/g/h]  ) :  ORVOC emissions factor       {CHEMISTRY_BVOC }
556EM_FACTOR_ORVOC =  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5
557
558# EM_FACTOR_OVOC ([ugC/g/h]        ) :  OVOC emissions factor   {CHEMISTRY_BVOC}
559EM_FACTOR_OVOC =  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5
560
561# EM_FACTOR_MBO ([ugC/g/h]  ) :  MBO emissions factor   {CHEMISTRY_BVOC }
562EM_FACTOR_MBO =  0., 2.e-5, 2.e-5, 1.4, 2.e-5, 2.e-5, 0.14, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5
563
564# EM_FACTOR_METHANOL ([ugC/g/h]  ) :  Methanol emissions factor         {CHEMISTRY_BVOC }
565EM_FACTOR_METHANOL =  0., 0.8, 0.8, 1.8, 0.9, 1.9, 1.8, 1.8, 1.8, 0.7, 0.9, 2., 2.
566
567# EM_FACTOR_ACETONE ([ugC/g/h]     ) :  Acetone emissions factor        {CHEMISTRY_BVOC }
568EM_FACTOR_ACETONE =  0., 0.25, 0.25, 0.3, 0.2, 0.33, 0.3, 0.25, 0.25, 0.2, 0.2, 0.08, 0.08
569
570# EM_FACTOR_ACETAL ([ugC/g/h]  ) :  Acetaldehyde emissions factor       {CHEMISTRY_BVOC}
571EM_FACTOR_ACETAL =  0., 0.2, 0.2, 0.2, 0.2, 0.25, 0.25, 0.16, 0.16, 0.12, 0.12, 0.035, 0.02
572
573# EM_FACTOR_FORMAL ([ugC/g/h]  ) :  Formaldehyde emissions factor       {CHEMISTRY_BVOC }
574EM_FACTOR_FORMAL =  0., 0.04, 0.04, 0.08, 0.04, 0.04, 0.04, 0.04, 0.04, 0.025, 0.025, 0.013, 0.013
575
576# EM_FACTOR_ACETIC ([ugC/g/h]  ) :  Acetic Acid emissions factor        {CHEMISTRY_BVOC }
577EM_FACTOR_ACETIC =  0., 0.025, 0.025,0.025,0.022,0.08,0.025,0.022,0.013,0.012,0.012,0.008,0.008
578
579# EM_FACTOR_FORMIC ([ugC/g/h]  ) :  Formic Acid emissions factor        {CHEMISTRY_BVOC}
580EM_FACTOR_FORMIC =  0., 0.015, 0.015, 0.02, 0.02, 0.025, 0.025, 0.015, 0.015,0.010,0.010,0.008,0.008
581
582# EM_FACTOR_NO_WET ([ngN/m^2/s]) :  NOx emissions factor wet soil emissions and exponential dependancy factor   {CHEMISTRY_BVOC}
583EM_FACTOR_NO_WET =  0., 2.6, 0.06, 0.03, 0.03, 0.03, 0.03, 0.03, 0.03, 0.36, 0.36, 0.36, 0.36
584
585# EM_FACTOR_NO_DRY ([ngN/m^2/s] ) :  NOx emissions factor dry soil emissions and exponential dependancy factor          {CHEMISTRY_BVOC}
586EM_FACTOR_NO_DRY =  0., 8.60, 0.40, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 2.65, 2.65, 2.65, 2.65
587
588# LARCH ([-]  ) :  Larcher 1991 SAI/LAI ratio   {CHEMISTRY_BVOC }
589LARCH =  0., 0.015, 0.015, 0.003, 0.005, 0.005, 0.003, 0.005, 0.003, 0.005, 0.005, 0.008, 0.008
590
591# NUE_OPT ([(mumol[CO2] s-1) (gN[leaf])-1]) :  Nitrogen use efficiency of Vcmax         {OK_STOMATE}
592NUE_OPT =  -9999.,  14.,  30., 20., 33.,  38., 15., 38., 22.,  45.,  45.,  60.,  60.   
593
594# CN_LEAF_MIN ([gC/gN] ) :  minimum CN ratio of leaves          {OK_STOMATE}
595CN_LEAF_MIN =  -9999., 16., 16., 28., 16., 16., 28., 16., 16., 16., 16., 16., 16. 
596
597# CN_LEAF_MAX ([gC/gN] ) :  maximum CN ratio of leaves          {OK_STOMATE}
598CN_LEAF_MAX =  -9999., 45., 45., 75., 45., 45., 75., 45., 45., 45., 45., 45., 45. 
599
600# CN_LEAF_INIT () :     {}
601CN_LEAF_INIT =  -9999., 25.,  25.,  41.7,  25.,  25.,  43., 25.,  25.,  25.,  25.,  25.,  25.
602
603# EXT_COEFF_N ([(m2[ground]) (m-2[leaf])]) :  Extinction coefficient of the leaf N content profile within the canopy    {OK_STOMATE}
604EXT_COEFF_N =   0.15, 0.15, 0.15,0.15,0.15, 0.15,0.15,0.15,0.15, 0.15, 0.15, 0.15, 0.15
605
606# SLA ([m^2/gC]) :  specif leaf area    {OK_STOMATE}
607SLA =  1.5E-2, 1.53E-2, 2.6E-2, 9.26E-3, 2E-2, 2.6E-2, 9.26E-3, 2.6E-2, 1.9E-2, 2.6E-2, 2.6E-2, 2.6E-2, 2.6E-2
608
609# SLAINIT ([m^2/gC]) :  initial specif leaf area at (ie at bottom of canopy eq. lai     {OK_STOMATE}
610SLAINIT =  2.6E-2, 2.6E-2, 4.4E-2, 1.4E-2, 3.0E-2, 3.9E-2, 1.3E-2, 3.7E-2, 2.4E-2, 3.1E-2, 3.1E-2, 3.9E-2, 3.9E-2
611
612# AVAILABILITY_FACT  ([-]   ) :  Calculate dynamic mortality in lpj_gap, pft dependent parameter        {OK_STOMATE }
613AVAILABILITY_FACT  =  -9999., 0.14, 0.14, 0.10, 0.10, 0.10, 0.05, 0.05, 0.05, -9999., -9999., -9999., -9999. 
614
615# R0  ([-]    ) :  Standard root allocation     {OK_STOMATE }
616R0  =  -9999., .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30
617
618# S0  ([-]    ) :  Standard sapwood allocation          {OK_STOMATE }
619S0  =  -9999., .25, .25, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30
620
621# FRAC_GROWTHRESP ([-]) :  fraction of GPP which is lost as growth respiration  {OK_STOMATE}
622FRAC_GROWTHRESP =  -9999., 0.35, 0.35, 0.28, 0.28, 0.28, 0.35, 0.35, 0.35, 0.28, 0.28, 0.28, 0.28
623
624# COEFF_MAINT_INIT ([gC/gN/day]) :  maintenance respiration coefficient at 10 deg C     {OK_STOMATE}
625COEFF_MAINT_INIT =  -9999., 3.06E-2, 3.06E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2
626
627# TREF_MAINT_RESP ([degC]) :  maintenance respiration Temperature coefficient   {OK_STOMATE}
628TREF_MAINT_RESP =    &  -9999., 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02  /)   
629
630# TMIN_MAINT_RESP ([degC]) :  maintenance respiration Temperature coefficient   {OK_STOMATE}
631TMIN_MAINT_RESP =    &  -9999., 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02  /)   
632
633# E0_MAINT_RESP ([-]) :  maintenance respiration Temperature coefficient        {OK_STOMATE}
634E0_MAINT_RESP =    &  -9999., 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56  /)   
635
636# FLAM ([-]) :  flamability: critical fraction of water holding capacity        {OK_STOMATE}
637FLAM =  -9999., .15, .25, .25, .25, .25, .25, .25, .25, .25, .25, .35, .35
638
639# RESIST ([-]) :  fire resistance       {OK_STOMATE}
640RESIST =  -9999., .95, .90, .12, .50, .12, .12, .12, .12, .0, .0, .0, .0 
641
642# COEFF_LCCHANGE_1 ([-]) :  Coeff of biomass export for the year        {OK_STOMATE}
643COEFF_LCCHANGE_1 =  -9999., 0.897, 0.897, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597 
644
645# COEFF_LCCHANGE_10 ([-]) :  Coeff of biomass export for the decade     {OK_STOMATE}
646COEFF_LCCHANGE_10 =  -9999., 0.103, 0.103, 0.299, 0.299, 0.299, 0.299, 0.299, 0.299, 0.299, 0.403, 0.299, 0.403
647
648# COEFF_LCCHANGE_100 ([-]) :  Coeff of biomass export for the century   {OK_STOMATE}
649COEFF_LCCHANGE_100 =  -9999., 0., 0., 0.104, 0.104, 0.104, 0.104, 0.104, 0.104, 0.104, 0., 0.104, 0.
650
651# LAI_MAX_TO_HAPPY ([-]) :  threshold of LAI below which plant uses carbohydrate reserves       {OK_STOMATE}
652LAI_MAX_TO_HAPPY =  -9999., .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5 
653
654# LAI_MAX ([m^2/m^2]) :  maximum LAI, PFT-specific      {OK_STOMATE}
655LAI_MAX =  -9999., 7.0, 5.0, 5.0, 4.0, 5.0, 3.5, 4.0, 3.0, 2.5, 2.0, 5.0, 5.0
656
657# PHENO_TYPE ([-]) :  type of phenology, 0      {OK_STOMATE}
658PHENO_TYPE =  0, 1, 3, 1, 1, 2, 1, 2, 2, 4, 4, 2, 3
659
660# PHENO_GDD_CRIT_C ([-]) :  critical gdd, tabulated (C), constant c of aT^2+bT+c        {OK_STOMATE}
661PHENO_GDD_CRIT_C =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 270., 400., 125., 400.
662
663# PHENO_GDD_CRIT_B ([-]) :  critical gdd, tabulated (C), constant b of aT^2+bT+c        {OK_STOMATE}
664PHENO_GDD_CRIT_B =  -9999., -9999., -9999., -9999., -9999., -9999., -9999.,-9999., -9999., 6.25, 0., 0., 0.
665
666# PHENO_GDD_CRIT_A ([-]) :  critical gdd, tabulated (C), constant a of aT^2+bT+c        {OK_STOMATE}
667PHENO_GDD_CRIT_A =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.03125,  0., 0., 0.
668
669# PHENO_MOIGDD_T_CRIT ([C]) :  Average temperature threashold for C4 grass used in pheno_moigdd         {OK_STOMATE}
670PHENO_MOIGDD_T_CRIT =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 22.0, -9999., -9999.
671
672# NGD_CRIT ([days]) :  critical ngd, tabulated. Threshold -5 degrees    {OK_STOMATE}
673NGD_CRIT =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0., -9999., -9999., -9999., -9999., -9999.
674
675# NCDGDD_TEMP ([C] ) :  critical temperature for the ncd vs. gdd function in phenology  {OK_STOMATE}
676NCDGDD_TEMP =  -9999., -9999., -9999., -9999., -9999., 5., -9999., 0., -9999., -9999., -9999., -9999., -9999.
677
678# HUM_FRAC ([%]) :  critical humidity (relative to min/max) for phenology       {OK_STOMATE}
679HUM_FRAC =  -9999., -9999., .5, -9999., -9999., -9999., -9999., -9999.,  -9999., .5, .5, .5,.5     
680
681# HUM_MIN_TIME ([days]) :  minimum time elapsed since moisture minimum  {OK_STOMATE}
682HUM_MIN_TIME =  -9999., -9999., 50., -9999., -9999., -9999., -9999., -9999., -9999., 35., 35., 75., 75.
683
684# TAU_SAP ([days]) :  sapwood -> heartwood conversion time      {OK_STOMATE}
685TAU_SAP =  -9999., 730., 730., 730., 730., 730., 730., 730., 730., -9999., -9999., -9999., -9999.
686
687# TAU_LEAFINIT ([days]) :  time to attain the initial foliage using the carbohydrate reserve    {OK_STOMATE}
688TAU_LEAFINIT =  -9999., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10.
689
690# TAU_FRUIT ([days]) :  fruit lifetime  {OK_STOMATE}
691TAU_FRUIT =  -9999., 90., 90., 90., 90., 90., 90., 90., 90., -9999., -9999., -9999., -9999.
692
693# TAU_ROOT ([days]) :  root longivety   {OK_STOMATE}
694TAU_ROOT =  -9999., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256.
695
696# ECUREUIL ([-]) :  fraction of primary leaf and root allocation put into reserve       {OK_STOMATE}
697ECUREUIL =  -9999., .0, 1., .0, .0, 1., .0, 1., 1., 1., 1., 1., 1.
698
699# ALLOC_MIN ([-]) :  minimum allocation above/below     {OK_STOMATE}
700ALLOC_MIN =  -9999., 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, -9999., -9999., -9999., -9999. 
701
702# ALLOC_MAX ([-]) :  maximum allocation above/below     {OK_STOMATE}
703ALLOC_MAX =  -9999., 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, -9999., -9999., -9999., -9999.
704
705# DEMI_ALLOC  ([-]) :  mean allocation above/below      {OK_STOMATE}
706DEMI_ALLOC  =  -9999., 5., 5., 5., 5., 5., 5., 5., 5., -9999., -9999., -9999., -9999.
707
708# LEAFLIFE_TAB ([years]) :  leaf longevity      {OK_STOMATE}
709LEAFLIFE_TAB =  -9999., .5, 2., .33, 1., 2., .33, 2., 2., 2., 2., 2., 2. 
