source: branches/ORCHIDEE_3_CMIP6/ORCHIDEE/orchidee.default @ 8367

Last change on this file since 8367 was 8087, checked in by josefine.ghattas, 12 months ago

Added option PRINTSTANDOUT which sends all write statement to the standard output instead of opening a text file out_orchidee per running core. This option is set by default to true. This option should be used if problem with too many output files. If instead, to have one file out_orchidee_xxx per core, set this option to false in orchidee.def. This is also done on the trunk [7969].

File size: 97.8 KB
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1#
2#
3#  WARNING !!!
4#  DO NOT MODIFY THIS FILE.
5#  THIS FILE IS ONLY PROVIDING INFORMATION ABOUT DEFAULT PARAMETER SETTINGS IN ORCHIDEE.
6#
7#*******************************************************************************************
8#                    Namelist for ORCHIDEE
9#*******************************************************************************************
10#
11#  For more details, see : http://forge.ipsl.jussieu.fr/orchidee/wiki/Documentation/OrchideeParameters
12#
13#  Note : [m] : meters; [K] : Kelvin degrees; [C] : Celsius degrees
14#
15
16#*******************************************************************************************
17#          ORCHIDEE driver parameters (read in Off-line mode only)
18#*******************************************************************************************
19
20# LWDOWN_CONS ([FLAG]) :  Conserve longwave downwelling radiation in the forcing        {}
21LWDOWN_CONS =  n
22
23# SWDOWN_CONS ([FLAG]) :  Conserve shortwave downwelling radiation in the forcing       {}
24SWDOWN_CONS =  LWDOWN_CONS
25
26# FORCING_FILE ([FILE] ) :  Name of file containing the forcing data    {[-]}
27FORCING_FILE =  forcing_file.nc
28
29# DT_SECHIBA ([seconds]) :  Time-step of the SECHIBA component  {NOT(WEATHERGEN)}
30DT_SECHIBA =  1800.
31
32# RESTART_FILEIN ([FILE]) :  Name of restart to READ for initial conditions     {[-]}
33RESTART_FILEIN =  NONE
34
35# RESTART_FILEOUT ([FILE]) :  Name of restart files to be created by the driver         {[-]}
36RESTART_FILEOUT =  driver_rest_out.nc
37
38# DRIVER_reset_time ([FLAG]) :  Overwrite time values from the driver restart file      {[-]}
39DRIVER_reset_time =  n
40
41# TIME_SKIP ([seconds, days, months, years]) :  Time in the forcing file at which the model is started.         {[-]}
42TIME_SKIP =  0
43
44# TIME_LENGTH ([seconds, days, months, years]) :  Length of the integration in time.    {[-]}
45TIME_LENGTH =  Full length of the forcing file 
46
47# RELAXATION ([FLAG]) :  method of forcing      {[-]}
48RELAXATION =  n
49
50# RELAX_A ([days?]) :  Time constant of the relaxation layer    {RELAXATION}
51RELAX_A =  1.0
52
53# SPRED_PREC ([-]) :  Spread the precipitation.         {[-]}
54SPRED_PREC =  Half of the forcing time step or uniform, depending on dt_force and dt_sechiba
55
56# ATM_CO2 ([ppm]) :  Value to precribe atmosoheric CO2  {[FORCE_CO2_VEG=y or Offline mode]}
57ATM_CO2 =  350.
58
59# CO2_varying ([y/n]) :  A flag to specify if CO2 level will vary within the simulation         {[FORCE_CO2_VEG=y or Offline mode]}
60CO2_varying =  .FALSE.
61
62# CO2_inc ([-]) :  Relative yearly increase of the CO2 level    {[FORCE_CO2_VEG=y or Offline mode]}
63CO2_inc =  1.
64
65# ALLOW_WEATHERGEN ([FLAG]) :  Allow weather generator to create data   {[-]}
66ALLOW_WEATHERGEN =  n
67
68# DT_WEATHGEN ([seconds]) :  Calling frequency of weather generator     {ALLOW_WEATHERGEN}
69DT_WEATHGEN =  1800.
70
71# LIMIT_WEST ([Degrees] ) :  Western limit of region    {[-]}
72LIMIT_WEST =  -180.
73
74# LIMIT_EAST ([Degrees] ) :  Eastern limit of region    {[-]}
75LIMIT_EAST =  180.
76
77# LIMIT_NORTH ([Degrees]) :  Northern limit of region   {[-]}
78LIMIT_NORTH =  90.
79
80# LIMIT_SOUTH ([Degrees]) :  Southern limit of region   {[-]}
81LIMIT_SOUTH =  -90.
82
83# MERID_RES ([Degrees]) :  North-South Resolution       {ALLOW_WEATHERGEN}
84MERID_RES =  2.
85
86# ZONAL_RES ([Degrees] ) :  East-West Resolution        {ALLOW_WEATHERGEN}
87ZONAL_RES =  2.
88
89# HEIGHT_LEV1 ([m]) :  Height at which T and Q are given        {offline mode}
90HEIGHT_LEV1 =  2.0
91
92# HEIGHT_LEVW ([m]) :  Height at which the wind is given        {offline mode}
93HEIGHT_LEVW =  10.0
94
95# NBUFF (-) :  Number of time steps of data to buffer between each reading of the forcing file  {OFF_LINE}
96NBUFF =  1
97
98# IPPREC ([-] ) :  Use prescribed values        {ALLOW_WEATHERGEN}
99IPPREC =  0
100
101# WEATHGEN_PRECIP_EXACT ([FLAG]) :  Exact monthly precipitation         {ALLOW_WEATHERGEN}
102WEATHGEN_PRECIP_EXACT =  n
103
104# DUMP_WEATHER ([FLAG]) :  Write weather from generator into a forcing file     {ALLOW_WEATHERGEN  }
105DUMP_WEATHER =  n
106
107# DUMP_WEATHER_FILE ([FILE]) :  Name of the file that contains the weather from generator       {DUMP_WEATHER}
108DUMP_WEATHER_FILE =  weather_dump.nc
109
110# DUMP_WEATHER_GATHERED ([FLAG]) :  Dump weather data on gathered grid  {DUMP_WEATHER}
111DUMP_WEATHER_GATHERED =  y
112
113# HEIGHT_LEV1_DUMP ([m]) :      {DUMP_WEATHER}
114HEIGHT_LEV1_DUMP =  10.
115
116#*******************************************************************************************
117#          ORCHIDEE parameters 
118#*******************************************************************************************
119
120# NC_RESTART_COMPRESSION  ([FLAG]) :  Restart netcdf outputs file are written in compression mode       {}
121NC_RESTART_COMPRESSION  =  n
122
123# SOILTYPE_CLASSIF ([-]) :  Type of classification used for the map of soil types       {!IMPOSE_VEG}
124SOILTYPE_CLASSIF =  zobler
125
126# RIVER_ROUTING ([FLAG]) :  Decides if we route the water or not        {OK_SECHIBA}
127RIVER_ROUTING =  y
128
129# DO_IRRIGATION ([FLAG]) :  Should we compute an irrigation flux        {RIVER_ROUTING }
130DO_IRRIGATION =  n
131
132# DO_FLOODPLAINS ([FLAG]  ) :  Should we include floodplains    {RIVER_ROUTING }
133DO_FLOODPLAINS =  n
134
135# OK_SOIL_CARBON_DISCRETIZATION ([FLAG]) :  Activate soil carbon vertical discretization        {OK_STOMATE}
136OK_SOIL_CARBON_DISCRETIZATION =  FALSE
137
138# STOMATE_OK_STOMATE ([FLAG]) :  Activate STOMATE?      {OK_SECHIBA}
139STOMATE_OK_STOMATE =  y
140
141# DO_WOOD_HARVEST ([FLAG]) :  Activate Wood Harvest ?   {OK_STOMATE}
142DO_WOOD_HARVEST =  y
143
144# STOMATE_OK_NCYCLE  ([FLAG] ) :  Activate dynamic N cycle      {OK_STOMATE }
145STOMATE_OK_NCYCLE  =  y 
146
147# STOMATE_IMPOSE_CN ([FLAG] ) :  Impose the CN ratio of leaves          {OK_STOMATE }
148STOMATE_IMPOSE_CN =  n 
149
150# RESET_IMPOSE_CN ([FLAG] ) :  Reset the CN ratio of leaves     {OK_STOMATE }
151RESET_IMPOSE_CN =  n 
152
153# STOMATE_READ_CN ([FLAG] ) :  Read the CN ratio of leaves      {OK_STOMATE }
154STOMATE_READ_CN =  n 
155
156# STOMATE_OK_DGVM ([FLAG]) :  Activate DGVM?    {OK_STOMATE}
157STOMATE_OK_DGVM =  n
158
159# CHEMISTRY_BVOC ([FLAG]) :  Activate calculations for BVOC     {OK_SECHIBA}
160CHEMISTRY_BVOC =  n
161
162# CHEMISTRY_LEAFAGE ([FLAG]) :  Activate LEAFAGE?       {CHEMISTRY_BVOC}
163CHEMISTRY_LEAFAGE =  n
164
165# CANOPY_EXTINCTION  ([FLAG]) :  Use canopy radiative transfer model?   {CHEMISTRY_BVOC }
166CANOPY_EXTINCTION  =  n
167
168# CANOPY_MULTILAYER ([FLAG]) :  Use canopy radiative transfer model with multi-layers   {CANOPY_EXTINCTION }
169CANOPY_MULTILAYER =  n
170
171# NOx_RAIN_PULSE ([FLAG]) :  Calculate NOx emissions with pulse?        {CHEMISTRY_BVOC }
172NOx_RAIN_PULSE =  n
173
174# NOx_BBG_FERTIL ([FLAG]) :  Calculate NOx emissions with bbg fertilizing effect?       {CHEMISTRY_BVOC }
175NOx_BBG_FERTIL =  n
176
177# NOx_FERTILIZERS_USE ([FLAG] ) :  Calculate NOx emissions with fertilizers use?        {CHEMISTRY_BVOC }
178NOx_FERTILIZERS_USE =  n
179
180# NVM ([-]) :  number of PFTs           {OK_SECHIBA or OK_STOMATE}
181NVM =  13
182
183# IMPOSE_PARAM ([FLAG]) :  Do you impose the values of the parameters?  {OK_SECHIBA or OK_STOMATE}
184IMPOSE_PARAM =  y
185
186# PRINTSTANDOUT ([FLAG]) :  Print to standard output    {}
187PRINTSTANDOUT =  TRUE
188
189# DEPTH_MAX_T (m) :  Maximum depth of the soil thermodynamics   {}
190DEPTH_MAX_T =  90.0
191
192# DEPTH_MAX_H (m) :  Maximum depth of soil moisture     {}
193DEPTH_MAX_H =  2.0
194
195# DEPTH_TOPTHICK (m) :  Thickness of upper most Layer   {}
196DEPTH_TOPTHICK =  9.77517107e-04
197
198# DEPTH_CSTTHICK (m) :  Depth at which constant layer thickness start   {}
199DEPTH_CSTTHICK =  DEPTH_MAX_H 
200
201# REFINEBOTTOM (-) :  Depth at which the hydrology layers will be refined towards the bottom.   {}
202REFINEBOTTOM =  .FALSE.
203
204# DEPTH_GEOM (m) :  Depth at which we resume geometrical increases for temperature      {}
205DEPTH_GEOM =  DEPTH_MAX_H 
206
207# RATIO_GEOM_BELOW (-) :  Ratio of the geometrical series defining the thickness below DEPTH_GEOM       {}
208RATIO_GEOM_BELOW =  2
209
210# ALMA_OUTPUT ([FLAG]) :  Should the output follow the ALMA convention  {OK_SECHIBA}
211ALMA_OUTPUT =  n
212
213# OUTPUT_FILE ([FILE]) :  Name of file in which the output is going to be written       {OK_SECHIBA}
214OUTPUT_FILE =  sechiba_history.nc
215
216# WRITE_STEP ([seconds]) :  Frequency in seconds for sechiba_history.nc file with IOIPSL        {OK_SECHIBA, NOT XIOS_ORCHIDEE_OK}
217WRITE_STEP =  86400.
218
219# SECHIBA_HISTLEVEL ([-]) :  SECHIBA history output level (0..10)       {OK_SECHIBA and HF}
220SECHIBA_HISTLEVEL =  5
221
222# SECHIBA_HISTFILE2 ([FLAG]) :  Flag to switch on histfile 2 for SECHIBA (hi-frequency ?)       {OK_SECHIBA}
223SECHIBA_HISTFILE2 =  n
224
225# WRITE_STEP2 ([seconds]) :  Frequency in seconds at which to WRITE output      {SECHIBA_HISTFILE2}
226WRITE_STEP2 =  1800.0
227
228# SECHIBA_OUTPUT_FILE2 ([FILE]) :  Name of file in which the output number 2 is going to be written     {SECHIBA_HISTFILE2}
229SECHIBA_OUTPUT_FILE2 =  sechiba_out_2.nc
230
231# SECHIBA_HISTLEVEL2 ([-] ) :  SECHIBA history 2 output level (0..10)   {SECHIBA_HISTFILE2}
232SECHIBA_HISTLEVEL2 =  1
233
234# STOMATE_OUTPUT_FILE ([FILE]) :  Name of file in which STOMATE's output is going to be written         {OK_STOMATE}
235STOMATE_OUTPUT_FILE =  stomate_history.nc
236
237# STOMATE_HIST_DT ([days]) :  STOMATE history time step         {OK_STOMATE}
238STOMATE_HIST_DT =  10.
239
240# STOMATE_IPCC_OUTPUT_FILE ([FILE]) :  Name of file in which STOMATE's output is going to be written    {OK_STOMATE}
241STOMATE_IPCC_OUTPUT_FILE =  stomate_ipcc_history.nc
242
243# STOMATE_IPCC_HIST_DT ([days]) :  STOMATE IPCC history time step       {OK_STOMATE}
244STOMATE_IPCC_HIST_DT =  0.
245
246# OK_HISTSYNC ([FLAG]) :  Syncronize and write IOIPSL output files at each time step    {}
247OK_HISTSYNC =  FALSE
248
249# STOMATE_HISTLEVEL ([-]) :  STOMATE history output level (0..10)       {OK_STOMATE}
250STOMATE_HISTLEVEL =  10
251
252# SECHIBA_restart_in ([FILE]) :  Name of restart to READ for initial conditions         {OK_SECHIBA }
253SECHIBA_restart_in =  NONE
254
255# SECHIBA_rest_out ([FILE]) :  Name of restart files to be created by SECHIBA   {OK_SECHIBA}
256SECHIBA_rest_out =  sechiba_rest_out.nc
257
258# STOMATE_RESTART_FILEIN ([FILE]) :  Name of restart to READ for initial conditions of STOMATE  {STOMATE_OK_STOMATE}
259STOMATE_RESTART_FILEIN =  NONE
260
261# STOMATE_RESTART_FILEOUT ([FILE]) :  Name of restart files to be created by STOMATE    {STOMATE_OK_STOMATE}
262STOMATE_RESTART_FILEOUT =  stomate_rest_out.nc
263
264# FORCE_CO2_VEG ([FLAG]) :  Flag to force the value of atmospheric CO2 for vegetation.  {Only in coupled mode}
265FORCE_CO2_VEG =  FALSE
266
267# TAU_OUTFLOW ([days]) :  Number of days over which the coastal- and riverflow will be distributed      {Only in coupled mode}
268TAU_OUTFLOW =  0
269
270# ECCENTRICITY ([-]) :  Use prescribed values   {ALLOW_WEATHERGEN}
271ECCENTRICITY =  0.016724
272
273# PERIHELIE ([-]) :  Use prescribed values      {ALLOW_WEATHERGEN}
274PERIHELIE =  102.04
275
276# OBLIQUITY ([Degrees]) :  Use prescribed values        {ALLOW_WEATHERGEN}
277OBLIQUITY =  23.446
278
279# PFT_TO_MTC ([-]) :  correspondance array linking a PFT to MTC         {OK_SECHIBA or OK_STOMATE}
280PFT_TO_MTC =  1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
281
282# PFT_NAME ([-]) :  Name of a PFT       {OK_SECHIBA or OK_STOMATE}
283PFT_NAME =  bare ground, tropical broad-leaved evergreen, tropical broad-leaved raingreen, temperate needleleaf evergreen, temperate broad-leaved evergreen, temperate broad-leaved summergreen,  boreal needleleaf evergreen, boreal broad-leaved summergreen, boreal needleleaf summergreen,  C3 grass, C4 grass, C3 agriculture, C4 agriculture 
284
285# LEAF_TAB ([-] ) :  leaf type : 1      {OK_STOMATE}
286LEAF_TAB =  4, 1, 1, 2, 1, 1, 2, 1, 2, 3, 3, 3, 3 
287
288# PHENO_MODEL ([-] ) :  which phenology model is used? (tabulated)      {OK_STOMATE}
289PHENO_MODEL =  none, none, moi, none, none, ncdgdd, none, ncdgdd, ngd, moigdd, moigdd, moigdd, moigdd
290
291# SECHIBA_LAI ([m^2/m^2]) :  laimax for maximum lai(see also type of lai interpolation)         {OK_SECHIBA or IMPOSE_VEG}
292SECHIBA_LAI =  0., 8., 8., 4., 4.5, 4.5, 4., 4.5, 4., 2., 2., 2., 2.
293
294# LLAIMIN ([m^2/m^2]) :  laimin for minimum lai(see also type of lai interpolation)     {OK_SECHIBA or IMPOSE_VEG}
295LLAIMIN =  0., 8., 0., 4., 4.5, 0., 4., 0., 0., 0., 0., 0., 0.
296
297# SLOWPROC_HEIGHT ([m] ) :  prescribed height of vegetation     {OK_SECHIBA}
298SLOWPROC_HEIGHT =  0., 30., 30., 20., 20., 20., 15., 15., 15., .5, .6, 1., 1.
299
300# Z0_OVER_HEIGHT ([-] ) :  factor to calculate roughness height from height of canopy   {OK_SECHIBA}
301Z0_OVER_HEIGHT =  0., 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625, 0.0625
302
303# RATIO_Z0M_Z0H ([-]) :  Ratio between z0m and z0h      {OK_SECHIBA}
304RATIO_Z0M_Z0H =  1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0, 1.0 
305
306# TYPE_OF_LAI ([-]) :  Type of behaviour of the LAI evolution algorithm         {OK_SECHIBA}
307TYPE_OF_LAI =  inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter, inter
308
309# NATURAL ([BOOLEAN]) :  natural?       {OK_SECHIBA, OK_STOMATE}
310NATURAL =  y, y, y, y, y, y, y, y, y, y, y, n, n 
311
312# IS_C4 ([BOOLEAN]) :  flag for C4 vegetation types     {OK_SECHIBA or OK_STOMATE}
313IS_C4 =  n, n, n, n, n, n, n, n, n, n, n, y, n, y
314
315# VCMAX_FIX ([micromol/m^2/s] ) :  values used for vcmax when STOMATE is not activated  {OK_SECHIBA and NOT(OK_STOMATE)}
316VCMAX_FIX =  0., 40., 50., 30., 35., 40.,30., 40., 35., 60., 60., 70., 70.
