[619] | 1 | #!/bin/ksh |
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[55] | 2 | |
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| 3 | #************************************************************** |
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| 4 | # Author: Sebastien Denvil |
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[373] | 5 | # Contact: Sebastien.Denvil__at__ipsl.jussieu.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[55] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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[619] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[55] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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[56] | 21 | #D-LibIGCM_sys for Ulam |
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[55] | 22 | #D-#================================================== |
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| 23 | #D- |
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[619] | 24 | #D- This ksh library if a layer under some usefull |
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[55] | 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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| 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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| 47 | # ------------------------------------------------------------------------------------- |
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| 48 | # | 0 | yes | yes | yes | yes | |
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| 49 | # ------------------------------------------------------------------------------------- |
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| 50 | # | 1 | yes | yes | yes | no | |
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| 51 | # ------------------------------------------------------------------------------------- |
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| 52 | # | 2 | yes | yes | no | no | |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | 3 | yes | no | no | no | |
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| 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[619] | 64 | # Host and user names |
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[217] | 65 | # $hostname ou hostname |
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[228] | 66 | typeset HOST=${HOST:=$( hostname )} |
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[55] | 67 | # $username ou whoami |
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[228] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[55] | 69 | |
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| 70 | #D- |
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| 71 | #D-#================================================== |
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| 72 | #D-Program used in libIGCM |
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| 73 | #D-#================================================== |
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| 74 | |
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| 75 | # rsync with path |
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| 76 | typeset -r RSYNC=/usr/bin/rsync |
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| 77 | # RSYNC_opt args to rsync |
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| 78 | typeset -r RSYNC_opt="-Lt -v" |
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| 79 | # RSYNC_opt args to "remote rsync" |
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| 80 | # ie storage filesystem |
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| 81 | typeset -r RHOST=gaya.idris.fr |
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| 82 | typeset -r REMOTE_RSYNC=/u/rech/ces/rces452/RSYNC/bin/rsync |
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| 83 | |
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| 84 | #==================================================== |
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[305] | 85 | # Set environment tools (ferret, nco, cdo) |
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[56] | 86 | #==================================================== |
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[305] | 87 | . /home/rech/psl/rpsl035/.atlas_env_ulam_bash |
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[55] | 88 | |
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| 89 | #==================================================== |
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| 90 | # Host specific DIRECTORIES |
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| 91 | #==================================================== |
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| 92 | |
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| 93 | #==================================================== |
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| 94 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 95 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 96 | |
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| 97 | #==================================================== |
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| 98 | #- SUBMIT_DIR : submission dir |
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[58] | 99 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LOADL_STEP_INITDIR}} |
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[55] | 100 | |
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| 101 | #==================================================== |
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[725] | 102 | #- IN |
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| 103 | typeset -r R_IN=${R_IN:=/u/rech/psl/rpsl035/IGCM} |
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| 104 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/u/rech/psl/rpsl376} |
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| 105 | |
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| 106 | #==================================================== |
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[55] | 107 | #- ARCHIVE |
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[619] | 108 | # modified 17/10/2011 /u to be used for file stored on gaya |
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| 109 | if (tty -s ) then |
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| 110 | typeset -r ARCHIVE=${HOMEGAYA} |
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| 111 | else |
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| 112 | typeset -r ARCHIVE=$(echo ${HOMEGAYA}|sed 's,/homegaya/,/u/',) |
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[506] | 113 | fi |
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[55] | 114 | |
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| 115 | #==================================================== |