710
711# K_LATOSA_MAX ([-] ) :  Maximum leaf-to-sapwood area ratio     {OK_STOMATE}
712K_LATOSA_MAX =  (-9999., 5., 5., 5., 3., 5., 5., 5., 5., -9999., -9999., -9999., -9999.)*1.e3
713
714# K_LATOSA_MIN ([-] ) :  Minimum leaf-to-sapwood area ratio     {OK_STOMATE}
715K_LATOSA_MIN =  (-9999., 5., 5., 5., 3., 5., 5., 5., 5., -9999., -9999., -9999., -9999.)*1.e3
716
717# LC_leaf  ([-]   ) :  Lignine/C ratio of leaf pool     {OK_STOMATE }
718LC_leaf  =  -9999., 0.18, 0.18, 0.24, 0.18, 0.18, 0.24, 0.18, 0.24, 0.09, 0.09, 0.09, 0.09
719
720# LC_sapabove  ([-]   ) :  Lignine/C ratio of sapabove pool     {OK_STOMATE }
721LC_sapabove  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
722
723# LC_sapbelow  ([-]   ) :  Lignine/C ratio of sapbelow pool     {OK_STOMATE }
724LC_sapbelow  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
725
726# LC_heartabove  ([-]   ) :  Lignine/C ratio of heartabove pool         {OK_STOMATE }
727LC_heartabove  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
728
729# LC_heartbelow  ([-]   ) :  Lignine/C ratio of heartbelow pool         {OK_STOMATE }
730LC_heartbelow  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
731
732# LC_fruit ([-]   ) :  Lignine/C ratio of fruit pool    {OK_STOMATE }
733LC_fruit =  -9999., 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09
734
735# LC_root ([-]   ) :  Lignine/C ratio of fruit pool     {OK_STOMATE }
736LC_root =  -9999., 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22
737
738# LC_carbres ([-]   ) :  Lignine/C ratio of carbres pool        {OK_STOMATE }
739LC_carbres =  -9999., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.
740
741# LC_labile ([-]   ) :  Lignine/C ratio of labile pool  {OK_STOMATE }
742LC_labile =  -9999., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.
743
744# DECOMP_FACTOR  () :  Multpliactive factor modifying the standard decomposition factor for each SOM pool       {}
745DECOMP_FACTOR  =  -9999., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.2, 1.4 
746
747# PIPE_DENSITY  () :    {}
748PIPE_DENSITY  =  -9999., 3.e5, 3.e5, 2.e5, 3.e5, 3.e5, 2.e5, 3.e5, 2.e5, 2.e5, 2.e5, 2.e5, 2.e5
749
750# TREE_FF ([-]  ) :  Tree form factor reducing the volume of a cylinder         {OK_STOMATE }
751TREE_FF =  -9999., 0.6, 0.6, 0.6, 0.6, 0.6, 0.8, 0.8, 0.8, 0., 0., 0., 0.
752
753# PIPE_TUNE1 ([-]    ) :  crown area    {OK_STOMATE }
754PIPE_TUNE1 =  -9999., 100., 100., 100., 100., 100., 100., 100., 100., 0., 0., 0., 0. 
755
756# PIPE_TUNE2  ([-]      ) :  height     {OK_STOMATE }
757PIPE_TUNE2  =  -9999., 40., 40., 40., 40., 40., 40., 40., 40., 0., 0., 0., 0.   
758
759# PIPE_TUNE3 ([-]    ) :  height        {OK_STOMATE }
760PIPE_TUNE3 =  -9999., 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0., 0., 0., 0.   
761
762# PIPE_TUNE4 ([-]  ) :  needed for stem diameter        {OK_STOMATE }
763PIPE_TUNE4 =  -9999., 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0., 0., 0., 0.
764
765# PIPE_K1  ([-]   ) :           {OK_STOMATE }
766PIPE_K1  =  -9999., 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 0., 0., 0., 0. 
767
768# PIPE_TUNE_EXP_COEFF  ([-]   ) :  pipe tune exponential coeff          {OK_STOMATE }
769PIPE_TUNE_EXP_COEFF  =  -9999., 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 0., 0., 0., 0.   
770
771# MASS_RATIO_HEART_SAP  ([-]   ) :  mass ratio (heartwood+sapwood)/heartwood    {OK_STOMATE }
772MASS_RATIO_HEART_SAP  =  -9999., 3., 3., 3., 3., 3., 3., 3., 3., 0., 0., 0., 0.   
773
774# CANOPY_COVER ([-] ) :  Test values for canopy cover   {OK_STOMATE, OK_FUNCTIONAL_ALLOCATION}
775CANOPY_COVER =  -9999., 0.9, 0.9, 0.7, 0.7, 0.7, 0.6, 0.5, 0.5, 0.9, 0.9, 0.9, 0.9
776
777# NMAXTREES ([trees ha-1]) :  number of seedlings planted at the start of a rotation    {FOREST_MANAGEMENT }
778NMAXTREES =  (-9999., 10., 10., 10., 10., 10., 2., 2., 2., 10., 10., 10., 10.)*1.e3
779
780# HEIGHT_INIT_MIN ([m]) :       {FUNCTIONAL ALLOCATION }
781HEIGHT_INIT_MIN =  -9999., 2, 2, 2, 2, 2, 3, 3, 3, 3, 0.1, 0.1, 0.1, 0.1
782
783# HEIGHT_INIT_MAX ([m]) :       {FUNCTIONAL ALLOCATION }
784HEIGHT_INIT_MAX =  -9999., 3, 3, 3, 3, 3, 4, 4, 4, 4, 0.2, 0.2, 0.2, 0.2
785
786# LAI_TO_HEIGHT ([m m2 m-2] ) :  Convertion factor from lai to vegetation height for grasses and crops  {OK_STOMATE, OK_FUNCTIONAL_ALLOCATION}
787LAI_TO_HEIGHT =  -9999., 
788
789# DELEUZE_A () :  intercept of the intra-tree competition within a stand        {OK_STOMATE, functional allocation }
790DELEUZE_A =  -9999., 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, -9999., -9999., -9999., -9999.
791
792# DELEUZE_B () :  slope of the intra-tree competition within a stand    {OK_STOMATE, functional allocation  }
793DELEUZE_B =  -9999., 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, -9999., -9999., -9999., -9999.
794
795# DELEUZE_P_ALL () :  Percentile of the circumferences that receives photosynthates     {OK_STOMATE, functional allocation  }
796DELEUZE_P_ALL =  -9999., 0.5, 0.5, 0.99, 0.99, 0.99, 0.99, 0.99, 0.99, 0.99, -9999., -9999., -9999., -9999.
797
798# M_DV () :     {FOREST_MANAGEMENT }
799M_DV =  -9999., 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, -9999., -9999., -9999., -9999.
800
801# FRUIT_ALLOC ([-] ) :  Guestimates - should be confirmed       {OK_STOMATE}
802FRUIT_ALLOC =  (-9999., 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0., 0., 0., 0.)
803
804# LABILE_RESERVE  () :  Depends on the allocation scheme        {}
805LABILE_RESERVE  =  -9999., 30., 60., 60., 30., 60., 30., 30., 30., 30., 30., 30. 
806
807# EVERGREEN_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of evergreen trees   {OK_STOMATE, functional allocation }
808EVERGREEN_RESERVE =  -9999., 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05 
809
810# DECIDUOUS_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of   {OK_STOMATE, functional allocation }
811DECIDUOUS_RESERVE =  -9999., 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12
812
813# SENESCENSE_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of          {OK_STOMATE, functional allocation }
814SENESCENSE_RESERVE =  -9999., 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15 
815
816# FCN_WOOD ([-] ) :  CN of wood for allocation, relative to leaf CN     {OK_STOMATE}
817FCN_WOOD =  -9999., .087, .087, .087, .087, .087, .087, .087, .087, .087, .087, .087
818
819# FCN_ROOT ([-] ) :  CN roots for allocation, relative to leaf CN       {OK_STOMATE}
820FCN_ROOT =  -9999., 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86
821
822# BRANCH_RATIO () :     {FOREST_MANAGEMENT }
823BRANCH_RATIO =  0.0, 0.38, 0.38, 0.25, 0.38, 0.38, 0.25, 0.38, 0.25, 0.0, 0.0, 0.0, 0.0   
824
825# K_ROOT ([m^{3} kg^{-1} s^{-1} MPa^{-1}] ) :  Fine root specific conductivity  {OK_STOMATE}
826K_ROOT =  (-9999., 4., 4., 4., 4., 4., 4., 4., 4., 50., 50., 50., 50.)*1.e-7 
827
828# K_SAP ([m^{2} s^{-1} MPa^{-1}] ) :  Sapwood specific conductivity     {OK_STOMATE}
829K_SAP =  (-9999., 50., 10., 8., 5., 30., 8., 20., 8., -9999., -9999., -9999., -9999.)*1.e-4
830
831# LEAFFALL ([days]) :  length of death of leaves, tabulated     {OK_STOMATE}
832LEAFFALL =  -9999., -9999., 10., -9999., -9999., 10., -9999., 10., 10., 10., 10., 10., 10. 
833
834# LEAFAGECRIT ([days]) :  critical leaf age, tabulated  {OK_STOMATE}
835LEAFAGECRIT =  -9999., 730., 180., 910., 730., 180., 910., 180., 180., 120., 120., 90., 90.   
836
837# SENESCENCE_TYPE ([-]) :  type of senescence, tabulated        {OK_STOMATE}
838SENESCENCE_TYPE =  none, none, dry, none, none, cold, none, cold, cold, mixed, mixed, mixed, mixed 
839
840# SENESCENCE_HUM ([-] ) :  critical relative moisture availability for senescence       {OK_STOMATE}
841SENESCENCE_HUM =  -9999., -9999., .3, -9999., -9999., -9999., -9999., -9999., -9999., .2, .2, .3, .2 
842
843# NOSENESCENCE_HUM ([-]) :  relative moisture availability above which there is no humidity-related senescence  {OK_STOMATE}
844NOSENESCENCE_HUM =  -9999., -9999., .8, -9999., -9999., -9999., -9999., -9999., -9999., .3, .3, .3, .3 
845
846# MAX_TURNOVER_TIME ([days]) :  maximum turnover time for grasse        {OK_STOMATE}
847MAX_TURNOVER_TIME =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999.,  80.,  80., 80., 80. 
848
849# MIN_TURNOVER_TIME ([days]) :  minimum turnover time for grasse        {OK_STOMATE}
850MIN_TURNOVER_TIME =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 10., 10., 10., 10. 
851
852# RECYCLE_LEAF ([-]) :  Fraction of N leaf that is recycled when leaves are senescent   {OK_STOMATE}
853RECYCLE_LEAF =  -9999., 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5 
854
855# RECYCLE_ROOT ([-]) :  Fraction of N root that is recycled when roots are senescent    {OK_STOMATE}
856RECYCLE_ROOT =  -9999., 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2 
857
858# MIN_LEAF_AGE_FOR_SENESCENCE ([days] ) :  minimum leaf age to allow senescence g       {OK_STOMATE}
859MIN_LEAF_AGE_FOR_SENESCENCE =  -9999., -9999., 90., -9999., -9999., 90., -9999., 60., 60., 30., 30., 30., 30.
860
861# SENESCENCE_TEMP_C ([-]) :  critical temperature for senescence (C), constant c of aT^2+bT+c, tabulated        {OK_STOMATE}
862SENESCENCE_TEMP_C =  -9999., -9999., -9999., -9999., -9999., 12., -9999., 7., 2., -1.375, 5., 5., 10.
863
864# SENESCENCE_TEMP_B ([-]) :  critical temperature for senescence (C), constant b of aT^2+bT+c ,tabulated        {OK_STOMATE }
865SENESCENCE_TEMP_B =  -9999., -9999., -9999., -9999., -9999., 0., -9999., 0., 0., .1, 0., 0., 0.
866
867# SENESCENCE_TEMP_A ([-] ) :  critical temperature for senescence (C), constant a of aT^2+bT+c , tabulated      {OK_STOMATE}
868SENESCENCE_TEMP_A =  -9999., -9999., -9999., -9999., -9999., 0., -9999., 0., 0.,.00375, 0., 0., 0. 
869
870# GDD_SENESCENCE ([days] ) :  minimum gdd to allow senescence of crops          {OK_STOMATE}
871GDD_SENESCENCE =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 950., 4000.
872
873# ALWAYS_INIT ([BOOLEAN]) :  Take carbon from atmosphere if carbohydrate reserve too small      {OK_STOMATE}
874ALWAYS_INIT =  y, y, y, y, y, y, y, y, y, y, n, y, y
875
876# MAX_SOIL_N_BNF ([gN/m**2] ) :  Value of total N (NH4+NO3) above which we stop adding N via BNF (gN/m**2)      {OK_STOMATE}
877MAX_SOIL_N_BNF =  0.0, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 2., 2., 2., 2.
878
879# MANURE_PFTWEIGHT ([gC/gN] ) :  Weight of the distribution of manure over the PFT surface      {OK_STOMATE}
880MANURE_PFTWEIGHT =  0., 0., 0., 0., 0., 0., 0., 0., 0., 1., 1., 1., 1. 
881
882# RESIDENCE_TIME ([years]) :  residence time of trees   {OK_DGVM and NOT(LPJ_GAP_CONST_MORT)}
883RESIDENCE_TIME =  -9999., 30.0, 30.0, 40.0, 40.0, 40.0, 80.0, 80.0, 80.0, 0.0, 0.0, 0.0, 0.0 
884
885# TMIN_CRIT ([C]) :  critical tmin, tabulated   {OK_STOMATE}
886TMIN_CRIT =  -9999.,  0.0, 0.0, -30.0, -14.0, -30.0, -45.0, -45.0, -9999., -9999., -9999., -9999., -9999.
887
888# TCM_CRIT ([C]) :  critical tcm, tabulated     {OK_STOMATE}
889TCM_CRIT =  -9999., -9999., -9999., 5.0, 15.5, 15.5, -8.0, -8.0, -8.0, -9999., -9999., -9999., -9999.