317
318# DOWNREG_CO2 ([-]) :  coefficient for CO2 downregulation (unitless)    {}
319DOWNREG_CO2 =  0., 0.38, 0.38, 0.28, 0.28, 0.28, 0.22, 0.22, 0.22, 0.26, 0.26, 0.26, 0.26
320
321# E_KmC ([J mol-1]) :  Energy of activation for KmC     {}
322E_KmC =  -9999.,  79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430., 79430.
323
324# E_KmO ([J mol-1]) :  Energy of activation for KmO     {}
325E_KmO =  -9999., 36380.,  36380.,  36380.,  36380.,  36380., 36380., 36380., 36380., 36380., 36380., 36380., 36380.
326
327# E_Sco ([J mol-1]) :  Energy of activation for Sco     {}
328E_Sco =  -9999., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460., -24460.
329
330# E_gamma_star ([J mol-1]) :  Energy of activation for gamma_star       {}
331E_gamma_star =  -9999., 37830.,  37830.,  37830.,  37830.,  37830., 37830., 37830., 37830., 37830., 37830., 37830., 37830.
332
333# E_Vcmax ([J mol-1]) :  Energy of activation for Vcmax         {}
334E_Vcmax =  -9999., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 71513., 67300., 71513., 67300.
335
336# E_Jmax ([J mol-1]) :  Energy of activation for Jmax   {}
337E_Jmax =  -9999., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 49884., 77900., 49884., 77900. 
338
339# aSV ([J K-1 mol-1]) :  a coefficient of the linear regression (a+bT) defining the Entropy term for Vcmax      {}
340aSV =  -9999., 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 668.39, 641.64, 668.39, 641.64 
341
342# bSV ([J K-1 mol-1 °C-1]) :  b coefficient of the linear regression (a+bT) defining the Entropy term for Vcmax        {}
343bSV =  -9999., -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, -1.07, 0., -1.07, 0. 
344
345# TPHOTO_MIN ([-]) :  minimum photosynthesis temperature (deg C)        {OK_STOMATE}
346TPHOTO_MIN =  -9999.,  -4., -4., -4., -4.,-4.,-4., -4., -4., -4., -4., -4., -4.
347
348# TPHOTO_MAX ([-]) :  maximum photosynthesis temperature (deg C)        {OK_STOMATE}
349TPHOTO_MAX =  -9999., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55., 55.
350
351# aSJ ([J K-1 mol-1]) :  a coefficient of the linear regression (a+bT) defining the Entropy term for Jmax       {}
352aSJ =  -9999., 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 659.70, 630., 659.70, 630. 
353
354# bSJ ([J K-1 mol-1 °C-1]) :  b coefficient of the linear regression (a+bT) defining the Entropy term for Jmax         {}
355bSJ =  -9999., -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, -0.75, 0., -0.75, 0. 
356
357# D_Vcmax ([J mol-1]) :  Energy of deactivation for Vcmax       {}
358D_Vcmax =  -9999., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 192000., 200000., 192000.
359
360# D_Jmax ([J mol-1]) :  Energy of deactivation for Jmax         {}
361D_Jmax =  -9999., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 200000., 192000., 200000., 192000.
362
363# E_gm  ([J mol-1] ) :  Energy of activation for gm     { }
364E_gm  =  -9999., 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., 49600., -9999., 49600., -9999. 
365
366# S_gm  ([J K-1 mol-1] ) :  Entropy term for gm         { }
367S_gm  =  -9999., 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., 1400., -9999., 1400., -9999. 
368
369# D_gm  ([J mol-1] ) :  Energy of deactivation for gm   { }
370D_gm  =  -9999., 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., 437400., -9999., 437400., -9999. 
371
372# E_Rd ([J mol-1]) :  Energy of activation for Rd       {}
373E_Rd =  -9999., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390., 46390.
374
375# VCMAX25 ([micromol/m^2/s]) :  Maximum rate of Rubisco activity-limited carboxylation at 25°C         {OK_STOMATE}
376VCMAX25 =  -9999., 45.0, 45.0, 35.0, 40.0, 50.0, 45.0, 35.0, 35.0, 50.0, 50.0, 60.0, 60.0
377
378# ARJV ([mu mol e- (mu mol CO2)-1]) :  a coefficient of the linear regression (a+bT) defining the Jmax25/Vcmax25 ratio          {OK_STOMATE}
379ARJV =  -9999., 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 2.59, 1.715, 2.59, 1.715
380
381# BRJV ([(mu mol e- (mu mol CO2)-1) (°C)-1]) :  b coefficient of the linear regression (a+bT) defining the Jmax25/Vcmax25 ratio        {OK_STOMATE}
382BRJV =  -9999., -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, -0.035, 0., -0.035, 0.
383
384# KmC25 ([ubar]) :  Michaelis–Menten constant of Rubisco for CO2 at 25°C     {}
385KmC25 =  -9999., 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 404.9, 650., 404.9, 650.
386
387# KmO25 ([ubar]) :  Michaelis–Menten constant of Rubisco for O2 at 25°C      {}
388KmO25 =  -9999., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 278400., 450000., 278400., 450000.
389
390# Sco25 ([bar bar-1]) :  Relative CO2 /O2 specificity factor for Rubisco at 25°C     {}
391Sco25 =  -9999., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2800., 2590., 2800., 2590.
392
393# gm25  ([mol m-2 s-1 bar-1] ) :  Mesophyll diffusion conductance at 25°C        { }
394gm25  =  -9999., 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, 0.4, -9999., 0.4, -9999. 
395
396# gamma_star25 ([ubar]) :  Ci-based CO2 compensation point in the absence of Rd at 25°C (ubar)         {}
397gamma_star25 =  -9999., 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75, 42.75
398
399# a1 ([-]) :  Empirical factor involved in the calculation of fvpd      {}
400a1 =  -9999., 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.85, 0.72, 0.85, 0.72
401
402# b1 ([-]) :  Empirical factor involved in the calculation of fvpd      {}
403b1 =  -9999., 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.14, 0.20, 0.14, 0.20
404
405# g0 ([mol m−2 s−1 bar−1]) :  Residual stomatal conductance when irradiance approaches zero       {}
406g0 =  -9999., 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.00625, 0.01875, 0.00625, 0.01875 
407
408# h_protons ([mol mol-1]) :  Number of protons required to produce one ATP      {}
409h_protons =  -9999., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4., 4. 
410
411# fpsir ([-]) :  Fraction of PSII e− transport rate partitioned to the C4 cycle       {}
412fpsir =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.4, -9999., 0.4 
413
414# fQ ([-]) :  Fraction of electrons at reduced plastoquinone that follow the Q-cycle    {}
415fQ =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 1., -9999., 1.
416
417# fpseudo ([-]) :  Fraction of electrons at PSI that follow pseudocyclic transport      {}
418fpseudo =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.1, -9999., 0.1
419
420# kp ([mol m−2 s−1 bar−1]) :  Initial carboxylation efficiency of the PEP carboxylase     {}
421kp =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.7, -9999., 0.7
422
423# alpha ([-]) :  Fraction of PSII activity in the bundle sheath         {}
424alpha =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.1, -9999., 0.1
425
426# gbs ([mol m−2 s−1 bar−1]) :  Bundle-sheath conductance  {}
427gbs =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.003, -9999., 0.003
428
429# theta ([−]) :  Convexity factor for response of J to irradiance     {}
430theta =  -9999., 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7, 0.7
431
432# alpha_LL ([mol e− (mol photon)−1]) :  Conversion efficiency of absorbed light into J at strictly limiting light   {}
433alpha_LL =  -9999., 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372, 0.372
434
435# STRESS_VCMAX ([-]) :  Stress on vcmax         {OK_SECHIBA or OK_STOMATE}
436STRESS_VCMAX =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
437
438# STRESS_GS ([-]) :  Stress on gs       {OK_SECHIBA or OK_STOMATE}
439STRESS_GS =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
440
441# STRESS_GM ([-]) :  Stress on gm       {OK_SECHIBA or OK_STOMATE}
442STRESS_GM =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
443
444# EXT_COEFF ([-]) :  extinction coefficient of the Monsi&Seaki relationship (1953)      {OK_SECHIBA or OK_STOMATE}
445EXT_COEFF =  .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5
446
447# EXT_COEFF_VEGETFRAC ([-]) :  extinction coefficient used for the calculation of the bare soil fraction        {OK_SECHIBA or OK_STOMATE}
448EXT_COEFF_VEGETFRAC =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
449
450# HYDROL_HUMCSTE ([m]) :  Root profile  {OK_SECHIBA}
451HYDROL_HUMCSTE =  humcste_ref2m or humcste_ref4m depending on zmaxh
452
453# PREF_SOIL_VEG ([-]        ) :  The soil tile number for each vegetation       {OK_SECHIBA or OK_STOMATE}
454PREF_SOIL_VEG =  1, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3
455
456# RSTRUCT_CONST ([s/m]) :  Structural resistance        {OK_SECHIBA}
457RSTRUCT_CONST =  0.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0, 25.0,  2.5,  2.0,  2.0,  2.0
458
459# KZERO ([kg/m^2/s]) :  A vegetation dependent constant used in the calculation of the surface resistance.      {OK_SECHIBA}
460KZERO =  0.0, 12.E-5, 12.E-5, 12.e-5, 12.e-5, 25.e-5, 12.e-5,25.e-5, 25.e-5, 30.e-5, 30.e-5, 30.e-5, 30.e-5 
461
462# RVEG_PFT ([-]) :  Artificial parameter to increase or decrease canopy resistance.     {OK_SECHIBA}
463RVEG_PFT =  1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.
464
465# WMAX_VEG ([kg/m^3]) :  Maximum field capacity for each of the vegetations (Temporary): max quantity of water  {OK_SECHIBA}
466WMAX_VEG =  150., 150., 150., 150., 150., 150., 150.,150., 150., 150., 150., 150., 150.
467
468# PERCENT_THROUGHFALL_PFT ([%]) :  Percent by PFT of precip that is not intercepted by the canopy. Default value depend on run mode.    {OK_SECHIBA}
469PERCENT_THROUGHFALL_PFT =  Case offline [0. 0. 0....] else [30. 30. 30.....]
470
471# SNOWA_AGED_VIS ([-]) :  Minimum snow albedo value for each vegetation type after aging (dirty old snow), visible albedo       {OK_SECHIBA}
472SNOWA_AGED_VIS =  0.74, 0.0, 0.0, 0.08, 0.24, 0.07, 0.18, 0.18, 0.33, 0.57, 0.57, 0.57, 0.57
473
474# SNOWA_AGED_NIR ([-]) :  Minimum snow albedo value for each vegetation type after aging (dirty old snow), near infrared albedo         {OK_SECHIBA}
475SNOWA_AGED_NIR =  0.50, 0.0, 0.0, 0.10, 0.37, 0.08, 0.16, 0.17, 0.27, 0.44, 0.44, 0.44, 0.44   
476
477# SNOWA_DEC_VIS ([-]) :  Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, visible albedo    {OK_SECHIBA}
478SNOWA_DEC_VIS =  0.21, 0.0, 0.0, 0.14, 0.08, 0.17, 0.05, 0.06, 0.09, 0.15, 0.15, 0.15, 0.15 
479
480# SNOWA_DEC_NIR ([-]) :  Decay rate of snow albedo value for each vegetation type as it will be used in condveg_snow, near infrared albedo      {OK_SECHIBA}
481SNOWA_DEC_NIR =  0.13, 0.0, 0.0, 0.10, 0.10, 0.16, 0.04, 0.07, 0.08, 0.12, 0.12, 0.12, 0.12
482
483# ALB_LEAF_VIS ([-]) :  leaf albedo of vegetation type, visible albedo  {OK_SECHIBA}
484ALB_LEAF_VIS =  0.00, 0.04, 0.04, 0.04, 0.04, 0.03, 0.03, 0.03, 0.03, 0.06, 0.06, 0.06, 0.06
485
486# ALB_LEAF_NIR ([-]) :  leaf albedo of vegetation type, near infrared albedo    {OK_SECHIBA}
487ALB_LEAF_NIR =  0.00, 0.23, 0.18, 0.18, 0.20, 0.24, 0.15, 0.26, 0.20, 0.24, 0.27, 0.28, 0.26
488
489# ISO_ACTIVITY ([-]) :  Biogenic activity for each age class : isoprene         {CHEMISTRY_BVOC}
490ISO_ACTIVITY =  0.5, 1.5, 1.5, 0.5
491
492# METHANOL_ACTIVITY ([-]) :  Isoprene emission factor for each age class : methanol     {CHEMISTRY_BVOC}
493METHANOL_ACTIVITY =  1., 1., 0.5, 0.5
494
495# EM_FACTOR_ISOPRENE ([ugC/g/h] ) :  Isoprene emission factor   {CHEMISTRY_BVOC}
496EM_FACTOR_ISOPRENE =  0., 24., 24., 8., 16., 45., 8., 18., 0.5, 12., 18., 5., 5.
497
498# EM_FACTOR_MONOTERPENE ([ugC/g/h] ) :  Monoterpene emission factor     {CHEMISTRY_BVOC }
499EM_FACTOR_MONOTERPENE =  0., 2.0, 2.0, 1.8, 1.4, 1.6, 1.8, 1.4, 1.8, 0.8, 0.8,  0.22, 0.22
500
501# C_LDF_MONO  ([]) :  Monoterpenes fraction dependancy to light         {CHEMISTRY_BVOC}
502C_LDF_MONO  =  0.6
503
504# C_LDF_SESQ  ([]) :  Sesquiterpenes fraction dependancy to light       {CHEMISTRY_BVOC}
505C_LDF_SESQ  =  0.5
506
507# C_LDF_METH  ([]) :  Methanol fraction dependancy to light     {CHEMISTRY_BVOC}
508C_LDF_METH  =  0.8
509
510# C_LDF_ACET  ([]) :  Acetone fraction dependancy to light      {CHEMISTRY_BVOC}
511C_LDF_ACET  =  0.2
512
513# EM_FACTOR_APINENE  ([ugC/g/h] ) :  Alfa pinene  emission factor       {CHEMISTRY_BVOC }
514EM_FACTOR_APINENE  =  0., 1.35, 1.35, 0.85, 0.95, 0.75, 0.85, 0.60, 1.98, 0.30, 0.30, 0.09, 0.09
515
516# EM_FACTOR_BPINENE ([ugC/g/h] ) :  Beta pinene  emission factor        {CHEMISTRY_BVOC }
517EM_FACTOR_BPINENE =  0., 0.30, 0.30, 0.35, 0.25, 0.20, 0.35, 0.12, 0.45, 0.16, 0.12, 0.05, 0.05
518
519# EM_FACTOR_LIMONENE ([ugC/g/h] ) :  Limonene  emission factor  {CHEMISTRY_BVOC}
520EM_FACTOR_LIMONENE =  0., 0.25, 0.25, 0.20, 0.25, 0.14, 0.20, 0.135, 0.11, 0.19, 0.42, 0.03, 0.03
521
522# EM_FACTOR_MYRCENE ([ugC/g/h] ) :  Myrcene  emission factor    {CHEMISTRY_BVOC}
523EM_FACTOR_MYRCENE =  0., 0.20, 0.20, 0.12, 0.11, 0.065, 0.12, 0.036, 0.075, 0.08,  0.085, 0.015, 0.015
524
525# EM_FACTOR_SABINENE ([ugC/g/h] ) :  Sabinene  emission factor  {CHEMISTRY_BVOC}
526EM_FACTOR_SABINENE =  0., 0.20, 0.20, 0.12, 0.17, 0.70, 0.12, 0.50, 0.09, 0.085, 0.075, 0.02, 0.02
527
528# EM_FACTOR_CAMPHENE  ([ugC/g/h] ) :  Camphene  emission factor         {CHEMISTRY_BVOC}
529EM_FACTOR_CAMPHENE  =  0., 0.15, 0.15, 0.10, 0.10, 0.01, 0.10, 0.01, 0.07, 0.07, 0.08, 0.01, 0.01
530
531# EM_FACTOR_3CARENE  ([ugC/g/h] ) :  3-Carene  emission factor  {CHEMISTRY_BVOC}
532EM_FACTOR_3CARENE  =  0., 0.13, 0.13, 0.42, 0.02, 0.055, 0.42,0.025, 0.125, 0.085, 0.085, 0.065, 0.065
533
534# EM_FACTOR_TBOCIMENE ([ugC/g/h] ) :  T-beta-ocimene  emission factor   {CHEMISTRY_BVOC}
535EM_FACTOR_TBOCIMENE =  0., 0.25, 0.25, 0.13, 0.09, 0.26, 0.13, 0.20, 0.085, 0.18, 0.18, 0.01, 0.01
536
537# EM_FACTOR_OTHERMONOT ([ugC/g/h] ) :  Other monoterpenes  emission factor      {CHEMISTRY_BVOC}
538EM_FACTOR_OTHERMONOT =  0., 0.17, 0.17, 0.11, 0.11, 0.125, 0.11, 0.274, 0.01, 0.15, 0.155, 0.035, 0.035
539
540# EM_FACTOR_SESQUITERP  ([ugC/g/h] ) :  Sesquiterpenes  emission factor         {CHEMISTRY_BVOC}
541EM_FACTOR_SESQUITERP  =  0., 0.45, 0.45, 0.13, 0.3, 0.36, 0.15, 0.3, 0.25, 0.6, 0.6, 0.08, 0.08
542
543# C_BETA_MONO  ([]) :  Monoterpenes temperature dependency coefficient  {CHEMISTRY_BVOC}
544C_BETA_MONO  =  0.1
545
546# C_BETA_SESQ  ([]) :  Sesquiterpenes temperature dependency coefficient        {CHEMISTRY_BVOC}
547C_BETA_SESQ  =  0.17
548
549# C_BETA_METH  ([]) :  Methanol temperature dependency coefficient      {CHEMISTRY_BVOC}
550C_BETA_METH  =  0.08
551
552# C_BETA_ACET  ([]) :  Acetone temperature dependency coefficient       {CHEMISTRY_BVOC}
553C_BETA_ACET  =  0.1
554
555# C_BETA_OXYVOC  ([]) :  Other oxygenated BVOC temperature dependency coefficient       {CHEMISTRY_BVOC}
556C_BETA_OXYVOC  =  0.13
557
558# EM_FACTOR_ORVOC ([ugC/g/h]  ) :  ORVOC emissions factor       {CHEMISTRY_BVOC }
559EM_FACTOR_ORVOC =  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5
560
561# EM_FACTOR_OVOC ([ugC/g/h]        ) :  OVOC emissions factor   {CHEMISTRY_BVOC}
562EM_FACTOR_OVOC =  0., 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5
563
564# EM_FACTOR_MBO ([ugC/g/h]  ) :  MBO emissions factor   {CHEMISTRY_BVOC }
565EM_FACTOR_MBO =  0., 2.e-5, 2.e-5, 1.4, 2.e-5, 2.e-5, 0.14, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5, 2.e-5
566
567# EM_FACTOR_METHANOL ([ugC/g/h]  ) :  Methanol emissions factor         {CHEMISTRY_BVOC }
568EM_FACTOR_METHANOL =  0., 0.8, 0.8, 1.8, 0.9, 1.9, 1.8, 1.8, 1.8, 0.7, 0.9, 2., 2.