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| 116 | #- OUT |
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| 117 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 118 | |
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| 119 | #==================================================== |
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[633] | 120 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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| 121 | typeset -r R_FIG=${ARCHIVE}/IGCM_OUT |
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| 122 | |
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| 123 | #==================================================== |
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[619] | 124 | #- R_BUF Buffer to pack files stored on Master |
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| 125 | typeset -r R_BUF=${WORKDIR}/IGCM_OUT |
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| 126 | |
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| 127 | #==================================================== |
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[55] | 128 | #- OUT_POST |
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| 129 | typeset -r R_OUT_POST=${WORKDIR}/IGCM_OUT |
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| 130 | |
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| 131 | #==================================================== |
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| 132 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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| 133 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${TMPDIR}} |
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| 134 | |
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[61] | 135 | #==================================================== |
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| 136 | #- Max number of arguments passed to nco operator or demigration command |
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[502] | 137 | UNIX_MAX_LIMIT=120 |
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[61] | 138 | |
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[55] | 139 | #D-#================================================== |
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[725] | 140 | #D-function IGCM_sys_ChangeArchive |
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| 141 | #D-* Purpose: Just a dummy call on this machine |
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| 142 | #D-* Examples: |
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| 143 | #D- |
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| 144 | function IGCM_sys_ChangeArchive { |
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| 145 | |
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| 146 | IGCM_debug_Print 1 " dummy function : IGCM_sys_ChangeArchive " |
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| 147 | |
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| 148 | } |
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| 149 | |
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| 150 | #D-#================================================== |
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[55] | 151 | #D-function IGCM_sys_RshMaster |
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| 152 | #D-* Purpose: Master rsh command |
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| 153 | #D-* Examples: |
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| 154 | #D- |
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| 155 | function IGCM_sys_RshMaster { |
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| 156 | #set -vx |
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[619] | 157 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 158 | rsh ${MASTER} exec /bin/ksh <<-EOF |
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[55] | 159 | export libIGCM=${libIGCM_SX} |
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[98] | 160 | export DEBUG_debug=${DEBUG_debug} |
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[55] | 161 | . ${libIGCM_SX}/libIGCM_debug/libIGCM_debug.ksh |
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| 162 | . ${libIGCM_SX}/libIGCM_card/libIGCM_card.ksh |
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| 163 | ${@} |
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| 164 | EOF |
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[619] | 165 | if [ $? -gt 0 ] ; then |
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| 166 | echo "IGCM_sys_RshMaster : erreur." |
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| 167 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 168 | fi |
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| 169 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[55] | 170 | } |
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| 171 | |
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| 172 | #D-#================================================== |
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| 173 | #D-function IGCM_sys_RshArchive |
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| 174 | #D-* Purpose: Archive rsh command |
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| 175 | #D-* Examples: |
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| 176 | #D- |
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| 177 | function IGCM_sys_RshArchive { |
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[619] | 178 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 179 | /bin/ksh <<-EOF |
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[55] | 180 | ${@} |
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| 181 | EOF |
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[619] | 182 | if [ $? -gt 0 ] ; then |
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| 183 | echo "IGCM_sys_RshArchive : erreur." |
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| 184 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 185 | fi |
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| 186 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[55] | 187 | } |
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| 188 | |
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| 189 | #D-#================================================== |
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| 190 | #D-function IGCM_sys_RshPost |
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| 191 | #D-* Purpose: Master rsh command |
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| 192 | #D-* Examples: |
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| 193 | #D- |
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| 194 | function IGCM_sys_RshPost { |