890
891# HERBIVORES ([FLAG]) :  herbivores allowed?    {OK_STOMATE }
892HERBIVORES =  n
893
894# TREAT_EXPANSION ([FLAG]) :  treat expansion of PFTs across a grid cell?       {OK_STOMATE }
895TREAT_EXPANSION =  n
896
897# SLA_DYN ([FLAG]) :  Account for a dynamic SLA         {OK_STOMATE}
898SLA_DYN =  n
899
900# LPJ_GAP_CONST_MORT ([FLAG]) :  Constant mortality     {OK_STOMATE AND NOT OK_DGVM}
901LPJ_GAP_CONST_MORT =  y/n depending on OK_DGVM
902
903# HARVEST_AGRI ([FLAG]) :  Harvest model for agricultural PFTs.         {OK_STOMATE }
904HARVEST_AGRI =  y
905
906# FIRE_DISABLE ([FLAG]) :  no fire allowed      {OK_STOMATE }
907FIRE_DISABLE =  y
908
909# SPINUP_ANALYTIC (BOOLEAN    ) :  Activation of the analytic resolution of the spinup.         {OK_STOMATE}
910SPINUP_ANALYTIC =  n
911
912# AGRICULTURE ([FLAG]) :  agriculture allowed?  {OK_SECHIBA or OK_STOMATE}
913AGRICULTURE =  y
914
915# IMPOSE_VEG ([FLAG]) :  Should the vegetation be prescribed ?  {OK_SECHIBA or OK_STOMATE}
916IMPOSE_VEG =  n
917
918# IMPOSE_SOILT ([FLAG]) :  Should the soil type be prescribed ?         {IMPOSE_VEG}
919IMPOSE_SOILT =  n
920
921# IMPOSE_NINPUT_DEP ([FLAG]) :  Should the N inputs from atmospheric deposition be prescribed ?         {NOT IMPOSE_CN}
922IMPOSE_NINPUT_DEP =  n
923
924# IMPOSE_NINPUT_FERT ([FLAG]) :  Should the N inputs from fertilizer be prescribed ?    {-}
925IMPOSE_NINPUT_FERT =  n
926
927# IMPOSE_NINPUT_MANURE ([FLAG]) :  Should the N inputs from manure be prescribed ?      {-}
928IMPOSE_NINPUT_MANURE =  n
929
930# IMPOSE_NINPUT_BNF ([FLAG]) :  Should the N inputs from biological nitrogen fixation (BNF) be prescribed ?     {-}
931IMPOSE_NINPUT_BNF =  n
932
933# LAI_MAP ([FLAG]) :  Read the LAI map  {OK_SECHIBA or OK_STOMATE}
934LAI_MAP =  n
935
936# VEGET_UPDATE ([years]) :  Update vegetation frequency: 0Y or 1Y       {}
937VEGET_UPDATE =  0Y
938
939# VEGETMAP_RESET ([FLAG] ) :  Flag to change vegetation map without activating LAND USE change for carbon fluxes. At the same time carbon related variables are reset to zero.  {}
940VEGETMAP_RESET =  n
941
942# NINPUT_REINIT ([FLAG] ) :  booleen to indicate that a new N INPUT file will be used.  {-}
943NINPUT_REINIT =  y
944
945# NINPUT_YEAR ([FLAG] ) :  Year of the N input map to be read   {-}
946NINPUT_YEAR =  1
947
948# NINPUT_SUFFIX_YEAR ([FLAG] ) :  Do the Ninput dataset have a 'year' suffix    {-}
949NINPUT_SUFFIX_YEAR =  false
950
951# MAXMASS_SNOW ([kg/m^2]  ) :  The maximum mass of a snow       {OK_SECHIBA}
952MAXMASS_SNOW =  3000.
953
954# SNOWCRI ([kg/m^2]  ) :  Sets the amount above which only sublimation occures          {OK_SECHIBA}
955SNOWCRI =  1.5
956
957# MIN_WIND ([m/s]) :  Minimum wind speed        {OK_SECHIBA}
958MIN_WIND =  0.1
959
960# MAX_SNOW_AGE ([days?]) :  Maximum period of snow aging        {OK_SECHIBA}
961MAX_SNOW_AGE =  50.
962
963# SNOW_TRANS ([m]   ) :  Transformation time constant for snow  {OK_SECHIBA}
964SNOW_TRANS =  0.2
965
966# OK_NUDGE_MC ([FLAG]) :  Activate nudging of soil moisture     {}
967OK_NUDGE_MC =  n
968
969# NUDGE_TAU_MC ([-]) :  Relaxation time for nudging of soil moisture expressed in fraction of the day   {OK_NUDGE_MC}
970NUDGE_TAU_MC =  1
971
972# OK_NUDGE_SNOW ([FLAG]) :  Activate nudging of snow variables  {}
973OK_NUDGE_SNOW =  n
974
975# NUDGE_TAU_SNOW ([-]) :  Relaxation time for nudging of snow variables         {OK_NUDGE_SNOW}
976NUDGE_TAU_SNOW =  1
977
978# NUDGE_INTERPOL_WITH_XIOS ([FLAG]) :  Activate reading and interpolation with XIOS for nudging fields  {OK_NUDGE_MC or OK_NUDGE_SNOW}
979NUDGE_INTERPOL_WITH_XIOS =  n
980
981# HEIGHT_DISPLACEMENT ([m]  ) :  Magic number which relates the height to the displacement height.      {OK_SECHIBA }
982HEIGHT_DISPLACEMENT =  0.75
983
984# Z0_BARE ([m]   ) :  bare soil roughness length        {OK_SECHIBA }
985Z0_BARE =  0.01 
986
987# Z0_ICE ([m]   ) :  ice roughness length       {OK_SECHIBA }
988Z0_ICE =  0.001
989
990# TCST_SNOWA ([days]) :  Time constant of the albedo decay of snow      {OK_SECHIBA }
991TCST_SNOWA =  10.0 
992
993# SNOWCRI_ALB ([cm]  ) :  Critical value for computation of snow albedo         {OK_SECHIBA}
994SNOWCRI_ALB =  10. 
995
996# VIS_DRY ([-]  ) :  The correspondance table for the soil color numbers and their albedo       {OK_SECHIBA }
997VIS_DRY =  0.24, 0.22, 0.20, 0.18, 0.16, 0.14, 0.12, 0.10, 0.27
998
999# NIR_DRY ([-]   ) :  The correspondance table for the soil color numbers and their albedo      {OK_SECHIBA }
1000NIR_DRY =  0.48, 0.44, 0.40, 0.36, 0.32, 0.28, 0.24, 0.20, 0.55
1001
1002# VIS_WET  ([-]   ) :  The correspondance table for the soil color numbers and their albedo     {OK_SECHIBA  }
1003VIS_WET  =  0.12, 0.11, 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.15
1004
1005# NIR_WET ([-]    ) :  The correspondance table for the soil color numbers and their albedo     {OK_SECHIBA }
1006NIR_WET =  0.24, 0.22, 0.20, 0.18, 0.16, 0.14, 0.12, 0.10, 0.31
1007
1008# ALBSOIL_VIS ([-]  ) :         {OK_SECHIBA }
1009ALBSOIL_VIS =  0.18, 0.16, 0.16, 0.15, 0.12, 0.105, 0.09, 0.075, 0.25
1010
1011# ALBSOIL_NIR  ([-]  ) :        {OK_SECHIBA }
1012ALBSOIL_NIR  =  0.36, 0.34, 0.34, 0.33, 0.30, 0.25, 0.20, 0.15, 0.45
1013
1014# ALB_DEADLEAF  ([-]     ) :  albedo of dead leaves, VIS+NIR    {OK_SECHIBA }
1015ALB_DEADLEAF  =  0.12, 0.35
1016
1017# ALB_ICE ([-]  ) :  albedo of ice, VIS+NIR     {OK_SECHIBA}
1018ALB_ICE =  0.60, 0.20
1019
1020# CONDVEG_SNOWA ([-]) :  The snow albedo used by SECHIBA        {OK_SECHIBA}
1021CONDVEG_SNOWA =  1.E+20
1022
1023# ALB_BARE_MODEL ([FLAG]) :  Switch bare soil albedo dependent (if TRUE) on soil wetness        {OK_SECHIBA}
1024ALB_BARE_MODEL =  n
1025
1026# ALB_BG_MODIS ([FLAG]) :  Read bare soil albedo from file with background MODIS data   {OK_SECHIBA}
1027ALB_BG_MODIS =  y
1028
1029# IMPOSE_AZE ([FLAG]) :  Should the surface parameters be prescribed    {OK_SECHIBA}
1030IMPOSE_AZE =  n
1031
1032# CONDVEG_Z0 ([m]) :  Surface roughness         {IMPOSE_AZE}
1033CONDVEG_Z0 =  0.15
1034
1035# ROUGHHEIGHT ([m] ) :  Height to be added to the height of the first level     {IMPOSE_AZE}
1036ROUGHHEIGHT =  0.0
1037
1038# CONDVEG_ALBVIS ([-]) :  SW visible albedo for the surface     {IMPOSE_AZE}
1039CONDVEG_ALBVIS =  0.25
1040
1041# CONDVEG_ALBNIR ([-]  ) :  SW near infrared albedo for the surface     {IMPOSE_AZE}
1042CONDVEG_ALBNIR =  0.25
1043
1044# CONDVEG_EMIS ([-] ) :  Emissivity of the surface for LW radiation     {IMPOSE_AZE}
1045CONDVEG_EMIS =  1.0
1046
1047# ROUGH_DYN ([FLAG]) :  Account for a dynamic roughness height  {OK_SECHIBA}
1048ROUGH_DYN =  y
1049
1050# C1 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1051C1 =  0.32
1052
1053# C2 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1054C2 =  0.264
1055
1056# C3 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1057C3 =  15.1
1058
1059# Cdrag_foliage ([-] ) :  Drag coefficient of the foliage       {ROUGH_DYN}
1060Cdrag_foliage =  0.2
1061
1062# Ct ([-] ) :  Heat transfer coefficient of the leaf    {ROUGH_DYN}
1063Ct =  0.01
1064
1065# Prandtl ([-] ) :  Prandtl number used in the calculation of Ct*       {ROUGH_DYN}
1066Prandtl =  0.71
1067
1068# xansmax  ([-] ) :  maximum snow albedo        {OK_SECHIBA}
1069xansmax  =  0.85
1070
1071# xansmin  ([-] ) :  minimum snow albedo        {OK_SECHIBA}
1072xansmin  =  0.50
1073
1074# xans_todry  ([S-1] ) :  albedo decay rate for the dry snow    {OK_SECHIBA}
1075xans_todry  =  0.008
1076
1077# xans_t  ([S-1] ) :  albedo decay rate for the wet snow        {OK_SECHIBA}
1078xans_t  =  0.24
1079
1080# xrhosmax  ([-] ) :  maximum snow density      {OK_SECHIBA}
1081xrhosmax  =  750
1082
1083# xwsnowholdmax1 ([-] ) :  snow holding capacity 1      {OK_SECHIBA}
1084xwsnowholdmax1 =  0.03
1085
1086# xwsnowholdmax2 ([-] ) :  snow holding capacity 2      {OK_SECHIBA}
1087xwsnowholdmax2 =  0.10
1088
1089# xsnowrhohold  ([kg/m3] ) :  snow density      {OK_SECHIBA}
1090xsnowrhohold  =  200.0
1091
1092# ZSNOWTHRMCOND1 ([W/m/K] ) :  Thermal conductivity Coef 1      {OK_SECHIBA}
1093ZSNOWTHRMCOND1 =  0.02 
1094
1095# ZSNOWTHRMCOND2 ([W m5/(kg2 K)] ) :  Thermal conductivity Coef 2       {OK_SECHIBA}
1096ZSNOWTHRMCOND2 =  2.5E-6
1097
1098# ZSNOWTHRMCOND_AVAP ([W/m/K] ) :  Thermal conductivity Coef 1 water vapor      {OK_SECHIBA}
1099ZSNOWTHRMCOND_AVAP =  -0.06023
1100
1101# ZSNOWTHRMCOND_BVAP ([W/m] ) :  Thermal conductivity Coef 2 water vapor        {OK_SECHIBA}
1102ZSNOWTHRMCOND_BVAP =  -2.5425
1103
1104# ZSNOWTHRMCOND_CVAP ([K] ) :  Thermal conductivity Coef 3 water vapor  {OK_SECHIBA}
1105ZSNOWTHRMCOND_CVAP =  -289.99
1106
1107# ZSNOWCMPCT_RHOD ([kg/m3]) :  Snow compaction coefficent       {OK_SECHIBA}
1108ZSNOWCMPCT_RHOD =  150.0
1109
1110# ZSNOWCMPCT_ACM ([1/s]) :  Coefficent for the thermal conductivity     {OK_SECHIBA}
1111ZSNOWCMPCT_ACM =  2.8e-6
1112
1113# ZSNOWCMPCT_BCM ([1/K]) :  Coefficent for the thermal conductivity     {OK_SECHIBA}
1114ZSNOWCMPCT_BCM =  0.04
1115
1116# ZSNOWCMPCT_CCM ([m3/kg] ) :  Coefficent for the thermal conductivity  {OK_SECHIBA}
1117ZSNOWCMPCT_CCM =  460.