569
570# EM_FACTOR_ACETONE ([ugC/g/h]     ) :  Acetone emissions factor        {CHEMISTRY_BVOC }
571EM_FACTOR_ACETONE =  0., 0.25, 0.25, 0.3, 0.2, 0.33, 0.3, 0.25, 0.25, 0.2, 0.2, 0.08, 0.08
572
573# EM_FACTOR_ACETAL ([ugC/g/h]  ) :  Acetaldehyde emissions factor       {CHEMISTRY_BVOC}
574EM_FACTOR_ACETAL =  0., 0.2, 0.2, 0.2, 0.2, 0.25, 0.25, 0.16, 0.16, 0.12, 0.12, 0.035, 0.02
575
576# EM_FACTOR_FORMAL ([ugC/g/h]  ) :  Formaldehyde emissions factor       {CHEMISTRY_BVOC }
577EM_FACTOR_FORMAL =  0., 0.04, 0.04, 0.08, 0.04, 0.04, 0.04, 0.04, 0.04, 0.025, 0.025, 0.013, 0.013
578
579# EM_FACTOR_ACETIC ([ugC/g/h]  ) :  Acetic Acid emissions factor        {CHEMISTRY_BVOC }
580EM_FACTOR_ACETIC =  0., 0.025, 0.025,0.025,0.022,0.08,0.025,0.022,0.013,0.012,0.012,0.008,0.008
581
582# EM_FACTOR_FORMIC ([ugC/g/h]  ) :  Formic Acid emissions factor        {CHEMISTRY_BVOC}
583EM_FACTOR_FORMIC =  0., 0.015, 0.015, 0.02, 0.02, 0.025, 0.025, 0.015, 0.015,0.010,0.010,0.008,0.008
584
585# EM_FACTOR_NO_WET ([ngN/m^2/s]) :  NOx emissions factor wet soil emissions and exponential dependancy factor   {CHEMISTRY_BVOC}
586EM_FACTOR_NO_WET =  0., 2.6, 0.06, 0.03, 0.03, 0.03, 0.03, 0.03, 0.03, 0.36, 0.36, 0.36, 0.36
587
588# EM_FACTOR_NO_DRY ([ngN/m^2/s] ) :  NOx emissions factor dry soil emissions and exponential dependancy factor          {CHEMISTRY_BVOC}
589EM_FACTOR_NO_DRY =  0., 8.60, 0.40, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 2.65, 2.65, 2.65, 2.65
590
591# LARCH ([-]  ) :  Larcher 1991 SAI/LAI ratio   {CHEMISTRY_BVOC }
592LARCH =  0., 0.015, 0.015, 0.003, 0.005, 0.005, 0.003, 0.005, 0.003, 0.005, 0.005, 0.008, 0.008
593
594# NUE_OPT ([(mumol[CO2] s-1) (gN[leaf])-1]) :  Nitrogen use efficiency of Vcmax         {OK_STOMATE}
595NUE_OPT =  -9999.,  14.,  30., 20., 33.,  38., 15., 38., 22.,  45.,  45.,  60.,  60.   
596
597# CN_LEAF_MIN ([gC/gN] ) :  minimum CN ratio of leaves          {OK_STOMATE}
598CN_LEAF_MIN =  -9999., 16., 16., 28., 16., 16., 28., 16., 16., 16., 16., 16., 16. 
599
600# CN_LEAF_MAX ([gC/gN] ) :  maximum CN ratio of leaves          {OK_STOMATE}
601CN_LEAF_MAX =  -9999., 45., 45., 75., 45., 45., 75., 45., 45., 45., 45., 45., 45. 
602
603# CN_LEAF_INIT () :     {}
604CN_LEAF_INIT =  -9999., 25.,  25.,  41.7,  25.,  25.,  43., 25.,  25.,  25.,  25.,  25.,  25.
605
606# EXT_COEFF_N ([(m2[ground]) (m-2[leaf])]) :  Extinction coefficient of the leaf N content profile within the canopy    {OK_STOMATE}
607EXT_COEFF_N =   0.15, 0.15, 0.15,0.15,0.15, 0.15,0.15,0.15,0.15, 0.15, 0.15, 0.15, 0.15
608
609# SLA ([m^2/gC]) :  specif leaf area    {OK_STOMATE}
610SLA =  1.5E-2, 1.53E-2, 2.6E-2, 9.26E-3, 2E-2, 2.6E-2, 9.26E-3, 2.6E-2, 1.9E-2, 2.6E-2, 2.6E-2, 2.6E-2, 2.6E-2
611
612# SLAINIT ([m^2/gC]) :  initial specif leaf area at (ie at bottom of canopy eq. lai     {OK_STOMATE}
613SLAINIT =  2.6E-2, 2.6E-2, 4.4E-2, 1.4E-2, 3.0E-2, 3.9E-2, 1.3E-2, 3.7E-2, 2.4E-2, 3.1E-2, 3.1E-2, 3.9E-2, 3.9E-2
614
615# AVAILABILITY_FACT  ([-]   ) :  Calculate dynamic mortality in lpj_gap, pft dependent parameter        {OK_STOMATE }
616AVAILABILITY_FACT  =  -9999., 0.14, 0.14, 0.10, 0.10, 0.10, 0.05, 0.05, 0.05, -9999., -9999., -9999., -9999. 
617
618# R0  ([-]    ) :  Standard root allocation     {OK_STOMATE }
619R0  =  -9999., .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30
620
621# S0  ([-]    ) :  Standard sapwood allocation          {OK_STOMATE }
622S0  =  -9999., .25, .25, .30, .30, .30, .30, .30, .30, .30, .30, .30, .30
623
624# FRAC_GROWTHRESP ([-]) :  fraction of GPP which is lost as growth respiration  {OK_STOMATE}
625FRAC_GROWTHRESP =  -9999., 0.35, 0.35, 0.28, 0.28, 0.28, 0.35, 0.35, 0.35, 0.28, 0.28, 0.28, 0.28
626
627# COEFF_MAINT_INIT ([gC/gN/day]) :  maintenance respiration coefficient at 10 deg C     {OK_STOMATE}
628COEFF_MAINT_INIT =  -9999., 3.06E-2, 3.06E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2, 6.46E-2
629
630# TREF_MAINT_RESP ([degC]) :  maintenance respiration Temperature coefficient   {OK_STOMATE}
631TREF_MAINT_RESP =    &  -9999., 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02, 56.02  /)   
632
633# TMIN_MAINT_RESP ([degC]) :  maintenance respiration Temperature coefficient   {OK_STOMATE}
634TMIN_MAINT_RESP =    &  -9999., 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02, 46.02  /)   
635
636# E0_MAINT_RESP ([-]) :  maintenance respiration Temperature coefficient        {OK_STOMATE}
637E0_MAINT_RESP =    &  -9999., 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56, 308.56  /)   
638
639# FLAM ([-]) :  flamability: critical fraction of water holding capacity        {OK_STOMATE}
640FLAM =  -9999., .15, .25, .25, .25, .25, .25, .25, .25, .25, .25, .35, .35
641
642# RESIST ([-]) :  fire resistance       {OK_STOMATE}
643RESIST =  -9999., .95, .90, .12, .50, .12, .12, .12, .12, .0, .0, .0, .0 
644
645# COEFF_LCCHANGE_1 ([-]) :  Coeff of biomass export for the year        {OK_STOMATE}
646COEFF_LCCHANGE_1 =  -9999., 0.897, 0.897, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597, 0.597 
647
648# COEFF_LCCHANGE_10 ([-]) :  Coeff of biomass export for the decade     {OK_STOMATE}
649COEFF_LCCHANGE_10 =  -9999., 0.103, 0.103, 0.299, 0.299, 0.299, 0.299, 0.299, 0.299, 0.299, 0.403, 0.299, 0.403
650
651# COEFF_LCCHANGE_100 ([-]) :  Coeff of biomass export for the century   {OK_STOMATE}
652COEFF_LCCHANGE_100 =  -9999., 0., 0., 0.104, 0.104, 0.104, 0.104, 0.104, 0.104, 0.104, 0., 0.104, 0.
653
654# LAI_MAX_TO_HAPPY ([-]) :  threshold of LAI below which plant uses carbohydrate reserves       {OK_STOMATE}
655LAI_MAX_TO_HAPPY =  -9999., .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5, .5 
656
657# LAI_MAX ([m^2/m^2]) :  maximum LAI, PFT-specific      {OK_STOMATE}
658LAI_MAX =  -9999., 7.0, 5.0, 5.0, 4.0, 5.0, 3.5, 4.0, 3.0, 2.5, 2.0, 5.0, 5.0
659
660# PHENO_TYPE ([-]) :  type of phenology, 0      {OK_STOMATE}
661PHENO_TYPE =  0, 1, 3, 1, 1, 2, 1, 2, 2, 4, 4, 2, 3
662
663# PHENO_GDD_CRIT_C ([-]) :  critical gdd, tabulated (C), constant c of aT^2+bT+c        {OK_STOMATE}
664PHENO_GDD_CRIT_C =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 270., 400., 125., 400.
665
666# PHENO_GDD_CRIT_B ([-]) :  critical gdd, tabulated (C), constant b of aT^2+bT+c        {OK_STOMATE}
667PHENO_GDD_CRIT_B =  -9999., -9999., -9999., -9999., -9999., -9999., -9999.,-9999., -9999., 6.25, 0., 0., 0.
668
669# PHENO_GDD_CRIT_A ([-]) :  critical gdd, tabulated (C), constant a of aT^2+bT+c        {OK_STOMATE}
670PHENO_GDD_CRIT_A =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0.03125,  0., 0., 0.
671
672# PHENO_MOIGDD_T_CRIT ([C]) :  Average temperature threashold for C4 grass used in pheno_moigdd         {OK_STOMATE}
673PHENO_MOIGDD_T_CRIT =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 22.0, -9999., -9999.
674
675# NGD_CRIT ([days]) :  critical ngd, tabulated. Threshold -5 degrees    {OK_STOMATE}
676NGD_CRIT =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., 0., -9999., -9999., -9999., -9999., -9999.
677
678# NCDGDD_TEMP ([C] ) :  critical temperature for the ncd vs. gdd function in phenology  {OK_STOMATE}
679NCDGDD_TEMP =  -9999., -9999., -9999., -9999., -9999., 5., -9999., 0., -9999., -9999., -9999., -9999., -9999.
680
681# HUM_FRAC ([%]) :  critical humidity (relative to min/max) for phenology       {OK_STOMATE}
682HUM_FRAC =  -9999., -9999., .5, -9999., -9999., -9999., -9999., -9999.,  -9999., .5, .5, .5,.5     
683
684# HUM_MIN_TIME ([days]) :  minimum time elapsed since moisture minimum  {OK_STOMATE}
685HUM_MIN_TIME =  -9999., -9999., 50., -9999., -9999., -9999., -9999., -9999., -9999., 35., 35., 75., 75.
686
687# TAU_SAP ([days]) :  sapwood -> heartwood conversion time      {OK_STOMATE}
688TAU_SAP =  -9999., 730., 730., 730., 730., 730., 730., 730., 730., -9999., -9999., -9999., -9999.
689
690# TAU_LEAFINIT ([days]) :  time to attain the initial foliage using the carbohydrate reserve    {OK_STOMATE}
691TAU_LEAFINIT =  -9999., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10., 10.
692
693# TAU_FRUIT ([days]) :  fruit lifetime  {OK_STOMATE}
694TAU_FRUIT =  -9999., 90., 90., 90., 90., 90., 90., 90., 90., -9999., -9999., -9999., -9999.
695
696# TAU_ROOT ([days]) :  root longivety   {OK_STOMATE}
697TAU_ROOT =  -9999., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256., 256.
698
699# ECUREUIL ([-]) :  fraction of primary leaf and root allocation put into reserve       {OK_STOMATE}
700ECUREUIL =  -9999., .0, 1., .0, .0, 1., .0, 1., 1., 1., 1., 1., 1.
701
702# ALLOC_MIN ([-]) :  minimum allocation above/below     {OK_STOMATE}
703ALLOC_MIN =  -9999., 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, -9999., -9999., -9999., -9999. 
704
705# ALLOC_MAX ([-]) :  maximum allocation above/below     {OK_STOMATE}
706ALLOC_MAX =  -9999., 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, 0.8, -9999., -9999., -9999., -9999.
707
708# DEMI_ALLOC  ([-]) :  mean allocation above/below      {OK_STOMATE}
709DEMI_ALLOC  =  -9999., 5., 5., 5., 5., 5., 5., 5., 5., -9999., -9999., -9999., -9999.
710
711# LEAFLIFE_TAB ([years]) :  leaf longevity      {OK_STOMATE}
712LEAFLIFE_TAB =  -9999., .5, 2., .33, 1., 2., .33, 2., 2., 2., 2., 2., 2. 
713
714# K_LATOSA_MAX ([-] ) :  Maximum leaf-to-sapwood area ratio     {OK_STOMATE}
715K_LATOSA_MAX =  (-9999., 5., 5., 5., 3., 5., 5., 5., 5., -9999., -9999., -9999., -9999.)*1.e3
716
717# K_LATOSA_MIN ([-] ) :  Minimum leaf-to-sapwood area ratio     {OK_STOMATE}
718K_LATOSA_MIN =  (-9999., 5., 5., 5., 3., 5., 5., 5., 5., -9999., -9999., -9999., -9999.)*1.e3
719
720# LC_leaf  ([-]   ) :  Lignine/C ratio of leaf pool     {OK_STOMATE }
721LC_leaf  =  -9999., 0.18, 0.18, 0.24, 0.18, 0.18, 0.24, 0.18, 0.24, 0.09, 0.09, 0.09, 0.09
722
723# LC_sapabove  ([-]   ) :  Lignine/C ratio of sapabove pool     {OK_STOMATE }
724LC_sapabove  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
725
726# LC_sapbelow  ([-]   ) :  Lignine/C ratio of sapbelow pool     {OK_STOMATE }
727LC_sapbelow  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
728
729# LC_heartabove  ([-]   ) :  Lignine/C ratio of heartabove pool         {OK_STOMATE }
730LC_heartabove  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
731
732# LC_heartbelow  ([-]   ) :  Lignine/C ratio of heartbelow pool         {OK_STOMATE }
733LC_heartbelow  =  -9999., 0.23, 0.23, 0.29, 0.23, 0.23, 0.29, 0.23, 0.29, 0.09, 0.09, 0.09, 0.09
734
735# LC_fruit ([-]   ) :  Lignine/C ratio of fruit pool    {OK_STOMATE }
736LC_fruit =  -9999., 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09, 0.09
737
738# LC_root ([-]   ) :  Lignine/C ratio of fruit pool     {OK_STOMATE }
739LC_root =  -9999., 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22, 0.22
740
741# LC_carbres ([-]   ) :  Lignine/C ratio of carbres pool        {OK_STOMATE }
742LC_carbres =  -9999., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.
743
744# LC_labile ([-]   ) :  Lignine/C ratio of labile pool  {OK_STOMATE }
745LC_labile =  -9999., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0., 0.
746
747# DECOMP_FACTOR  () :  Multpliactive factor modifying the standard decomposition factor for each SOM pool       {}
748DECOMP_FACTOR  =  -9999., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1., 1.2, 1.4 
749
750# PIPE_DENSITY  () :    {}
751PIPE_DENSITY  =  -9999., 3.e5, 3.e5, 2.e5, 3.e5, 3.e5, 2.e5, 3.e5, 2.e5, 2.e5, 2.e5, 2.e5, 2.e5
752
753# TREE_FF ([-]  ) :  Tree form factor reducing the volume of a cylinder         {OK_STOMATE }
754TREE_FF =  -9999., 0.6, 0.6, 0.6, 0.6, 0.6, 0.8, 0.8, 0.8, 0., 0., 0., 0.
755
756# PIPE_TUNE1 ([-]    ) :  crown area    {OK_STOMATE }
757PIPE_TUNE1 =  -9999., 100., 100., 100., 100., 100., 100., 100., 100., 0., 0., 0., 0. 
758
759# PIPE_TUNE2  ([-]      ) :  height     {OK_STOMATE }
760PIPE_TUNE2  =  -9999., 40., 40., 40., 40., 40., 40., 40., 40., 0., 0., 0., 0.   
761
762# PIPE_TUNE3 ([-]    ) :  height        {OK_STOMATE }
763PIPE_TUNE3 =  -9999., 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0., 0., 0., 0.   
764
765# PIPE_TUNE4 ([-]  ) :  needed for stem diameter        {OK_STOMATE }
766PIPE_TUNE4 =  -9999., 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0.3, 0., 0., 0., 0.
767
768# PIPE_K1  ([-]   ) :           {OK_STOMATE }
769PIPE_K1  =  -9999., 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 8.e3, 0., 0., 0., 0. 
770
771# PIPE_TUNE_EXP_COEFF  ([-]   ) :  pipe tune exponential coeff          {OK_STOMATE }
772PIPE_TUNE_EXP_COEFF  =  -9999., 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 1.6, 0., 0., 0., 0.   
773
774# MASS_RATIO_HEART_SAP  ([-]   ) :  mass ratio (heartwood+sapwood)/heartwood    {OK_STOMATE }
775MASS_RATIO_HEART_SAP  =  -9999., 3., 3., 3., 3., 3., 3., 3., 3., 0., 0., 0., 0.   