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[619] | 195 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 196 | if ( $DEBUG_sys ) ; then |
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| 197 | echo "IGCM_sys_RshPost :" $@ |
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| 198 | fi |
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| 199 | /bin/ksh ${@} |
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| 200 | if [ $? -gt 0 ] ; then |
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| 201 | echo "IGCM_sys_RshPost : erreur." |
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| 202 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 203 | fi |
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| 204 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[55] | 205 | } |
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| 206 | |
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| 207 | #D-#================================================== |
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[452] | 208 | #D-function IGCM_sys_SendMail |
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| 209 | #D-* Purpose: Send mail when simulation is over |
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| 210 | #D-* Examples: |
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| 211 | #D- |
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| 212 | function IGCM_sys_SendMail { |
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[619] | 213 | IGCM_debug_PushStack "IGCM_sys_SendMailPost" $@ |
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| 214 | if ( $DEBUG_sys ) ; then |
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| 215 | echo "IGCM_sys_SendMail :" $@ |
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| 216 | fi |
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[452] | 217 | |
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[619] | 218 | if ( ${ExitFlag} ) ; then |
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| 219 | status=failed |
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| 220 | else |
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| 221 | status=completed |
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| 222 | fi |
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| 223 | cat << END_MAIL > job_end.mail |
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[452] | 224 | Dear ${LOGIN}, |
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| 225 | |
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| 226 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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| 227 | Job started : ${DateBegin} |
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| 228 | Job ended : ${DateEnd} |
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| 229 | Output files are available in ${R_SAVE} |
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| 230 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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| 231 | END_MAIL |
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| 232 | |
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[619] | 233 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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| 234 | mailx -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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| 235 | elif [ -f ~/.forward ] ; then |
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| 236 | mailx -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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| 237 | fi |
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[452] | 238 | |
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[619] | 239 | if [ $? -gt 0 ] ; then |
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| 240 | echo "IGCM_sys_SendMail : erreur." |
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| 241 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 242 | fi |
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| 243 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[452] | 244 | } |
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| 245 | |
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| 246 | #D-#================================================== |
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[55] | 247 | #D-function IGCM_sys_Mkdir |
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| 248 | #D-* Purpose: Master locale mkdir command |
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| 249 | #D-* Examples: |
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| 250 | #D- |
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| 251 | function IGCM_sys_Mkdir { |
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[619] | 252 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 253 | if ( $DEBUG_sys ) ; then |
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| 254 | echo "IGCM_sys_Mkdir :" $@ |
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| 255 | fi |
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| 256 | if [ ! -d ${1} ]; then |
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| 257 | \mkdir -p $1 |
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| 258 | if [ $? -gt 0 ] ; then |
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| 259 | echo "IGCM_sys_Mkdir : erreur." |
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| 260 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[55] | 261 | fi |
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[619] | 262 | fi |
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[55] | 263 | # vérification : |
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[619] | 264 | if [ ! -d ${1} ] ; then |
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| 265 | echo "IGCM_sys_Mkdir : erreur." |
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| 266 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 267 | fi |
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| 268 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[55] | 269 | } |
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| 270 | |
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| 271 | #D-#================================================== |
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| 272 | #D-function IGCM_sys_MkdirArchive |
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| 273 | #D-* Purpose: Mkdir on Archive |
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| 274 | #D-* Examples: |
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| 275 | #D- |
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| 276 | function IGCM_sys_MkdirArchive { |
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[619] | 277 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 278 | if ( $DEBUG_sys ) ; then |
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| 279 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 280 | fi |