1118
1119# ZSNOWCMPCT_V0 ([Pa/s]) :  Vapor coefficent for the thermal conductivity       {OK_SECHIBA}
1120ZSNOWCMPCT_V0 =  3.7e7
1121
1122# ZSNOWCMPCT_VT ([1/K]) :  Vapor coefficent for the thermal conductivity        {OK_SECHIBA}
1123ZSNOWCMPCT_VT =  0.081
1124
1125# ZSNOWCMPCT_VR ([m3/kg]) :  Vapor coefficent for the thermal conductivity      {OK_SECHIBA}
1126ZSNOWCMPCT_VR =  0.018
1127
1128# CB ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1129CB =  5.0
1130
1131# CC ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1132CC =  5.0
1133
1134# CD ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1135CD =  5.0
1136
1137# RAYT_CSTE ([W.m^{-2}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1138RAYT_CSTE =  125
1139
1140# DEFC_PLUS ([K.W^{-1}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1141DEFC_PLUS =  23.E-3
1142
1143# DEFC_MULT ([K.W^{-1}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1144DEFC_MULT =  1.5
1145
1146# NLAI ([-]  ) :  Number of LAI levels  {OK_SECHIBA}
1147NLAI =  20
1148
1149# LAIMAX ([m^2/m^2]   ) :  Maximum LAI  {OK_SECHIBA}
1150LAIMAX =   
1151
1152# DEW_VEG_POLY_COEFF ([-]   ) :  coefficients of the polynome of degree 5 for the dew   {OK_SECHIBA}
1153DEW_VEG_POLY_COEFF =  0.887773, 0.205673, 0.110112, 0.014843, 0.000824, 0.000017 
1154
1155# DOWNREGULATION_CO2 ([FLAG]   ) :  Activation of CO2 downregulation    {OK_SECHIBA}
1156DOWNREGULATION_CO2 =  y
1157
1158# DOWNREGULATION_CO2_BASELEVEL ([ppm]   ) :  CO2 base level     {OK_SECHIBA }
1159DOWNREGULATION_CO2_BASELEVEL =  380.
1160
1161# GB_REF ([s m-1]   ) :  Leaf bulk boundary layer resistance    {}
1162GB_REF =  1./25.
1163
1164# CLAYFRACTION_DEFAULT ([-]   ) :  default fraction of clay     {OK_SECHIBA }
1165CLAYFRACTION_DEFAULT =  0.2 
1166
1167# SILTFRACTION_DEFAULT ([-]   ) :  default fraction of silt     {OK_SECHIBA }
1168SILTFRACTION_DEFAULT =  0.4
1169
1170# BULK_DEFAULT ([kg/m3]   ) :  default bulk density     {OK_SECHIBA }
1171BULK_DEFAULT =  1000.0
1172
1173# PH_DEFAULT ([-]   ) :  default soil pH        {OK_SECHIBA }
1174PH_DEFAULT =  5.5
1175
1176# SANDFRACTION_DEFAULT ([-]   ) :  default fraction of sand     {OK_SECHIBA }
1177SANDFRACTION_DEFAULT =  0.4 
1178
1179# SILTFRACTION_DEFAULT ([-]   ) :  default fraction of silt     {OK_SECHIBA }
1180SILTFRACTION_DEFAULT =  0.4 
1181
1182# MIN_VEGFRAC  ([-]  ) :  Minimal fraction of mesh a vegetation type can occupy         {OK_SECHIBA }
1183MIN_VEGFRAC  =  0.001 
1184
1185# STEMPDIAG_BID  ([K]) :  only needed for an initial LAI if there is no restart file    {OK_SECHIBA }
1186STEMPDIAG_BID  =  280.
1187
1188# LAI_LEVEL_DEPTH ([-]  ) :     {}
1189LAI_LEVEL_DEPTH =  0.15
1190
1191# Oi ([ubar]  ) :  Intercellular oxygen partial pressure        {}
1192Oi =  210000.
1193
1194# TOO_LONG  ([days]   ) :  longest sustainable time without regeneration (vernalization)        {OK_STOMATE}
1195TOO_LONG  =  5.
1196
1197# TAU_FIRE  ([days]    ) :  Time scale for memory of the fire index (days). Validated for one year in the DGVM.         {OK_STOMATE }
1198TAU_FIRE  =  30.
1199
1200# LITTER_CRIT ([gC/m^2]  ) :  Critical litter quantity for fire         {OK_STOMATE }
1201LITTER_CRIT =  200.
1202
1203# FIRE_RESIST_LIGNIN ([-]  ) :          {OK_STOMATE }
1204FIRE_RESIST_LIGNIN =  0.5
1205
1206# CO2FRAC ([-]  ) :  What fraction of a burned plant compartment goes into the atmosphere       {OK_STOMATE }
1207CO2FRAC =  0.95, 0.95, 0., 0.3, 0., 0., 0.95, 0.95
1208
1209# BCFRAC_COEFF ([-]  ) :        {OK_STOMATE }
1210BCFRAC_COEFF =  0.3, 1.3, 88.2 
1211
1212# FIREFRAC_COEFF  ([-]   ) :    {OK_STOMATE }
1213FIREFRAC_COEFF  =  0.45, 0.8, 0.6, 0.13
1214
1215# REF_GREFF ([1/year]  ) :  Asymptotic maximum mortality rate   {OK_STOMATE }
1216REF_GREFF =  0.035
1217
1218# RESERVE_TIME_TREE  ([days]    ) :  maximum time during which reserve is used (trees)          {OK_STOMATE }
1219RESERVE_TIME_TREE  =  30.
1220
1221# RESERVE_TIME_GRASS  ([days]   ) :  maximum time during which reserve is used (grasses)        {OK_STOMATE }
1222RESERVE_TIME_GRASS  =  20. 
1223
1224# PRECIP_CRIT  ([mm/year]  ) :  minimum precip  {OK_STOMATE }
1225PRECIP_CRIT  =  100.
1226
1227# GDD_CRIT_ESTAB ([-]  ) :  minimum gdd for establishment of saplings   {OK_STOMATE }
1228GDD_CRIT_ESTAB =  150. 
1229
1230# FPC_CRIT ([-]  ) :  critical fpc, needed for light competition and establishment      {OK_STOMATE }
1231FPC_CRIT =  0.95
1232
1233# ALPHA_GRASS ([-]   ) :  sapling characteristics : alpha's     {OK_STOMATE }
1234ALPHA_GRASS =  0.5
1235
1236# ALPHA_TREE ([-]   ) :  sapling characteristics : alpha's      {OK_STOMATE }
1237ALPHA_TREE =  1.
1238
1239# STRUCT_TO_LEAVES ([-]   ) :  Fraction of structural carbon in grass and crops as a share of the leaf  {OK_STOMATE }
1240STRUCT_TO_LEAVES =  0.05
1241
1242# LABILE_TO_TOTAL ([-]   ) :  Fraction of the labile pool in trees, grasses and crops as a share of the         {OK_STOMATE }
1243LABILE_TO_TOTAL =  0.01
1244
1245# TAU_HUM_MONTH ([days]  ) :  time scales for phenology and other processes     {OK_STOMATE }
1246TAU_HUM_MONTH =  20. 
1247
1248# TAU_HUM_WEEK ([days]   ) :  time scales for phenology and other processes     {OK_STOMATE }
1249TAU_HUM_WEEK =  7.
1250
1251# TAU_T2M_MONTH ([days]     ) :  time scales for phenology and other processes  {OK_STOMATE }
1252TAU_T2M_MONTH =  20.
1253
1254# TAU_T2M_WEEK ([days]   ) :  time scales for phenology and other processes     {OK_STOMATE }
1255TAU_T2M_WEEK =  7.
1256
1257# TAU_TSOIL_MONTH  ([days]     ) :  time scales for phenology and other processes       {OK_STOMATE }
1258TAU_TSOIL_MONTH  =  20. 
1259
1260# TAU_SOILHUM_MONTH ([days]   ) :  time scales for phenology and other processes        {OK_STOMATE }
1261TAU_SOILHUM_MONTH =  20. 
1262
1263# TAU_GPP_WEEK  ([days]   ) :  time scales for phenology and other processes    {OK_STOMATE }
1264TAU_GPP_WEEK  =  7. 
1265
1266# TAU_GDD ([days]   ) :  time scales for phenology and other processes  {OK_STOMATE }
1267TAU_GDD =  40. 
1268
1269# TAU_NGD ([days]   ) :  time scales for phenology and other processes  {OK_STOMATE }
1270TAU_NGD =  50.
1271
1272# COEFF_TAU_LONGTERM ([days]   ) :  time scales for phenology and other processes       {OK_STOMATE }
1273COEFF_TAU_LONGTERM =  3. 
1274
1275# BM_SAPL_CARBRES  ([-]   ) :           {OK_STOMATE }
1276BM_SAPL_CARBRES  =  5. 
1277
1278# BM_SAPL_SAPABOVE ([-]    ) :          {OK_STOMATE}
1279BM_SAPL_SAPABOVE =  0.5 
1280
1281# BM_SAPL_HEARTABOVE  ([-]    ) :       {OK_STOMATE }
1282BM_SAPL_HEARTABOVE  =  2.
1283
1284# BM_SAPL_HEARTBELOW  ([-]    ) :       {OK_STOMATE }
1285BM_SAPL_HEARTBELOW  =  2. 
1286
1287# BM_SAPL_LABILE  ([-]   ) :    {OK_STOMATE }
1288BM_SAPL_LABILE  =  5. 
1289
1290# INIT_SAPL_MASS_LABILE ([-]    ) :     {OK_STOMATE }
1291INIT_SAPL_MASS_LABILE =  5. 
1292
1293# INIT_SAPL_MASS_LEAF_NAT ([-]    ) :           {OK_STOMATE }
1294INIT_SAPL_MASS_LEAF_NAT =  0.1 
1295
1296# INIT_SAPL_MASS_LEAF_AGRI ([-]    ) :          {OK_STOMATE }
1297INIT_SAPL_MASS_LEAF_AGRI =  1. 
1298
1299# INIT_SAPL_MASS_CARBRES ([-]    ) :    {OK_STOMATE }
1300INIT_SAPL_MASS_CARBRES =  5. 
1301
1302# INIT_SAPL_MASS_ROOT ([-]   ) :        {OK_STOMATE }
1303INIT_SAPL_MASS_ROOT =  0.1 
1304
1305# INIT_SAPL_MASS_FRUIT ([-]    ) :      {OK_STOMATE }
1306INIT_SAPL_MASS_FRUIT =  0.3 
1307
1308# CN_SAPL_INIT  ([-]   ) :      {OK_STOMATE }
1309CN_SAPL_INIT  =  0.5 
1310
1311# MIGRATE_TREE  ([m/year]   ) :         {OK_STOMATE }
1312MIGRATE_TREE  =  10000.
1313
1314# MIGRATE_GRASS ([m/year]   ) :         {OK_STOMATE }
1315MIGRATE_GRASS =  10000.
1316
1317# LAI_INITMIN_TREE ([m^2/m^2]  ) :      {OK_STOMATE }
1318LAI_INITMIN_TREE =  0.3
1319
1320# LAI_INITMIN_GRASS  ([m^2/m^2]    ) :          {OK_STOMATE }
1321LAI_INITMIN_GRASS  =  0.1
1322
1323# DIA_COEFF ([-]   ) :          {OK_STOMATE }
1324DIA_COEFF =  4., 0.5
1325
1326# MAXDIA_COEFF ([-]   ) :       {OK_STOMATE }
1327MAXDIA_COEFF =  100., 0.01 
1328
1329# BM_SAPL_LEAF ([-]  ) :        {OK_STOMATE }
1330BM_SAPL_LEAF =  4., 4., 0.8, 5. 
1331
1332# CN ([-]  ) :  C/N ratio       {OK_STOMATE }
1333CN =  40., 40., 40., 40., 40., 40., 40., 40.
1334
1335# FRAC_SOIL_STRUCT_SUA ([-]) :  frac_soil(istructural,isurface,iabove)  {OK_STOMATE }
1336FRAC_SOIL_STRUCT_SUA =  0.55
1337
1338# FRAC_SOIL_METAB_SUA  ([-]   ) :  frac_soil(imetabolic,isurface,iabove)        {OK_STOMATE }
1339FRAC_SOIL_METAB_SUA  =  0.4 
1340
1341# TURN_METABOLIC ([days] ) :    {OK_STOMATE }
1342TURN_METABOLIC =  0.066
1343
1344# TURN_STRUCT  ([days]) :       {OK_STOMATE }
1345TURN_STRUCT  =  0.245 
1346
1347# TURN_WOODY ([days]) :         {OK_STOMATE }
1348TURN_WOODY =  0.75
1349
1350# METABOLIC_REF_FRAC ([-]) :    {OK_STOMATE }
1351METABOLIC_REF_FRAC =  0.85   
1352
1353# Z_DECOMP ([m]   ) :  scaling depth for soil activity  {OK_STOMATE }
1354Z_DECOMP =  0.2
1355
1356# FRAC_SOIL_STRUCT_A  ([-]) :  frac_soil(istructural,iactive,ibelow)    {OK_STOMATE }
1357FRAC_SOIL_STRUCT_A  =  0.45
1358
1359# FRAC_SOIL_STRUCT_SA ([-]   ) :  frac_soil(istructural,islow,iabove)   {OK_STOMATE}
1360FRAC_SOIL_STRUCT_SA =  0.7   
1361
1362# FRAC_SOIL_STRUCT_SB ([-]   ) :  frac_soil(istructural,islow,ibelow)   {OK_STOMATE }
1363FRAC_SOIL_STRUCT_SB =  0.7   
1364
1365# FRAC_SOIL_METAB_AB  ([-]   ) :  frac_soil(imetabolic,iactive,ibelow)  {OK_STOMATE }
1366FRAC_SOIL_METAB_AB  =  0.45   
1367
1368# METABOLIC_LN_RATIO ([-]   ) :         {OK_STOMATE }
1369METABOLIC_LN_RATIO =  0.018   
1370
1371# SOIL_Q10 ([-]) :      {OK_STOMATE }
1372SOIL_Q10 =  0.69 (
1373
1374# SOIL_Q10_UPTAKE ([-]) :       {OK_STOMATE }
1375SOIL_Q10_UPTAKE =  0.69 (
1376
1377# TSOIL_REF ([C]   ) :          {OK_STOMATE }
1378TSOIL_REF =  30. 