776
777# CANOPY_COVER ([-] ) :  Test values for canopy cover   {OK_STOMATE, OK_FUNCTIONAL_ALLOCATION}
778CANOPY_COVER =  -9999., 0.9, 0.9, 0.7, 0.7, 0.7, 0.6, 0.5, 0.5, 0.9, 0.9, 0.9, 0.9
779
780# NMAXTREES ([trees ha-1]) :  number of seedlings planted at the start of a rotation    {FOREST_MANAGEMENT }
781NMAXTREES =  (-9999., 10., 10., 10., 10., 10., 2., 2., 2., 10., 10., 10., 10.)*1.e3
782
783# HEIGHT_INIT_MIN ([m]) :       {FUNCTIONAL ALLOCATION }
784HEIGHT_INIT_MIN =  -9999., 2, 2, 2, 2, 2, 3, 3, 3, 3, 0.1, 0.1, 0.1, 0.1
785
786# HEIGHT_INIT_MAX ([m]) :       {FUNCTIONAL ALLOCATION }
787HEIGHT_INIT_MAX =  -9999., 3, 3, 3, 3, 3, 4, 4, 4, 4, 0.2, 0.2, 0.2, 0.2
788
789# LAI_TO_HEIGHT ([m m2 m-2] ) :  Convertion factor from lai to vegetation height for grasses and crops  {OK_STOMATE, OK_FUNCTIONAL_ALLOCATION}
790LAI_TO_HEIGHT =  -9999., 
791
792# DELEUZE_A () :  intercept of the intra-tree competition within a stand        {OK_STOMATE, functional allocation }
793DELEUZE_A =  -9999., 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, 0.23, -9999., -9999., -9999., -9999.
794
795# DELEUZE_B () :  slope of the intra-tree competition within a stand    {OK_STOMATE, functional allocation  }
796DELEUZE_B =  -9999., 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, 0.58, -9999., -9999., -9999., -9999.
797
798# DELEUZE_P_ALL () :  Percentile of the circumferences that receives photosynthates     {OK_STOMATE, functional allocation  }
799DELEUZE_P_ALL =  -9999., 0.5, 0.5, 0.99, 0.99, 0.99, 0.99, 0.99, 0.99, 0.99, -9999., -9999., -9999., -9999.
800
801# M_DV () :     {FOREST_MANAGEMENT }
802M_DV =  -9999., 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, 1.05, -9999., -9999., -9999., -9999.
803
804# FRUIT_ALLOC ([-] ) :  Guestimates - should be confirmed       {OK_STOMATE}
805FRUIT_ALLOC =  (-9999., 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0., 0., 0., 0.)
806
807# LABILE_RESERVE  () :  Depends on the allocation scheme        {}
808LABILE_RESERVE  =  -9999., 30., 60., 60., 30., 60., 30., 30., 30., 30., 30., 30. 
809
810# EVERGREEN_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of evergreen trees   {OK_STOMATE, functional allocation }
811EVERGREEN_RESERVE =  -9999., 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05, 0.05 
812
813# DECIDUOUS_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of   {OK_STOMATE, functional allocation }
814DECIDUOUS_RESERVE =  -9999., 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12, 0.12
815
816# SENESCENSE_RESERVE ([-]  ) :  Fraction of sapwood mass stored in the reserve pool of          {OK_STOMATE, functional allocation }
817SENESCENSE_RESERVE =  -9999., 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15, 0.15 
818
819# FCN_WOOD ([-] ) :  CN of wood for allocation, relative to leaf CN     {OK_STOMATE}
820FCN_WOOD =  -9999., .087, .087, .087, .087, .087, .087, .087, .087, .087, .087, .087
821
822# FCN_ROOT ([-] ) :  CN roots for allocation, relative to leaf CN       {OK_STOMATE}
823FCN_ROOT =  -9999., 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86, 0.86
824
825# BRANCH_RATIO () :     {FOREST_MANAGEMENT }
826BRANCH_RATIO =  0.0, 0.38, 0.38, 0.25, 0.38, 0.38, 0.25, 0.38, 0.25, 0.0, 0.0, 0.0, 0.0   
827
828# K_ROOT ([m^{3} kg^{-1} s^{-1} MPa^{-1}] ) :  Fine root specific conductivity  {OK_STOMATE}
829K_ROOT =  (-9999., 4., 4., 4., 4., 4., 4., 4., 4., 50., 50., 50., 50.)*1.e-7 
830
831# K_SAP ([m^{2} s^{-1} MPa^{-1}] ) :  Sapwood specific conductivity     {OK_STOMATE}
832K_SAP =  (-9999., 50., 10., 8., 5., 30., 8., 20., 8., -9999., -9999., -9999., -9999.)*1.e-4
833
834# LEAFFALL ([days]) :  length of death of leaves, tabulated     {OK_STOMATE}
835LEAFFALL =  -9999., -9999., 10., -9999., -9999., 10., -9999., 10., 10., 10., 10., 10., 10. 
836
837# LEAFAGECRIT ([days]) :  critical leaf age, tabulated  {OK_STOMATE}
838LEAFAGECRIT =  -9999., 730., 180., 910., 730., 180., 910., 180., 180., 120., 120., 90., 90.   
839
840# SENESCENCE_TYPE ([-]) :  type of senescence, tabulated        {OK_STOMATE}
841SENESCENCE_TYPE =  none, none, dry, none, none, cold, none, cold, cold, mixed, mixed, mixed, mixed 
842
843# SENESCENCE_HUM ([-] ) :  critical relative moisture availability for senescence       {OK_STOMATE}
844SENESCENCE_HUM =  -9999., -9999., .3, -9999., -9999., -9999., -9999., -9999., -9999., .2, .2, .3, .2 
845
846# NOSENESCENCE_HUM ([-]) :  relative moisture availability above which there is no humidity-related senescence  {OK_STOMATE}
847NOSENESCENCE_HUM =  -9999., -9999., .8, -9999., -9999., -9999., -9999., -9999., -9999., .3, .3, .3, .3 
848
849# MAX_TURNOVER_TIME ([days]) :  maximum turnover time for grasse        {OK_STOMATE}
850MAX_TURNOVER_TIME =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999.,  80.,  80., 80., 80. 
851
852# MIN_TURNOVER_TIME ([days]) :  minimum turnover time for grasse        {OK_STOMATE}
853MIN_TURNOVER_TIME =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 10., 10., 10., 10. 
854
855# RECYCLE_LEAF ([-]) :  Fraction of N leaf that is recycled when leaves are senescent   {OK_STOMATE}
856RECYCLE_LEAF =  -9999., 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5, 0.5 
857
858# RECYCLE_ROOT ([-]) :  Fraction of N root that is recycled when roots are senescent    {OK_STOMATE}
859RECYCLE_ROOT =  -9999., 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2, 0.2 
860
861# MIN_LEAF_AGE_FOR_SENESCENCE ([days] ) :  minimum leaf age to allow senescence g       {OK_STOMATE}
862MIN_LEAF_AGE_FOR_SENESCENCE =  -9999., -9999., 90., -9999., -9999., 90., -9999., 60., 60., 30., 30., 30., 30.
863
864# SENESCENCE_TEMP_C ([-]) :  critical temperature for senescence (C), constant c of aT^2+bT+c, tabulated        {OK_STOMATE}
865SENESCENCE_TEMP_C =  -9999., -9999., -9999., -9999., -9999., 12., -9999., 7., 2., -1.375, 5., 5., 10.
866
867# SENESCENCE_TEMP_B ([-]) :  critical temperature for senescence (C), constant b of aT^2+bT+c ,tabulated        {OK_STOMATE }
868SENESCENCE_TEMP_B =  -9999., -9999., -9999., -9999., -9999., 0., -9999., 0., 0., .1, 0., 0., 0.
869
870# SENESCENCE_TEMP_A ([-] ) :  critical temperature for senescence (C), constant a of aT^2+bT+c , tabulated      {OK_STOMATE}
871SENESCENCE_TEMP_A =  -9999., -9999., -9999., -9999., -9999., 0., -9999., 0., 0.,.00375, 0., 0., 0. 
872
873# GDD_SENESCENCE ([days] ) :  minimum gdd to allow senescence of crops          {OK_STOMATE}
874GDD_SENESCENCE =  -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., -9999., 950., 4000.
875
876# ALWAYS_INIT ([BOOLEAN]) :  Take carbon from atmosphere if carbohydrate reserve too small      {OK_STOMATE}
877ALWAYS_INIT =  y, y, y, y, y, y, y, y, y, y, n, y, y
878
879# MAX_SOIL_N_BNF ([gN/m**2] ) :  Value of total N (NH4+NO3) above which we stop adding N via BNF (gN/m**2)      {OK_STOMATE}
880MAX_SOIL_N_BNF =  0.0, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 1.5, 2., 2., 2., 2.
881
882# MANURE_PFTWEIGHT ([gC/gN] ) :  Weight of the distribution of manure over the PFT surface      {OK_STOMATE}
883MANURE_PFTWEIGHT =  0., 0., 0., 0., 0., 0., 0., 0., 0., 1., 1., 1., 1. 
884
885# RESIDENCE_TIME ([years]) :  residence time of trees   {OK_DGVM and NOT(LPJ_GAP_CONST_MORT)}
886RESIDENCE_TIME =  -9999., 30.0, 30.0, 40.0, 40.0, 40.0, 80.0, 80.0, 80.0, 0.0, 0.0, 0.0, 0.0 
887
888# TMIN_CRIT ([C]) :  critical tmin, tabulated   {OK_STOMATE}
889TMIN_CRIT =  -9999.,  0.0, 0.0, -30.0, -14.0, -30.0, -45.0, -45.0, -9999., -9999., -9999., -9999., -9999.
890
891# TCM_CRIT ([C]) :  critical tcm, tabulated     {OK_STOMATE}
892TCM_CRIT =  -9999., -9999., -9999., 5.0, 15.5, 15.5, -8.0, -8.0, -8.0, -9999., -9999., -9999., -9999.
893
894# HERBIVORES ([FLAG]) :  herbivores allowed?    {OK_STOMATE }
895HERBIVORES =  n
896
897# TREAT_EXPANSION ([FLAG]) :  treat expansion of PFTs across a grid cell?       {OK_STOMATE }
898TREAT_EXPANSION =  n
899
900# SLA_DYN ([FLAG]) :  Account for a dynamic SLA         {OK_STOMATE}
901SLA_DYN =  n
902
903# LPJ_GAP_CONST_MORT ([FLAG]) :  Constant mortality     {OK_STOMATE AND NOT OK_DGVM}
904LPJ_GAP_CONST_MORT =  y/n depending on OK_DGVM
905
906# HARVEST_AGRI ([FLAG]) :  Harvest model for agricultural PFTs.         {OK_STOMATE }
907HARVEST_AGRI =  y
908
909# FIRE_DISABLE ([FLAG]) :  no fire allowed      {OK_STOMATE }
910FIRE_DISABLE =  y
911
912# SPINUP_ANALYTIC (BOOLEAN    ) :  Activation of the analytic resolution of the spinup.         {OK_STOMATE}
913SPINUP_ANALYTIC =  n
914
915# AGRICULTURE ([FLAG]) :  agriculture allowed?  {OK_SECHIBA or OK_STOMATE}
916AGRICULTURE =  y
917
918# IMPOSE_VEG ([FLAG]) :  Should the vegetation be prescribed ?  {OK_SECHIBA or OK_STOMATE}
919IMPOSE_VEG =  n
920
921# IMPOSE_SOILT ([FLAG]) :  Should the soil type be prescribed ?         {IMPOSE_VEG}
922IMPOSE_SOILT =  n
923
924# IMPOSE_NINPUT_DEP ([FLAG]) :  Should the N inputs from atmospheric deposition be prescribed ?         {NOT IMPOSE_CN}
925IMPOSE_NINPUT_DEP =  n
926
927# IMPOSE_NINPUT_FERT ([FLAG]) :  Should the N inputs from fertilizer be prescribed ?    {-}
928IMPOSE_NINPUT_FERT =  n
929
930# IMPOSE_NINPUT_MANURE ([FLAG]) :  Should the N inputs from manure be prescribed ?      {-}
931IMPOSE_NINPUT_MANURE =  n
932
933# IMPOSE_NINPUT_BNF ([FLAG]) :  Should the N inputs from biological nitrogen fixation (BNF) be prescribed ?     {-}
934IMPOSE_NINPUT_BNF =  n
935
936# LAI_MAP ([FLAG]) :  Read the LAI map  {OK_SECHIBA or OK_STOMATE}
937LAI_MAP =  n
938
939# VEGET_UPDATE ([years]) :  Update vegetation frequency: 0Y or 1Y       {}
940VEGET_UPDATE =  0Y
941
942# VEGETMAP_RESET ([FLAG] ) :  Flag to change vegetation map without activating LAND USE change for carbon fluxes. At the same time carbon related variables are reset to zero.  {}
943VEGETMAP_RESET =  n
944
945# NINPUT_REINIT ([FLAG] ) :  booleen to indicate that a new N INPUT file will be used.  {-}
946NINPUT_REINIT =  y
947
948# NINPUT_YEAR ([FLAG] ) :  Year of the N input map to be read   {-}
949NINPUT_YEAR =  1
950
951# NINPUT_SUFFIX_YEAR ([FLAG] ) :  Do the Ninput dataset have a 'year' suffix    {-}
952NINPUT_SUFFIX_YEAR =  false
953
954# MAXMASS_SNOW ([kg/m^2]  ) :  The maximum mass of a snow       {OK_SECHIBA}
955MAXMASS_SNOW =  3000.
956
957# SNOWCRI ([kg/m^2]  ) :  Sets the amount above which only sublimation occures          {OK_SECHIBA}
958SNOWCRI =  1.5
959
960# MIN_WIND ([m/s]) :  Minimum wind speed        {OK_SECHIBA}
961MIN_WIND =  0.1
962
963# MAX_SNOW_AGE ([days?]) :  Maximum period of snow aging        {OK_SECHIBA}
964MAX_SNOW_AGE =  50.
965
966# SNOW_TRANS ([m]   ) :  Transformation time constant for snow  {OK_SECHIBA}
967SNOW_TRANS =  0.2
968
969# OK_NUDGE_MC ([FLAG]) :  Activate nudging of soil moisture     {}
970OK_NUDGE_MC =  n
971
972# NUDGE_TAU_MC ([-]) :  Relaxation time for nudging of soil moisture expressed in fraction of the day   {OK_NUDGE_MC}
973NUDGE_TAU_MC =  1
974
975# OK_NUDGE_SNOW ([FLAG]) :  Activate nudging of snow variables  {}
976OK_NUDGE_SNOW =  n
977
978# NUDGE_TAU_SNOW ([-]) :  Relaxation time for nudging of snow variables         {OK_NUDGE_SNOW}
979NUDGE_TAU_SNOW =  1
980
981# NUDGE_INTERPOL_WITH_XIOS ([FLAG]) :  Activate reading and interpolation with XIOS for nudging fields  {OK_NUDGE_MC or OK_NUDGE_SNOW}
982NUDGE_INTERPOL_WITH_XIOS =  n
983
984# HEIGHT_DISPLACEMENT ([m]  ) :  Magic number which relates the height to the displacement height.      {OK_SECHIBA }
985HEIGHT_DISPLACEMENT =  0.75
986
987# Z0_BARE ([m]   ) :  bare soil roughness length        {OK_SECHIBA }
988Z0_BARE =  0.01 
989
990# Z0_ICE ([m]   ) :  ice roughness length       {OK_SECHIBA }
991Z0_ICE =  0.001
992
993# TCST_SNOWA ([days]) :  Time constant of the albedo decay of snow      {OK_SECHIBA }
994TCST_SNOWA =  10.0 
995
996# SNOWCRI_ALB ([cm]  ) :  Critical value for computation of snow albedo         {OK_SECHIBA}
997SNOWCRI_ALB =  10. 
