[70] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sébastien Denvil |
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[373] | 5 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[70] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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[619] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[70] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Vargas |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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[619] | 24 | #D- This ksh library if a layer under some usefull |
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[70] | 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[619] | 64 | # Host and user names |
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[217] | 65 | # $hostname ou hostname |
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[228] | 66 | typeset HOST=${HOST:=$( hostname )} |
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[70] | 67 | # $username ou whoami |
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[228] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[70] | 69 | # $hostname of the MASTER job |
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[77] | 70 | typeset -r MASTER=vargas |
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[70] | 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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[742] | 77 | # Submit command |
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| 78 | typeset SUBMIT=${SUBMIT:=llsubmit} |
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[70] | 79 | # rsync with path |
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| 80 | typeset -r RSYNC=/usr/local/bin/rsync |
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| 81 | # RSYNC_opt args to rsync |
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| 82 | typeset -r RSYNC_opt="-va" |
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[192] | 83 | # ie storage filesystem |
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[537] | 84 | typeset -r STOREHOST=gaya.idris.fr |
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[70] | 85 | typeset -r REMOTE_RSYNC=/u/rech/ces/rces452/RSYNC/bin/rsync |
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| 86 | |
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| 87 | #==================================================== |
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| 88 | # Host specific DIRECTORIES |
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| 89 | #==================================================== |
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| 90 | |
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| 91 | #==================================================== |
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| 92 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 93 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 94 | |
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| 95 | #==================================================== |
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| 96 | #- SUBMIT_DIR : submission dir |
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| 97 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LOADL_STEP_INITDIR}} |
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| 98 | |
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| 99 | #==================================================== |
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[725] | 100 | #- IN |
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| 101 | typeset -r R_IN=${R_IN:=/u/rech/psl/rpsl035/IGCM} |
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| 102 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/u/rech/psl/rpsl376} |
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| 103 | |
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| 104 | #==================================================== |
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[70] | 105 | #- ARCHIVE |
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[132] | 106 | typeset -r ARCHIVE=$( echo ${HOME} | sed -e "s/homegpfs/u/" ) |
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[70] | 107 | |
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| 108 | #==================================================== |
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[619] | 109 | #- Mirror libIGCM from vargas to ulam |
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[70] | 110 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 111 | |
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| 112 | #==================================================== |
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| 113 | #- libIGCM_POST |
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[109] | 114 | PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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[132] | 115 | typeset -r HOME_POST=$( echo ${HOME} | sed -e "s/homegpfs/home/" ) |
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[192] | 116 | typeset -r libIGCM_POST=${HOME_POST}/MIRROR/${PATHlibIGCM}/libIGCM |
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[70] | 117 | |
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| 118 | #==================================================== |
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| 119 | #- OUT |
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| 120 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 121 | |
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| 122 | #==================================================== |
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[619] | 123 | #- R_BUF Buffer to pack files |
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| 124 | typeset -r R_BUF=${WORKDIR}/IGCM_OUT |
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| 125 | |
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| 126 | #==================================================== |
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[70] | 127 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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| 128 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${TMPDIR}} |
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| 129 | |
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| 130 | #==================================================== |
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[156] | 131 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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[423] | 132 | typeset -r BIG_DIR=${BIG_DIR:=${WORKDIR}/REBUILD} |
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[156] | 133 | |
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| 134 | #==================================================== |
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[70] | 135 | #- HOST_MPIRUN_COMMAND |
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| 136 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time poe"} |
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| 137 | |
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| 138 | #==================================================== |
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| 139 | #- Max number of arguments passed to nco operator or demigration command |
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[619] | 140 | UNIX_MAX_LIMIT=120 |
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[70] | 141 | |
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[619] | 142 | #==================================================== |
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| 143 | #- Default number of MPI task for IPSL coupled model |
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| 144 | #- required for backward compatibility |
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| 145 | #- |
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| 146 | DEFAULT_NUM_PROC_OCE=5 |
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| 147 | DEFAULT_NUM_PROC_CPL=1 |
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[644] | 148 | [ X${BATCH_NUM_PROC_TOT} = X ] || (( DEFAULT_NUM_PROC_ATM = BATCH_NUM_PROC_TOT - DEFAULT_NUM_PROC_OCE - DEFAULT_NUM_PROC_CPL )) |
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[637] | 149 | DEFAULT_NUM_PROC_TOTAL=${BATCH_NUM_PROC_TOT} |
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[619] | 150 | |
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[70] | 151 | #D-#================================================== |
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[725] | 152 | #D-function IGCM_sys_ChangeArchive |
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| 153 | #D-* Purpose: Just a dummy call on this machine |
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| 154 | #D-* Examples: |
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| 155 | #D- |
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| 156 | function IGCM_sys_ChangeArchive { |
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| 157 | |
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| 158 | IGCM_debug_Print 1 " dummy function : IGCM_sys_ChangeArchive " |
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| 159 | |
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| 160 | } |
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| 161 | |
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| 162 | #D-#================================================== |
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[537] | 163 | #D-function IGCM_sys_RshMaster |
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| 164 | #D-* Purpose: Connection to frontend machine. |
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| 165 | #D-* Examples: |
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| 166 | #D- |
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| 167 | (( RshMNum = 0 )) |
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| 168 | function IGCM_sys_RshMaster { |
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[619] | 169 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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[537] | 170 | |
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[619] | 171 | typeset THEFILE OUTFILE ERR |
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[537] | 172 | |
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[619] | 173 | RshDIR=${WORKDIR}/RUN_DIR/${config_UserChoices_TagName}/${config_UserChoices_JobName}.${$} |
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| 174 | if [ ! -d ${RshDIR} ] ; then |
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| 175 | IGCM_sys_Mkdir ${RshDIR} |