1379
1380# LITTER_STRUCT_COEF  ([-]   ) :        {OK_STOMATE }
1381LITTER_STRUCT_COEF  =  3. 
1382
1383# MOIST_COEFF ([-]   ) :        {OK_STOMATE }
1384MOIST_COEFF =  1.1, 2.4, 0.29
1385
1386# MOISTCONT_MIN ([-]) :  minimum soil wetness to limit the heterotrophic respiration    {OK_STOMATE }
1387MOISTCONT_MIN =  0.25
1388
1389# FRAC_TURNOVER_DAILY  ([-]) :          {OK_STOMATE }
1390FRAC_TURNOVER_DAILY  =  0.55
1391
1392# TAX_MAX ([-]   ) :  maximum fraction of allocatable biomass used for maintenance respiration  {OK_STOMATE }
1393TAX_MAX =  0.8
1394
1395# MIN_GROWTHINIT_TIME  ([days]  ) :  minimum time since last beginning of a growing season      {OK_STOMATE }
1396MIN_GROWTHINIT_TIME  =  300. 
1397
1398# MOIAVAIL_ALWAYS_TREE ([-]   ) :  moisture availability above which moisture tendency doesn't matter   {OK_STOMATE }
1399MOIAVAIL_ALWAYS_TREE =  1.0 
1400
1401# MOIAVAIL_ALWAYS_GRASS  ([-]   ) :  moisture availability above which moisture tendency doesn't matter         {OK_STOMATE }
1402MOIAVAIL_ALWAYS_GRASS  =  0.6 
1403
1404# T_ALWAYS_ADD ([C]    ) :  monthly temp. above which temp. tendency doesn't matter     {OK_STOMATE }
1405T_ALWAYS_ADD =  10.
1406
1407# GDDNCD_REF  ([-]   ) :        {OK_STOMATE }
1408GDDNCD_REF  =  603. 
1409
1410# GDDNCD_CURVE ([-]  ) :        {OK_STOMATE }
1411GDDNCD_CURVE =  0.0091 
1412
1413# GDDNCD_OFFSET ([-]  ) :       {OK_STOMATE }
1414GDDNCD_OFFSET =  64. 
1415
1416# BM_SAPL_RESCALE  ([-]  ) :    {OK_STOMATE }
1417BM_SAPL_RESCALE  =  40. 
1418
1419# MAINT_RESP_MIN_VMAX ([-]  ) :         {OK_STOMATE }
1420MAINT_RESP_MIN_VMAX =  0.3
1421
1422# MAINT_RESP_COEFF  ([-] ) :    {OK_STOMATE }
1423MAINT_RESP_COEFF  =  1.4 
1424
1425# ACTIVE_TO_PASS_CLAY_FRAC ([-] ) :     {OK_STOMATE }
1426ACTIVE_TO_PASS_CLAY_FRAC =  0.68   
1427
1428# ACTIVE_TO_PASS_REF_FRAC ([-]) :  Fixed fraction from Active to Passive pool   {OK_STOMATE }
1429ACTIVE_TO_PASS_REF_FRAC =  0.003
1430
1431# SURF_TO_SLOW_REF_FRAC ([-]) :  Fixed fraction from Surface to Slow pool       {OK_STOMATE }
1432SURF_TO_SLOW_REF_FRAC =  0.4
1433
1434# ACTIVE_TO_CO2_REF_FRAC ([-]) :  Fixed fraction from Active pool to CO2 emission       {OK_STOMATE }
1435ACTIVE_TO_CO2_REF_FRAC =  0.85
1436
1437# SLOW_TO_PASS_REF_FRAC ([-]) :  Fixed fraction from Slow to Passive pool       {OK_STOMATE }
1438SLOW_TO_PASS_REF_FRAC =  0.003
1439
1440# SLOW_TO_CO2_REF_FRAC ([-]) :  Fixed fraction from Slow pool to CO2 emission   {OK_STOMATE }
1441SLOW_TO_CO2_REF_FRAC =  0.55
1442
1443# PASS_TO_ACTIVE_REF_FRAC ([-]) :  Fixed fraction from Passive to Active pool   {OK_STOMATE }
1444PASS_TO_ACTIVE_REF_FRAC =  0.45
1445
1446# PASS_TO_SLOW_REF_FRAC ([-]) :  Fixed fraction from Passive to Slow pool       {OK_STOMATE }
1447PASS_TO_SLOW_REF_FRAC =  0.
1448
1449# ACTIVE_TO_CO2_CLAY_SILT_FRAC ([-]) :  Clay-Silt-dependant fraction from Active pool to CO2 emission   {OK_STOMATE }
1450ACTIVE_TO_CO2_CLAY_SILT_FRAC =  0.68
1451
1452# SLOW_TO_PASS_CLAY_FRAC ([-]) :  Clay-dependant fraction from Slow to Passive pool     {OK_STOMATE }
1453SLOW_TO_PASS_CLAY_FRAC =  -0.009
1454
1455# SOM_TURN_IACTIVE ( [year-1] ) :  turnover in active pool      {OK_STOMATE }
1456SOM_TURN_IACTIVE =  7.3
1457
1458# SOM_TURN_ISLOW ([year-1]) :  turnover in slow pool    {OK_STOMATE }
1459SOM_TURN_ISLOW =  0.2
1460
1461# SOM_TURN_IPASSIVE ([year-1] ) :  turnover in passive pool     {OK_STOMATE }
1462SOM_TURN_IPASSIVE =  0.0045
1463
1464# FSLOW ([-] ) :  converting factor from active to slow pool turnover   {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1465FSLOW =  37
1466
1467# FPASSIVE ([-] ) :  converting factor from active to slow pool turnover        {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1468FPASSIVE =  1617.45 
1469
1470# STOMATE_TAU ([seconds] ) :  turnover of the active pool       {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1471STOMATE_TAU =  4.699E6
1472
1473# DEPTH_MODIFIER ([-] ) :  turnover rate modifier depending on depth    {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1474DEPTH_MODIFIER =  1.E6
1475
1476# SOM_TURN_IACTIVE_CLAY_FRAC ([-] ) :  clay-dependant parameter impacting on turnover rate of active pool - Tm parameter of Parton et al. 1993 (-)      {OK_STOMATE }
1477SOM_TURN_IACTIVE_CLAY_FRAC =  0.75
1478
1479# CN_TARGET_IACTIVE_REF ([-] ) :  CN target ratio of active pool for soil min N         {OK_STOMATE }
1480CN_TARGET_IACTIVE_REF =  15.
1481
1482# CN_TARGET_ISLOW_REF ([-] ) :  CN target ratio of slow pool for soil min N     {OK_STOMATE }
1483CN_TARGET_ISLOW_REF =  20.
1484
1485# CN_TARGET_IPASSIVE_REF ([-] ) :  CN target ratio of passive pool for soil min N       {OK_STOMATE }
1486CN_TARGET_IPASSIVE_REF =  10.
1487
1488# CN_TARGET_IACTIVE_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for active pool    {OK_STOMATE }
1489CN_TARGET_IACTIVE_NMIN =  -6.
1490
1491# CN_TARGET_ISLOW_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for slow pool        {OK_STOMATE }
1492CN_TARGET_ISLOW_NMIN =  -4.
1493
1494# CN_TARGET_IPASSIVE_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for passive pool          {OK_STOMATE }
1495CN_TARGET_IPASSIVE_NMIN =  -1.5
1496
1497# H_SAXTON ([m^3/m^3]  ) :  Coefficient h for computing soil moisture content at saturation     {OK_STOMATE }
1498H_SAXTON =  0.332
1499
1500# J_SAXTON ([m^3/m^3]  ) :  Coefficient j for computing soil moisture content at saturation     {OK_STOMATE }
1501J_SAXTON =  -7.251*1e-4 
1502
1503# K_SAXTON ([m^3/m^3]  ) :  Coefficient k for computing soil moisture content at saturation     {OK_STOMATE }
1504K_SAXTON =  O.1276
1505
1506# DIFFUSIONO2_POWER_1 ([-]  ) :  Power used in the equation defining the diffusion of oxygen in soil    {OK_STOMATE }
1507DIFFUSIONO2_POWER_1 =  3.33
1508
1509# DIFFUSIONO2_POWER_2 ([-]  ) :  Power used in the equation defining the diffusion of oxygen in soil    {OK_STOMATE }
1510DIFFUSIONO2_POWER_2 =  2.0
1511
1512# F_NOFROST ([-]  ) :  Temperature-related Factor impacting on Oxygen diffusion rate    {OK_STOMATE }
1513F_NOFROST =  1.2
1514
1515# F_FROST ([-]  ) :  Temperature-related Factor impacting on Oxygen diffusion rate      {OK_STOMATE }
1516F_FROST =  0.8
1517
1518# A_ANVF ([-]  ) :  Coefficient used in the calculation of Volumetric fraction of anaerobic microsites  {OK_STOMATE }
1519A_ANVF =  0.85
1520
1521# B_ANVF ([-]  ) :  Coefficient used in the calculation of Volumetric fraction of anaerobic microsites  {OK_STOMATE }
1522B_ANVF =  1.
1523
1524# A_FIXNH4 ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1525A_FIXNH4 =  0.41
1526
1527# B_FIXNH4 ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1528B_FIXNH4 =  -0.47
1529
1530# CLAY_MAX ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1531CLAY_MAX =  0.63
1532
1533# FWNIT_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1534FWNIT_0 =  -0.0243
1535
1536# FWNIT_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1537FWNIT_1 =  0.9975
1538
1539# FWNIT_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1540FWNIT_2 =  -5.5368
1541
1542# FWNIT_3 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1543FWNIT_3 =  17.651
1544
1545# FWNIT_4 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1546FWNIT_4 =  -12.904
1547
1548# FT_NIT_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1549FT_NIT_0 =  -0.0233
1550
1551# FT_NIT_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1552FT_NIT_1 =  0.3094
1553
1554# FT_NIT_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1555FT_NIT_2 =  -0.2234
1556
1557# FT_NIT_3 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1558FT_NIT_3 =  0.1566
1559
1560# FT_NIT_4 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1561FT_NIT_4 =  -0.0272
1562
1563# FPH_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1564FPH_0 =  -1.2314
1565
1566# FPH_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1567FPH_1 =  0.7347
1568
1569# FPH_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1570FPH_2 =  -0.0604
1571
1572# FTV_0 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1573FTV_0 =  2.72
1574
1575# FTV_1 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1576FTV_1 =  34.6
1577
1578# FTV_2 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1579FTV_2 =  9615.
1580
1581# K_NITRIF ([day**-1]  ) :  Nitrification rate at 20 ◩C and field capacity    {OK_STOMATE }
1582K_NITRIF =  2.0
1583
1584# N2O_NITRIF_P ([gN-N2O (gN-NO3)-1]  ) :  Reference n2o production per N-NO3 produced g N-N2O   {OK_STOMATE }
1585N2O_NITRIF_P =  0.0006
1586
1587# NO_NITRIF_P ([gN-NO (gN-NO3)-1]  ) :  Reference NO production per N-NO3 produced g N-N2O      {OK_STOMATE }
1588NO_NITRIF_P =  0.0025
1589
1590# CHEMO_T0 ([-]  ) :  Coefficient used in the calculation of the Response of NO production from chemodenitrification to Temperature     {OK_STOMATE }
1591CHEMO_T0 =  -31494
1592
1593# CHEMO_PH0 ([-]  ) :  Coefficient used in the calculation of the Response of NO production from chemodenitrification to pH     {OK_STOMATE }
1594CHEMO_PH0 =  -1.62
1595
1596# CHEMO_0 ([-]  ) :  Coefficient used in the calculation of NO production from chemodenitrification     {OK_STOMATE }
1597CHEMO_0 =  30.
1598
1599# CHEMO_1 ([-]  ) :  Coefficient used in the calculation of NO production from chemodenitrification     {OK_STOMATE }
1600CHEMO_1 =  16565
1601
1602# FT_DENIT_0 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1603FT_DENIT_0 =  2.
1604
1605# FT_DENIT_1 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1606FT_DENIT_1 =  22.5
1607
1608# FT_DENIT_2 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1609FT_DENIT_2 =  10
1610
1611# FPH_NO3_0 ([-]  ) :  Coefficient used in the response of relative growth rate of NO3 denitrifiers to pH       {OK_STOMATE }
1612FPH_NO3_0 =  4.25
1613
1614# FPH_NO3_1 ([-]  ) :  Coefficient used in the response of relative growth rate of NO3 denitrifiers to pH       {OK_STOMATE }
1615FPH_NO3_1 =  0.5
1616
1617# FPH_NO_0 ([-]  ) :  Coefficient used in the response of relative growth rate of NO denitrifiers to pH         {OK_STOMATE }
1618FPH_NO_0 =  5.25
1619
1620# FPH_NO_1 ([-]  ) :  Coefficient used in the response of relative growth rate of NO denitrifiers to pH         {OK_STOMATE }
1621FPH_NO_1 =  1.