998
999# VIS_DRY ([-]  ) :  The correspondance table for the soil color numbers and their albedo       {OK_SECHIBA }
1000VIS_DRY =  0.24, 0.22, 0.20, 0.18, 0.16, 0.14, 0.12, 0.10, 0.27
1001
1002# NIR_DRY ([-]   ) :  The correspondance table for the soil color numbers and their albedo      {OK_SECHIBA }
1003NIR_DRY =  0.48, 0.44, 0.40, 0.36, 0.32, 0.28, 0.24, 0.20, 0.55
1004
1005# VIS_WET  ([-]   ) :  The correspondance table for the soil color numbers and their albedo     {OK_SECHIBA  }
1006VIS_WET  =  0.12, 0.11, 0.10, 0.09, 0.08, 0.07, 0.06, 0.05, 0.15
1007
1008# NIR_WET ([-]    ) :  The correspondance table for the soil color numbers and their albedo     {OK_SECHIBA }
1009NIR_WET =  0.24, 0.22, 0.20, 0.18, 0.16, 0.14, 0.12, 0.10, 0.31
1010
1011# ALBSOIL_VIS ([-]  ) :         {OK_SECHIBA }
1012ALBSOIL_VIS =  0.18, 0.16, 0.16, 0.15, 0.12, 0.105, 0.09, 0.075, 0.25
1013
1014# ALBSOIL_NIR  ([-]  ) :        {OK_SECHIBA }
1015ALBSOIL_NIR  =  0.36, 0.34, 0.34, 0.33, 0.30, 0.25, 0.20, 0.15, 0.45
1016
1017# ALB_DEADLEAF  ([-]     ) :  albedo of dead leaves, VIS+NIR    {OK_SECHIBA }
1018ALB_DEADLEAF  =  0.12, 0.35
1019
1020# ALB_ICE ([-]  ) :  albedo of ice, VIS+NIR     {OK_SECHIBA}
1021ALB_ICE =  0.60, 0.20
1022
1023# CONDVEG_SNOWA ([-]) :  The snow albedo used by SECHIBA        {OK_SECHIBA}
1024CONDVEG_SNOWA =  1.E+20
1025
1026# ALB_BARE_MODEL ([FLAG]) :  Switch bare soil albedo dependent (if TRUE) on soil wetness        {OK_SECHIBA}
1027ALB_BARE_MODEL =  n
1028
1029# ALB_BG_MODIS ([FLAG]) :  Read bare soil albedo from file with background MODIS data   {OK_SECHIBA}
1030ALB_BG_MODIS =  y
1031
1032# IMPOSE_AZE ([FLAG]) :  Should the surface parameters be prescribed    {OK_SECHIBA}
1033IMPOSE_AZE =  n
1034
1035# CONDVEG_Z0 ([m]) :  Surface roughness         {IMPOSE_AZE}
1036CONDVEG_Z0 =  0.15
1037
1038# ROUGHHEIGHT ([m] ) :  Height to be added to the height of the first level     {IMPOSE_AZE}
1039ROUGHHEIGHT =  0.0
1040
1041# CONDVEG_ALBVIS ([-]) :  SW visible albedo for the surface     {IMPOSE_AZE}
1042CONDVEG_ALBVIS =  0.25
1043
1044# CONDVEG_ALBNIR ([-]  ) :  SW near infrared albedo for the surface     {IMPOSE_AZE}
1045CONDVEG_ALBNIR =  0.25
1046
1047# CONDVEG_EMIS ([-] ) :  Emissivity of the surface for LW radiation     {IMPOSE_AZE}
1048CONDVEG_EMIS =  1.0
1049
1050# ROUGH_DYN ([FLAG]) :  Account for a dynamic roughness height  {OK_SECHIBA}
1051ROUGH_DYN =  y
1052
1053# C1 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1054C1 =  0.32
1055
1056# C2 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1057C2 =  0.264
1058
1059# C3 ([-] ) :  Constant used in the formulation of the ratio of         {ROUGH_DYN}
1060C3 =  15.1
1061
1062# Cdrag_foliage ([-] ) :  Drag coefficient of the foliage       {ROUGH_DYN}
1063Cdrag_foliage =  0.2
1064
1065# Ct ([-] ) :  Heat transfer coefficient of the leaf    {ROUGH_DYN}
1066Ct =  0.01
1067
1068# Prandtl ([-] ) :  Prandtl number used in the calculation of Ct*       {ROUGH_DYN}
1069Prandtl =  0.71
1070
1071# xansmax  ([-] ) :  maximum snow albedo        {OK_SECHIBA}
1072xansmax  =  0.85
1073
1074# xansmin  ([-] ) :  minimum snow albedo        {OK_SECHIBA}
1075xansmin  =  0.50
1076
1077# xans_todry  ([S-1] ) :  albedo decay rate for the dry snow    {OK_SECHIBA}
1078xans_todry  =  0.008
1079
1080# xans_t  ([S-1] ) :  albedo decay rate for the wet snow        {OK_SECHIBA}
1081xans_t  =  0.24
1082
1083# xrhosmax  ([-] ) :  maximum snow density      {OK_SECHIBA}
1084xrhosmax  =  750
1085
1086# xwsnowholdmax1 ([-] ) :  snow holding capacity 1      {OK_SECHIBA}
1087xwsnowholdmax1 =  0.03
1088
1089# xwsnowholdmax2 ([-] ) :  snow holding capacity 2      {OK_SECHIBA}
1090xwsnowholdmax2 =  0.10
1091
1092# xsnowrhohold  ([kg/m3] ) :  snow density      {OK_SECHIBA}
1093xsnowrhohold  =  200.0
1094
1095# ZSNOWTHRMCOND1 ([W/m/K] ) :  Thermal conductivity Coef 1      {OK_SECHIBA}
1096ZSNOWTHRMCOND1 =  0.02 
1097
1098# ZSNOWTHRMCOND2 ([W m5/(kg2 K)] ) :  Thermal conductivity Coef 2       {OK_SECHIBA}
1099ZSNOWTHRMCOND2 =  2.5E-6
1100
1101# ZSNOWTHRMCOND_AVAP ([W/m/K] ) :  Thermal conductivity Coef 1 water vapor      {OK_SECHIBA}
1102ZSNOWTHRMCOND_AVAP =  -0.06023
1103
1104# ZSNOWTHRMCOND_BVAP ([W/m] ) :  Thermal conductivity Coef 2 water vapor        {OK_SECHIBA}
1105ZSNOWTHRMCOND_BVAP =  -2.5425
1106
1107# ZSNOWTHRMCOND_CVAP ([K] ) :  Thermal conductivity Coef 3 water vapor  {OK_SECHIBA}
1108ZSNOWTHRMCOND_CVAP =  -289.99
1109
1110# ZSNOWCMPCT_RHOD ([kg/m3]) :  Snow compaction coefficent       {OK_SECHIBA}
1111ZSNOWCMPCT_RHOD =  150.0
1112
1113# ZSNOWCMPCT_ACM ([1/s]) :  Coefficent for the thermal conductivity     {OK_SECHIBA}
1114ZSNOWCMPCT_ACM =  2.8e-6
1115
1116# ZSNOWCMPCT_BCM ([1/K]) :  Coefficent for the thermal conductivity     {OK_SECHIBA}
1117ZSNOWCMPCT_BCM =  0.04
1118
1119# ZSNOWCMPCT_CCM ([m3/kg] ) :  Coefficent for the thermal conductivity  {OK_SECHIBA}
1120ZSNOWCMPCT_CCM =  460.
1121
1122# ZSNOWCMPCT_V0 ([Pa/s]) :  Vapor coefficent for the thermal conductivity       {OK_SECHIBA}
1123ZSNOWCMPCT_V0 =  3.7e7
1124
1125# ZSNOWCMPCT_VT ([1/K]) :  Vapor coefficent for the thermal conductivity        {OK_SECHIBA}
1126ZSNOWCMPCT_VT =  0.081
1127
1128# ZSNOWCMPCT_VR ([m3/kg]) :  Vapor coefficent for the thermal conductivity      {OK_SECHIBA}
1129ZSNOWCMPCT_VR =  0.018
1130
1131# CB ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1132CB =  5.0
1133
1134# CC ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1135CC =  5.0
1136
1137# CD ([-] ) :  Constant of the Louis scheme     {OK_SECHIBA}
1138CD =  5.0
1139
1140# RAYT_CSTE ([W.m^{-2}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1141RAYT_CSTE =  125
1142
1143# DEFC_PLUS ([K.W^{-1}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1144DEFC_PLUS =  23.E-3
1145
1146# DEFC_MULT ([K.W^{-1}] ) :  Constant in the computation of surface resistance          {OK_SECHIBA}
1147DEFC_MULT =  1.5
1148
1149# NLAI ([-]  ) :  Number of LAI levels  {OK_SECHIBA}
1150NLAI =  20
1151
1152# LAIMAX ([m^2/m^2]   ) :  Maximum LAI  {OK_SECHIBA}
1153LAIMAX =   
1154
1155# DEW_VEG_POLY_COEFF ([-]   ) :  coefficients of the polynome of degree 5 for the dew   {OK_SECHIBA}
1156DEW_VEG_POLY_COEFF =  0.887773, 0.205673, 0.110112, 0.014843, 0.000824, 0.000017 
1157
1158# DOWNREGULATION_CO2 ([FLAG]   ) :  Activation of CO2 downregulation    {OK_SECHIBA}
1159DOWNREGULATION_CO2 =  y
1160
1161# DOWNREGULATION_CO2_BASELEVEL ([ppm]   ) :  CO2 base level     {OK_SECHIBA }
1162DOWNREGULATION_CO2_BASELEVEL =  380.
1163
1164# GB_REF ([s m-1]   ) :  Leaf bulk boundary layer resistance    {}
1165GB_REF =  1./25.
1166
1167# CLAYFRACTION_DEFAULT ([-]   ) :  default fraction of clay     {OK_SECHIBA }
1168CLAYFRACTION_DEFAULT =  0.2 
1169
1170# SILTFRACTION_DEFAULT ([-]   ) :  default fraction of silt     {OK_SECHIBA }
1171SILTFRACTION_DEFAULT =  0.4
1172
1173# BULK_DEFAULT ([kg/m3]   ) :  default bulk density     {OK_SECHIBA }
1174BULK_DEFAULT =  1000.0
1175
1176# PH_DEFAULT ([-]   ) :  default soil pH        {OK_SECHIBA }
1177PH_DEFAULT =  5.5
1178
1179# SANDFRACTION_DEFAULT ([-]   ) :  default fraction of sand     {OK_SECHIBA }
1180SANDFRACTION_DEFAULT =  0.4 
1181
1182# SILTFRACTION_DEFAULT ([-]   ) :  default fraction of silt     {OK_SECHIBA }
1183SILTFRACTION_DEFAULT =  0.4 
1184
1185# MIN_VEGFRAC  ([-]  ) :  Minimal fraction of mesh a vegetation type can occupy         {OK_SECHIBA }
1186MIN_VEGFRAC  =  0.001 
1187
1188# STEMPDIAG_BID  ([K]) :  only needed for an initial LAI if there is no restart file    {OK_SECHIBA }
1189STEMPDIAG_BID  =  280.
1190
1191# LAI_LEVEL_DEPTH ([-]  ) :     {}
1192LAI_LEVEL_DEPTH =  0.15
1193
1194# Oi ([ubar]  ) :  Intercellular oxygen partial pressure        {}
1195Oi =  210000.
1196
1197# TOO_LONG  ([days]   ) :  longest sustainable time without regeneration (vernalization)        {OK_STOMATE}
1198TOO_LONG  =  5.
1199
1200# TAU_FIRE  ([days]    ) :  Time scale for memory of the fire index (days). Validated for one year in the DGVM.         {OK_STOMATE }
1201TAU_FIRE  =  30.
1202
1203# LITTER_CRIT ([gC/m^2]  ) :  Critical litter quantity for fire         {OK_STOMATE }
1204LITTER_CRIT =  200.
1205
1206# FIRE_RESIST_LIGNIN ([-]  ) :          {OK_STOMATE }
1207FIRE_RESIST_LIGNIN =  0.5
1208
1209# CO2FRAC ([-]  ) :  What fraction of a burned plant compartment goes into the atmosphere       {OK_STOMATE }
1210CO2FRAC =  0.95, 0.95, 0., 0.3, 0., 0., 0.95, 0.95
1211
1212# BCFRAC_COEFF ([-]  ) :        {OK_STOMATE }
1213BCFRAC_COEFF =  0.3, 1.3, 88.2 
1214
1215# FIREFRAC_COEFF  ([-]   ) :    {OK_STOMATE }
1216FIREFRAC_COEFF  =  0.45, 0.8, 0.6, 0.13
1217
1218# REF_GREFF ([1/year]  ) :  Asymptotic maximum mortality rate   {OK_STOMATE }
1219REF_GREFF =  0.035
1220
1221# RESERVE_TIME_TREE  ([days]    ) :  maximum time during which reserve is used (trees)          {OK_STOMATE }
1222RESERVE_TIME_TREE  =  30.
1223
1224# RESERVE_TIME_GRASS  ([days]   ) :  maximum time during which reserve is used (grasses)        {OK_STOMATE }
1225RESERVE_TIME_GRASS  =  20. 
1226
1227# PRECIP_CRIT  ([mm/year]  ) :  minimum precip  {OK_STOMATE }
1228PRECIP_CRIT  =  100.
1229
1230# GDD_CRIT_ESTAB ([-]  ) :  minimum gdd for establishment of saplings   {OK_STOMATE }
1231GDD_CRIT_ESTAB =  150. 
1232
1233# FPC_CRIT ([-]  ) :  critical fpc, needed for light competition and establishment      {OK_STOMATE }
1234FPC_CRIT =  0.95
1235
1236# ALPHA_GRASS ([-]   ) :  sapling characteristics : alpha's     {OK_STOMATE }
1237ALPHA_GRASS =  0.5
1238
1239# ALPHA_TREE ([-]   ) :  sapling characteristics : alpha's      {OK_STOMATE }
1240ALPHA_TREE =  1.
1241
1242# STRUCT_TO_LEAVES ([-]   ) :  Fraction of structural carbon in grass and crops as a share of the leaf  {OK_STOMATE }
1243STRUCT_TO_LEAVES =  0.05
1244
1245# LABILE_TO_TOTAL ([-]   ) :  Fraction of the labile pool in trees, grasses and crops as a share of the         {OK_STOMATE }
1246LABILE_TO_TOTAL =  0.01
1247
1248# TAU_HUM_MONTH ([days]  ) :  time scales for phenology and other processes     {OK_STOMATE }
1249TAU_HUM_MONTH =  20. 
1250
1251# TAU_HUM_WEEK ([days]   ) :  time scales for phenology and other processes     {OK_STOMATE }
1252TAU_HUM_WEEK =  7.
1253
1254# TAU_T2M_MONTH ([days]     ) :  time scales for phenology and other processes  {OK_STOMATE }
1255TAU_T2M_MONTH =  20.
1256
1257# TAU_T2M_WEEK ([days]   ) :  time scales for phenology and other processes     {OK_STOMATE }
1258TAU_T2M_WEEK =  7.
1259
1260# TAU_TSOIL_MONTH  ([days]     ) :  time scales for phenology and other processes       {OK_STOMATE }
1261TAU_TSOIL_MONTH  =  20. 
1262
1263# TAU_SOILHUM_MONTH ([days]   ) :  time scales for phenology and other processes        {OK_STOMATE }
1264TAU_SOILHUM_MONTH =  20. 
1265
1266# TAU_GPP_WEEK  ([days]   ) :  time scales for phenology and other processes    {OK_STOMATE }
1267TAU_GPP_WEEK  =  7. 
1268
1269# TAU_GDD ([days]   ) :  time scales for phenology and other processes  {OK_STOMATE }
1270TAU_GDD =  40. 
1271
1272# TAU_NGD ([days]   ) :  time scales for phenology and other processes  {OK_STOMATE }
1273TAU_NGD =  50.
1274
1275# COEFF_TAU_LONGTERM ([days]   ) :  time scales for phenology and other processes       {OK_STOMATE }
1276COEFF_TAU_LONGTERM =  3. 
1277
1278# BM_SAPL_CARBRES  ([-]   ) :           {OK_STOMATE }
1279BM_SAPL_CARBRES  =  5. 
1280
1281# BM_SAPL_SAPABOVE ([-]    ) :          {OK_STOMATE}
1282BM_SAPL_SAPABOVE =  0.5 
1283
1284# BM_SAPL_HEARTABOVE  ([-]    ) :       {OK_STOMATE }
1285BM_SAPL_HEARTABOVE  =  2.
1286
1287# BM_SAPL_HEARTBELOW  ([-]    ) :       {OK_STOMATE }
1288BM_SAPL_HEARTBELOW  =  2. 
1289
1290# BM_SAPL_LABILE  ([-]   ) :    {OK_STOMATE }
1291BM_SAPL_LABILE  =  5. 
1292
1293# INIT_SAPL_MASS_LABILE ([-]    ) :     {OK_STOMATE }
1294INIT_SAPL_MASS_LABILE =  5. 
1295
1296# INIT_SAPL_MASS_LEAF_NAT ([-]    ) :           {OK_STOMATE }
1297INIT_SAPL_MASS_LEAF_NAT =  0.1 
1298
1299# INIT_SAPL_MASS_LEAF_AGRI ([-]    ) :          {OK_STOMATE }
1300INIT_SAPL_MASS_LEAF_AGRI =  1. 
1301
1302# INIT_SAPL_MASS_CARBRES ([-]    ) :    {OK_STOMATE }
1303INIT_SAPL_MASS_CARBRES =  5. 
1304
1305# INIT_SAPL_MASS_ROOT ([-]   ) :        {OK_STOMATE }
1306INIT_SAPL_MASS_ROOT =  0.1 
1307
1308# INIT_SAPL_MASS_FRUIT ([-]    ) :      {OK_STOMATE }
1309INIT_SAPL_MASS_FRUIT =  0.3 
1310
1311# CN_SAPL_INIT  ([-]   ) :      {OK_STOMATE }
1312CN_SAPL_INIT  =  0.5 
1313
1314# MIGRATE_TREE  ([m/year]   ) :         {OK_STOMATE }
1315MIGRATE_TREE  =  10000.
1316
1317# MIGRATE_GRASS ([m/year]   ) :         {OK_STOMATE }
1318MIGRATE_GRASS =  10000.
1319
1320# LAI_INITMIN_TREE ([m^2/m^2]  ) :      {OK_STOMATE }
1321LAI_INITMIN_TREE =  0.3
1322
1323# LAI_INITMIN_GRASS  ([m^2/m^2]    ) :          {OK_STOMATE }
1324LAI_INITMIN_GRASS  =  0.1
1325
1326# DIA_COEFF ([-]   ) :          {OK_STOMATE }
1327DIA_COEFF =  4., 0.5
1328
1329# MAXDIA_COEFF ([-]   ) :       {OK_STOMATE }
1330MAXDIA_COEFF =  100., 0.01 
1331
1332# BM_SAPL_LEAF ([-]  ) :        {OK_STOMATE }
1333BM_SAPL_LEAF =  4., 4., 0.8, 5. 
1334
1335# CN ([-]  ) :  C/N ratio       {OK_STOMATE }
1336CN =  40., 40., 40., 40., 40., 40., 40., 40.
1337
1338# FRAC_SOIL_STRUCT_SUA ([-]) :  frac_soil(istructural,isurface,iabove)  {OK_STOMATE }
1339FRAC_SOIL_STRUCT_SUA =  0.55
1340
1341# FRAC_SOIL_METAB_SUA  ([-]   ) :  frac_soil(imetabolic,isurface,iabove)        {OK_STOMATE }
1342FRAC_SOIL_METAB_SUA  =  0.4 
1343
1344# TURN_METABOLIC ([days] ) :    {OK_STOMATE }
1345TURN_METABOLIC =  0.066
1346
1347# TURN_STRUCT  ([days]) :       {OK_STOMATE }
1348TURN_STRUCT  =  0.245 
1349
1350# TURN_WOODY ([days]) :         {OK_STOMATE }
1351TURN_WOODY =  0.75
1352
1353# METABOLIC_REF_FRAC ([-]) :    {OK_STOMATE }
1354METABOLIC_REF_FRAC =  0.85   
1355
1356# Z_DECOMP ([m]   ) :  scaling depth for soil activity  {OK_STOMATE }
1357Z_DECOMP =  0.2
1358
1359# FRAC_SOIL_STRUCT_A  ([-]) :  frac_soil(istructural,iactive,ibelow)    {OK_STOMATE }
1360FRAC_SOIL_STRUCT_A  =  0.45
1361
1362# FRAC_SOIL_STRUCT_SA ([-]   ) :  frac_soil(istructural,islow,iabove)   {OK_STOMATE}
1363FRAC_SOIL_STRUCT_SA =  0.7   
1364
1365# FRAC_SOIL_STRUCT_SB ([-]   ) :  frac_soil(istructural,islow,ibelow)   {OK_STOMATE }
1366FRAC_SOIL_STRUCT_SB =  0.7   
1367
1368# FRAC_SOIL_METAB_AB  ([-]   ) :  frac_soil(imetabolic,iactive,ibelow)  {OK_STOMATE }
1369FRAC_SOIL_METAB_AB  =  0.45   
1370
1371# METABOLIC_LN_RATIO ([-]   ) :         {OK_STOMATE }
1372METABOLIC_LN_RATIO =  0.018   
1373
1374# SOIL_Q10 ([-]) :      {OK_STOMATE }
1375SOIL_Q10 =  0.69 (
1376
1377# SOIL_Q10_UPTAKE ([-]) :       {OK_STOMATE }
1378SOIL_Q10_UPTAKE =  0.69 (
1379
1380# TSOIL_REF ([C]   ) :          {OK_STOMATE }
1381TSOIL_REF =  30. 