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| 176 | fi |
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| 177 | THEFILE=${RshDIR}/file_sys_RshMaster_$$_${RshMNum} |
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| 178 | echo '#!/bin/ksh' > ${THEFILE} |
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| 179 | echo "export libIGCM=${libIGCM} > /dev/null 2>&1" >> ${THEFILE} |
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| 180 | echo "export DEBUG_debug=${DEBUG_debug} > /dev/null 2>&1" >> ${THEFILE} |
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| 181 | echo ". ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh > /dev/null 2>&1" >> ${THEFILE} |
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| 182 | echo ". ${libIGCM}/libIGCM_card/libIGCM_card.ksh > /dev/null 2>&1" >> ${THEFILE} |
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| 183 | echo "${@} " >> ${THEFILE} |
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[537] | 184 | |
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[634] | 185 | # No frontend queue on brodie : just rsh the job on the frontend with submission. |
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[619] | 186 | sed -e "s@IGCM_sys_Qsub\(.*\)@\1@" ${THEFILE} > ${THEFILE}_ |
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[537] | 187 | |
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[619] | 188 | chmod u+x ${THEFILE}_ |
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[537] | 189 | |
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[619] | 190 | OUTFILE=${RshDIR}/out_RshMaster.$$.${RshMNum} |
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| 191 | (( RshMNum = RshMNum + 1 )) |
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[537] | 192 | |
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[619] | 193 | rsh ${MASTER} 'bash -c "nohup '${THEFILE}'_ > '${OUTFILE}' 2>&1 &"' |
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| 194 | if [ $? -gt 0 ] ; then |
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| 195 | echo "IGCM_sys_RshMaster : erreur." |
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| 196 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 197 | fi |
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| 198 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[537] | 199 | } |
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| 200 | |
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| 201 | #D-#================================================== |
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[70] | 202 | #D-function IGCM_sys_RshArchive |
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| 203 | #D-* Purpose: Archive rsh command |
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| 204 | #D-* Examples: |
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| 205 | #D- |
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| 206 | function IGCM_sys_RshArchive { |
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[619] | 207 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 208 | rsh ${STOREHOST} exec /bin/ksh <<-EOF |
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[70] | 209 | ${@} |
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| 210 | EOF |
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[619] | 211 | if [ $? -gt 0 ] ; then |
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| 212 | echo "IGCM_sys_RshArchive : erreur." |
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| 213 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 214 | fi |
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| 215 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[70] | 216 | } |
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| 217 | |
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| 218 | #D-#================================================== |
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| 219 | #D-function IGCM_sys_RshPost |
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| 220 | #D-* Purpose: Post-process rsh command |
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| 221 | #D-* Examples: |
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| 222 | #D- |
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| 223 | function IGCM_sys_RshPost { |
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[619] | 224 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 225 | if ( $DEBUG_sys ) ; then |
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| 226 | echo "IGCM_sys_RshPost :" $@ |
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| 227 | fi |
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[479] | 228 | |
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[619] | 229 | # keep standard input to keep it for postpone if ulam don't answer |
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| 230 | cat >/tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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[479] | 231 | |
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[619] | 232 | ## Add submission for old postponed files only if command is a Qsub |
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| 233 | ## |
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| 234 | ISITQSUB=0 |
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| 235 | grep Qsub /tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} >/dev/null 2>&1 && ISITQSUB=1 |
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| 236 | if ( [ ${ISITQSUB} -gt 0 ] ) ; then |
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| 237 | if [ -d ${SUBMIT_DIR}/POSTPONE ] ; then |
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| 238 | for postponed_file in ${SUBMIT_DIR}/POSTPONE/* ; do |
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| 239 | if [ -f ${postponed_file} ] ; then |
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| 240 | IGCM_debug_Print 2 " submit postponed file : " ${postponed_file} |
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| 241 | rsh ulam exec /bin/ksh <${postponed_file} |
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| 242 | if [ $? -eq 0 ] ; then |
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| 243 | IGCM_sys_Rm ${postponed_file} |
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| 244 | else |
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| 245 | IGCM_debug_Print 2 "keep postponed file for an other submission :" ${postponed_file} |
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| 246 | fi |
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| 247 | fi |
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| 248 | done |
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[70] | 249 | fi |
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[619] | 250 | fi |
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[479] | 251 | |
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[619] | 252 | RETURN=0 |
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| 253 | # rsh ulam command |
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| 254 | rsh ulam exec /bin/ksh </tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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| 255 | RETURN=$? |
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[479] | 256 | |
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[619] | 257 | # keep standard input for postpone if ulam don't answer |
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| 258 | if ( [ ${RETURN} -gt 0 ] ) ; then |
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| 259 | IGCM_debug_Print 2 "Postpone tmp_IGCM_sys_RshPost_$$_${LOGNAME}" |
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| 260 | [ -d ${SUBMIT_DIR}/POSTPONE ] || mkdir ${SUBMIT_DIR}/POSTPONE |
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| 261 | mv /tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} ${SUBMIT_DIR}/POSTPONE |
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| 262 | else |
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| 263 | IGCM_sys_Rm /tmp/tmp_IGCM_sys_RshPost_$$_${LOGNAME} |
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| 264 | fi |
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| 265 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[70] | 266 | } |
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| 267 | |
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| 268 | #D-#================================================== |
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[153] | 269 | #D-function IGCM_sys_SendMail |
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| 270 | #D-* Purpose: Send mail when simulation is over |
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| 271 | #D-* Examples: |
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| 272 | #D- |
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| 273 | function IGCM_sys_SendMail { |
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[619] | 274 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 275 | if ( $DEBUG_sys ) ; then |
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| 276 | echo "IGCM_sys_SendMail :" $@ |
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| 277 | fi |
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[437] | 278 | |
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[619] | 279 | if ( ${ExitFlag} ) ; then |
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| 280 | status=failed |
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| 281 | else |
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| 282 | status=completed |
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| 283 | fi |
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| 284 | cat << END_MAIL > job_end.mail |
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[437] | 285 | Dear ${LOGIN}, |
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| 286 | |
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[453] | 287 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[153] | 288 | Job started : ${DateBegin} |
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| 289 | Job ended : ${DateEnd} |
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[434] | 290 | Output files are available in ${R_SAVE} |
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[453] | 291 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[153] | 292 | END_MAIL |
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| 293 | |
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[619] | 294 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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| 295 | mailx -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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| 296 | elif [ -f ~/.forward ] ; then |