1622
1623# FPH_N2O_0 ([-]  ) :  Coefficient used in the response of relative growth rate of N2O denitrifiers to pH       {OK_STOMATE }
1624FPH_N2O_0 =  6.25
1625
1626# FPH_N2O_1 ([-]  ) :  Coefficient used in the response of relative growth rate of N2O denitrifiers to pH       {OK_STOMATE }
1627FPH_N2O_1 =  1.5
1628
1629# KN ([kgN/m**3]  ) :  Half Saturation of N oxydes      {OK_STOMATE }
1630KN =  0.083
1631
1632# MU_NO3_MAX ([hour**-1]  ) :  Maximum Relative growth rate of NO3 denitrifiers         {OK_STOMATE }
1633MU_NO3_MAX =  0.67
1634
1635# MU_NO_MAX ([hour**-1]  ) :  Maximum Relative growth rate of NO denitrifiers   {OK_STOMATE }
1636MU_NO_MAX =  0.34
1637
1638# MU_N2O_MAX ([hour**-1]  ) :  Maximum Relative growth rate of N2O denitrifiers         {OK_STOMATE }
1639MU_N2O_MAX =  0.34
1640
1641# Y_NO3 ([kgC / kgN]  ) :  Maximum growth yield of NO3 denitrifiers on N oxydes         {OK_STOMATE }
1642Y_NO3 =  0.401
1643
1644# Y_NO ([kgC / kgN]  ) :  Maximum growth yield of NO denitrifiers on N oxydes   {OK_STOMATE }
1645Y_NO =  0.428
1646
1647# Y_N2O ([kgC / kgN]  ) :  Maximum growth yield of N2O denitrifiers on N oxydes         {OK_STOMATE }
1648Y_N2O =  0.151
1649
1650# M_NO3 ([kgN / kgC / hour]  ) :  Maintenance coefficient on NO3        {OK_STOMATE }
1651M_NO3 =  0.09
1652
1653# M_NO ([kgN / kgC / hour]  ) :  Maintenance coefficient on NO  {OK_STOMATE }
1654M_NO =  0.035
1655
1656# M_N2O ([kgN / kgC / hour]  ) :  Maintenance coefficient on N2O        {OK_STOMATE }
1657M_N2O =  0.079
1658
1659# MAINT_C ([kgC / kgC / hour]  ) :  Maintenance coefficient of carbon   {OK_STOMATE }
1660MAINT_C =  0.0076
1661
1662# YC ([kgC / kgC ]  ) :  Maximum growth yield on soluble carbon         {OK_STOMATE }
1663YC =  0.503
1664
1665# F_CLAY_0 ([-]  ) :  Coefficient used in the eq. defining the response of N-emission to clay fraction  {OK_STOMATE }
1666F_CLAY_0 =  0.13
1667
1668# F_CLAY_1 ([-]  ) :  Coefficient used in the eq. defining the response of N-emission to clay fraction  {OK_STOMATE }
1669F_CLAY_1 =  -0.079
1670
1671# RATIO_NH4_FERT ([-]  ) :  Proportion of ammonium in the fertilizers (ammo-nitrate)    {OK_STOMATE }
1672RATIO_NH4_FERT =  0.875
1673
1674# CN_RATIO_MANURE ([-]  ) :  C:N ratio of organic fertilizers coming from Fuchs,et al,  {OK_STOMATE }
1675CN_RATIO_MANURE =  13.7
1676
1677# VMAX_UPTAKE ([umol (g DryWeight_root)-1 h-1)]  ) :  Vmax of nitrogen uptake by plants for Ammonium (ind.1) and Nitrate (ind.2)        {OK_STOMATE }
1678VMAX_UPTAKE =  3. 3.
1679
1680# K_N_MIN ([umol per litter]  ) :  [NH4+] and [NO3-] for which the Nuptake equals vmax/2.       {OK_STOMATE }
1681K_N_MIN =  30. 30.
1682
1683# LOW_K_N_MIN ([umol**-1]  ) :  Rate of N uptake not associated with Michaelis- Menten Kinetics for Ammonium    {OK_STOMATE }
1684LOW_K_N_MIN =  0.0002 0.0002
1685
1686# EMM_FAC ([-]  ) :  Factor for reducing NH3 emission           {OK_NCYCLE}
1687EMM_FAC =  0.2
1688
1689# FACT_KN_NO ([-]  ) :  Factor for adusting kn constant for NOx production      {OK_NCYCLE}
1690FACT_KN_NO =  0.012
1691
1692# FACT_KN_N2O ([-]  ) :  Factor for adusting kn constant for N2O production     {OK_NCYCLE}
1693FACT_KN_N2O =  0.04
1694
1695# KFWDENIT ([-]) :  Factor for adjusting sensitivity of denitrification to water content        {OK_NCYCLE}
1696KFWDENIT =  -5.
1697
1698# FWDENITFC ([-]) :  Value at field capacity of the sensitivity function of denitrification to water content    {OK_NCYCLE}
1699FWDENITFC =  0.05
1700
1701# FRACN_DRAINAGE ([-]  ) :  Fraction of NH3/NO3 loss by drainage        {OK_NCYCLE}
1702FRACN_DRAINAGE =  1.0
1703
1704# FRACN_RUNOFF ([-]  ) :  Fraction of NH3/NO3 loss by runoff    {OK_NCYCLE}
1705FRACN_RUNOFF =  0.3
1706
1707# LEAF_N_DMAX (???) :  ?????????????    {OK_STOMATE }
1708LEAF_N_DMAX =  0.25
1709
1710# NCIRC ([-]) :  Number of basal area classes in allocation scheme      {OK_STOMATE, functional allocation }
1711NCIRC =  2 
1712
1713# SYNC_THRESHOLD ([-]  ) :  The threshold value for a warning when we sync biomass      {OK_STOMATE, functional allocation }
1714SYNC_THRESHOLD =  0.1 
1715
1716# TEST_GRID ([-]) :  grid cell for which extra output is written to the out_execution file      {OK_STOMATE}
1717TEST_GRID =  1
1718
1719# TEST_PFT ([-]   ) :  pft for which extra output is written to the out_execution file  {OK_STOMATE}
1720TEST_PFT =  6
1721
1722# LD_ALLOC ([-]   ) :  A flag to turn of debug statement        {}
1723LD_ALLOC =  6
1724
1725# MAX_DELTA_KF ([m]  ) :  Maximum change in KF from one time step to another    {OK_STOMATE, functional allocation }
1726MAX_DELTA_KF =  0.1 
1727
1728# MAINT_FROM_GPP ([-]  ) :  Some carbon needs to remain to support the growth, hence,   {OK_STOMATE, functional allocation }
1729MAINT_FROM_GPP =  0.8
1730
1731# NEW_TURNOVER_TIME_REF ([days]  ) :    {OK_STOMATE }
1732NEW_TURNOVER_TIME_REF =  20. 
1733
1734# LEAF_AGE_CRIT_TREF ([days]  ) :       {OK_STOMATE }
1735LEAF_AGE_CRIT_TREF =  20. 
1736
1737# LEAF_AGE_CRIT_COEFF  ([-] ) :         {OK_STOMATE }
1738LEAF_AGE_CRIT_COEFF  =  1.5, 0.75, 10. 
1739
1740# VMAX_OFFSET  ([-]  ) :  offset (minimum relative vcmax)       {OK_STOMATE }
1741VMAX_OFFSET  =  0.3
1742
1743# LEAFAGE_FIRSTMAX ([-] ) :  leaf age at which vmax attains vcmax_opt (in fraction of critical leaf age)        {OK_STOMATE }
1744LEAFAGE_FIRSTMAX =  0.03 
1745
1746# LEAFAGE_LASTMAX  ([-]  ) :  leaf age at which vmax falls below vcmax_opt (in fraction of critical leaf age)   {OK_STOMATE }
1747LEAFAGE_LASTMAX  =  0.5 
1748
1749# LEAFAGE_OLD  ([-]  ) :  leaf age at which vmax attains its minimum (in fraction of critical leaf age)         {OK_STOMATE }
1750LEAFAGE_OLD  =  1.
1751
1752# SUGAR_LOAD_MIN () :  Lower bound for sugar loading when used to regulate NUE  {OK_STOMATE}
1753SUGAR_LOAD_MIN =  0.0
1754
1755# SUGAR_LOAD_MAX () :  Upper bound for sugar loading when used to regulate NUE  {OK_STOMATE}
1756SUGAR_LOAD_MAX =  1.0
1757
1758# GPPFRAC_DORMANCE  ([-]) :  rapport maximal GPP/GGP_max pour dormance  {OK_STOMATE }
1759GPPFRAC_DORMANCE  =  0.2 
1760
1761# TAU_CLIMATOLOGY ([days]) :  tau for "climatologic variables   {OK_STOMATE }
1762TAU_CLIMATOLOGY =  20
1763
1764# HVC1  ([-]  ) :  parameters for herbivore activity    {OK_STOMATE }
1765HVC1  =  0.019
1766
1767# HVC2  ([-]  ) :  parameters for herbivore activity    {OK_STOMATE }
1768HVC2  =  1.38
1769
1770# LEAF_FRAC_HVC ([-] ) :  parameters for herbivore activity     {OK_STOMATE }
1771LEAF_FRAC_HVC =  0.33
1772
1773# TLONG_REF_MAX ([K]  ) :  maximum reference long term temperature      {OK_STOMATE }
1774TLONG_REF_MAX =  303.1
1775
1776# TLONG_REF_MIN  ([K]  ) :  minimum reference long term temperature     {OK_STOMATE }
1777TLONG_REF_MIN  =  253.1
1778
1779# NCD_MAX_YEAR ([days]) :       {OK_STOMATE }
1780NCD_MAX_YEAR =  3. 
1781
1782# GDD_THRESHOLD  ([days] ) :    {OK_STOMATE }
1783GDD_THRESHOLD  =  5. 
1784
1785# GREEN_AGE_EVER  ([-]  ) :     {OK_STOMATE }
1786GREEN_AGE_EVER  =  2. 
1787
1788# GREEN_AGE_DEC ([-] ) :        {OK_STOMATE }
1789GREEN_AGE_DEC =  0.5 
1790
1791# ESTAB_MAX_TREE ([-]   ) :  Maximum tree establishment rate    {OK_DGVM}
1792ESTAB_MAX_TREE =  0.12 
1793
1794# ESTAB_MAX_GRASS ([-]  ) :  Maximum grass establishment rate   {OK_DGVM}
1795ESTAB_MAX_GRASS =  0.12 
1796
1797# ESTABLISH_SCAL_FACT ([-] ) :          {OK_DGVM }
1798ESTABLISH_SCAL_FACT =  5.
1799
1800# MAX_TREE_COVERAGE  ([-] ) :           {OK_DGVM }
1801MAX_TREE_COVERAGE  =  0.98
1802
1803# IND_0_ESTAB ([-]  ) :         {OK_DGVM }
1804IND_0_ESTAB =  0.2
1805
1806# ANNUAL_INCREASE ([FLAG]) :  for diagnosis of fpc increase, compare today's fpc to last year's maximum (T) or to fpc of last time step (F)?    {OK_DGVM}
1807ANNUAL_INCREASE =  y
1808
1809# MIN_COVER  ([-]  ) :  For trees, minimum fraction of crown area occupied      {OK_DGVM}
1810MIN_COVER  =  0.05 
1811
1812# IND_0  ([-]  ) :  initial density of individuals      {OK_DGVM}
1813IND_0  =  0.02 
1814
1815# MIN_AVAIL ([-]  ) :  minimum availability     {OK_DGVM}
1816MIN_AVAIL =  0.01
1817
1818# RIP_TIME_MIN ([year]  ) :     {OK_DGVM}
1819RIP_TIME_MIN =  1.25 
1820
1821# NPP_LONGTERM_INIT ([gC/m^2/year]) :           {OK_DGVM}
1822NPP_LONGTERM_INIT =  10.
1823
1824# EVERYWHERE_INIT ([-] ) :      {OK_DGVM}
1825EVERYWHERE_INIT =  0.05 
1826
1827# PRINTLEV ([0, 1, 2, 3, 4]) :  Print level for text output     {}
1828PRINTLEV =  2
1829
1830# PRINTLEV_modname ([0, 1, 2, 3, 4]) :  Specific print level of text output for the module "modname". Default as PRINTLEV.      {}
1831PRINTLEV_modname =  PRINTLEV
1832
1833# DRY_SOIL_HEAT_CAPACITY ([J.m^{-3}.K^{-1}] ) :  Dry soil Heat capacity of soils        {OK_SECHIBA }
1834DRY_SOIL_HEAT_CAPACITY =  1.80e+6
1835
1836# DRY_SOIL_HEAT_COND ([W.m^{-2}.K^{-1}] ) :  Dry soil Thermal Conductivity of soils     {OK_SECHIBA}
1837DRY_SOIL_HEAT_COND =  0.40 
1838
1839# SNOW_HEAT_COND ([W.m^{-2}.K^{-1}]) :  Thermal Conductivity of snow    {OK_SECHIBA  }
1840SNOW_HEAT_COND =  0.3
1841
1842# SNOW_DENSITY ([-] ) :  Snow density for the soil thermodynamics       {OK_SECHIBA }
1843SNOW_DENSITY =  330.0
1844
1845# NOBIO_WATER_CAPAC_VOLUMETRI ([s/m^2]) :       {}
1846NOBIO_WATER_CAPAC_VOLUMETRI =  150.