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[55] | 281 | #- creation de repertoire sur le serveur fichier |
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[619] | 282 | if [ ! -d ${1} ]; then |
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| 283 | \mkdir -p $1 |
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| 284 | if [ $? -gt 0 ] ; then |
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| 285 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 286 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[55] | 287 | fi |
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[619] | 288 | fi |
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| 289 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[55] | 290 | } |
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| 291 | |
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| 292 | #D-#================================================== |
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| 293 | #D-function IGCM_sys_MkdirWork |
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| 294 | #D-* Purpose: Mkdir on Work |
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| 295 | #D-* Examples: |
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| 296 | #D- |
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| 297 | function IGCM_sys_MkdirWork { |
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[619] | 298 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 299 | if ( $DEBUG_sys ) ; then |
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| 300 | echo "IGCM_sys_MkdirWork :" $@ |
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| 301 | fi |
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[55] | 302 | #- creation de repertoire sur le serveur fichier |
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[619] | 303 | if [ ! -d ${1} ]; then |
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| 304 | \mkdir -p $1 |
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| 305 | if [ $? -gt 0 ] ; then |
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| 306 | echo "IGCM_sys_MkdirWork : erreur." |
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| 307 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
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[55] | 308 | fi |
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[619] | 309 | fi |
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| 310 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
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[55] | 311 | } |
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| 312 | |
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| 313 | #D-#================================================== |
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| 314 | #D-function IGCM_sys_Cd |
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| 315 | #D-* Purpose: master cd command |
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| 316 | #D-* Examples: |
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| 317 | #D- |
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| 318 | function IGCM_sys_Cd { |
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[619] | 319 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
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| 320 | if ( $DEBUG_sys ) ; then |
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| 321 | echo "IGCM_sys_Cd :" $@ |
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| 322 | fi |
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| 323 | \cd $1 |
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| 324 | if [ $? -gt 0 ] ; then |
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| 325 | echo "IGCM_sys_Cd : erreur." |
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| 326 | IGCM_debug_Exit "IGCM_sys_Cd" |
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| 327 | fi |
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| 328 | IGCM_debug_PopStack "IGCM_sys_Cd" |
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[55] | 329 | } |
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| 330 | |
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| 331 | #D-#================================================== |
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| 332 | #D-function IGCM_sys_Chmod |
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| 333 | #D-* Purpose: Chmod |
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| 334 | #D-* Examples: |
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| 335 | #D- |
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| 336 | function IGCM_sys_Chmod { |
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[619] | 337 | IGCM_debug_PushStack "IGCM_sys_Chmod" $@ |
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| 338 | if ( $DEBUG_sys ) ; then |
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| 339 | echo "IGCM_sys_Chmod :" $@ |
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| 340 | fi |
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| 341 | if [ $DRYRUN -le 1 ]; then |
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| 342 | \chmod $@ |
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| 343 | if [ $? -gt 0 ] ; then |
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| 344 | echo "IGCM_sys_Chmod : erreur." |
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| 345 | IGCM_debug_Exit "IGCM_sys_Chmod" |
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[55] | 346 | fi |
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[619] | 347 | else |
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| 348 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
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| 349 | fi |
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| 350 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
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[55] | 351 | } |
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| 352 | |
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| 353 | #D-#================================================== |
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| 354 | #D-function IGCM_sys_FileSize |
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| 355 | #D-* Purpose: Filesize |
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| 356 | #D-* Examples: |
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| 357 | #D- |
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| 358 | function IGCM_sys_FileSize { |
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[619] | 359 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
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[55] | 360 | |
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[619] | 361 | typeset sizeF |