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| 297 | mailx -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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| 298 | else |
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| 299 | mailx -s "${config_UserChoices_JobName} ${status}" ${USER} < job_end.mail |
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| 300 | fi |
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[153] | 301 | |
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[619] | 302 | if [ $? -gt 0 ] ; then |
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| 303 | echo "IGCM_sys_SendMail : erreur." |
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| 304 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 305 | fi |
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| 306 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[153] | 307 | } |
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| 308 | |
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| 309 | #D-#================================================== |
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[70] | 310 | #D-function IGCM_sys_Mkdir |
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| 311 | #D-* Purpose: Master locale mkdir command |
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| 312 | #D-* Examples: |
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| 313 | #D- |
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| 314 | function IGCM_sys_Mkdir { |
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[619] | 315 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 316 | if ( $DEBUG_sys ) ; then |
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| 317 | echo "IGCM_sys_Mkdir :" $@ |
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| 318 | fi |
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| 319 | if [ ! -d ${1} ]; then |
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| 320 | \mkdir -p $1 |
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| 321 | if [ $? -gt 0 ] ; then |
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| 322 | echo "IGCM_sys_Mkdir : erreur." |
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| 323 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[70] | 324 | fi |
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[619] | 325 | fi |
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[70] | 326 | # vérification : |
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[619] | 327 | if [ ! -d ${1} ] ; then |
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| 328 | echo "IGCM_sys_Mkdir : erreur." |
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| 329 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 330 | fi |
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| 331 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[70] | 332 | } |
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| 333 | |
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| 334 | #D-#================================================== |
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| 335 | #D-function IGCM_sys_MkdirArchive |
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| 336 | #D-* Purpose: Mkdir on Archive |
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| 337 | #D-* Examples: |
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| 338 | #D- |
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| 339 | function IGCM_sys_MkdirArchive { |
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[619] | 340 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 341 | if ( $DEBUG_sys ) ; then |
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| 342 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 343 | fi |
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| 344 | #- creation de repertoire sur le serveur fichier |
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| 345 | rsh ${STOREHOST} -n mkdir -p $1 |
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[70] | 346 | |
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[619] | 347 | if [ $? -gt 0 ] ; then |
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| 348 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 349 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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| 350 | fi |
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| 351 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[70] | 352 | } |
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| 353 | |
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| 354 | #D-#================================================== |
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| 355 | #D-function IGCM_sys_MkdirWork |
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| 356 | #D-* Purpose: Mkdir on Work |
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| 357 | #D-* Examples: |
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| 358 | #D- |
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| 359 | function IGCM_sys_MkdirWork { |
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[619] | 360 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 361 | if ( $DEBUG_sys ) ; then |
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| 362 | echo "IGCM_sys_MkdirWork :" $@ |
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| 363 | fi |
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| 364 | #- creation de repertoire sur le serveur fichier |
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| 365 | if [ ! -d ${1} ]; then |
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| 366 | \mkdir -p $1 |
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| 367 | if [ $? -gt 0 ] ; then |
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| 368 | echo "IGCM_sys_MkdirWork : erreur." |
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| 369 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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[70] | 370 | fi |
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[619] | 371 | fi |
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| 372 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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[70] | 373 | } |
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| 374 | |
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| 375 | #D-#================================================== |
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| 376 | #D-function IGCM_sys_Cd |
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| 377 | #D-* Purpose: master cd command |
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| 378 | #D-* Examples: |
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| 379 | #D- |
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| 380 | function IGCM_sys_Cd { |
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[619] | 381 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 382 | if ( $DEBUG_sys ) ; then |
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| 383 | echo "IGCM_sys_Cd :" $@ |
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| 384 | fi |
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| 385 | \cd $1 |
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| 386 | if [ $? -gt 0 ] ; then |
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| 387 | echo "IGCM_sys_Cd : erreur." |
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| 388 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 389 | fi |
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| 390 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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[70] | 391 | } |
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| 392 | |
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| 393 | #D-#================================================== |
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| 394 | #D-function IGCM_sys_Chmod |
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| 395 | #D-* Purpose: Chmod |
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| 396 | #D-* Examples: |
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| 397 | #D- |
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| 398 | function IGCM_sys_Chmod { |
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[619] | 399 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
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| 400 | if ( $DEBUG_sys ) ; then |
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| 401 | echo "IGCM_sys_Chmod :" $@ |
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| 402 | fi |
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| 403 | if [ $DRYRUN -le 1 ]; then |
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| 404 | \chmod $@ |
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| 405 | if [ $? -gt 0 ] ; then |
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| 406 | echo "IGCM_sys_Chmod : erreur." |
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| 407 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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[70] | 408 | fi |
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[619] | 409 | else |
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| 410 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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| 411 | fi |
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| 412 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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[70] | 413 | } |
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| 414 | |
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| 415 | #D-#================================================== |
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| 416 | #D-function IGCM_sys_FileSize |
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| 417 | #D-* Purpose: Filesize |
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| 418 | #D-* Examples: |
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| 419 | #D- |
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| 420 | function IGCM_sys_FileSize { |
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[619] | 421 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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[70] | 422 | |
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[619] | 423 | typeset sizeF |
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| 424 | set +A sizeF -- $( ls -la ${1} ) |
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| 425 | if [ $? -gt 0 ] ; then |
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| 426 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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| 427 | fi |