1847
1848# SECHIBA_QSINT  ([m]) :  Interception reservoir coefficient    {OK_SECHIBA }
1849SECHIBA_QSINT  =  0.02
1850
1851# OK_FREEZE ([FLAG]) :  Activate the complet soil freezing scheme       {OK_SECHIBA }
1852OK_FREEZE =  TRUE
1853
1854# READ_REFTEMP ([FLAG]) :  Initialize soil temperature using climatological temperature         {}
1855READ_REFTEMP =  True/False depening on OK_FREEZE
1856
1857# OK_FREEZE_THERMIX ([FLAG]) :  Activate thermal part of the soil freezing scheme       {}
1858OK_FREEZE_THERMIX =  True if OK_FREEZE else false
1859
1860# OK_ECORR ([FLAG]) :  Energy correction for freezing   {OK_FREEZE_THERMIX}
1861OK_ECORR =  True if OK_FREEZE else false
1862
1863# OK_FREEZE_THAW_LATENT_HEAT ([FLAG]) :  Activate latent heat part of the soil freezing scheme  {}
1864OK_FREEZE_THAW_LATENT_HEAT =  FALSE 
1865
1866# fr_dT ([K] ) :  Freezing window       {OK_SECHIBA}
1867fr_dT =  2.0
1868
1869# SOILC_MAX ([gC/m3] ) :  Soil carbon above which soil thermal properties equals to organic soil properties     {OK_SOIL_CARBON_DISCRETIZATION and USE_SOILC_TEMPDIFF}
1870SOILC_MAX =  130000
1871
1872# OK_FREEZE_CWRR ([FLAG]) :  CWRR freezing scheme by I. Gouttevin       {}
1873OK_FREEZE_CWRR =  True if OK_FREEZE else false
1874
1875# OK_THERMODYNAMICAL_FREEZING ([FLAG]) :  Calculate frozen fraction thermodynamically   {OK_FREEZE_CWRR}
1876OK_THERMODYNAMICAL_FREEZING =  True
1877
1878# CHECK_CWRR ([FLAG]) :  Calculate diagnostics to check CWRR water balance      {}
1879CHECK_CWRR =  n
1880
1881# SECHIBA_ZCANOP ([m]) :  Soil level used for canopy development (if STOMATE disactivated)      {OK_SECHIBA and .NOT. OK_STOMATE  }
1882SECHIBA_ZCANOP =  0.5
1883
1884# SECHIBA_QSINT  ([m]) :  Interception reservoir coefficient    {OK_SECHIBA }
1885SECHIBA_QSINT  =  0.02
1886
1887# SECHIBA_VEGMAX ([-]) :  Maximum vegetation distribution within the mesh (0-dim mode)  {IMPOSE_VEG}
1888SECHIBA_VEGMAX =  0.2, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.8, 0.0, 0.0, 0.0
1889
1890# SECHIBA_FRAC_NOBIO ([-]) :  Fraction of other surface types within the mesh (0-dim mode)      {IMPOSE_VEG}
1891SECHIBA_FRAC_NOBIO =  0.0
1892
1893# SECHIBA_LAI ([-]) :  LAI for all vegetation types (0-dim mode)        {IMPOSE_VEG}
1894SECHIBA_LAI =  0., 8., 8., 4., 4.5, 4.5, 4., 4.5, 4., 2., 2., 2., 2.
1895
1896# SOIL_FRACTIONS ([-]) :  Fraction of the 3 soil types (0-dim mode)     {IMPOSE_VEG and IMPOSE_SOILT}
1897SOIL_FRACTIONS =  -9999._sechiba
1898
1899# CLAY_FRACTION ([-] ) :  Fraction of the clay fraction (0-dim mode)    {IMPOSE_VEG and IMPOSE_SOIL}
1900CLAY_FRACTION =  0.2
1901
1902# SAND_FRACTION ([-] ) :  Fraction of the clay fraction (0-dim mode)    {IMPOSE_VEG and IMPOSE_SOIL}
1903SAND_FRACTION =  0.4
1904
1905# BULK  ([-] ) :  Bulk density (0-dim mode)     {IMPOSE_VEG and IMPOSE_SOIL}
1906BULK  =  XXX
1907
1908# SOIL_PH ([-] ) :  Soil pH (0-dim mode)        {IMPOSE_VEG and IMPOSE_SOIL}
1909SOIL_PH =  XXX
1910
1911# REINF_SLOPE ([-]) :  Slope coef for reinfiltration    {IMPOSE_VEG}
1912REINF_SLOPE =  0.1
1913
1914# SLOWPROC_HEIGHT ([m]) :  Height for all vegetation types      {OK_SECHIBA}
1915SLOWPROC_HEIGHT =  0., 30., 30., 20., 20., 20., 15., 15., 15., .5, .6, 1.0, 1.0
1916
1917# GET_SLOPE ([FLAG]) :  Read slopes from file and do the interpolation  {}
1918GET_SLOPE =  n
1919
1920# NINPUT_UPDATE ([years]) :  Update N input frequency   {ok_ncycle .AND. (.NOT. impose_cn) .AND. .NOT. impsoilt}
1921NINPUT_UPDATE =  0Y
1922
1923# NAMMONIUM ([gN m-2 d-1] ) :  Amount of N ammonium deposition          {ok_ncycle .AND. (.NOT. impose_cn)}
1924NAMMONIUM =  0
1925
1926# NNITRATE ([gN m-2 d-1] ) :  Amount of N nitrate deposition    {ok_ncycle .AND. (.NOT. impose_cn)}
1927NNITRATE =  0
1928
1929# NFERT ([gN m-2 d-1] ) :  Amount of N fertiliser       {ok_ncycle .AND. (.NOT. impose_cn)}
1930NFERT =  0
1931
1932# NMANURE ([gN m-2 d-1] ) :  Amount of N manure         {ok_ncycle .AND. (.NOT. impose_cn)}
1933NMANURE =  0
1934
1935# NBNF ([gN m-2 d-1] ) :  Amount of N biological fixation       {ok_ncycle .AND. (.NOT. impose_cn)}
1936NBNF =  0
1937
1938# LAI_FILE ([FILE]) :  Name of file from which the vegetation map is to be read         {LAI_MAP}
1939LAI_FILE =  lai2D.nc
1940
1941# RENORM_LAI ([FLAG]) :  flag to force LAI renormelization      {LAI_MAP}
1942RENORM_LAI =  n
1943
1944# VEGETATION_FILE ([FILE]) :  Name of file from which the vegetation map is to be read  {}
1945VEGETATION_FILE =  PFTmap.nc
1946
1947# CNLEAF_FILE ([FILE]) :  Name of file from which the cn leaf ratio is to be read       {}
1948CNLEAF_FILE =  cnleaf_map.nc
1949
1950# CNLEAF_VAR ([VAR]) :  Name of the variable in the file from which the cn leaf ratio is to be read     {}
1951CNLEAF_VAR =  leaf_cn.nc
1952
1953# SOILCLASS_FILE ([FILE]) :  Name of file from which soil types are read        {NOT(IMPOSE_VEG)}
1954SOILCLASS_FILE =  soils_param.nc
1955
1956# SOIL_BULK_FILE ([FILE]) :  Name of file from which soil bulk should be read   {}
1957SOIL_BULK_FILE =  soil_bulk_and_ph.nc
1958
1959# SOIL_PH_FILE ([FILE]) :  Name of file from which soil ph should be read       {}
1960SOIL_PH_FILE =  soil_bulk_and_ph.nc
1961
1962# SLOPE_NOREINF ([-]) :  See slope_noreinf above        {}
1963SLOPE_NOREINF =  0.5
1964
1965# TOPOGRAPHY_FILE ([FILE]) :  Name of file from which the topography map is to be read  {}
1966TOPOGRAPHY_FILE =  cartepente2d_15min.nc
1967
1968# NINPUT File ([FILE]) :  Name of file from which the N-input map is to be read         {}
1969NINPUT File =  'Ninput_fied'.nc
1970
1971# NINPUT var ([FILE]) :  Name of the variable in the file from which the N-input map is to be read      {}
1972NINPUT var =  'Ninput_fied'
1973
1974# WOODHARVEST_FILE ([FILE]) :  Name of file from which the wood harvest will be read    {DO_WOOD_HARVEST}
1975WOODHARVEST_FILE =  woodharvest.nc
1976
1977# SOILALB_FILE ([FILE]) :  Name of file from which the bare soil albedo         {NOT(IMPOSE_AZE)}
1978SOILALB_FILE =  soils_param.nc
1979
1980# ALB_BG_FILE ([FILE]) :  Name of file from which the background albedo is read         {ALB_BG_MODIS}
1981ALB_BG_FILE =  alb_bg.nc
1982
1983# CDRAG_FROM_GCM ([FLAG]) :  Keep cdrag coefficient from gcm.   {OK_SECHIBA}
1984CDRAG_FROM_GCM =  y
1985
1986# N_FERTIL_FILE (- ) :  File name       {CHEMISTRY_BVOC and NOx_FERTILIZERS_USE}
1987N_FERTIL_FILE =  orchidee_fertilizer_1995.nc
1988
1989# N_FERTIL_FILE (-) :  File name        {CHEMISTRY_BVOC and NOx_FERTILIZERS_USE}
1990N_FERTIL_FILE =  orchidee_fertilizer_1995.nc
1991
1992# ENERBIL_TSURF (Kelvin [K]) :  Initial temperature if not found in restart     {OK_SECHIBA}
1993ENERBIL_TSURF =  280.
1994
1995# ENERBIL_EVAPOT () :  Initial Soil Potential Evaporation       {OK_SECHIBA       }
1996ENERBIL_EVAPOT =  0.0
1997
1998# BEDROCK_FLAG ([FLAG]) :  Flag to consider bedrock at deeper layers.   {}
1999BEDROCK_FLAG =  0
2000
2001# USE_SOILC_TEMPDIFF ([FLAG]) :  insolation effect of the organic top soil layer        {OK_SOIL_CARBON_DISCRETIZATION }
2002USE_SOILC_TEMPDIFF =  FALSE
2003
2004# USE_REFSOC ([FLAG]) :  Read a SOC map to perform the insolation effect        {USE_SOILC_TEMPDIFF }
2005USE_REFSOC =  TRUE
2006
2007# USE_SOILC_METHOD ([FLAG]) :  Flag to control the way to average thermal conductivity of mineral soil and organic soil         {OK_SOIL_CARBON_DISCRETIZATION}
2008USE_SOILC_METHOD =  1
2009
2010# SNOW_COND_METHOD ([1=original method, 2=method by Decharme et al 2016]) :  Flag to choose the way to calculate snow thermal conductivity      {OK_SOIL_CARBON_DISCRETIZATION}
2011SNOW_COND_METHOD =  1
2012
2013# THERMOSOIL_TPRO (Kelvin [K]) :  Initial soil temperature profile if not found in restart      {OK_SECHIBA}
2014THERMOSOIL_TPRO =  280.
2015
2016# SOIL_REFTEMP_FILE ([FILE]) :  File with climatological soil temperature       {READ_REFTEMP}
2017SOIL_REFTEMP_FILE =  reftemp.nc
2018
2019# SOIL_REFSOC_FILE ([FILE]) :  File with soil carbon stocks     {OK_SOIL_CARBON_DISCRETIZATION, USE_REFSOC, SOIL_CTEMPDIFF}
2020SOIL_REFSOC_FILE =  refSOC.nc
2021
2022# DO_PONDS ([FLAG]) :  Should we include ponds          {}
2023DO_PONDS =  n
2024
2025# FROZ_FRAC_CORR  ([-]) :  Coefficient for the frozen fraction correction       {OK_FREEZE}
2026FROZ_FRAC_CORR  =  1.0
2027
2028# MAX_FROZ_HYDRO ([-]) :  Coefficient for the frozen fraction correction        {OK_FREEZE}
2029MAX_FROZ_HYDRO =  1.0
2030
2031# SMTOT_CORR ([-]) :  Coefficient for the frozen fraction correction    {OK_FREEZE}
2032SMTOT_CORR =  2.0
2033
2034# DO_RSOIL ([FLAG]) :  Should we reduce soil evaporation with a soil resistance         {}
2035DO_RSOIL =  n
2036
2037# OK_DYNROOT ([FLAG]) :  Calculate dynamic root profile to optimize soil moisture usage         {}
2038OK_DYNROOT =  n
2039
2040# CWRR_N_VANGENUCHTEN ([-]) :  Van genuchten coefficient n      {}
2041CWRR_N_VANGENUCHTEN =  1.89, 1.56, 1.31
2042
2043# CWRR_A_VANGENUCHTEN ([1/mm]  ) :  Van genuchten coefficient a         {}
2044CWRR_A_VANGENUCHTEN =  0.0075, 0.0036, 0.0019
2045
2046# VWC_RESIDUAL ([m3/m3]  ) :  Residual soil water content       {}
2047VWC_RESIDUAL =  0.065, 0.078, 0.095
2048
2049# VWC_SAT ([m3/m3]  ) :  Saturated soil water content   {}
2050VWC_SAT =  0.41, 0.43, 0.41
2051
2052# CWRR_KS  ([mm/d]   ) :  Hydraulic conductivity Saturation     {}
2053CWRR_KS  =  1060.8, 249.6, 62.4
2054
2055# WETNESS_TRANSPIR_MAX ([-]    ) :  Soil moisture above which transpir is max   {}
2056WETNESS_TRANSPIR_MAX =  0.5, 0.5, 0.5
2057
2058# VWC_FC  ([m3/m3]   ) :  Volumetric water content field capacity       {}
2059VWC_FC  =  0.32, 0.32, 0.32
2060
2061# VWC_WP ([m3/m3]   ) :  Volumetric water content Wilting pt    {}
2062VWC_WP =  0.10, 0.10, 0.10 
2063
2064# VWC_MIN_FOR_WET_ALB ([m3/m3]  ) :  Vol. wat. cont. above which albedo is cst  {}
2065VWC_MIN_FOR_WET_ALB =  0.25, 0.25, 0.25
2066
2067# VWC_MAX_FOR_DRY_ALB ([m3/m3]   ) :  Vol. wat. cont. below which albedo is cst         {}
2068VWC_MAX_FOR_DRY_ALB =  0.1, 0.1, 0.1
2069
2070# HYDROL_MOISTURE_CONTENT ([m3/m3]) :  Soil moisture on each soil tile and levels       {}
2071HYDROL_MOISTURE_CONTENT =  0.3
2072
2073# US_INIT ([-]) :  US_NVM_NSTM_NSLM     {}
2074US_INIT =  0.0
2075
2076# ZWT_FORCE ([m]) :  Prescribed water depth, dimension nstm     {}
2077ZWT_FORCE =  -9999. -9999. -9999.