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| 362 | set +A sizeF -- $( ls -la ${1} ) |
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| 363 | if [ $? -gt 0 ] ; then |
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| 364 | IGCM_debug_Exit "IGCM_sys_FileSize" |
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| 365 | fi |
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| 366 | eval ${2}=${sizeF[4]} |
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[55] | 367 | |
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[619] | 368 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
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[55] | 369 | } |
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| 370 | |
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| 371 | #D-#================================================== |
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| 372 | #D-function IGCM_sys_TestDir |
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| 373 | #D-* Purpose: Test Directory that must exists |
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| 374 | #D-* Examples: |
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| 375 | #D- |
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| 376 | function IGCM_sys_TestDir { |
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[619] | 377 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
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| 378 | if ( $DEBUG_sys ) ; then |
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| 379 | echo "IGCM_sys_TestDir :" $@ |
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| 380 | fi |
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| 381 | typeset ExistFlag |
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| 382 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
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| 383 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
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[67] | 384 | |
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[619] | 385 | return ${ExistFlag} |
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[55] | 386 | } |
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| 387 | |
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| 388 | #D-#================================================== |
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| 389 | #D-function IGCM_sys_TestDirArchive |
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| 390 | #D-* Purpose: Test Directory that must exists on Archive |
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| 391 | #D-* Examples: |
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| 392 | #D- |
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| 393 | function IGCM_sys_TestDirArchive { |
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[619] | 394 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
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| 395 | if ( $DEBUG_sys ) ; then |
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| 396 | echo "IGCM_sys_TestDirArchive :" $@ |
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| 397 | fi |
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| 398 | typeset ExistFlag DirNameToTest |
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| 399 | # modified 17/10/2011 /u is not known on ulam, use /homegaya instead to test dir locally on ulam |
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| 400 | DirNameToTest=$(echo $1 | sed 's,/u/,/homegaya/,') |
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| 401 | ExistFlag=$( [ -d ${DirNameToTest} ] && echo 0 || echo 1 ) |
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| 402 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
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[67] | 403 | |
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[619] | 404 | return ${ExistFlag} |
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[55] | 405 | } |
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| 406 | |
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| 407 | #D-#================================================== |
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| 408 | #D-function IGCM_sys_TestFileArchive |
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| 409 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
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| 410 | #D-* Examples: |
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| 411 | #D- |
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| 412 | function IGCM_sys_TestFileArchive { |
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[619] | 413 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
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| 414 | typeset ExistFlag FileNameToTest |
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[645] | 415 | # modified 17/10/2011 /u is not known on ulam, use /homegaya instead to test dir locally on ulam |
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[619] | 416 | FileNameToTest=$(echo $1 | sed 's,/u/,/homegaya/,') |
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| 417 | ExistFlag=$( IGCM_sys_RshArchive "[ -f ${FileNameToTest} ] && echo 0 || echo 1" ) |
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| 418 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
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[55] | 419 | |
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[619] | 420 | return ${ExistFlag} |
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[67] | 421 | } |
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| 422 | |
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| 423 | #D-#================================================== |
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| 424 | #D-function IGCM_sys_CountFileArchive |
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| 425 | #D-* Purpose: Count files on Archive filesystem |
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| 426 | #D-* Examples: |
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| 427 | #D- |
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| 428 | function IGCM_sys_CountFileArchive { |
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[619] | 429 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
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| 430 | IGCM_sys_RshArchive "ls ${@} 2>/dev/null | wc -l" |
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| 431 | if [ $? -gt 0 ] ; then |
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| 432 | echo "IGCM_sys_CountFileArchive : erreur." |
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| 433 | fi |
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| 434 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
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[55] | 435 | } |