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| 428 | eval ${2}=${sizeF[4]} |
---|
[70] | 429 | |
---|
[619] | 430 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
[70] | 431 | } |
---|
| 432 | |
---|
| 433 | #D-#================================================== |
---|
| 434 | #D-function IGCM_sys_TestDir |
---|
| 435 | #D-* Purpose: Test Directory that must exists |
---|
| 436 | #D-* Examples: |
---|
| 437 | #D- |
---|
| 438 | function IGCM_sys_TestDir { |
---|
[619] | 439 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
| 440 | if ( $DEBUG_sys ) ; then |
---|
| 441 | echo "IGCM_sys_TestDir :" $@ |
---|
| 442 | fi |
---|
| 443 | typeset ExistFlag |
---|
| 444 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 445 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
[70] | 446 | |
---|
[619] | 447 | return ${ExistFlag} |
---|
[70] | 448 | } |
---|
| 449 | |
---|
| 450 | #D-#================================================== |
---|
| 451 | #D-function IGCM_sys_TestDirArchive |
---|
| 452 | #D-* Purpose: Test Directory that must exists on Archive |
---|
| 453 | #D-* Examples: |
---|
| 454 | #D- |
---|
| 455 | function IGCM_sys_TestDirArchive { |
---|
[619] | 456 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
| 457 | if ( $DEBUG_sys ) ; then |
---|
| 458 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
| 459 | fi |
---|
| 460 | typeset ExistFlag |
---|
| 461 | ExistFlag=$( IGCM_sys_RshArchive "[ -d $1 ] && echo 0 || echo 1" ) |
---|
| 462 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
[70] | 463 | |
---|
[619] | 464 | return ${ExistFlag} |
---|
[70] | 465 | } |
---|
| 466 | |
---|
| 467 | #D-#================================================== |
---|
[619] | 468 | #D-function IGCM_sys_IsFileArchived |
---|
| 469 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 470 | #D-* always true on vargas. |
---|
| 471 | #D-* Examples: |
---|
| 472 | #D- |
---|
| 473 | function IGCM_sys_IsFileArchived { |
---|
| 474 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
| 475 | if ( $DEBUG_sys ) ; then |
---|
| 476 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
| 477 | fi |
---|
| 478 | typeset IsArchivedFlag |
---|
| 479 | IsArchivedFlag=$( echo 0 ) |
---|
| 480 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
| 481 | |
---|
| 482 | return ${IsArchivedFlag} |
---|
| 483 | } |
---|
| 484 | |
---|
| 485 | #D-#================================================== |
---|
[70] | 486 | #D-function IGCM_sys_TestFileArchive |
---|
| 487 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 488 | #D-* Examples: |
---|
| 489 | #D- |
---|
| 490 | function IGCM_sys_TestFileArchive { |
---|
[619] | 491 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
| 492 | typeset ExistFlag |
---|
| 493 | ExistFlag=$( IGCM_sys_RshArchive "[ -f $1 ] && echo 0 || echo 1" ) |
---|
| 494 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
[70] | 495 | |
---|
[619] | 496 | return ${ExistFlag} |
---|
[70] | 497 | } |
---|
| 498 | |
---|
| 499 | #D-#================================================== |
---|
[619] | 500 | #D-function IGCM_sys_TestFileBuffer |
---|
| 501 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
| 502 | #D-* Examples: |
---|
| 503 | #D- |
---|
| 504 | function IGCM_sys_TestFileBuffer { |
---|
| 505 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
| 506 | typeset ExistFlag |
---|
| 507 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 508 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
| 509 | |
---|
| 510 | return ${ExistFlag} |
---|
| 511 | } |
---|
| 512 | |
---|
| 513 | #D-#================================================== |
---|
[70] | 514 | #D-function IGCM_sys_CountFileArchive |
---|
| 515 | #D-* Purpose: Count files on Archive filesystem |
---|
| 516 | #D-* Examples: |
---|
| 517 | #D- |
---|
| 518 | function IGCM_sys_CountFileArchive { |
---|
[619] | 519 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
| 520 | IGCM_sys_RshArchive "ls ${@} 2>/dev/null | wc -l" |
---|
| 521 | if [ $? -gt 0 ] ; then |
---|
| 522 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
| 523 | fi |
---|
| 524 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
[70] | 525 | } |
---|
| 526 | |
---|
| 527 | #D-#================================================== |
---|
[619] | 528 | #D-function IGCM_sys_CountFileBuffer |
---|
| 529 | #D-* Purpose: Count files on Scratch filesystem |
---|
| 530 | #D-* Examples: |
---|
| 531 | #D- |
---|
| 532 | function IGCM_sys_CountFileBuffer { |
---|
| 533 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
| 534 | ls ${@} 2>/dev/null | wc -l |
---|
| 535 | if [ $? -gt 0 ] ; then |
---|
| 536 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
| 537 | fi |
---|
| 538 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
| 539 | } |
---|
| 540 | |
---|
| 541 | #D-#================================================== |
---|
[70] | 542 | #D-function IGCM_sys_Tree |
---|
| 543 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 544 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 545 | #D- |
---|
| 546 | function IGCM_sys_Tree { |
---|
[619] | 547 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 548 | if ( $DEBUG_sys ) ; then |
---|
| 549 | echo "IGCM_sys_Tree :" $@ |
---|
| 550 | fi |
---|
[70] | 551 | |
---|
[619] | 552 | \mfls -r $@ |
---|
[70] | 553 | |
---|
[619] | 554 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[70] | 555 | } |
---|
| 556 | |
---|
| 557 | #D-#================================================== |
---|
| 558 | #D-function IGCM_sys_Tar |
---|
| 559 | #D-* Purpose: master un-tar command |
---|
| 560 | #D-* Examples: |
---|
| 561 | #D- |
---|
| 562 | function IGCM_sys_Tar { |
---|
[619] | 563 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 564 | if ( $DEBUG_sys ) ; then |
---|
| 565 | echo "IGCM_sys_Tar :" $@ |
---|
| 566 | fi |
---|
| 567 | \tar cf $@ |
---|
| 568 | if [ $? -gt 0 ] ; then |
---|
| 569 | echo "IGCM_sys_Tar : erreur." |
---|
| 570 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 571 | fi |
---|
| 572 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[70] | 573 | } |
---|
| 574 | |
---|
| 575 | #D-#================================================== |
---|
| 576 | #D-function IGCM_sys_UnTar |
---|
| 577 | #D-* Purpose: master un-tar command |
---|
| 578 | #D-* Examples: |
---|
| 579 | #D- |
---|
| 580 | function IGCM_sys_UnTar { |
---|
[619] | 581 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 582 | if ( $DEBUG_sys ) ; then |
---|
| 583 | echo "IGCM_sys_UnTar :" $@ |
---|
| 584 | fi |
---|
| 585 | \tar xvf $1 |
---|
| 586 | if [ $? -gt 0 ] ; then |
---|
| 587 | echo "IGCM_sys_UnTar : erreur." |
---|
| 588 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 589 | fi |
---|
| 590 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[70] | 591 | } |
---|
| 592 | |
---|
| 593 | #D-#================================================== |
---|
| 594 | #D-function IGCM_sys_Qsub |
---|
| 595 | #D-* Purpose: Qsub new job |
---|
| 596 | #D-* Examples: |
---|
| 597 | #D- |
---|
| 598 | function IGCM_sys_Qsub { |
---|
[619] | 599 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
[476] | 600 | |
---|
[619] | 601 | typeset ERROR |
---|
| 602 | ERROR=0 |
---|
| 603 | |
---|
| 604 | if ( $DEBUG_sys ) ; then |
---|
| 605 | echo "IGCM_sys_Qsub :" $@ |
---|
| 606 | fi |
---|
| 607 | # We have to change output/error file |
---|
| 608 | [ ${#@} = 1 ] && REP_FOR_JOB=$LOADL_STEP_INITDIR |
---|
| 609 | [ ${#@} = 2 ] && REP_FOR_JOB=$2 |
---|
| 610 | sed -e "s/\# \@ output *= .*/\# \@ output = ${Script_Output}/" -e "s/\# \@ error *= .*/\# \@ error = ${Script_Output}/" <$1 >${REP_FOR_JOB}/JOB_FOR_IGCM |
---|
| 611 | { |
---|
| 612 | [ ${#@} = 1 ] && ( cd $LOADL_STEP_INITDIR ; /usr/local/bin/llsubmit JOB_FOR_IGCM ; ERROR=$? ; cd - ; ) |
---|
| 613 | [ ${#@} = 2 ] && ( cd $2 ; /usr/local/bin/llsubmit JOB_FOR_IGCM ; ERROR=$? ; cd - ; ) |
---|
| 614 | } |
---|
| 615 | if [ ${ERROR} -gt 0 ] ; then |
---|
| 616 | echo "IGCM_sys_Qsub : erreur $@." |
---|
| 617 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 618 | fi |
---|
| 619 | IGCM_sys_Rm ${REP_FOR_JOB}/JOB_FOR_IGCM |
---|
| 620 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
| 621 | |
---|
[70] | 622 | } |
---|
| 623 | |
---|
| 624 | #D-#================================================== |
---|
| 625 | #D-function IGCM_sys_QsubPost |
---|
| 626 | #D-* Purpose: Qsub new job on scalaire |
---|
| 627 | #D-* Examples: |
---|
| 628 | #D- |
---|
| 629 | function IGCM_sys_QsubPost { |
---|
[619] | 630 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 631 | if ( $DEBUG_sys ) ; then |
---|
| 632 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 633 | fi |
---|
| 634 | cd ${POST_DIR} |
---|
| 635 | /opt/ibmll/LoadL/full/bin/llsubmit ${libIGCM_POST}/$1.job |
---|
| 636 | cd - |
---|
| 637 | if [ $? -gt 0 ] ; then |
---|
| 638 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 639 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 640 | fi |
---|
| 641 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[70] | 642 | } |
---|
| 643 | |
---|
| 644 | #D-************************* |
---|
[619] | 645 | #D- File transfer functions |
---|
[70] | 646 | #D-************************* |
---|
| 647 | #D- |
---|
| 648 | |
---|
| 649 | #D-#================================================== |
---|
| 650 | #D-function IGCM_sys_Rsync_out |
---|
| 651 | #D-* Purpose: treat return val of rsync |
---|
| 652 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 653 | #D- Error values and explanations can depend on your system version. |
---|
| 654 | function IGCM_sys_Rsync_out { |
---|
[719] | 655 | status=$1 |
---|
| 656 | if [ ! $status ] ; then |
---|
[619] | 657 | echo "rsync error !" |
---|
| 658 | fi |
---|
[70] | 659 | |
---|
[619] | 660 | if [ $MYLANG = "fr" ]; then |
---|
[719] | 661 | case $status in |
---|
[619] | 662 | 0) return ;; |
---|
| 663 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 664 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 665 | return;; |
---|
| 666 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 667 | echo "Incompatibilité de protocole." |
---|
| 668 | return;; |
---|
| 669 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 670 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 671 | echo "répertoires" |
---|
| 672 | return;; |
---|
| 673 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 674 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 675 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 676 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 677 | echo "pas par le serveur a été spécifiée." |
---|
| 678 | return;; |
---|
| 679 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 680 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 681 | return;; |
---|
| 682 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 683 | echo "Erreur d'entrée sortie fichier" |