2078
2079# FREE_DRAIN_COEF ([-]) :  Coefficient for free drainage at bottom, dimension nstm      {}
2080FREE_DRAIN_COEF =  1.0 1.0 1.0
2081
2082# WATER_TO_INFILT ([mm]) :  Water to be infiltrated on top of the soil  {}
2083WATER_TO_INFILT =  0.0
2084
2085# EVAPNU_SOIL ([mm]) :  Bare soil evap on each soil if not found in restart     {}
2086EVAPNU_SOIL =  0.0
2087
2088# HYDROL_SNOW () :  Initial snow mass if not found in restart   {OK_SECHIBA}
2089HYDROL_SNOW =  0.0
2090
2091# HYDROL_SNOWAGE (***) :  Initial snow age if not found in restart      {OK_SECHIBA}
2092HYDROL_SNOWAGE =  0.0
2093
2094# HYDROL_SNOW_NOBIO ([mm]) :  Initial snow amount on ice, lakes, etc. if not found in restart   {OK_SECHIBA}
2095HYDROL_SNOW_NOBIO =  0.0
2096
2097# HYDROL_SNOW_NOBIO_AGE (***) :  Initial snow age on ice, lakes, etc. if not found in restart   {OK_SECHIBA}
2098HYDROL_SNOW_NOBIO_AGE =  0.0
2099
2100# HYDROL_QSV ([mm]) :  Initial water on canopy if not found in restart  {OK_SECHIBA}
2101HYDROL_QSV =  0.0
2102
2103# CWRR_NKS_N0  ([-]) :  fitted value for relation log((n-n0)/(n_ref-n0))        {}
2104CWRR_NKS_N0  =  0.0
2105
2106# CWRR_NKS_POWER ([-]) :  fitted value for relation log((n-n0)/(n_ref-n0))      {}
2107CWRR_NKS_POWER =  0.0
2108
2109# CWRR_AKS_A0  ([1/mm]) :  fitted value for relation log((a-a0)/(a_ref-a0))     {}
2110CWRR_AKS_A0  =  0.0
2111
2112# CWRR_AKS_POWER ([-]) :  fitted value for relation log((a-a0)/(a_ref-a0))      {}
2113CWRR_AKS_POWER =  0.0
2114
2115# KFACT_DECAY_RATE ([1/m]) :  Factor for Ks decay with depth    {}
2116KFACT_DECAY_RATE =  2.0
2117
2118# KFACT_STARTING_DEPTH ([m]) :  Depth for compacted value of Ks         {}
2119KFACT_STARTING_DEPTH =  0.3
2120
2121# KFACT_MAX ([-]) :  Maximum Factor for Ks increase due to vegetation   {}
2122KFACT_MAX =  10.0
2123
2124# DT_ROUTING  ([seconds]) :  Time step of the routing scheme    {RIVER_ROUTING}
2125DT_ROUTING  =  86400.
2126
2127# ROUTING_RIVERS ([-]) :  Number of rivers      {RIVER_ROUTING}
2128ROUTING_RIVERS =  50
2129
2130# DO_FLOODINFILT ([FLAG]) :  Should floodplains reinfiltrate into the soil      {RIVER_ROUTING}
2131DO_FLOODINFILT =  n
2132
2133# DO_SWAMPS ([FLAG]) :  Should we include swamp parameterization        {RIVER_ROUTING}
2134DO_SWAMPS =  n
2135
2136# DO_PONDS ([FLAG]) :  Should we include ponds          {RIVER_ROUTING}
2137DO_PONDS =  n
2138
2139# SLOW_TCST ([days]) :  Time constant for the slow reservoir    {RIVER_ROUTING }
2140SLOW_TCST =  25.0 
2141
2142# FAST_TCST ([days]) :  Time constant for the fast reservoir    {RIVER_ROUTING }
2143FAST_TCST =  3.0 
2144
2145# STREAM_TCST ([days]) :  Time constant for the stream reservoir        {RIVER_ROUTING}
2146STREAM_TCST =  0.24
2147
2148# FLOOD_TCST ([days]) :  Time constant for the flood reservoir          {RIVER_ROUTING}
2149FLOOD_TCST =  4.0
2150
2151# SWAMP_CST ([-]) :  Fraction of the river that flows back to swamps    {RIVER_ROUTING}
2152SWAMP_CST =  0.2
2153
2154# FLOOD_BETA ([-] ) :  Parameter to fix the shape of the floodplain     {RIVER_ROUTING}
2155FLOOD_BETA =  2.0
2156
2157# POND_BETAP ([-] ) :  Ratio of the basin surface intercepted by ponds and the maximum surface of ponds         {RIVER_ROUTING}
2158POND_BETAP =  0.5
2159
2160# FLOOD_CRI ([mm] ) :  Potential height for which all the basin is flooded      {DO_FLOODPLAINS or DO_PONDS}
2161FLOOD_CRI =  2000.
2162
2163# POND_CRI ([mm] ) :  Potential height for which all the basin is a pond        {DO_FLOODPLAINS or DO_PONDS}
2164POND_CRI =  2000.
2165
2166# MAX_LAKE_RESERVOIR ([kg/m2(routing area)] ) :  Maximum limit of water in lake_reservoir       {RIVER_ROUTING}
2167MAX_LAKE_RESERVOIR =  7000
2168
2169# RIVER_DESC ([FLAG]) :  Writes out a description of the rivers         {RIVER_ROUTING}
2170RIVER_DESC =  n
2171
2172# RIVER_DESC_FILE ([FILE]) :  Filename in which we write the description of the rivers. If suffix is ".nc" a netCDF file is created     {RIVER_DESC}
2173RIVER_DESC_FILE =  river_desc.nc
2174
2175# ROUTING_FILE ([FILE]) :  Name of file which contains the routing information  {RIVER_ROUTING}
2176ROUTING_FILE =  routing.nc
2177
2178# IRRIGATION_FILE ([FILE]) :  Name of file which contains the map of irrigated areas    {DO_IRRIGATION OR DO_FLOODPLAINS}
2179IRRIGATION_FILE =  floodplains.nc
2180
2181# EPS_CARBON ([%]   ) :  Allowed error on carbon stock  {SPINUP_ANALYTIC}
2182EPS_CARBON =  0.01
2183
2184# SPINUP_PERIOD ([years]   ) :  Period to calulcate equilibrium during spinup analytic  {SPINUP_ANALYTIC}
2185SPINUP_PERIOD =  -1
2186
2187# FORCESOIL_STEP_PER_YEAR ([days, months, year]) :  Number of time steps per year for carbon spinup.    {STOMATE_CFORCING_NAME and OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
2188FORCESOIL_STEP_PER_YEAR =  365 (366, ...)
2189
2190# FORCESOIL_NB_YEAR ([years]) :  Number of years saved for carbon spinup.       {STOMATE_CFORCING_NAME and OK_STOMATE}
2191FORCESOIL_NB_YEAR =  1
2192
2193# FROZEN_RESPIRATION_FUNC  ([1]) :  Method for soil decomposition function      {OK_SOIL_CARBON_DISCRETIZATION }
2194FROZEN_RESPIRATION_FUNC  =  1
2195
2196# STOMATE_DIAGPT ([-]) :  Index of grid point for online diagnostics    {OK_STOMATE}
2197STOMATE_DIAGPT =  1
2198
2199# XIOS_ORCHIDEE_OK ([FLAG]) :  Use XIOS for writing diagnostics file    {}
2200XIOS_ORCHIDEE_OK =  y 
2201
2202# XIOS_INTERPOLATION ([FLAG]) :  Actiave reading and intrepolation using XIOS   {XIOS_ORCHIDEE_OK}
2203XIOS_INTERPOLATION =  n
2204
2205# XIOS_REMAP_OUTPUT ([FLAG]) :  Actiave remaping of diagnostic output files to regular grid     {XIOS_ORCHIDEE_OK .AND. grid_type=unstructured}
2206XIOS_REMAP_OUTPUT =  True
2207
2208# DT_STOMATE ([seconds]) :  Time step of STOMATE and other slow processes       {OK_STOMATE}
2209DT_STOMATE =  86400.
2210
2211# organic_layer_thickness ([-]) :  The thickness of organic layer       {OK_SOIL_CARBON_DISCRETIZATION}
2212organic_layer_thickness =  0.0 
2213
2214# OK_METHANE ([flag]) :  Is Methanogenesis and -trophy taken into account?      {OK_SOIL_CARBON_DISCRETIZATION}
2215OK_METHANE =  n
2216
2217# HEAT_CO2_ACT ([J/Kg]) :  specific heat of soil organic matter oxidation for active carbon (J/kg carbon)       {OK_SOIL_CARBON_DISCRETIZATION}
2218HEAT_CO2_ACT =  40.0E6 
2219
2220# HEAT_CO2_SLO ([J/Kg]) :  specific heat of soil organic matter oxidation for slow      {OK_SOIL_CARBON_DISCRETIZATION}
2221HEAT_CO2_SLO =  30.0E6 
2222
2223# HEAT_CO2_PAS ([J/Kg]) :  specific heat of soil organic matter oxidation for   {OK_SOIL_CARBON_DISCRETIZATION}
2224HEAT_CO2_PAS =  10.0E6 
2225
2226# TAU_CH4_TROPH ([s]) :  time constant of methanetrophy         {OK_SOIL_CARBON_DISCRETIZATION}
2227TAU_CH4_TROPH =  432000 
2228
2229# TAU_CH4_GEN_RATIO ([-]) :  time constant of methanogenesis (ratio to that of oxic)    {OK_SOIL_CARBON_DISCRETIZATION}
2230TAU_CH4_GEN_RATIO =  9.0 
2231
2232# O2_SEUIL_MGEN ([g/m3]) :  oxygen concentration below which there is anoxy     {OK_SOIL_CARBON_DISCRETIZATION}
2233O2_SEUIL_MGEN =  3.0 
2234
2235# HEAT_CH4_GEN ([J/kgC]) :  specific heat of methanogenesis     {OK_SOIL_CARBON_DISCRETIZATION}
2236HEAT_CH4_GEN =  0 
2237
2238# HEAT_CH4_TROPH ([J/kgC]) :  specific heat of methanotrophy    {OK_SOIL_CARBON_DISCRETIZATION}
2239HEAT_CH4_TROPH =  0 
2240
2241# O2_LIMIT ([flag]) :  O2 limitation taken into account         {OK_SOIL_CARBON_DISCRETIZATION}
2242O2_LIMIT =  n
2243
2244# cryoturbate ([flag]) :  Do we allow for cyoturbation?         {OK_SOIL_CARBON_DISCRETIZATION}
2245cryoturbate =  y 
2246
2247# cryoturbation_diff_k_in ([m2/year]) :  diffusion constant for cryoturbation   {OK_SOIL_CARBON_DISCRETIZATION}
2248cryoturbation_diff_k_in =  0.001 
2249
2250# bioturbation_diff_k_in ([m2/year]) :  diffusion constant for bioturbation     {OK_SOIL_CARBON_DISCRETIZATION}
2251bioturbation_diff_k_in =  0.0
2252
2253# MG_useallCpools ([flag]) :  Do we allow all three C pools to feed methanogenesis?     {OK_SOIL_CARBON_DISCRETIZATION}
2254MG_useallCpools =  y 
2255
2256# max_shum_value ([-]) :  maximum saturation degree on the thermal axes         {OK_SOIL_CARBON_DISCRETIZATION}
2257max_shum_value =  1 
2258
2259# reset_yedoma_carbon ([flag]) :  Do we reset carbon concentrations for yedoma region?  {OK_SOIL_CARBON_DISCRETIZATION}
2260reset_yedoma_carbon =  n 
2261
2262# yedoma_map_filename ([]) :  The filename for yedoma map       {OK_SOIL_CARBON_DISCRETIZATION}
2263yedoma_map_filename =  yedoma_map.nc 
2264
2265# yedoma_depth ([m]) :  The depth for soil carbon in yedoma     {OK_SOIL_CARBON_DISCRETIZATION}
2266yedoma_depth =  20 
2267
2268# deepC_a_init ([]) :  Carbon concentration for active soil C pool in yedoma    {OK_SOIL_CARBON_DISCRETIZATION}
2269deepC_a_init =  1790.1   
2270
2271# deepC_s_init ([]) :  Carbon concentration for slow soil C pool in yedoma      {OK_SOIL_CARBON_DISCRETIZATION}
2272deepC_s_init =  14360.8
2273
2274# deepC_p_init ([]) :  Carbon concentration for passive soil C pool in yedoma   {OK_SOIL_CARBON_DISCRETIZATION}
2275deepC_p_init =  1436
2276
2277# newaltcalc ([flag]) :  calculate alt ?        {OK_SOIL_CARBON_DISCRETIZATION}
2278newaltcalc =  n
2279
2280# new_carbinput_intdepzlit ([flag]) :           {OK_SOIL_CARBON_DISCRETIZATION}
2281new_carbinput_intdepzlit =  n
2282
2283# correct_carboninput_vertprof ([flag]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2284correct_carboninput_vertprof =  n
2285
2286# use_new_cryoturbation ([flag]) :      {OK_SOIL_CARBON_DISCRETIZATION}
2287use_new_cryoturbation =  n
2288
2289# cryoturbation_method ([]) :           { OK_SOIL_CARBON_DISCRETIZATION }
2290cryoturbation_method =  1
2291
2292# max_cryoturb_alt ([]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2293max_cryoturb_alt =  1
2294
2295# min_cryoturb_alt ([]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2296min_cryoturb_alt =  1
2297
2298# reset_fixed_cryoturbation_depth ([flag]) :    {OK_SOIL_CARBON_DISCRETIZATION}
2299reset_fixed_cryoturbation_depth =  n
2300
2301# use_fixed_cryoturbation_depth ([flag]) :      {OK_SOIL_CARBON_DISCRETIZATION}
2302use_fixed_cryoturbation_depth =  n
2303
2304# bioturbation_depth (m) :  maximum bioturbation depth          {OK_SOIL_CARBON_DISCRETIZATION}
2305bioturbation_depth =  2
2306
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