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| 436 | |
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| 437 | #D-#================================================== |
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| 438 | #D-function IGCM_sys_Tree |
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| 439 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
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| 440 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
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| 441 | #D- |
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| 442 | function IGCM_sys_Tree { |
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[619] | 443 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
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| 444 | if ( $DEBUG_sys ) ; then |
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| 445 | echo "IGCM_sys_Tree :" $@ |
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| 446 | fi |
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[55] | 447 | |
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[619] | 448 | \mfls -r $@ |
---|
[55] | 449 | |
---|
[619] | 450 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[55] | 451 | } |
---|
| 452 | |
---|
| 453 | #D-#================================================== |
---|
| 454 | #D-function IGCM_sys_Tar |
---|
| 455 | #D-* Purpose: master un-tar command |
---|
| 456 | #D-* Examples: |
---|
| 457 | #D- |
---|
| 458 | function IGCM_sys_Tar { |
---|
[619] | 459 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 460 | if ( $DEBUG_sys ) ; then |
---|
| 461 | echo "IGCM_sys_Tar :" $@ |
---|
| 462 | fi |
---|
| 463 | \tar cvf $@ |
---|
| 464 | if [ $? -gt 0 ] ; then |
---|
| 465 | echo "IGCM_sys_Tar : erreur." |
---|
| 466 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 467 | fi |
---|
| 468 | \tar tvf $1 |
---|
[55] | 469 | |
---|
[619] | 470 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[55] | 471 | } |
---|
| 472 | |
---|
| 473 | #D-#================================================== |
---|
| 474 | #D-function IGCM_sys_UnTar |
---|
| 475 | #D-* Purpose: master un-tar command |
---|
| 476 | #D-* Examples: |
---|
| 477 | #D- |
---|
| 478 | function IGCM_sys_UnTar { |
---|
[619] | 479 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 480 | if ( $DEBUG_sys ) ; then |
---|
| 481 | echo "IGCM_sys_UnTar :" $@ |
---|
| 482 | fi |
---|
| 483 | \tar xvf $1 |
---|
| 484 | if [ $? -gt 0 ] ; then |
---|
| 485 | echo "IGCM_sys_UnTar : erreur." |
---|
| 486 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 487 | fi |
---|
| 488 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[55] | 489 | } |
---|
| 490 | |
---|
| 491 | #D-#================================================== |
---|
| 492 | #D-function IGCM_sys_QsubPost |
---|
| 493 | #D-* Purpose: Qsub new job on scalaire |
---|
| 494 | #D-* Examples: |
---|
| 495 | #D- |
---|
| 496 | function IGCM_sys_QsubPost { |
---|
[619] | 497 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 498 | if ( $DEBUG_sys ) ; then |
---|
| 499 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 500 | fi |
---|
| 501 | cd ${POST_DIR} |
---|
| 502 | /opt/ibmll/LoadL/full/bin/llsubmit ${libIGCM}/$1.job |
---|
| 503 | cd - |
---|
| 504 | if [ $? -gt 0 ] ; then |
---|
| 505 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 506 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 507 | fi |
---|
| 508 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[55] | 509 | } |
---|
| 510 | |
---|
| 511 | #D-************************* |
---|
[619] | 512 | #D- File transfer functions |
---|
[55] | 513 | #D-************************* |
---|
| 514 | #D- |
---|
| 515 | |
---|
| 516 | #D-#================================================== |
---|
| 517 | #D-function IGCM_sys_Rsync_out |
---|
| 518 | #D-* Purpose: treat return val of rsync |
---|
| 519 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 520 | #D- Error values and explanations can depend on your system version. |
---|
| 521 | function IGCM_sys_Rsync_out { |
---|
[719] | 522 | status=$1 |
---|
| 523 | if [ ! $status ] ; then |
---|
[619] | 524 | echo "rsync error !" |
---|
| 525 | fi |
---|
[55] | 526 | |
---|
[619] | 527 | if [ $MYLANG = "fr" ]; then |
---|
[719] | 528 | case $status in |
---|
[619] | 529 | 0) return ;; |
---|
| 530 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 531 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 532 | return;; |
---|
| 533 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 534 | echo "Incompatibilité de protocole." |
---|
| 535 | return;; |
---|
| 536 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 537 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 538 | echo "répertoires" |
---|
| 539 | return;; |
---|
| 540 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
[622] | 541 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 542 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 543 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 544 | echo "pas par le serveur a été spécifiée." |
---|
| 545 | return;; |
---|
| 546 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 547 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 548 | return;; |
---|
| 549 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 550 | echo "Erreur d'entrée sortie fichier" |
---|
| 551 | return;; |
---|
| 552 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 553 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 554 | return;; |
---|
| 555 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 556 | echo "Erreur avec les diagnostics du programme" |
---|
| 557 | return;; |
---|
| 558 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 559 | echo "Erreur dans le code IPC" |
---|
| 560 | return;; |
---|
| 561 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 562 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 563 | return;; |
---|
| 564 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 565 | echo "Une erreur retournée par waitpid()" |
---|
| 566 | return;; |
---|
| 567 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 568 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 569 | return;; |
---|
| 570 | 23) echo "" |
---|
| 571 | echo "Erreur fichier inexistant" |
---|
| 572 | return;; |
---|
| 573 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 574 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 575 | return;; |
---|
[719] | 576 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $status |
---|
[622] | 577 | return;; |
---|
| 578 | esac |
---|
| 579 | elif [ $MYLANG = "en" ] ; then |
---|
[719] | 580 | case $status in |
---|
[622] | 581 | 0) return;; |
---|
| 582 | 1) echo "rsync error : Syntax or usage error " |
---|
| 583 | return;; |
---|
| 584 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 585 | return;; |
---|
| 586 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 587 | return;; |
---|