1382
1383# LITTER_STRUCT_COEF  ([-]   ) :        {OK_STOMATE }
1384LITTER_STRUCT_COEF  =  3. 
1385
1386# MOIST_COEFF ([-]   ) :        {OK_STOMATE }
1387MOIST_COEFF =  1.1, 2.4, 0.29
1388
1389# MOISTCONT_MIN ([-]) :  minimum soil wetness to limit the heterotrophic respiration    {OK_STOMATE }
1390MOISTCONT_MIN =  0.25
1391
1392# FRAC_TURNOVER_DAILY  ([-]) :          {OK_STOMATE }
1393FRAC_TURNOVER_DAILY  =  0.55
1394
1395# TAX_MAX ([-]   ) :  maximum fraction of allocatable biomass used for maintenance respiration  {OK_STOMATE }
1396TAX_MAX =  0.8
1397
1398# MIN_GROWTHINIT_TIME  ([days]  ) :  minimum time since last beginning of a growing season      {OK_STOMATE }
1399MIN_GROWTHINIT_TIME  =  300. 
1400
1401# MOIAVAIL_ALWAYS_TREE ([-]   ) :  moisture availability above which moisture tendency doesn't matter   {OK_STOMATE }
1402MOIAVAIL_ALWAYS_TREE =  1.0 
1403
1404# MOIAVAIL_ALWAYS_GRASS  ([-]   ) :  moisture availability above which moisture tendency doesn't matter         {OK_STOMATE }
1405MOIAVAIL_ALWAYS_GRASS  =  0.6 
1406
1407# T_ALWAYS_ADD ([C]    ) :  monthly temp. above which temp. tendency doesn't matter     {OK_STOMATE }
1408T_ALWAYS_ADD =  10.
1409
1410# GDDNCD_REF  ([-]   ) :        {OK_STOMATE }
1411GDDNCD_REF  =  603. 
1412
1413# GDDNCD_CURVE ([-]  ) :        {OK_STOMATE }
1414GDDNCD_CURVE =  0.0091 
1415
1416# GDDNCD_OFFSET ([-]  ) :       {OK_STOMATE }
1417GDDNCD_OFFSET =  64. 
1418
1419# BM_SAPL_RESCALE  ([-]  ) :    {OK_STOMATE }
1420BM_SAPL_RESCALE  =  40. 
1421
1422# MAINT_RESP_MIN_VMAX ([-]  ) :         {OK_STOMATE }
1423MAINT_RESP_MIN_VMAX =  0.3
1424
1425# MAINT_RESP_COEFF  ([-] ) :    {OK_STOMATE }
1426MAINT_RESP_COEFF  =  1.4 
1427
1428# ACTIVE_TO_PASS_CLAY_FRAC ([-] ) :     {OK_STOMATE }
1429ACTIVE_TO_PASS_CLAY_FRAC =  0.68   
1430
1431# ACTIVE_TO_PASS_REF_FRAC ([-]) :  Fixed fraction from Active to Passive pool   {OK_STOMATE }
1432ACTIVE_TO_PASS_REF_FRAC =  0.003
1433
1434# SURF_TO_SLOW_REF_FRAC ([-]) :  Fixed fraction from Surface to Slow pool       {OK_STOMATE }
1435SURF_TO_SLOW_REF_FRAC =  0.4
1436
1437# ACTIVE_TO_CO2_REF_FRAC ([-]) :  Fixed fraction from Active pool to CO2 emission       {OK_STOMATE }
1438ACTIVE_TO_CO2_REF_FRAC =  0.85
1439
1440# SLOW_TO_PASS_REF_FRAC ([-]) :  Fixed fraction from Slow to Passive pool       {OK_STOMATE }
1441SLOW_TO_PASS_REF_FRAC =  0.003
1442
1443# SLOW_TO_CO2_REF_FRAC ([-]) :  Fixed fraction from Slow pool to CO2 emission   {OK_STOMATE }
1444SLOW_TO_CO2_REF_FRAC =  0.55
1445
1446# PASS_TO_ACTIVE_REF_FRAC ([-]) :  Fixed fraction from Passive to Active pool   {OK_STOMATE }
1447PASS_TO_ACTIVE_REF_FRAC =  0.45
1448
1449# PASS_TO_SLOW_REF_FRAC ([-]) :  Fixed fraction from Passive to Slow pool       {OK_STOMATE }
1450PASS_TO_SLOW_REF_FRAC =  0.
1451
1452# ACTIVE_TO_CO2_CLAY_SILT_FRAC ([-]) :  Clay-Silt-dependant fraction from Active pool to CO2 emission   {OK_STOMATE }
1453ACTIVE_TO_CO2_CLAY_SILT_FRAC =  0.68
1454
1455# SLOW_TO_PASS_CLAY_FRAC ([-]) :  Clay-dependant fraction from Slow to Passive pool     {OK_STOMATE }
1456SLOW_TO_PASS_CLAY_FRAC =  -0.009
1457
1458# SOM_TURN_IACTIVE ( [year-1] ) :  turnover in active pool      {OK_STOMATE }
1459SOM_TURN_IACTIVE =  7.3
1460
1461# SOM_TURN_ISLOW ([year-1]) :  turnover in slow pool    {OK_STOMATE }
1462SOM_TURN_ISLOW =  0.2
1463
1464# SOM_TURN_IPASSIVE ([year-1] ) :  turnover in passive pool     {OK_STOMATE }
1465SOM_TURN_IPASSIVE =  0.0045
1466
1467# FSLOW ([-] ) :  converting factor from active to slow pool turnover   {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1468FSLOW =  37
1469
1470# FPASSIVE ([-] ) :  converting factor from active to slow pool turnover        {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1471FPASSIVE =  1617.45 
1472
1473# STOMATE_TAU ([seconds] ) :  turnover of the active pool       {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1474STOMATE_TAU =  4.699E6
1475
1476# DEPTH_MODIFIER ([-] ) :  turnover rate modifier depending on depth    {OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
1477DEPTH_MODIFIER =  1.E6
1478
1479# SOM_TURN_IACTIVE_CLAY_FRAC ([-] ) :  clay-dependant parameter impacting on turnover rate of active pool - Tm parameter of Parton et al. 1993 (-)      {OK_STOMATE }
1480SOM_TURN_IACTIVE_CLAY_FRAC =  0.75
1481
1482# CN_TARGET_IACTIVE_REF ([-] ) :  CN target ratio of active pool for soil min N         {OK_STOMATE }
1483CN_TARGET_IACTIVE_REF =  15.
1484
1485# CN_TARGET_ISLOW_REF ([-] ) :  CN target ratio of slow pool for soil min N     {OK_STOMATE }
1486CN_TARGET_ISLOW_REF =  20.
1487
1488# CN_TARGET_IPASSIVE_REF ([-] ) :  CN target ratio of passive pool for soil min N       {OK_STOMATE }
1489CN_TARGET_IPASSIVE_REF =  10.
1490
1491# CN_TARGET_IACTIVE_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for active pool    {OK_STOMATE }
1492CN_TARGET_IACTIVE_NMIN =  -6.
1493
1494# CN_TARGET_ISLOW_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for slow pool        {OK_STOMATE }
1495CN_TARGET_ISLOW_NMIN =  -4.
1496
1497# CN_TARGET_IPASSIVE_NMIN ([(g m-2)-1] ) :  CN target ratio change per mineral N unit (g m-2) for passive pool          {OK_STOMATE }
1498CN_TARGET_IPASSIVE_NMIN =  -1.5
1499
1500# H_SAXTON ([m^3/m^3]  ) :  Coefficient h for computing soil moisture content at saturation     {OK_STOMATE }
1501H_SAXTON =  0.332
1502
1503# J_SAXTON ([m^3/m^3]  ) :  Coefficient j for computing soil moisture content at saturation     {OK_STOMATE }
1504J_SAXTON =  -7.251*1e-4 
1505
1506# K_SAXTON ([m^3/m^3]  ) :  Coefficient k for computing soil moisture content at saturation     {OK_STOMATE }
1507K_SAXTON =  O.1276
1508
1509# DIFFUSIONO2_POWER_1 ([-]  ) :  Power used in the equation defining the diffusion of oxygen in soil    {OK_STOMATE }
1510DIFFUSIONO2_POWER_1 =  3.33
1511
1512# DIFFUSIONO2_POWER_2 ([-]  ) :  Power used in the equation defining the diffusion of oxygen in soil    {OK_STOMATE }
1513DIFFUSIONO2_POWER_2 =  2.0
1514
1515# F_NOFROST ([-]  ) :  Temperature-related Factor impacting on Oxygen diffusion rate    {OK_STOMATE }
1516F_NOFROST =  1.2
1517
1518# F_FROST ([-]  ) :  Temperature-related Factor impacting on Oxygen diffusion rate      {OK_STOMATE }
1519F_FROST =  0.8
1520
1521# A_ANVF ([-]  ) :  Coefficient used in the calculation of Volumetric fraction of anaerobic microsites  {OK_STOMATE }
1522A_ANVF =  0.85
1523
1524# B_ANVF ([-]  ) :  Coefficient used in the calculation of Volumetric fraction of anaerobic microsites  {OK_STOMATE }
1525B_ANVF =  1.
1526
1527# A_FIXNH4 ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1528A_FIXNH4 =  0.41
1529
1530# B_FIXNH4 ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1531B_FIXNH4 =  -0.47
1532
1533# CLAY_MAX ([-]  ) :  Coefficient used in the calculation of the Fraction of adsorbed NH4+      {OK_STOMATE }
1534CLAY_MAX =  0.63
1535
1536# FWNIT_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1537FWNIT_0 =  -0.0243
1538
1539# FWNIT_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1540FWNIT_1 =  0.9975
1541
1542# FWNIT_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1543FWNIT_2 =  -5.5368
1544
1545# FWNIT_3 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1546FWNIT_3 =  17.651
1547
1548# FWNIT_4 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to soil moisture      {OK_STOMATE }
1549FWNIT_4 =  -12.904
1550
1551# FT_NIT_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1552FT_NIT_0 =  -0.0233
1553
1554# FT_NIT_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1555FT_NIT_1 =  0.3094
1556
1557# FT_NIT_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1558FT_NIT_2 =  -0.2234
1559
1560# FT_NIT_3 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1561FT_NIT_3 =  0.1566
1562
1563# FT_NIT_4 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to Temperature       {OK_STOMATE }
1564FT_NIT_4 =  -0.0272
1565
1566# FPH_0 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1567FPH_0 =  -1.2314
1568
1569# FPH_1 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1570FPH_1 =  0.7347
1571
1572# FPH_2 ([-]  ) :  Coefficient used in the calculation of the Response of Nitrification to pH   {OK_STOMATE }
1573FPH_2 =  -0.0604
1574
1575# FTV_0 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1576FTV_0 =  2.72
1577
1578# FTV_1 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1579FTV_1 =  34.6
1580
1581# FTV_2 ([-]  ) :  Coefficient used in the calculation of the response of NO2 or NO production during nitrificationof to Temperature    {OK_STOMATE }
1582FTV_2 =  9615.
1583
1584# K_NITRIF ([day**-1]  ) :  Nitrification rate at 20 ◩C and field capacity    {OK_STOMATE }
1585K_NITRIF =  2.0
1586
1587# N2O_NITRIF_P ([gN-N2O (gN-NO3)-1]  ) :  Reference n2o production per N-NO3 produced g N-N2O   {OK_STOMATE }
1588N2O_NITRIF_P =  0.0006
1589
1590# NO_NITRIF_P ([gN-NO (gN-NO3)-1]  ) :  Reference NO production per N-NO3 produced g N-N2O      {OK_STOMATE }
1591NO_NITRIF_P =  0.0025
1592
1593# CHEMO_T0 ([-]  ) :  Coefficient used in the calculation of the Response of NO production from chemodenitrification to Temperature     {OK_STOMATE }
1594CHEMO_T0 =  -31494
1595
1596# CHEMO_PH0 ([-]  ) :  Coefficient used in the calculation of the Response of NO production from chemodenitrification to pH     {OK_STOMATE }
1597CHEMO_PH0 =  -1.62
1598
1599# CHEMO_0 ([-]  ) :  Coefficient used in the calculation of NO production from chemodenitrification     {OK_STOMATE }
1600CHEMO_0 =  30.
1601
1602# CHEMO_1 ([-]  ) :  Coefficient used in the calculation of NO production from chemodenitrification     {OK_STOMATE }
1603CHEMO_1 =  16565
1604
1605# FT_DENIT_0 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1606FT_DENIT_0 =  2.
1607
1608# FT_DENIT_1 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1609FT_DENIT_1 =  22.5
1610
1611# FT_DENIT_2 ([-]  ) :  Coefficient used in the response of relative growth rate of total denitrifiers to Temperature   {OK_STOMATE }
1612FT_DENIT_2 =  10
1613
1614# FPH_NO3_0 ([-]  ) :  Coefficient used in the response of relative growth rate of NO3 denitrifiers to pH       {OK_STOMATE }
1615FPH_NO3_0 =  4.25
1616
1617# FPH_NO3_1 ([-]  ) :  Coefficient used in the response of relative growth rate of NO3 denitrifiers to pH       {OK_STOMATE }
1618FPH_NO3_1 =  0.5
1619
1620# FPH_NO_0 ([-]  ) :  Coefficient used in the response of relative growth rate of NO denitrifiers to pH         {OK_STOMATE }
1621FPH_NO_0 =  5.25
1622
1623# FPH_NO_1 ([-]  ) :  Coefficient used in the response of relative growth rate of NO denitrifiers to pH         {OK_STOMATE }
1624FPH_NO_1 =  1.
1625
1626# FPH_N2O_0 ([-]  ) :  Coefficient used in the response of relative growth rate of N2O denitrifiers to pH       {OK_STOMATE }
1627FPH_N2O_0 =  6.25
1628
1629# FPH_N2O_1 ([-]  ) :  Coefficient used in the response of relative growth rate of N2O denitrifiers to pH       {OK_STOMATE }
1630FPH_N2O_1 =  1.5
1631
1632# KN ([kgN/m**3]  ) :  Half Saturation of N oxydes      {OK_STOMATE }
1633KN =  0.083
1634
1635# MU_NO3_MAX ([hour**-1]  ) :  Maximum Relative growth rate of NO3 denitrifiers         {OK_STOMATE }
1636MU_NO3_MAX =  0.67
1637
1638# MU_NO_MAX ([hour**-1]  ) :  Maximum Relative growth rate of NO denitrifiers   {OK_STOMATE }
1639MU_NO_MAX =  0.34
1640
1641# MU_N2O_MAX ([hour**-1]  ) :  Maximum Relative growth rate of N2O denitrifiers         {OK_STOMATE }
1642MU_N2O_MAX =  0.34
1643
1644# Y_NO3 ([kgC / kgN]  ) :  Maximum growth yield of NO3 denitrifiers on N oxydes         {OK_STOMATE }
1645Y_NO3 =  0.401
1646
1647# Y_NO ([kgC / kgN]  ) :  Maximum growth yield of NO denitrifiers on N oxydes   {OK_STOMATE }
1648Y_NO =  0.428
1649
1650# Y_N2O ([kgC / kgN]  ) :  Maximum growth yield of N2O denitrifiers on N oxydes         {OK_STOMATE }
1651Y_N2O =  0.151
1652
1653# M_NO3 ([kgN / kgC / hour]  ) :  Maintenance coefficient on NO3        {OK_STOMATE }
1654M_NO3 =  0.09
1655
1656# M_NO ([kgN / kgC / hour]  ) :  Maintenance coefficient on NO  {OK_STOMATE }
1657M_NO =  0.035
1658
1659# M_N2O ([kgN / kgC / hour]  ) :  Maintenance coefficient on N2O        {OK_STOMATE }
1660M_N2O =  0.079
1661
1662# MAINT_C ([kgC / kgC / hour]  ) :  Maintenance coefficient of carbon   {OK_STOMATE }
1663MAINT_C =  0.0076
1664
1665# YC ([kgC / kgC ]  ) :  Maximum growth yield on soluble carbon         {OK_STOMATE }
1666YC =  0.503
1667
1668# F_CLAY_0 ([-]  ) :  Coefficient used in the eq. defining the response of N-emission to clay fraction  {OK_STOMATE }
1669F_CLAY_0 =  0.13
1670
1671# F_CLAY_1 ([-]  ) :  Coefficient used in the eq. defining the response of N-emission to clay fraction  {OK_STOMATE }
1672F_CLAY_1 =  -0.079
1673
1674# RATIO_NH4_FERT ([-]  ) :  Proportion of ammonium in the fertilizers (ammo-nitrate)    {OK_STOMATE }
1675RATIO_NH4_FERT =  0.875
1676
1677# CN_RATIO_MANURE ([-]  ) :  C:N ratio of organic fertilizers coming from Fuchs,et al,  {OK_STOMATE }
1678CN_RATIO_MANURE =  13.7
1679
1680# VMAX_UPTAKE ([umol (g DryWeight_root)-1 h-1)]  ) :  Vmax of nitrogen uptake by plants for Ammonium (ind.1) and Nitrate (ind.2)        {OK_STOMATE }
1681VMAX_UPTAKE =  3. 3.
1682
1683# K_N_MIN ([umol per litter]  ) :  [NH4+] and [NO3-] for which the Nuptake equals vmax/2.       {OK_STOMATE }
1684K_N_MIN =  30. 30.
1685
1686# LOW_K_N_MIN ([umol**-1]  ) :  Rate of N uptake not associated with Michaelis- Menten Kinetics for Ammonium    {OK_STOMATE }
1687LOW_K_N_MIN =  0.0002 0.0002
1688
1689# EMM_FAC ([-]  ) :  Factor for reducing NH3 emission           {OK_NCYCLE}
1690EMM_FAC =  0.2
1691
1692# FACT_KN_NO ([-]  ) :  Factor for adusting kn constant for NOx production      {OK_NCYCLE}
1693FACT_KN_NO =  0.012
1694
1695# FACT_KN_N2O ([-]  ) :  Factor for adusting kn constant for N2O production     {OK_NCYCLE}
1696FACT_KN_N2O =  0.04
1697
1698# KFWDENIT ([-]) :  Factor for adjusting sensitivity of denitrification to water content        {OK_NCYCLE}
1699KFWDENIT =  -5.