---|
| 684 | return;; |
---|
| 685 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 686 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 687 | return;; |
---|
| 688 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 689 | echo "Erreur avec les diagnostics du programme" |
---|
| 690 | return;; |
---|
| 691 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 692 | echo "Erreur dans le code IPC" |
---|
| 693 | return;; |
---|
| 694 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 695 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 696 | return;; |
---|
| 697 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 698 | echo "Une erreur retournée par waitpid()" |
---|
| 699 | return;; |
---|
| 700 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 701 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 702 | return;; |
---|
| 703 | 23) echo "" |
---|
| 704 | echo "Erreur fichier inexistant" |
---|
| 705 | return;; |
---|
| 706 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 707 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 708 | return;; |
---|
[719] | 709 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $status |
---|
[619] | 710 | return;; |
---|
| 711 | esac |
---|
| 712 | elif [ $MYLANG = "en" ] ; then |
---|
[719] | 713 | case $status in |
---|
[619] | 714 | 0) return;; |
---|
| 715 | 1) echo "rsync error : Syntax or usage error " |
---|
| 716 | return;; |
---|
| 717 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 718 | return;; |
---|
| 719 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 720 | return;; |
---|
| 721 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 722 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 723 | echo "them; or an option was specified that is supported by the client and" |
---|
| 724 | echo "not by the server." |
---|
| 725 | return;; |
---|
| 726 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 727 | return;; |
---|
| 728 | 10) echo "rsync error : Error in socket I/O " |
---|
| 729 | return;; |
---|
| 730 | 11) echo "rsync error : Error in file I/O " |
---|
| 731 | return;; |
---|
| 732 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 733 | return;; |
---|
| 734 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 735 | return;; |
---|
| 736 | 14) echo "rsync error : Error in IPC code " |
---|
| 737 | return;; |
---|
| 738 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 739 | return;; |
---|
| 740 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 741 | return;; |
---|
| 742 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 743 | return;; |
---|
| 744 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 745 | return;; |
---|
| 746 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 747 | return;; |
---|
| 748 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 749 | return;; |
---|
[719] | 750 | *) echo "rsync error : return code of rsync unknown :" $status |
---|
[619] | 751 | return;; |
---|
| 752 | esac |
---|
| 753 | else |
---|
| 754 | echo "unknown language $MYLANG." |
---|
| 755 | return |
---|
| 756 | fi |
---|
[70] | 757 | } |
---|
| 758 | |
---|
| 759 | #D-#================================================== |
---|
| 760 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 761 | #D-* Purpose: Mirror libIGCM PATH and lib to ulam |
---|
| 762 | #D-* Examples: |
---|
| 763 | #D- |
---|
| 764 | function IGCM_sys_Mirror_libIGCM { |
---|
[619] | 765 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 766 | if ( $DEBUG_sys ) ; then |
---|
| 767 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 768 | fi |
---|
[70] | 769 | |
---|
[719] | 770 | typeset status |
---|
[70] | 771 | |
---|
[619] | 772 | IGCM_sys_RshPost <<-EOF |
---|
[193] | 773 | mkdir -p ${HOME_POST}/MIRROR/${PATHlibIGCM} |
---|
[70] | 774 | EOF |
---|
[619] | 775 | rsh ulam -n hostname > /dev/null 2>&1 |
---|
[719] | 776 | status=$? |
---|
| 777 | if [ $status -eq 0 ] ; then |
---|
[619] | 778 | echo ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME_POST}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 779 | ${RSYNC} ${RSYNC_opt} -e "rsh " ${libIGCM} ulam:${HOME_POST}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
[719] | 780 | status=$? |
---|
[70] | 781 | |
---|
[719] | 782 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 783 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on ulam." |
---|
| 784 | cat out_rsync |
---|
[70] | 785 | fi |
---|
[619] | 786 | IGCM_sys_Rm out_rsync |
---|
| 787 | else |
---|
| 788 | echo "No POST-TREATMENT avaible because ulam is down." |
---|
| 789 | fi |
---|
| 790 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
[70] | 791 | } |
---|
| 792 | |
---|
| 793 | #D-#================================================== |
---|
| 794 | #D-function IGCM_sys_Cp |
---|
| 795 | #D-* Purpose: generic cp |
---|
| 796 | #D-* Examples: |
---|
| 797 | #D- |
---|
| 798 | function IGCM_sys_Cp { |
---|
[619] | 799 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 800 | if ( $DEBUG_sys ) ; then |
---|
| 801 | echo "IGCM_sys_Cp :" $@ |
---|
| 802 | fi |
---|
[70] | 803 | |
---|
[719] | 804 | typeset status |
---|
[70] | 805 | |
---|
[619] | 806 | echo cp $@ > out_rsync 2>&1 |
---|
| 807 | \cp $@ >> out_rsync 2>&1 |
---|
[719] | 808 | status=$? |
---|
[70] | 809 | |
---|
[719] | 810 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 811 | echo "IGCM_sys_Cp : error." |
---|
| 812 | cat out_rsync |
---|
| 813 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 814 | else |
---|
| 815 | \rm out_rsync |
---|
| 816 | fi |
---|
| 817 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[70] | 818 | } |
---|
| 819 | |
---|
| 820 | #D-#================================================== |
---|
[92] | 821 | #D-function IGCM_sys_Rm |
---|
| 822 | #D-* Purpose: generic rm |
---|
| 823 | #D-* Examples: |
---|
| 824 | #D- |
---|
| 825 | function IGCM_sys_Rm { |
---|
[619] | 826 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 827 | if ( $DEBUG_sys ) ; then |
---|
| 828 | echo "IGCM_sys_Rm :" $@ |
---|
| 829 | fi |
---|
[92] | 830 | |
---|
[719] | 831 | typeset status |
---|
[92] | 832 | |
---|
[619] | 833 | echo rm $@ > out_rsync 2>&1 |
---|
| 834 | \rm $@ >> out_rsync 2>&1 |
---|
[719] | 835 | status=$? |
---|
[92] | 836 | |
---|
[719] | 837 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 838 | echo "IGCM_sys_Rm : error." |
---|
| 839 | cat out_rsync |
---|
| 840 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 841 | else |
---|
| 842 | \rm out_rsync |
---|
| 843 | fi |
---|
| 844 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[92] | 845 | } |
---|
| 846 | |
---|
| 847 | #D-#================================================== |
---|
[203] | 848 | #D-function IGCM_sys_RmRunDir |
---|
| 849 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 850 | #D- scheduler will do the job) |
---|
| 851 | #D-* Examples: |
---|
| 852 | #D- |
---|
| 853 | function IGCM_sys_RmRunDir { |
---|
[619] | 854 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 855 | if ( $DEBUG_sys ) ; then |
---|
| 856 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 857 | echo "Dummy call, let the scheduler do that." |
---|
| 858 | fi |
---|
| 859 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[203] | 860 | } |
---|
| 861 | |
---|
| 862 | #D-#================================================== |
---|
[70] | 863 | #D-function IGCM_sys_Mv |
---|
| 864 | #D-* Purpose: generic move |
---|
| 865 | #D-* Examples: |
---|
| 866 | #D- |
---|
| 867 | function IGCM_sys_Mv { |
---|
[619] | 868 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 869 | if ( $DEBUG_sys ) ; then |
---|
| 870 | echo "IGCM_sys_Mv :" $@ |
---|
| 871 | fi |
---|
[70] | 872 | |
---|
[619] | 873 | if [ $DRYRUN = 0 ]; then |
---|
[70] | 874 | |
---|
[719] | 875 | typeset status |
---|
[619] | 876 | |
---|
| 877 | echo mv $@ > out_rsync 2>&1 |
---|
| 878 | \mv $@ >> out_rsync 2>&1 |
---|
[719] | 879 | status=$? |
---|
[619] | 880 | |
---|
[719] | 881 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 882 | echo "IGCM_sys_Mv : error in mv." |
---|
| 883 | cat out_rsync |
---|
| 884 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[173] | 885 | else |
---|
[619] | 886 | \rm out_rsync |
---|
[70] | 887 | fi |
---|
[619] | 888 | else |
---|
| 889 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 890 | fi |
---|
[70] | 891 | |
---|
[619] | 892 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[70] | 893 | } |
---|
| 894 | |
---|
| 895 | #D-#================================================== |
---|
| 896 | #D-function IGCM_sys_Put_Dir |
---|
| 897 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 898 | #D-* Examples: |
---|
| 899 | #D- |
---|
| 900 | function IGCM_sys_Put_Dir { |
---|
[619] | 901 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 902 | if ( $DEBUG_sys ) ; then |
---|
| 903 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 904 | fi |
---|
| 905 | if [ $DRYRUN = 0 ]; then |
---|
| 906 | if [ ! -d ${1} ] ; then |
---|
| 907 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 908 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 909 | return |
---|
[70] | 910 | fi |
---|
| 911 | |
---|
[719] | 912 | typeset status |
---|
[70] | 913 | |
---|
[619] | 914 | # Only if we use rsync |
---|
| 915 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 916 | # |
---|
| 917 | #USUAL WAY |
---|
| 918 | rcp -r $1 ${STOREHOST}:$2 > out_rsync 2>&1 |
---|
[719] | 919 | status=$? |
---|
[70] | 920 | |
---|
[719] | 921 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 922 | echo "IGCM_sys_Put_Dir : error." |
---|
| 923 | cat out_rsync |
---|
| 924 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[70] | 925 | else |
---|
[619] | 926 | \rm out_rsync |
---|
[70] | 927 | fi |
---|
[619] | 928 | else |
---|
| 929 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 930 | fi |
---|
| 931 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[70] | 932 | } |
---|
| 933 | |
---|
| 934 | #D-#================================================== |
---|
| 935 | #D-function IGCM_sys_Get_Dir |
---|
| 936 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
| 937 | #D-* Examples: |
---|
| 938 | #D- |
---|
| 939 | function IGCM_sys_Get_Dir { |
---|
[619] | 940 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 941 | if ( $DEBUG_sys ) ; then |
---|
| 942 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 943 | fi |
---|
| 944 | if [ $DRYRUN = 0 ]; then |
---|
| 945 | if [ ! -d ${1} ] ; then |
---|
| 946 | echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 947 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 948 | return |
---|
[70] | 949 | fi |
---|
| 950 | |
---|
[719] | 951 | typeset status |
---|
[70] | 952 | |
---|
[619] | 953 | #USUAL WAY |
---|
| 954 | rcp -rp ${STOREHOST}:$1 $2 > out_rsync 2>&1 |
---|
[719] | 955 | status=$? |
---|