| 588 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 589 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 590 | echo "them; or an option was specified that is supported by the client and" |
---|
| 591 | echo "not by the server." |
---|
| 592 | return;; |
---|
| 593 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 594 | return;; |
---|
| 595 | 10) echo "rsync error : Error in socket I/O " |
---|
| 596 | return;; |
---|
| 597 | 11) echo "rsync error : Error in file I/O " |
---|
| 598 | return;; |
---|
| 599 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 600 | return;; |
---|
| 601 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 602 | return;; |
---|
| 603 | 14) echo "rsync error : Error in IPC code " |
---|
| 604 | return;; |
---|
| 605 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 606 | return;; |
---|
| 607 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 608 | return;; |
---|
| 609 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 610 | return;; |
---|
| 611 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 612 | return;; |
---|
| 613 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 614 | return;; |
---|
| 615 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 616 | return;; |
---|
[719] | 617 | *) echo "rsync error : return code of rsync unknown :" $status |
---|
[622] | 618 | return;; |
---|
| 619 | esac |
---|
| 620 | else |
---|
| 621 | echo "unknown language $MYLANG." |
---|
| 622 | return |
---|
| 623 | fi |
---|
[55] | 624 | } |
---|
[619] | 625 | |
---|
[55] | 626 | #D-#================================================== |
---|
| 627 | #D-function IGCM_sys_Cp |
---|
| 628 | #D-* Purpose: generic cp |
---|
| 629 | #D-* Examples: |
---|
| 630 | #D- |
---|
| 631 | function IGCM_sys_Cp { |
---|
[619] | 632 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 633 | if ( $DEBUG_sys ) ; then |
---|
| 634 | echo "IGCM_sys_Cp :" $@ |
---|
| 635 | fi |
---|
[55] | 636 | |
---|
[719] | 637 | typeset status |
---|
[55] | 638 | |
---|
[619] | 639 | echo cp $@ > out_rsync 2>&1 |
---|
| 640 | \cp $@ >> out_rsync 2>&1 |
---|
[719] | 641 | status=$? |
---|
[55] | 642 | |
---|
[719] | 643 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 644 | echo "IGCM_sys_Cp : error." |
---|
| 645 | cat out_rsync |
---|
| 646 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 647 | fi |
---|
| 648 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[55] | 649 | } |
---|
| 650 | |
---|
| 651 | #D-#================================================== |
---|
| 652 | #D-function IGCM_sys_Rm |
---|
| 653 | #D-* Purpose: generic rm |
---|
| 654 | #D-* Examples: |
---|
| 655 | #D- |
---|
| 656 | function IGCM_sys_Rm { |
---|
[619] | 657 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 658 | if ( $DEBUG_sys ) ; then |
---|
| 659 | echo "IGCM_sys_Rm :" $@ |
---|
| 660 | fi |
---|
[55] | 661 | |
---|
[719] | 662 | typeset status |
---|
[55] | 663 | |
---|
[619] | 664 | echo rm $@ > out_rsync 2>&1 |
---|
| 665 | \rm $@ >> out_rsync 2>&1 |
---|
[719] | 666 | status=$? |
---|
[55] | 667 | |
---|
[719] | 668 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 669 | echo "IGCM_sys_Rm : error." |
---|
| 670 | cat out_rsync |
---|
| 671 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 672 | fi |
---|
| 673 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[55] | 674 | } |
---|
| 675 | |
---|
| 676 | #D-#================================================== |
---|
[203] | 677 | #D-function IGCM_sys_RmRunDir |
---|
| 678 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 679 | #D- scheduler will do the job) |
---|
| 680 | #D-* Examples: |
---|
| 681 | #D- |
---|
| 682 | function IGCM_sys_RmRunDir { |
---|
[619] | 683 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 684 | if ( $DEBUG_sys ) ; then |
---|
| 685 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 686 | echo "Dummy call, let the scheduler do that." |
---|
| 687 | fi |
---|
| 688 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[203] | 689 | } |
---|
| 690 | |
---|
| 691 | #D-#================================================== |
---|
[55] | 692 | #D-function IGCM_sys_Mv |
---|
| 693 | #D-* Purpose: generic move |
---|
| 694 | #D-* Examples: |
---|
| 695 | #D- |
---|
| 696 | function IGCM_sys_Mv { |
---|
[619] | 697 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 698 | if ( $DEBUG_sys ) ; then |
---|
| 699 | echo "IGCM_sys_Mv :" $@ |
---|
| 700 | fi |
---|
[192] | 701 | |
---|
[619] | 702 | if [ $DRYRUN = 0 ]; then |
---|
[55] | 703 | |
---|
[719] | 704 | typeset status |
---|
[619] | 705 | |
---|
| 706 | echo mv $@ > out_rsync 2>&1 |
---|
| 707 | \mv $@ >> out_rsync 2>&1 |
---|
[719] | 708 | status=$? |
---|
[619] | 709 | |
---|
[719] | 710 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 711 | echo "IGCM_sys_Mv : error in mv." |
---|
| 712 | cat out_rsync |
---|
| 713 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[55] | 714 | fi |
---|
[619] | 715 | else |
---|
| 716 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 717 | fi |
---|
[55] | 718 | |
---|
[619] | 719 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[55] | 720 | } |
---|
| 721 | |
---|
| 722 | #D-#================================================== |
---|
| 723 | #D-function IGCM_sys_Put_Dir |
---|
| 724 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 725 | #D-* Examples: |
---|
| 726 | #D- |
---|
| 727 | function IGCM_sys_Put_Dir { |
---|
[619] | 728 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 729 | if ( $DEBUG_sys ) ; then |
---|
| 730 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 731 | fi |
---|
| 732 | if [ $DRYRUN = 0 ]; then |
---|
| 733 | if [ ! -d ${1} ] ; then |
---|
| 734 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 735 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 736 | return |
---|
[55] | 737 | fi |
---|
| 738 | |
---|
[719] | 739 | typeset status |
---|
[55] | 740 | |
---|
[622] | 741 | # Only if we use rsync |
---|
| 742 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 743 | # |
---|
| 744 | #USUAL WAY |
---|
[619] | 745 | rcp -r $1 gaya:$2 > out_rsync 2>&1 |
---|
[719] | 746 | status=$? |
---|
[55] | 747 | |
---|
[719] | 748 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 749 | echo "IGCM_sys_Put_Dir : error." |
---|
| 750 | cat out_rsync |
---|
| 751 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
| 752 | fi |
---|
[134] | 753 | |
---|
[622] | 754 | # due to rcommand latency |
---|
[619] | 755 | sleep 10 |
---|
[134] | 756 | |
---|
[619] | 757 | else |
---|
| 758 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 759 | fi |
---|
| 760 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[55] | 761 | } |
---|
| 762 | |
---|
| 763 | #D-#================================================== |
---|
| 764 | #D-function IGCM_sys_Get_Dir |
---|
| 765 | #D-* Purpose: Copy a complete directory from $(ARCHIVE) |
---|
| 766 | #D-* Examples: |
---|
| 767 | #D- |
---|
| 768 | function IGCM_sys_Get_Dir { |