1700
1701# FWDENITFC ([-]) :  Value at field capacity of the sensitivity function of denitrification to water content    {OK_NCYCLE}
1702FWDENITFC =  0.05
1703
1704# FRACN_DRAINAGE ([-]  ) :  Fraction of NH3/NO3 loss by drainage        {OK_NCYCLE}
1705FRACN_DRAINAGE =  1.0
1706
1707# FRACN_RUNOFF ([-]  ) :  Fraction of NH3/NO3 loss by runoff    {OK_NCYCLE}
1708FRACN_RUNOFF =  0.3
1709
1710# LEAF_N_DMAX (???) :  ?????????????    {OK_STOMATE }
1711LEAF_N_DMAX =  0.25
1712
1713# NCIRC ([-]) :  Number of basal area classes in allocation scheme      {OK_STOMATE, functional allocation }
1714NCIRC =  2 
1715
1716# SYNC_THRESHOLD ([-]  ) :  The threshold value for a warning when we sync biomass      {OK_STOMATE, functional allocation }
1717SYNC_THRESHOLD =  0.1 
1718
1719# TEST_GRID ([-]) :  grid cell for which extra output is written to the out_execution file      {OK_STOMATE}
1720TEST_GRID =  1
1721
1722# TEST_PFT ([-]   ) :  pft for which extra output is written to the out_execution file  {OK_STOMATE}
1723TEST_PFT =  6
1724
1725# LD_ALLOC ([-]   ) :  A flag to turn of debug statement        {}
1726LD_ALLOC =  6
1727
1728# MAX_DELTA_KF ([m]  ) :  Maximum change in KF from one time step to another    {OK_STOMATE, functional allocation }
1729MAX_DELTA_KF =  0.1 
1730
1731# MAINT_FROM_GPP ([-]  ) :  Some carbon needs to remain to support the growth, hence,   {OK_STOMATE, functional allocation }
1732MAINT_FROM_GPP =  0.8
1733
1734# NEW_TURNOVER_TIME_REF ([days]  ) :    {OK_STOMATE }
1735NEW_TURNOVER_TIME_REF =  20. 
1736
1737# LEAF_AGE_CRIT_TREF ([days]  ) :       {OK_STOMATE }
1738LEAF_AGE_CRIT_TREF =  20. 
1739
1740# LEAF_AGE_CRIT_COEFF  ([-] ) :         {OK_STOMATE }
1741LEAF_AGE_CRIT_COEFF  =  1.5, 0.75, 10. 
1742
1743# VMAX_OFFSET  ([-]  ) :  offset (minimum relative vcmax)       {OK_STOMATE }
1744VMAX_OFFSET  =  0.3
1745
1746# LEAFAGE_FIRSTMAX ([-] ) :  leaf age at which vmax attains vcmax_opt (in fraction of critical leaf age)        {OK_STOMATE }
1747LEAFAGE_FIRSTMAX =  0.03 
1748
1749# LEAFAGE_LASTMAX  ([-]  ) :  leaf age at which vmax falls below vcmax_opt (in fraction of critical leaf age)   {OK_STOMATE }
1750LEAFAGE_LASTMAX  =  0.5 
1751
1752# LEAFAGE_OLD  ([-]  ) :  leaf age at which vmax attains its minimum (in fraction of critical leaf age)         {OK_STOMATE }
1753LEAFAGE_OLD  =  1.
1754
1755# SUGAR_LOAD_MIN () :  Lower bound for sugar loading when used to regulate NUE  {OK_STOMATE}
1756SUGAR_LOAD_MIN =  0.0
1757
1758# SUGAR_LOAD_MAX () :  Upper bound for sugar loading when used to regulate NUE  {OK_STOMATE}
1759SUGAR_LOAD_MAX =  1.0
1760
1761# GPPFRAC_DORMANCE  ([-]) :  rapport maximal GPP/GGP_max pour dormance  {OK_STOMATE }
1762GPPFRAC_DORMANCE  =  0.2 
1763
1764# TAU_CLIMATOLOGY ([days]) :  tau for "climatologic variables   {OK_STOMATE }
1765TAU_CLIMATOLOGY =  20
1766
1767# HVC1  ([-]  ) :  parameters for herbivore activity    {OK_STOMATE }
1768HVC1  =  0.019
1769
1770# HVC2  ([-]  ) :  parameters for herbivore activity    {OK_STOMATE }
1771HVC2  =  1.38
1772
1773# LEAF_FRAC_HVC ([-] ) :  parameters for herbivore activity     {OK_STOMATE }
1774LEAF_FRAC_HVC =  0.33
1775
1776# TLONG_REF_MAX ([K]  ) :  maximum reference long term temperature      {OK_STOMATE }
1777TLONG_REF_MAX =  303.1
1778
1779# TLONG_REF_MIN  ([K]  ) :  minimum reference long term temperature     {OK_STOMATE }
1780TLONG_REF_MIN  =  253.1
1781
1782# NCD_MAX_YEAR ([days]) :       {OK_STOMATE }
1783NCD_MAX_YEAR =  3. 
1784
1785# GDD_THRESHOLD  ([days] ) :    {OK_STOMATE }
1786GDD_THRESHOLD  =  5. 
1787
1788# GREEN_AGE_EVER  ([-]  ) :     {OK_STOMATE }
1789GREEN_AGE_EVER  =  2. 
1790
1791# GREEN_AGE_DEC ([-] ) :        {OK_STOMATE }
1792GREEN_AGE_DEC =  0.5 
1793
1794# ESTAB_MAX_TREE ([-]   ) :  Maximum tree establishment rate    {OK_DGVM}
1795ESTAB_MAX_TREE =  0.12 
1796
1797# ESTAB_MAX_GRASS ([-]  ) :  Maximum grass establishment rate   {OK_DGVM}
1798ESTAB_MAX_GRASS =  0.12 
1799
1800# ESTABLISH_SCAL_FACT ([-] ) :          {OK_DGVM }
1801ESTABLISH_SCAL_FACT =  5.
1802
1803# MAX_TREE_COVERAGE  ([-] ) :           {OK_DGVM }
1804MAX_TREE_COVERAGE  =  0.98
1805
1806# IND_0_ESTAB ([-]  ) :         {OK_DGVM }
1807IND_0_ESTAB =  0.2
1808
1809# ANNUAL_INCREASE ([FLAG]) :  for diagnosis of fpc increase, compare today's fpc to last year's maximum (T) or to fpc of last time step (F)?    {OK_DGVM}
1810ANNUAL_INCREASE =  y
1811
1812# MIN_COVER  ([-]  ) :  For trees, minimum fraction of crown area occupied      {OK_DGVM}
1813MIN_COVER  =  0.05 
1814
1815# IND_0  ([-]  ) :  initial density of individuals      {OK_DGVM}
1816IND_0  =  0.02 
1817
1818# MIN_AVAIL ([-]  ) :  minimum availability     {OK_DGVM}
1819MIN_AVAIL =  0.01
1820
1821# RIP_TIME_MIN ([year]  ) :     {OK_DGVM}
1822RIP_TIME_MIN =  1.25 
1823
1824# NPP_LONGTERM_INIT ([gC/m^2/year]) :           {OK_DGVM}
1825NPP_LONGTERM_INIT =  10.
1826
1827# EVERYWHERE_INIT ([-] ) :      {OK_DGVM}
1828EVERYWHERE_INIT =  0.05 
1829
1830# PRINTLEV ([0, 1, 2, 3, 4]) :  Print level for text output     {}
1831PRINTLEV =  2
1832
1833# PRINTLEV_modname ([0, 1, 2, 3, 4]) :  Specific print level of text output for the module "modname". Default as PRINTLEV.      {}
1834PRINTLEV_modname =  PRINTLEV
1835
1836# DRY_SOIL_HEAT_CAPACITY ([J.m^{-3}.K^{-1}] ) :  Dry soil Heat capacity of soils        {OK_SECHIBA }
1837DRY_SOIL_HEAT_CAPACITY =  1.80e+6
1838
1839# DRY_SOIL_HEAT_COND ([W.m^{-2}.K^{-1}] ) :  Dry soil Thermal Conductivity of soils     {OK_SECHIBA}
1840DRY_SOIL_HEAT_COND =  0.40 
1841
1842# SNOW_HEAT_COND ([W.m^{-2}.K^{-1}]) :  Thermal Conductivity of snow    {OK_SECHIBA  }
1843SNOW_HEAT_COND =  0.3
1844
1845# SNOW_DENSITY ([-] ) :  Snow density for the soil thermodynamics       {OK_SECHIBA }
1846SNOW_DENSITY =  330.0
1847
1848# NOBIO_WATER_CAPAC_VOLUMETRI ([s/m^2]) :       {}
1849NOBIO_WATER_CAPAC_VOLUMETRI =  150.
1850
1851# SECHIBA_QSINT  ([m]) :  Interception reservoir coefficient    {OK_SECHIBA }
1852SECHIBA_QSINT  =  0.02
1853
1854# OK_FREEZE ([FLAG]) :  Activate the complet soil freezing scheme       {OK_SECHIBA }
1855OK_FREEZE =  TRUE
1856
1857# READ_REFTEMP ([FLAG]) :  Initialize soil temperature using climatological temperature         {}
1858READ_REFTEMP =  True/False depening on OK_FREEZE
1859
1860# OK_FREEZE_THERMIX ([FLAG]) :  Activate thermal part of the soil freezing scheme       {}
1861OK_FREEZE_THERMIX =  True if OK_FREEZE else false
1862
1863# OK_ECORR ([FLAG]) :  Energy correction for freezing   {OK_FREEZE_THERMIX}
1864OK_ECORR =  True if OK_FREEZE else false
1865
1866# OK_FREEZE_THAW_LATENT_HEAT ([FLAG]) :  Activate latent heat part of the soil freezing scheme  {}
1867OK_FREEZE_THAW_LATENT_HEAT =  FALSE 
1868
1869# fr_dT ([K] ) :  Freezing window       {OK_SECHIBA}
1870fr_dT =  2.0
1871
1872# SOILC_MAX ([gC/m3] ) :  Soil carbon above which soil thermal properties equals to organic soil properties     {OK_SOIL_CARBON_DISCRETIZATION and USE_SOILC_TEMPDIFF}
1873SOILC_MAX =  130000
1874
1875# OK_FREEZE_CWRR ([FLAG]) :  CWRR freezing scheme by I. Gouttevin       {}
1876OK_FREEZE_CWRR =  True if OK_FREEZE else false
1877
1878# OK_THERMODYNAMICAL_FREEZING ([FLAG]) :  Calculate frozen fraction thermodynamically   {OK_FREEZE_CWRR}
1879OK_THERMODYNAMICAL_FREEZING =  True
1880
1881# CHECK_CWRR ([FLAG]) :  Calculate diagnostics to check CWRR water balance      {}
1882CHECK_CWRR =  n
1883
1884# SECHIBA_ZCANOP ([m]) :  Soil level used for canopy development (if STOMATE disactivated)      {OK_SECHIBA and .NOT. OK_STOMATE  }
1885SECHIBA_ZCANOP =  0.5
1886
1887# SECHIBA_QSINT  ([m]) :  Interception reservoir coefficient    {OK_SECHIBA }
1888SECHIBA_QSINT  =  0.02
1889
1890# SECHIBA_VEGMAX ([-]) :  Maximum vegetation distribution within the mesh (0-dim mode)  {IMPOSE_VEG}
1891SECHIBA_VEGMAX =  0.2, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.8, 0.0, 0.0, 0.0
1892
1893# SECHIBA_FRAC_NOBIO ([-]) :  Fraction of other surface types within the mesh (0-dim mode)      {IMPOSE_VEG}
1894SECHIBA_FRAC_NOBIO =  0.0
1895
1896# SECHIBA_LAI ([-]) :  LAI for all vegetation types (0-dim mode)        {IMPOSE_VEG}
1897SECHIBA_LAI =  0., 8., 8., 4., 4.5, 4.5, 4., 4.5, 4., 2., 2., 2., 2.
1898
1899# SOIL_FRACTIONS ([-]) :  Fraction of the 3 soil types (0-dim mode)     {IMPOSE_VEG and IMPOSE_SOILT}
1900SOIL_FRACTIONS =  -9999._sechiba
1901
1902# CLAY_FRACTION ([-] ) :  Fraction of the clay fraction (0-dim mode)    {IMPOSE_VEG and IMPOSE_SOIL}
1903CLAY_FRACTION =  0.2
1904
1905# SAND_FRACTION ([-] ) :  Fraction of the clay fraction (0-dim mode)    {IMPOSE_VEG and IMPOSE_SOIL}
1906SAND_FRACTION =  0.4
1907
1908# BULK  ([-] ) :  Bulk density (0-dim mode)     {IMPOSE_VEG and IMPOSE_SOIL}
1909BULK  =  XXX
1910
1911# SOIL_PH ([-] ) :  Soil pH (0-dim mode)        {IMPOSE_VEG and IMPOSE_SOIL}
1912SOIL_PH =  XXX
1913
1914# REINF_SLOPE ([-]) :  Slope coef for reinfiltration    {IMPOSE_VEG}
1915REINF_SLOPE =  0.1
1916
1917# SLOWPROC_HEIGHT ([m]) :  Height for all vegetation types      {OK_SECHIBA}
1918SLOWPROC_HEIGHT =  0., 30., 30., 20., 20., 20., 15., 15., 15., .5, .6, 1.0, 1.0
1919
1920# GET_SLOPE ([FLAG]) :  Read slopes from file and do the interpolation  {}
1921GET_SLOPE =  n
1922
1923# NINPUT_UPDATE ([years]) :  Update N input frequency   {ok_ncycle .AND. (.NOT. impose_cn) .AND. .NOT. impsoilt}
1924NINPUT_UPDATE =  0Y
1925
1926# NAMMONIUM ([gN m-2 d-1] ) :  Amount of N ammonium deposition          {ok_ncycle .AND. (.NOT. impose_cn)}
1927NAMMONIUM =  0
1928
1929# NNITRATE ([gN m-2 d-1] ) :  Amount of N nitrate deposition    {ok_ncycle .AND. (.NOT. impose_cn)}
1930NNITRATE =  0
1931
1932# NFERT ([gN m-2 d-1] ) :  Amount of N fertiliser       {ok_ncycle .AND. (.NOT. impose_cn)}
1933NFERT =  0
1934
1935# NMANURE ([gN m-2 d-1] ) :  Amount of N manure         {ok_ncycle .AND. (.NOT. impose_cn)}
1936NMANURE =  0
1937
1938# NBNF ([gN m-2 d-1] ) :  Amount of N biological fixation       {ok_ncycle .AND. (.NOT. impose_cn)}
1939NBNF =  0
1940
1941# LAI_FILE ([FILE]) :  Name of file from which the vegetation map is to be read         {LAI_MAP}
1942LAI_FILE =  lai2D.nc
1943
1944# RENORM_LAI ([FLAG]) :  flag to force LAI renormelization      {LAI_MAP}
1945RENORM_LAI =  n
1946
1947# VEGETATION_FILE ([FILE]) :  Name of file from which the vegetation map is to be read  {}
1948VEGETATION_FILE =  PFTmap.nc
1949
1950# CNLEAF_FILE ([FILE]) :  Name of file from which the cn leaf ratio is to be read       {}
1951CNLEAF_FILE =  cnleaf_map.nc
1952
1953# CNLEAF_VAR ([VAR]) :  Name of the variable in the file from which the cn leaf ratio is to be read     {}
1954CNLEAF_VAR =  leaf_cn.nc
1955
1956# SOILCLASS_FILE ([FILE]) :  Name of file from which soil types are read        {NOT(IMPOSE_VEG)}
1957SOILCLASS_FILE =  soils_param.nc
1958
1959# SOIL_BULK_FILE ([FILE]) :  Name of file from which soil bulk should be read   {}
1960SOIL_BULK_FILE =  soil_bulk_and_ph.nc
1961
1962# SOIL_PH_FILE ([FILE]) :  Name of file from which soil ph should be read       {}
1963SOIL_PH_FILE =  soil_bulk_and_ph.nc
1964
1965# SLOPE_NOREINF ([-]) :  See slope_noreinf above        {}
1966SLOPE_NOREINF =  0.5
1967
1968# TOPOGRAPHY_FILE ([FILE]) :  Name of file from which the topography map is to be read  {}
1969TOPOGRAPHY_FILE =  cartepente2d_15min.nc
1970
1971# NINPUT File ([FILE]) :  Name of file from which the N-input map is to be read         {}
1972NINPUT File =  'Ninput_fied'.nc
1973
1974# NINPUT var ([FILE]) :  Name of the variable in the file from which the N-input map is to be read      {}
1975NINPUT var =  'Ninput_fied'
1976
1977# WOODHARVEST_FILE ([FILE]) :  Name of file from which the wood harvest will be read    {DO_WOOD_HARVEST}
1978WOODHARVEST_FILE =  woodharvest.nc
1979
1980# SOILALB_FILE ([FILE]) :  Name of file from which the bare soil albedo         {NOT(IMPOSE_AZE)}
1981SOILALB_FILE =  soils_param.nc
1982
1983# ALB_BG_FILE ([FILE]) :  Name of file from which the background albedo is read         {ALB_BG_MODIS}
1984ALB_BG_FILE =  alb_bg.nc
1985
1986# CDRAG_FROM_GCM ([FLAG]) :  Keep cdrag coefficient from gcm.   {OK_SECHIBA}
1987CDRAG_FROM_GCM =  y
1988
1989# N_FERTIL_FILE (- ) :  File name       {CHEMISTRY_BVOC and NOx_FERTILIZERS_USE}
1990N_FERTIL_FILE =  orchidee_fertilizer_1995.nc
1991
1992# N_FERTIL_FILE (-) :  File name        {CHEMISTRY_BVOC and NOx_FERTILIZERS_USE}
1993N_FERTIL_FILE =  orchidee_fertilizer_1995.nc
1994
1995# ENERBIL_TSURF (Kelvin [K]) :  Initial temperature if not found in restart     {OK_SECHIBA}
1996ENERBIL_TSURF =  280.
1997
1998# ENERBIL_EVAPOT () :  Initial Soil Potential Evaporation       {OK_SECHIBA       }
1999ENERBIL_EVAPOT =  0.0
2000
2001# BEDROCK_FLAG ([FLAG]) :  Flag to consider bedrock at deeper layers.   {}
2002BEDROCK_FLAG =  0
2003
2004# USE_SOILC_TEMPDIFF ([FLAG]) :  insolation effect of the organic top soil layer        {OK_SOIL_CARBON_DISCRETIZATION }
2005USE_SOILC_TEMPDIFF =  FALSE
2006
2007# USE_REFSOC ([FLAG]) :  Read a SOC map to perform the insolation effect        {USE_SOILC_TEMPDIFF }
2008USE_REFSOC =  TRUE
2009
2010# USE_SOILC_METHOD ([FLAG]) :  Flag to control the way to average thermal conductivity of mineral soil and organic soil         {OK_SOIL_CARBON_DISCRETIZATION}
2011USE_SOILC_METHOD =  1
2012
2013# SNOW_COND_METHOD ([1=original method, 2=method by Decharme et al 2016]) :  Flag to choose the way to calculate snow thermal conductivity      {OK_SOIL_CARBON_DISCRETIZATION}
2014SNOW_COND_METHOD =  1
2015
2016# THERMOSOIL_TPRO (Kelvin [K]) :  Initial soil temperature profile if not found in restart      {OK_SECHIBA}
2017THERMOSOIL_TPRO =  280.