[70] | 956 | |
---|
[719] | 957 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 958 | echo "IGCM_sys_Get_Dir : error." |
---|
| 959 | cat out_rsync |
---|
| 960 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[70] | 961 | fi |
---|
[619] | 962 | else |
---|
| 963 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 964 | fi |
---|
| 965 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[70] | 966 | } |
---|
| 967 | |
---|
[689] | 968 | #==================================================== |
---|
| 969 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 970 | if ( $MirrorlibIGCM ) ; then |
---|
| 971 | IGCM_sys_Mirror_libIGCM |
---|
| 972 | fi |
---|
| 973 | |
---|
[70] | 974 | #D-#================================================== |
---|
| 975 | #D-function IGCM_sys_Put_Rest |
---|
| 976 | #D-* Purpose: Put computied restarts on $(ARCHIVE). |
---|
| 977 | #D- File and target directory must exist. |
---|
| 978 | #D-* Examples: |
---|
| 979 | #D- |
---|
| 980 | function IGCM_sys_Put_Rest { |
---|
[619] | 981 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 982 | if ( $DEBUG_sys ) ; then |
---|
| 983 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 984 | fi |
---|
| 985 | if [ $DRYRUN = 0 ]; then |
---|
| 986 | if [ ! -f ${1} ] ; then |
---|
| 987 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 988 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[70] | 989 | fi |
---|
| 990 | |
---|
[719] | 991 | typeset status |
---|
[619] | 992 | # |
---|
| 993 | if [ X${JobType} = XRUN ] ; then |
---|
| 994 | IGCM_sys_Chmod 444 ${1} |
---|
| 995 | fi |
---|
| 996 | # |
---|
| 997 | # Only if we use rsync |
---|
| 998 | #IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 999 | # |
---|
| 1000 | #USUAL WAY |
---|
| 1001 | mfput $1 $2 > out_rsync 2>&1 |
---|
[719] | 1002 | status=$? |
---|
[70] | 1003 | |
---|
[619] | 1004 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 1005 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1006 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[70] | 1007 | |
---|
[619] | 1008 | # #RSYNC WITH NFS USE |
---|
| 1009 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1010 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[70] | 1011 | |
---|
[719] | 1012 | # status=$? |
---|
| 1013 | # IGCM_sys_Rsync_out $status |
---|
[70] | 1014 | |
---|
[619] | 1015 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[719] | 1016 | # (( status=status+$? )) |
---|
[619] | 1017 | |
---|
[719] | 1018 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1019 | echo "IGCM_sys_Put_Rest : error." |
---|
| 1020 | cat out_rsync |
---|
| 1021 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[70] | 1022 | else |
---|
[619] | 1023 | \rm out_rsync |
---|
[70] | 1024 | fi |
---|
[619] | 1025 | else |
---|
| 1026 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1027 | fi |
---|
| 1028 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[70] | 1029 | } |
---|
| 1030 | |
---|
| 1031 | #D-#================================================== |
---|
[619] | 1032 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 1033 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 1034 | #D- File and target directory must exist. |
---|
| 1035 | #D-* Examples: |
---|
| 1036 | #D- |
---|
| 1037 | function IGCM_sys_PutBuffer_Rest { |
---|
| 1038 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 1039 | if ( $DEBUG_sys ) ; then |
---|
| 1040 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 1041 | fi |
---|
| 1042 | if [ $DRYRUN = 0 ]; then |
---|
| 1043 | if [ ! -f ${1} ] ; then |
---|
| 1044 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 1045 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1046 | fi |
---|
| 1047 | |
---|
[719] | 1048 | typeset status |
---|
[619] | 1049 | # |
---|
| 1050 | if [ X${JobType} = XRUN ] ; then |
---|
| 1051 | IGCM_sys_Chmod 444 ${1} |
---|
| 1052 | fi |
---|
| 1053 | |
---|
| 1054 | # |
---|
| 1055 | # USUAL WAY |
---|
| 1056 | \cp $1 $2 > out_rsync 2>&1 |
---|
[719] | 1057 | status=$? |
---|
[619] | 1058 | |
---|
[719] | 1059 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1060 | echo "IGCM_sys_PutBuffer_Rest : error." |
---|
| 1061 | cat out_rsync |
---|
| 1062 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1063 | else |
---|
| 1064 | \rm out_rsync |
---|
| 1065 | fi |
---|
| 1066 | else |
---|
| 1067 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1068 | fi |
---|
| 1069 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 1070 | } |
---|
| 1071 | |
---|
| 1072 | #D-#================================================== |
---|
[70] | 1073 | #D-function IGCM_sys_Put_Out |
---|
| 1074 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
| 1075 | #D-* Examples: |
---|
| 1076 | #D- |
---|
| 1077 | function IGCM_sys_Put_Out { |
---|
[619] | 1078 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 1079 | if ( $DEBUG_sys ) ; then |
---|
| 1080 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 1081 | fi |
---|
| 1082 | if [ $DRYRUN = 0 ]; then |
---|
| 1083 | if [ ! -f ${1} ] ; then |
---|
| 1084 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 1085 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1086 | return 1 |
---|
[70] | 1087 | fi |
---|
| 1088 | |
---|
[719] | 1089 | typeset status |
---|
[619] | 1090 | # |
---|
| 1091 | if [ X${JobType} = XRUN ] ; then |
---|
| 1092 | if [ X${3} = X ] ; then |
---|
| 1093 | IGCM_sys_Chmod 444 ${1} |
---|
| 1094 | fi |
---|
| 1095 | fi |
---|
| 1096 | # |
---|
| 1097 | # Only if we use rsync |
---|
| 1098 | #IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 1099 | # |
---|
| 1100 | #USUAL WAY |
---|
| 1101 | mfput $1 $2 > out_rsync 2>&1 |
---|
[719] | 1102 | status=$? |
---|
[70] | 1103 | |
---|
[619] | 1104 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 1105 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1106 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[70] | 1107 | |
---|
[619] | 1108 | # #RSYNC WITH NFS USE |
---|
| 1109 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1110 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[70] | 1111 | |
---|
[719] | 1112 | # status=$? |
---|
| 1113 | # IGCM_sys_Rsync_out $status |
---|
[70] | 1114 | |
---|
[619] | 1115 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[719] | 1116 | # (( status=status+$? )) |
---|
[70] | 1117 | |
---|
[719] | 1118 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1119 | echo "IGCM_sys_Put_Out : error." |
---|
| 1120 | cat out_rsync |
---|
| 1121 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
[70] | 1122 | else |
---|
[619] | 1123 | \rm out_rsync |
---|
[70] | 1124 | fi |
---|
[619] | 1125 | IGCM_sys_Rm out_rsync |
---|
| 1126 | else |
---|
| 1127 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1128 | fi |
---|
| 1129 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1130 | return 0 |
---|
[70] | 1131 | } |
---|
| 1132 | |
---|
| 1133 | #D-#================================================== |
---|
[619] | 1134 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1135 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1136 | #D-* Examples: |
---|
| 1137 | #D- |
---|
| 1138 | function IGCM_sys_PutBuffer_Out { |
---|
| 1139 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1140 | if ( $DEBUG_sys ) ; then |
---|
| 1141 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1142 | fi |
---|
| 1143 | if [ $DRYRUN = 0 ]; then |
---|
| 1144 | if [ ! -f ${1} ] ; then |
---|
| 1145 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1146 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1147 | return 1 |
---|
| 1148 | fi |
---|
| 1149 | # |
---|
| 1150 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1151 | # |
---|
[719] | 1152 | typeset status |
---|
[619] | 1153 | |
---|
| 1154 | if [ X${JobType} = XRUN ] ; then |
---|
| 1155 | if [ X${3} = X ] ; then |
---|
| 1156 | IGCM_sys_Chmod 444 ${1} |
---|
| 1157 | fi |
---|
| 1158 | fi |
---|
| 1159 | # |
---|
| 1160 | # USUAL WAY |
---|
| 1161 | \cp $1 $2 > out_rsync 2>&1 |
---|
[719] | 1162 | status=$? |
---|
[619] | 1163 | |
---|
[719] | 1164 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1165 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1166 | cat out_rsync |
---|
| 1167 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
| 1168 | else |
---|
| 1169 | \rm out_rsync |
---|
| 1170 | fi |
---|
| 1171 | else |
---|
| 1172 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1173 | fi |
---|
| 1174 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1175 | return 0 |
---|
| 1176 | } |
---|
| 1177 | |
---|
| 1178 | #D-#================================================== |
---|
[70] | 1179 | #D-function IGCM_sys_Get |
---|
| 1180 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1181 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1182 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1183 | function IGCM_sys_Get { |
---|
[619] | 1184 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[70] | 1185 | |
---|
[719] | 1186 | typeset DEST status dm_liste ifile target |
---|
[70] | 1187 | |
---|
[619] | 1188 | if ( $DEBUG_sys ) ; then |
---|
| 1189 | echo "IGCM_sys_Get :" $@ |
---|
| 1190 | fi |
---|
| 1191 | if [ $DRYRUN -le 2 ]; then |
---|
| 1192 | if [ X${1} = X'/l' ] ; then |
---|
| 1193 | # test if the first file is present in the old computation : |
---|
| 1194 | eval set +A dm_liste \${${2}} |
---|
| 1195 | else |
---|
| 1196 | dm_liste=${1} |
---|
[70] | 1197 | fi |
---|
[619] | 1198 | eval DEST=\${${#}} |
---|
[70] | 1199 | |
---|
[619] | 1200 | # test if the (first) file is present in the old computation : |
---|
| 1201 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
[719] | 1202 | status=$? |
---|
| 1203 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1204 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 1205 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1206 | return |
---|
| 1207 | fi |
---|
[70] | 1208 | |
---|
[619] | 1209 | # SD : dm_liste is not suited for computing job |
---|
| 1210 | # because we change filename during transfert |
---|
| 1211 | # dm_liste is better suited for post-treatment |
---|
| 1212 | #dm_liste=" " |
---|
| 1213 | #(( ifile=1 )) |
---|
| 1214 | #while [ $ifile -lt $# ] ; do |
---|
| 1215 | # dm_liste=$( eval echo ${dm_liste} " "\${${ifile}} ) |
---|
| 1216 | # (( ifile = ifile + 1 )) |
---|
| 1217 | #done |
---|
| 1218 | #DEST=$( eval echo \${${#}} ) |
---|
[70] | 1219 | |
---|
[619] | 1220 | #USUAL WAY |
---|
| 1221 | mfget ${dm_liste[*]} ${DEST} > out_rsync 2>&1 |
---|
[719] | 1222 | status=$? |
---|
[70] | 1223 | |
---|
[619] | 1224 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 1225 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1226 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[70] | 1227 | |
---|
[619] | 1228 | # #RSYNC WITH NFS USE |
---|
| 1229 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1230 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[70] | 1231 | |
---|
[719] | 1232 | # status=$? |
---|
| 1233 | # IGCM_sys_Rsync_out $status |
---|
[70] | 1234 | |
---|
[619] | 1235 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[719] | 1236 | # (( status=status+$? )) |
---|
[70] | 1237 | |
---|
[719] | 1238 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1239 | echo "IGCM_sys_Get : copy error." |
---|
| 1240 | cat out_rsync |
---|
| 1241 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
[70] | 1242 | else |
---|
[619] | 1243 | \rm out_rsync |
---|
[70] | 1244 | fi |
---|
[619] | 1245 | else |
---|
| 1246 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1247 | fi |
---|
| 1248 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[70] | 1249 | } |
---|
| 1250 | |
---|
[619] | 1251 | #D-#================================================== |
---|
| 1252 | #D-function IGCM_sys_GetBuffer |
---|
| 1253 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1254 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1255 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1256 | function IGCM_sys_GetBuffer { |
---|
| 1257 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1258 | |
---|
[719] | 1259 | typeset DEST status buf_liste ifile target file_work |
---|
[619] | 1260 | |
---|
| 1261 | if ( $DEBUG_sys ) ; then |
---|
| 1262 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1263 | fi |
---|
| 1264 | if [ $DRYRUN -le 2 ]; then |
---|
| 1265 | if [ X${1} = X'/l' ] ; then |
---|
| 1266 | # test if the first file is present in the old computation : |
---|
| 1267 | eval set +A buf_liste \${${2}} |
---|
| 1268 | else |
---|
| 1269 | eval set +A buf_liste ${1} |
---|
| 1270 | fi |
---|
| 1271 | eval DEST=\${${#}} |
---|
| 1272 | |
---|
| 1273 | #USUAL WAY |
---|
| 1274 | if [ X${1} = X'/l' ] ; then |
---|
[719] | 1275 | (( status=0 )) |
---|
[619] | 1276 | for target in ${buf_liste[*]} ; do |
---|
| 1277 | local_file=$( basename ${target} ) |
---|
| 1278 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
[719] | 1279 | (( status = status + $? )) |
---|
[619] | 1280 | done |
---|
| 1281 | else |
---|
| 1282 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
[719] | 1283 | status=$? |
---|
[619] | 1284 | fi |
---|
| 1285 | |
---|
[719] | 1286 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 1287 | echo "IGCM_sys_GetBuffer : copy error." |
---|
| 1288 | cat out_rsync |
---|
| 1289 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1290 | else |
---|
| 1291 | \rm out_rsync |
---|
| 1292 | fi |
---|
| 1293 | else |
---|
| 1294 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1295 | fi |
---|
| 1296 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
| 1297 | } |
---|
| 1298 | |
---|
[70] | 1299 | ############################################################## A FINIR !! |
---|
| 1300 | |
---|
| 1301 | #D-#================================================== |
---|
| 1302 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1303 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1304 | #D-* Examples: |
---|
| 1305 | #D- |
---|
| 1306 | function IGCM_sys_GetDate_FichWork { |
---|
[619] | 1307 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1308 | if ( $DEBUG_sys ) ; then |
---|
| 1309 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1310 | fi |
---|
| 1311 | typeset dateF |
---|
| 1312 | set +A dateF -- $( rsh ${MASTER} -n /opt/freeware/bin/ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1313 | eval ${2}=${dateF[5]} |
---|
[537] | 1314 | |
---|
[619] | 1315 | # donne la date filesys d'un fichier sur la machine work |
---|
| 1316 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
[70] | 1317 | } |
---|
| 1318 | |
---|
| 1319 | #D-#================================================== |
---|
| 1320 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[619] | 1321 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[70] | 1322 | #D-* Examples: |
---|
| 1323 | #D- |
---|
| 1324 | function IGCM_sys_GetDate_FichArchive { |
---|
[619] | 1325 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1326 | if ( $DEBUG_sys ) ; then |
---|
| 1327 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1328 | fi |
---|
| 1329 | typeset dateF |
---|
| 1330 | set +A dateF -- $( rsh ${STOREHOST} -n ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1331 | eval ${2}=${dateF[5]} |
---|
[537] | 1332 | |
---|
[619] | 1333 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
[70] | 1334 | } |
---|
| 1335 | |
---|
| 1336 | ############################################################## |
---|
| 1337 | # REBUILD OPERATOR |
---|
| 1338 | |
---|
| 1339 | function IGCM_sys_rebuild { |
---|
[619] | 1340 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1341 | if ( $DEBUG_sys ) ; then |
---|
| 1342 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1343 | fi |
---|
| 1344 | /homegpfs/rech/psl/rpsl035/bin/rebuild -f -o $@ |
---|
| 1345 | if [ $? -gt 0 ] ; then |
---|
| 1346 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1347 | IGCM_debug_Exit "rebuild" |
---|
| 1348 | fi |
---|
[70] | 1349 | |
---|
[619] | 1350 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[70] | 1351 | } |
---|
| 1352 | |
---|
[697] | 1353 | function IGCM_sys_rebuild_station { |
---|
| 1354 | IGCM_debug_PushStack "IGCM_sys_rebuild_station" -- $@ |
---|
| 1355 | typeset i list_opt file_in file_out prefix_invert list_invert |
---|
| 1356 | if ( $DEBUG_sys ) ; then |
---|
| 1357 | echo "IGCM_sys_rebuild_station :" $@ |
---|
| 1358 | fi |
---|
| 1359 | list_opt=$@ |
---|
| 1360 | |
---|
| 1361 | # Invert Axis : t,x -> x,t |
---|
| 1362 | # t,pres,x -> x,t,pres |
---|
| 1363 | # So that we can concatenate along x |
---|
| 1364 | i=0 |
---|
| 1365 | for file_in in ${list_opt} ; do |
---|
| 1366 | (( i = i + 1)) |
---|
| 1367 | [ ${i} = 1 ] && file_out=${file_in} && continue |
---|
| 1368 | prefix_invert=$( basename ${file_in} .nc ) |
---|
| 1369 | IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs ${file_in} ${prefix_invert}_xt.nc |
---|
| 1370 | list_invert[${#list_invert[*]}]=${prefix_invert}_xt.nc |
---|
| 1371 | done |
---|
| 1372 | |
---|
| 1373 | # Concatenate |
---|
| 1374 | IGCM_sys_ncrcat ${list_invert[*]} histstn_xt.nc |
---|
| 1375 | |
---|
| 1376 | # Re-ivert file |
---|
| 1377 | IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x histstn_xt.nc ${file_out} |
---|
| 1378 | |
---|
| 1379 | # Station re-ordering is too expansive to be run within libICGM |
---|
| 1380 | # This is due to (ncpdq - nrcat - ncpdq) I/O sequence. |
---|
| 1381 | # This re-ordering must be done "in memory" by the cmorization process |
---|
| 1382 | # Anyway this is the best sequence using (ncpdq - nrcat - ncpdq) |
---|
| 1383 | # BEGIN reordering |
---|
| 1384 | |
---|
| 1385 | # Only LMDZ text output contains the exact ordering of the station. |
---|
| 1386 | # We isolate this in the code below: |
---|
| 1387 | # 0 38 -157.5000000000000 70.98591549295774 |
---|
| 1388 | # 0 54 27.49999999999999 67.18309859154928 |
---|
| 1389 | # 0 56 -62.50000000000001 82.39436619718309 |
---|
| 1390 | # 0 79 12.49999999999999 78.59154929577466 |
---|
| 1391 | # 0 116 -165.0000000000000 76.05633802816901 |
---|
| 1392 | # 0 117 130.0000000000000 70.98591549295774 |
---|
| 1393 | # 0 118 110.0000000000000 87.46478873239437 |
---|
| 1394 | # 1 40 4.999999999999995 51.97183098591550 |
---|
| 1395 | # typeset iStation iProc list_opt file_in file_out prefix_invert |
---|
| 1396 | # typeset -Z4 j4 |
---|
| 1397 | # typeset -Z3 j3 |
---|
| 1398 | |
---|
| 1399 | # unset list_opt |
---|
| 1400 | # set +A list_opt $@ |
---|
| 1401 | |
---|
| 1402 | # Filename after rebuild |
---|
| 1403 | # file_out=${list_opt[0]} |
---|
| 1404 | # Prefix of output files |
---|
| 1405 | # prefix_invert=$( basename ${file_out} .nc ) |
---|
| 1406 | # Number of procs |
---|
| 1407 | # num_proc=$( grep -i mpi_size ${PREFIX}_${Exe_Output} | wc -l ) |
---|
| 1408 | |
---|
| 1409 | # iProc=0 |
---|
| 1410 | # while [ ${iProc} -lt ${num_proc} ] ; do |
---|
| 1411 | # Array containing Station as a number |
---|
| 1412 | # unset proc_stn |
---|
| 1413 | # set +A proc_stn $( grep "iophy_mpi rank ip lon lat $iProc" ${PREFIX}_${Exe_Output} | sed -e "s/iophy_mpi rank ip lon lat //g" | awk ' {print $2}' ) |
---|
| 1414 | # Number of stations produced by processor proc |
---|
| 1415 | # stationLast=${#proc_stn[*]} |
---|
| 1416 | # Proc number on 4 digits |
---|
| 1417 | # j4=${iProc} |
---|
| 1418 | # Init |
---|
| 1419 | # iStation=0 |
---|
| 1420 | # while [ ${iStation} -lt ${stationLast} ] ; do |
---|
| 1421 | # Station number on 3 digits |
---|
| 1422 | # j3=${proc_stn[${iStation}]} |
---|
| 1423 | # Extract station |
---|
| 1424 | # Invert Axis : t,x -> x,t |
---|
| 1425 | # t,pres,x -> x,t,pres |
---|
| 1426 | # So that we can concatenate along x |
---|
| 1427 | # IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs -d x,$iStation,$iStation ${prefix_invert}_${j4}.nc ${prefix_invert}_stn_${j3}.nc |
---|
| 1428 | # (( iStation = iStation + 1 )) |
---|
| 1429 | # done |
---|
| 1430 | # (( iProc = iProc + 1 )) |
---|
| 1431 | # done |
---|
| 1432 | |
---|
| 1433 | # Concatenate all station along x |
---|
| 1434 | # IGCM_sys_ncrcat ${prefix_invert}_stn_???.nc ${prefix_invert}_xt.nc |
---|
| 1435 | |
---|
| 1436 | # Re-invert file |
---|
| 1437 | # IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x ${prefix_invert}_xt.nc ${file_out} |
---|
| 1438 | |
---|
| 1439 | # END reordering |
---|
| 1440 | |
---|
| 1441 | IGCM_debug_PopStack "IGCM_sys_rebuild_station" |
---|
| 1442 | } |
---|
| 1443 | |
---|
[70] | 1444 | ############################################################ |
---|
| 1445 | # Activate Running Environnment Variables |
---|
| 1446 | |
---|
| 1447 | function IGCM_sys_activ_variables { |
---|
[619] | 1448 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1449 | if ( $DEBUG_sys ) ; then |
---|
| 1450 | echo "IGCM_sys_activ_variables " |
---|
| 1451 | fi |
---|
[70] | 1452 | |
---|
| 1453 | # -------------------------------------------------------------------- |
---|
[688] | 1454 | #D- OpenMP thread memory specifications : only one time |
---|
[70] | 1455 | # -------------------------------------------------------------------- |
---|
[688] | 1456 | echo $XLSMPOPTS | grep stack=524288000 1>/dev/null 2>&1 || export XLSMPOPTS=$XLSMPOPTS:stack=524288000 |
---|
[70] | 1457 | |
---|
| 1458 | # -------------------------------------------------------------------- |
---|
| 1459 | #D- Other specifications |
---|
| 1460 | # -------------------------------------------------------------------- |
---|
| 1461 | |
---|
[619] | 1462 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[70] | 1463 | |
---|
| 1464 | } |
---|
| 1465 | |
---|
| 1466 | ############################################################ |
---|