2018
2019# SOIL_REFTEMP_FILE ([FILE]) :  File with climatological soil temperature       {READ_REFTEMP}
2020SOIL_REFTEMP_FILE =  reftemp.nc
2021
2022# SOIL_REFSOC_FILE ([FILE]) :  File with soil carbon stocks     {OK_SOIL_CARBON_DISCRETIZATION, USE_REFSOC, SOIL_CTEMPDIFF}
2023SOIL_REFSOC_FILE =  refSOC.nc
2024
2025# DO_PONDS ([FLAG]) :  Should we include ponds          {}
2026DO_PONDS =  n
2027
2028# FROZ_FRAC_CORR  ([-]) :  Coefficient for the frozen fraction correction       {OK_FREEZE}
2029FROZ_FRAC_CORR  =  1.0
2030
2031# MAX_FROZ_HYDRO ([-]) :  Coefficient for the frozen fraction correction        {OK_FREEZE}
2032MAX_FROZ_HYDRO =  1.0
2033
2034# SMTOT_CORR ([-]) :  Coefficient for the frozen fraction correction    {OK_FREEZE}
2035SMTOT_CORR =  2.0
2036
2037# DO_RSOIL ([FLAG]) :  Should we reduce soil evaporation with a soil resistance         {}
2038DO_RSOIL =  n
2039
2040# OK_DYNROOT ([FLAG]) :  Calculate dynamic root profile to optimize soil moisture usage         {}
2041OK_DYNROOT =  n
2042
2043# CWRR_N_VANGENUCHTEN ([-]) :  Van genuchten coefficient n      {}
2044CWRR_N_VANGENUCHTEN =  1.89, 1.56, 1.31
2045
2046# CWRR_A_VANGENUCHTEN ([1/mm]  ) :  Van genuchten coefficient a         {}
2047CWRR_A_VANGENUCHTEN =  0.0075, 0.0036, 0.0019
2048
2049# VWC_RESIDUAL ([m3/m3]  ) :  Residual soil water content       {}
2050VWC_RESIDUAL =  0.065, 0.078, 0.095
2051
2052# VWC_SAT ([m3/m3]  ) :  Saturated soil water content   {}
2053VWC_SAT =  0.41, 0.43, 0.41
2054
2055# CWRR_KS  ([mm/d]   ) :  Hydraulic conductivity Saturation     {}
2056CWRR_KS  =  1060.8, 249.6, 62.4
2057
2058# WETNESS_TRANSPIR_MAX ([-]    ) :  Soil moisture above which transpir is max   {}
2059WETNESS_TRANSPIR_MAX =  0.5, 0.5, 0.5
2060
2061# VWC_FC  ([m3/m3]   ) :  Volumetric water content field capacity       {}
2062VWC_FC  =  0.32, 0.32, 0.32
2063
2064# VWC_WP ([m3/m3]   ) :  Volumetric water content Wilting pt    {}
2065VWC_WP =  0.10, 0.10, 0.10 
2066
2067# VWC_MIN_FOR_WET_ALB ([m3/m3]  ) :  Vol. wat. cont. above which albedo is cst  {}
2068VWC_MIN_FOR_WET_ALB =  0.25, 0.25, 0.25
2069
2070# VWC_MAX_FOR_DRY_ALB ([m3/m3]   ) :  Vol. wat. cont. below which albedo is cst         {}
2071VWC_MAX_FOR_DRY_ALB =  0.1, 0.1, 0.1
2072
2073# HYDROL_MOISTURE_CONTENT ([m3/m3]) :  Soil moisture on each soil tile and levels       {}
2074HYDROL_MOISTURE_CONTENT =  0.3
2075
2076# US_INIT ([-]) :  US_NVM_NSTM_NSLM     {}
2077US_INIT =  0.0
2078
2079# ZWT_FORCE ([m]) :  Prescribed water depth, dimension nstm     {}
2080ZWT_FORCE =  -9999. -9999. -9999.
2081
2082# FREE_DRAIN_COEF ([-]) :  Coefficient for free drainage at bottom, dimension nstm      {}
2083FREE_DRAIN_COEF =  1.0 1.0 1.0
2084
2085# WATER_TO_INFILT ([mm]) :  Water to be infiltrated on top of the soil  {}
2086WATER_TO_INFILT =  0.0
2087
2088# EVAPNU_SOIL ([mm]) :  Bare soil evap on each soil if not found in restart     {}
2089EVAPNU_SOIL =  0.0
2090
2091# HYDROL_SNOW () :  Initial snow mass if not found in restart   {OK_SECHIBA}
2092HYDROL_SNOW =  0.0
2093
2094# HYDROL_SNOWAGE (***) :  Initial snow age if not found in restart      {OK_SECHIBA}
2095HYDROL_SNOWAGE =  0.0
2096
2097# HYDROL_SNOW_NOBIO ([mm]) :  Initial snow amount on ice, lakes, etc. if not found in restart   {OK_SECHIBA}
2098HYDROL_SNOW_NOBIO =  0.0
2099
2100# HYDROL_SNOW_NOBIO_AGE (***) :  Initial snow age on ice, lakes, etc. if not found in restart   {OK_SECHIBA}
2101HYDROL_SNOW_NOBIO_AGE =  0.0
2102
2103# HYDROL_QSV ([mm]) :  Initial water on canopy if not found in restart  {OK_SECHIBA}
2104HYDROL_QSV =  0.0
2105
2106# CWRR_NKS_N0  ([-]) :  fitted value for relation log((n-n0)/(n_ref-n0))        {}
2107CWRR_NKS_N0  =  0.0
2108
2109# CWRR_NKS_POWER ([-]) :  fitted value for relation log((n-n0)/(n_ref-n0))      {}
2110CWRR_NKS_POWER =  0.0
2111
2112# CWRR_AKS_A0  ([1/mm]) :  fitted value for relation log((a-a0)/(a_ref-a0))     {}
2113CWRR_AKS_A0  =  0.0
2114
2115# CWRR_AKS_POWER ([-]) :  fitted value for relation log((a-a0)/(a_ref-a0))      {}
2116CWRR_AKS_POWER =  0.0
2117
2118# KFACT_DECAY_RATE ([1/m]) :  Factor for Ks decay with depth    {}
2119KFACT_DECAY_RATE =  2.0
2120
2121# KFACT_STARTING_DEPTH ([m]) :  Depth for compacted value of Ks         {}
2122KFACT_STARTING_DEPTH =  0.3
2123
2124# KFACT_MAX ([-]) :  Maximum Factor for Ks increase due to vegetation   {}
2125KFACT_MAX =  10.0
2126
2127# DT_ROUTING  ([seconds]) :  Time step of the routing scheme    {RIVER_ROUTING}
2128DT_ROUTING  =  86400.
2129
2130# ROUTING_RIVERS ([-]) :  Number of rivers      {RIVER_ROUTING}
2131ROUTING_RIVERS =  50
2132
2133# DO_FLOODINFILT ([FLAG]) :  Should floodplains reinfiltrate into the soil      {RIVER_ROUTING}
2134DO_FLOODINFILT =  n
2135
2136# DO_SWAMPS ([FLAG]) :  Should we include swamp parameterization        {RIVER_ROUTING}
2137DO_SWAMPS =  n
2138
2139# DO_PONDS ([FLAG]) :  Should we include ponds          {RIVER_ROUTING}
2140DO_PONDS =  n
2141
2142# SLOW_TCST ([days]) :  Time constant for the slow reservoir    {RIVER_ROUTING }
2143SLOW_TCST =  25.0 
2144
2145# FAST_TCST ([days]) :  Time constant for the fast reservoir    {RIVER_ROUTING }
2146FAST_TCST =  3.0 
2147
2148# STREAM_TCST ([days]) :  Time constant for the stream reservoir        {RIVER_ROUTING}
2149STREAM_TCST =  0.24
2150
2151# FLOOD_TCST ([days]) :  Time constant for the flood reservoir          {RIVER_ROUTING}
2152FLOOD_TCST =  4.0
2153
2154# SWAMP_CST ([-]) :  Fraction of the river that flows back to swamps    {RIVER_ROUTING}
2155SWAMP_CST =  0.2
2156
2157# FLOOD_BETA ([-] ) :  Parameter to fix the shape of the floodplain     {RIVER_ROUTING}
2158FLOOD_BETA =  2.0
2159
2160# POND_BETAP ([-] ) :  Ratio of the basin surface intercepted by ponds and the maximum surface of ponds         {RIVER_ROUTING}
2161POND_BETAP =  0.5
2162
2163# FLOOD_CRI ([mm] ) :  Potential height for which all the basin is flooded      {DO_FLOODPLAINS or DO_PONDS}
2164FLOOD_CRI =  2000.
2165
2166# POND_CRI ([mm] ) :  Potential height for which all the basin is a pond        {DO_FLOODPLAINS or DO_PONDS}
2167POND_CRI =  2000.
2168
2169# MAX_LAKE_RESERVOIR ([kg/m2(routing area)] ) :  Maximum limit of water in lake_reservoir       {RIVER_ROUTING}
2170MAX_LAKE_RESERVOIR =  7000
2171
2172# RIVER_DESC ([FLAG]) :  Writes out a description of the rivers         {RIVER_ROUTING}
2173RIVER_DESC =  n
2174
2175# RIVER_DESC_FILE ([FILE]) :  Filename in which we write the description of the rivers. If suffix is ".nc" a netCDF file is created     {RIVER_DESC}
2176RIVER_DESC_FILE =  river_desc.nc
2177
2178# ROUTING_FILE ([FILE]) :  Name of file which contains the routing information  {RIVER_ROUTING}
2179ROUTING_FILE =  routing.nc
2180
2181# IRRIGATION_FILE ([FILE]) :  Name of file which contains the map of irrigated areas    {DO_IRRIGATION OR DO_FLOODPLAINS}
2182IRRIGATION_FILE =  floodplains.nc
2183
2184# EPS_CARBON ([%]   ) :  Allowed error on carbon stock  {SPINUP_ANALYTIC}
2185EPS_CARBON =  0.01
2186
2187# SPINUP_PERIOD ([years]   ) :  Period to calulcate equilibrium during spinup analytic  {SPINUP_ANALYTIC}
2188SPINUP_PERIOD =  -1
2189
2190# FORCESOIL_STEP_PER_YEAR ([days, months, year]) :  Number of time steps per year for carbon spinup.    {STOMATE_CFORCING_NAME and OK_STOMATE and OK_SOIL_CARBON_DISCRETIZATION}
2191FORCESOIL_STEP_PER_YEAR =  365 (366, ...)
2192
2193# FORCESOIL_NB_YEAR ([years]) :  Number of years saved for carbon spinup.       {STOMATE_CFORCING_NAME and OK_STOMATE}
2194FORCESOIL_NB_YEAR =  1
2195
2196# FROZEN_RESPIRATION_FUNC  ([1]) :  Method for soil decomposition function      {OK_SOIL_CARBON_DISCRETIZATION }
2197FROZEN_RESPIRATION_FUNC  =  1
2198
2199# STOMATE_DIAGPT ([-]) :  Index of grid point for online diagnostics    {OK_STOMATE}
2200STOMATE_DIAGPT =  1
2201
2202# XIOS_ORCHIDEE_OK ([FLAG]) :  Use XIOS for writing diagnostics file    {}
2203XIOS_ORCHIDEE_OK =  y 
2204
2205# XIOS_INTERPOLATION ([FLAG]) :  Actiave reading and intrepolation using XIOS   {XIOS_ORCHIDEE_OK}
2206XIOS_INTERPOLATION =  n
2207
2208# XIOS_REMAP_OUTPUT ([FLAG]) :  Actiave remaping of diagnostic output files to regular grid     {XIOS_ORCHIDEE_OK .AND. grid_type=unstructured}
2209XIOS_REMAP_OUTPUT =  True
2210
2211# DT_STOMATE ([seconds]) :  Time step of STOMATE and other slow processes       {OK_STOMATE}
2212DT_STOMATE =  86400.
2213
2214# organic_layer_thickness ([-]) :  The thickness of organic layer       {OK_SOIL_CARBON_DISCRETIZATION}
2215organic_layer_thickness =  0.0 
2216
2217# OK_METHANE ([flag]) :  Is Methanogenesis and -trophy taken into account?      {OK_SOIL_CARBON_DISCRETIZATION}
2218OK_METHANE =  n
2219
2220# HEAT_CO2_ACT ([J/Kg]) :  specific heat of soil organic matter oxidation for active carbon (J/kg carbon)       {OK_SOIL_CARBON_DISCRETIZATION}
2221HEAT_CO2_ACT =  40.0E6 
2222
2223# HEAT_CO2_SLO ([J/Kg]) :  specific heat of soil organic matter oxidation for slow      {OK_SOIL_CARBON_DISCRETIZATION}
2224HEAT_CO2_SLO =  30.0E6 
2225
2226# HEAT_CO2_PAS ([J/Kg]) :  specific heat of soil organic matter oxidation for   {OK_SOIL_CARBON_DISCRETIZATION}
2227HEAT_CO2_PAS =  10.0E6 
2228
2229# TAU_CH4_TROPH ([s]) :  time constant of methanetrophy         {OK_SOIL_CARBON_DISCRETIZATION}
2230TAU_CH4_TROPH =  432000 
2231
2232# TAU_CH4_GEN_RATIO ([-]) :  time constant of methanogenesis (ratio to that of oxic)    {OK_SOIL_CARBON_DISCRETIZATION}
2233TAU_CH4_GEN_RATIO =  9.0 
2234
2235# O2_SEUIL_MGEN ([g/m3]) :  oxygen concentration below which there is anoxy     {OK_SOIL_CARBON_DISCRETIZATION}
2236O2_SEUIL_MGEN =  3.0 
2237
2238# HEAT_CH4_GEN ([J/kgC]) :  specific heat of methanogenesis     {OK_SOIL_CARBON_DISCRETIZATION}
2239HEAT_CH4_GEN =  0 
2240
2241# HEAT_CH4_TROPH ([J/kgC]) :  specific heat of methanotrophy    {OK_SOIL_CARBON_DISCRETIZATION}
2242HEAT_CH4_TROPH =  0 
2243
2244# O2_LIMIT ([flag]) :  O2 limitation taken into account         {OK_SOIL_CARBON_DISCRETIZATION}
2245O2_LIMIT =  n
2246
2247# cryoturbate ([flag]) :  Do we allow for cyoturbation?         {OK_SOIL_CARBON_DISCRETIZATION}
2248cryoturbate =  y 
2249
2250# cryoturbation_diff_k_in ([m2/year]) :  diffusion constant for cryoturbation   {OK_SOIL_CARBON_DISCRETIZATION}
2251cryoturbation_diff_k_in =  0.001 
2252
2253# bioturbation_diff_k_in ([m2/year]) :  diffusion constant for bioturbation     {OK_SOIL_CARBON_DISCRETIZATION}
2254bioturbation_diff_k_in =  0.0
2255
2256# MG_useallCpools ([flag]) :  Do we allow all three C pools to feed methanogenesis?     {OK_SOIL_CARBON_DISCRETIZATION}
2257MG_useallCpools =  y 
2258
2259# max_shum_value ([-]) :  maximum saturation degree on the thermal axes         {OK_SOIL_CARBON_DISCRETIZATION}
2260max_shum_value =  1 
2261
2262# reset_yedoma_carbon ([flag]) :  Do we reset carbon concentrations for yedoma region?  {OK_SOIL_CARBON_DISCRETIZATION}
2263reset_yedoma_carbon =  n 
2264
2265# yedoma_map_filename ([]) :  The filename for yedoma map       {OK_SOIL_CARBON_DISCRETIZATION}
2266yedoma_map_filename =  yedoma_map.nc 
2267
2268# yedoma_depth ([m]) :  The depth for soil carbon in yedoma     {OK_SOIL_CARBON_DISCRETIZATION}
2269yedoma_depth =  20 
2270
2271# deepC_a_init ([]) :  Carbon concentration for active soil C pool in yedoma    {OK_SOIL_CARBON_DISCRETIZATION}
2272deepC_a_init =  1790.1   
2273
2274# deepC_s_init ([]) :  Carbon concentration for slow soil C pool in yedoma      {OK_SOIL_CARBON_DISCRETIZATION}
2275deepC_s_init =  14360.8
2276
2277# deepC_p_init ([]) :  Carbon concentration for passive soil C pool in yedoma   {OK_SOIL_CARBON_DISCRETIZATION}
2278deepC_p_init =  1436
2279
2280# newaltcalc ([flag]) :  calculate alt ?        {OK_SOIL_CARBON_DISCRETIZATION}
2281newaltcalc =  n
2282
2283# new_carbinput_intdepzlit ([flag]) :           {OK_SOIL_CARBON_DISCRETIZATION}
2284new_carbinput_intdepzlit =  n
2285
2286# correct_carboninput_vertprof ([flag]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2287correct_carboninput_vertprof =  n
2288
2289# use_new_cryoturbation ([flag]) :      {OK_SOIL_CARBON_DISCRETIZATION}
2290use_new_cryoturbation =  n
2291
2292# cryoturbation_method ([]) :           { OK_SOIL_CARBON_DISCRETIZATION }
2293cryoturbation_method =  1
2294
2295# max_cryoturb_alt ([]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2296max_cryoturb_alt =  1
2297
2298# min_cryoturb_alt ([]) :       {OK_SOIL_CARBON_DISCRETIZATION}
2299min_cryoturb_alt =  1
2300
2301# reset_fixed_cryoturbation_depth ([flag]) :    {OK_SOIL_CARBON_DISCRETIZATION}
2302reset_fixed_cryoturbation_depth =  n
2303
2304# use_fixed_cryoturbation_depth ([flag]) :      {OK_SOIL_CARBON_DISCRETIZATION}
2305use_fixed_cryoturbation_depth =  n
2306
2307# bioturbation_depth (m) :  maximum bioturbation depth          {OK_SOIL_CARBON_DISCRETIZATION}
2308bioturbation_depth =  2
2309
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