| 1467 | # Desactivate Running Environnment Variables |
---|
| 1468 | |
---|
| 1469 | function IGCM_sys_desactiv_variables { |
---|
[619] | 1470 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1471 | if ( $DEBUG_sys ) ; then |
---|
| 1472 | echo "IGCM_sys_desactiv_variables " |
---|
| 1473 | fi |
---|
[70] | 1474 | # -------------------------------------------------------------------- |
---|
| 1475 | #D- MPI specifications |
---|
| 1476 | # -------------------------------------------------------------------- |
---|
| 1477 | |
---|
| 1478 | # -------------------------------------------------------------------- |
---|
| 1479 | #D- Other specifications |
---|
| 1480 | # -------------------------------------------------------------------- |
---|
| 1481 | |
---|
[619] | 1482 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
| 1483 | |
---|
[70] | 1484 | } |
---|
| 1485 | |
---|
| 1486 | ############################################################ |
---|
[619] | 1487 | # Build MPI/OMP scripts |
---|
| 1488 | function IGCM_sys_build_execution_scripts |
---|
| 1489 | { |
---|
| 1490 | IGCM_debug_PushStack "IGCM_sys_build_execution_scripts" $@ |
---|
| 1491 | if ( $DEBUG_sys ) ; then |
---|
| 1492 | echo "IGCM_sys_build_execution_scripts " $@ |
---|
| 1493 | fi |
---|
[70] | 1494 | |
---|
[619] | 1495 | typeset NbNodes_Job NbProc_Job comp_proc_mpi_loc comp_proc_omp_loc mpi_count |
---|
| 1496 | |
---|
| 1497 | if [ ! -f ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} ] ; then |
---|
| 1498 | IGCM_debug_Exit "IGCM_sys_vargas build_execution_scripts : Job_${config_UserChoices_JobName} don't exist in SUBMIT_DIR : ${SUBMIT_DIR} " |
---|
| 1499 | fi |
---|
| 1500 | |
---|
| 1501 | if ( ${OK_PARA_MPMD} ) ; then |
---|
| 1502 | |
---|
| 1503 | if [ -f run_file ] ; then |
---|
| 1504 | IGCM_sys_Rm -f run_file |
---|
| 1505 | fi |
---|
| 1506 | touch run_file |
---|
| 1507 | |
---|
| 1508 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1509 | # NEW : 2 Noeuds |
---|
| 1510 | # @ task_geometry={(0)(1,2,3)} |
---|
| 1511 | # Nombre de processus demandes |
---|
| 1512 | echo "Job_${config_UserChoices_JobName} includes task_geometry = \c" |
---|
| 1513 | cat ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} | grep "task_geometry" | sed -e "s/[^(]*([^(]*/(/g" |
---|
| 1514 | echo "Job_${config_UserChoices_JobName} includes task_geometry with NbNodes = \c" |
---|
| 1515 | cat ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} | grep "task_geometry" | sed -e "s/[^(]*([^(]*/(/g" | wc -c |
---|
| 1516 | NbNodes_Job=$(( $( cat ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} | grep "task_geometry" | sed -e "s/[^(]*([^(]*/(/g" | wc -c ) - 1 )) |
---|
| 1517 | |
---|
| 1518 | if [ ${NbNodes_Job} -eq 0 ] ; then |
---|
| 1519 | IGCM_debug_Print 2 "Error in Job_${config_UserChoices_JobName} ressources : no task_geometry defined with OpenMP run." |
---|
| 1520 | exit 1 |
---|
| 1521 | fi |
---|
| 1522 | else |
---|
| 1523 | |
---|
| 1524 | # OLD : |
---|
| 1525 | # @ total_tasks = 3 |
---|
| 1526 | # @ environment = "BATCH_NUM_PROC_TOT=3" |
---|
| 1527 | # Pas d OpenMP |
---|
| 1528 | # @ resources = ConsumableCpus(1) |
---|
| 1529 | |
---|
| 1530 | echo "Job_${config_UserChoices_JobName} includes total_tasks = \c" |
---|
| 1531 | cat ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} | grep "total_tasks" | sed -e "s/.*total_tasks = //" |
---|
| 1532 | NbProc_Job=$( cat ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} | grep "total_tasks" | sed -e "s/.*total_tasks = //" ) |
---|
| 1533 | NbProc_Job=${NbProc_Job:=0} |
---|
| 1534 | if [ ${NbProc_Job} -eq 0 ] ; then |
---|
| 1535 | IGCM_debug_Print 2 "Error in Job_${config_UserChoices_JobName} ressources : no total_tasks defined with MPI only run." |
---|
| 1536 | exit 1 |
---|
| 1537 | fi |
---|
| 1538 | if ( $( egrep '^# *@ *resources *= *ConsumableCpus\(1\)' ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} >/dev/null 2>&1 ) ) ; then |
---|
| 1539 | IGCM_debug_Print 2 "ressources = ConsumableCpus(1) line found into Job_${config_UserChoices_JobName}" |
---|
| 1540 | else |
---|
| 1541 | IGCM_debug_Print 2 "Error in Job_${config_UserChoices_JobName} ressources = line not found. Job should include resources = ConsumableCpus(1) " |
---|
| 1542 | exit 1 |
---|
| 1543 | fi |
---|
| 1544 | fi |
---|
| 1545 | |
---|
| 1546 | # run_file construction |
---|
| 1547 | |
---|
| 1548 | # Then first loop on the components for the coupler ie oasis |
---|
| 1549 | |
---|
| 1550 | ### the coupler ie oasis must be the first one |
---|
| 1551 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1552 | |
---|
| 1553 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1554 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1555 | |
---|
| 1556 | # for CPL component only |
---|
| 1557 | if [ "X${comp}" = "XCPL" ] ; then |
---|
| 1558 | |
---|
| 1559 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 1560 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1561 | |
---|
| 1562 | if ( ${OK_PARA_MPI} ) ; then |
---|
| 1563 | |
---|
| 1564 | (( mpi_count = 1 )) |
---|
| 1565 | until [ ${mpi_count} -gt ${comp_proc_mpi_loc} ] ; do |
---|
| 1566 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1567 | echo "env OMP_NUM_THREADS=${comp_proc_omp_loc} ./${ExeNameOut} " >> run_file |
---|
| 1568 | else |
---|
| 1569 | echo "./${ExeNameOut}" >> run_file |
---|
| 1570 | fi |
---|
| 1571 | (( mpi_count = mpi_count + 1 )) |
---|
| 1572 | done |
---|
| 1573 | else |
---|
| 1574 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1575 | echo "env OMP_NUM_THREADS=${comp_proc_omp_loc} ./${ExeNameOut} " >> run_file |
---|
| 1576 | else |
---|
| 1577 | echo "./${ExeNameOut} " >> run_file |
---|
| 1578 | fi |
---|
| 1579 | fi |
---|
| 1580 | fi |
---|
| 1581 | done |
---|
| 1582 | |
---|
| 1583 | # Then second loop on the components |
---|
| 1584 | |
---|
| 1585 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1586 | |
---|
| 1587 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1588 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1589 | |
---|
| 1590 | # Only if we really have an executable for the component and not the coupler ie oasis: |
---|
| 1591 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 1592 | |
---|
| 1593 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 1594 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1595 | |
---|
| 1596 | if ( ${OK_PARA_MPI} ) ; then |
---|
| 1597 | |
---|
| 1598 | (( mpi_count = 1 )) |
---|
| 1599 | until [ ${mpi_count} -gt ${comp_proc_mpi_loc} ] ; do |
---|
| 1600 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1601 | echo "env OMP_NUM_THREADS=${comp_proc_omp_loc} ./${ExeNameOut} " >> run_file |
---|
| 1602 | else |
---|
| 1603 | echo "./${ExeNameOut}" >> run_file |
---|
| 1604 | fi |
---|
| 1605 | (( mpi_count = mpi_count + 1 )) |
---|
| 1606 | done |
---|
| 1607 | else |
---|
| 1608 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1609 | echo "env OMP_NUM_THREADS=${comp_proc_omp_loc} ./${ExeNameOut} " >> run_file |
---|
| 1610 | else |
---|
| 1611 | # to be tested : no MPI only OpenMP into MPMD mode |
---|
| 1612 | echo "./${ExeNameOut} " >> run_file |
---|
| 1613 | fi |
---|
| 1614 | fi |
---|
| 1615 | fi |
---|
| 1616 | done |
---|
| 1617 | |
---|
| 1618 | EXECUTION="${HOST_MPIRUN_COMMAND} -pgmmodel mpmd -cmdfile ./run_file" |
---|
| 1619 | |
---|
| 1620 | IGCM_sys_Chmod u+x run_file |
---|
[70] | 1621 | if ( $DEBUG_sys ) ; then |
---|
[619] | 1622 | echo "run_file contains : " |
---|
| 1623 | cat run_file |
---|
[70] | 1624 | fi |
---|
[395] | 1625 | |
---|
[619] | 1626 | else # Only one executable. launch it. |
---|
[395] | 1627 | |
---|
[619] | 1628 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[395] | 1629 | |
---|
[619] | 1630 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1631 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[70] | 1632 | |
---|
[664] | 1633 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${ExeNameOut}" != "Xinca.dat" ] ) ; then |
---|
| 1634 | EXECUTION="time ./${ExeNameOut}" |
---|
| 1635 | fi |
---|
[70] | 1636 | |
---|
[619] | 1637 | done |
---|
[395] | 1638 | |
---|
[619] | 1639 | fi |
---|
| 1640 | |
---|
| 1641 | IGCM_debug_Print 1 "sys vargas : execution command is " |
---|
| 1642 | IGCM_debug_Print 1 "$EXECUTION" |
---|
| 1643 | |
---|
| 1644 | IGCM_debug_PopStack "IGCM_sys_build_execution_scripts" |
---|
[70] | 1645 | } |
---|
[619] | 1646 | |
---|
| 1647 | function IGCM_sys_build_run_file { |
---|
| 1648 | |
---|
| 1649 | IGCM_debug_Print 3 " dummy function : IGCM_sys_build_run_file " |
---|
| 1650 | |
---|
| 1651 | } |
---|
[651] | 1652 | |
---|
| 1653 | ############################################################ |
---|
| 1654 | # Check of space available on temporary filesytems |
---|
| 1655 | function IGCM_sys_check_quota { |
---|
| 1656 | IGCM_debug_PushStack "IGCM_sys_check_quota" |
---|
| 1657 | if ( $DEBUG_sys ) ; then |
---|
| 1658 | echo "IGCM_sys_check_quota " |
---|
| 1659 | fi |
---|
| 1660 | # Limit of quota (in %) |
---|
| 1661 | limit_quota=90 |
---|
| 1662 | # Check of the volume |
---|
| 1663 | volume_quota=$(quota_u -w | grep 'Quota soft' | awk '{print $5}') |
---|
| 1664 | if [ ! X${volume_quota} = X ] ; then |
---|
| 1665 | quota_volume=${volume_quota%%\%} |
---|
| 1666 | # echo $quota_volume |
---|
| 1667 | if [ ${quota_volume} -ge ${limit_quota} ] ; then |
---|
[654] | 1668 | IGCM_debug_Print 1 "Please, check your quota of volume on workgpfs" |
---|
| 1669 | IGCM_debug_Print 1 "${quota_volume}% of your quota is used" |
---|
| 1670 | IGCM_debug_Print 1 "Use the quota_u -w command to check" |
---|
[651] | 1671 | IGCM_debug_Print 1 "You must have more than 10% available to run" |
---|
| 1672 | IGCM_debug_Exit "Not enough space to run ! STOP HERE" |
---|
| 1673 | IGCM_debug_Verif_Exit |
---|
| 1674 | fi |
---|
| 1675 | |
---|
| 1676 | fi |
---|
| 1677 | IGCM_debug_PopStack "IGCM_sys_check_quota" |
---|
| 1678 | } |
---|
[768] | 1679 | |
---|
| 1680 | #D-#================================================== |
---|
| 1681 | #D-function IGCM_sys_CountJobInQueue |
---|
| 1682 | #D-* Purpose: Check if job_name is currently |
---|
| 1683 | #D- running or in queue |
---|
| 1684 | #D-* Examples: IGCM_sys_CountJobInQueue ${JobName} NbRun |
---|
| 1685 | #D- |
---|
| 1686 | |
---|
| 1687 | function IGCM_sys_CountJobInQueue { |
---|
| 1688 | IGCM_debug_PushStack "IGCM_sys_CountJobInQueue" |
---|
| 1689 | if ( $DEBUG_sys ) ; then |
---|
| 1690 | echo "IGCM_sys_CountJobInQueue" |
---|
| 1691 | fi |
---|
| 1692 | |
---|
| 1693 | # Print only the full (-W) JobName (%jn) |
---|
| 1694 | NbRun=$( llq -W -f %jn | grep -c "$1" ) |
---|
| 1695 | |
---|
| 1696 | eval ${2}=${NbRun} |
---|
| 1697 | |
---|
| 1698 | IGCM_debug_PopStack "IGCM_sys_CountJobInQueue" |
---|
| 1699 | } |
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