---|
[619] | 769 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 770 | if ( $DEBUG_sys ) ; then |
---|
| 771 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 772 | fi |
---|
| 773 | if [ $DRYRUN = 0 ]; then |
---|
[622] | 774 | |
---|
[59] | 775 | # if [ ! -d ${1} ] ; then |
---|
[619] | 776 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 777 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 778 | # return |
---|
[59] | 779 | # fi |
---|
[55] | 780 | |
---|
[719] | 781 | typeset status |
---|
[55] | 782 | |
---|
[622] | 783 | #USUAL WAY |
---|
[619] | 784 | rcp -rp gaya:$1 $2 > out_rsync 2>&1 |
---|
[719] | 785 | status=$? |
---|
[55] | 786 | |
---|
[719] | 787 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 788 | echo "IGCM_sys_Get_Dir : error." |
---|
| 789 | cat out_rsync |
---|
| 790 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[55] | 791 | fi |
---|
[619] | 792 | else |
---|
| 793 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 794 | fi |
---|
| 795 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[55] | 796 | } |
---|
| 797 | |
---|
| 798 | #D-#================================================== |
---|
| 799 | #D-function IGCM_sys_Get_Master |
---|
| 800 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 801 | #D-* Examples: |
---|
| 802 | #D- |
---|
| 803 | function IGCM_sys_Get_Master { |
---|
[619] | 804 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 805 | if ( $DEBUG_sys ) ; then |
---|
| 806 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 807 | fi |
---|
| 808 | if [ $DRYRUN = 0 ]; then |
---|
[675] | 809 | TEST=$( IGCM_sys_RshMaster [ -d $1 ] || [ -f $1 ] && echo 1 || echo 0 ) |
---|
[619] | 810 | if [ ${TEST} -ne 1 ] ; then |
---|
| 811 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ON ${MASTER}." |
---|
| 812 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 813 | return |
---|
[55] | 814 | fi |
---|
| 815 | |
---|
[719] | 816 | typeset status |
---|
[55] | 817 | |
---|
[622] | 818 | #USUAL WAY |
---|
[619] | 819 | rcp -r ${MASTER}:$1 $2 > out_rsync 2>&1 |
---|
[719] | 820 | status=$? |
---|
[55] | 821 | |
---|
[719] | 822 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 823 | echo "IGCM_sys_Get_Master : error." |
---|
| 824 | cat out_rsync |
---|
| 825 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[55] | 826 | fi |
---|
[619] | 827 | else |
---|
| 828 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 829 | fi |
---|
| 830 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[55] | 831 | } |
---|
| 832 | |
---|
| 833 | #D-#================================================== |
---|
| 834 | #D-function IGCM_sys_Put_Out |
---|
| 835 | #D-* Purpose: Copy a file on $(ARCHIVE) after have chmod it in readonly |
---|
| 836 | #D-* Examples: |
---|
| 837 | #D- |
---|
| 838 | function IGCM_sys_Put_Out { |
---|
[619] | 839 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 840 | if ( $DEBUG_sys ) ; then |
---|
| 841 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 842 | fi |
---|
| 843 | if [ $DRYRUN = 0 ]; then |
---|
| 844 | if [ ! -f ${1} ] ; then |
---|
| 845 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 846 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 847 | return 1 |
---|
[55] | 848 | fi |
---|
| 849 | |
---|
[719] | 850 | typeset status |
---|
[619] | 851 | # |
---|
| 852 | if [ X${JobType} = XRUN ] ; then |
---|
| 853 | if [ X${3} = X ] ; then |
---|
| 854 | IGCM_sys_Chmod 444 ${1} |
---|
| 855 | fi |
---|
| 856 | fi |
---|
[622] | 857 | # |
---|
| 858 | # |
---|
| 859 | # USUAL WAY |
---|
[619] | 860 | mfput $1 $2 > out_rsync 2>&1 |
---|
[719] | 861 | status=$? |
---|
[55] | 862 | |
---|
[619] | 863 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 864 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} > out_rsync 2>&1 |
---|
| 865 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RUN_DIR}/$1 ${RHOST}:${2} >> out_rsync 2>&1 |
---|
[55] | 866 | |
---|
[619] | 867 | # #RSYNC WITH NFS USE |
---|
| 868 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 869 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[55] | 870 | |
---|
[719] | 871 | # status=$? |
---|
| 872 | # IGCM_sys_Rsync_out $status |
---|
[55] | 873 | |
---|
[619] | 874 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[719] | 875 | # (( status=status+$? )) |
---|
[55] | 876 | |
---|
[719] | 877 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 878 | echo "IGCM_sys_Put_Out : error." |
---|
| 879 | cat out_rsync |
---|
| 880 | IGCM_debug_Print 1 "mfput failed. Make a second try :" |
---|
| 881 | # |
---|
| 882 | mfput $1 $2 > out_rsync 2>&1 |
---|
[719] | 883 | status=$? |
---|
[619] | 884 | # |
---|
[719] | 885 | if [ ${status} -gt 0 ] ; then |
---|
[619] | 886 | echo "IGCM_sys_Put_Out : error." |
---|
| 887 | IGCM_debug_Print 1 "mfput failed twice. You have a problem" |
---|
| 888 | cat out_rsync |
---|
| 889 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
| 890 | fi |
---|
[55] | 891 | fi |
---|
[619] | 892 | else |
---|
| 893 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 894 | fi |
---|
| 895 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 896 | return 0 |
---|
[55] | 897 | } |
---|
| 898 | |
---|
| 899 | #D-#================================================== |
---|
| 900 | #D-function IGCM_sys_Get |
---|
| 901 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 902 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 903 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 904 | function IGCM_sys_Get { |
---|
[619] | 905 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[55] | 906 | |
---|
[719] | 907 | typeset DEST status dm_liste ifile target |
---|
[55] | 908 | |
---|
[619] | 909 | if ( $DEBUG_sys ) ; then |
---|
| 910 | echo "IGCM_sys_Get :" $@ |
---|
| 911 | fi |
---|
| 912 | if [ $DRYRUN -le 2 ]; then |
---|
| 913 | if [ X${1} = X'/l' ] ; then |
---|
[622] | 914 | # test if the first file is present in the old computation : |
---|
[619] | 915 | eval set +A dm_liste \${${2}} |
---|
| 916 | else |
---|
| 917 | dm_liste=${1} |
---|
[55] | 918 | fi |
---|
[619] | 919 | eval DEST=\${${#}} |
---|
[55] | 920 | |
---|
[622] | 921 | # test if the (first) file is present in the old computation : |
---|
| 922 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
[719] | 923 | status=$? |
---|
| 924 | if [ ${status} -gt 0 ] ; then |
---|
[622] | 925 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 926 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 927 | #IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 928 | #return |
---|
| 929 | fi |
---|
[55] | 930 | |
---|
[622] | 931 | # SD : dm_liste is not suited for computing job |
---|
| 932 | # because we change filename during transfert |
---|
| 933 | # dm_liste is better suited for post-treatment |
---|
| 934 | # SD : dm_liste necessary only with RSYNC |
---|
[55] | 935 | |
---|
[622] | 936 | #dm_liste=" " |
---|
| 937 | #(( ifile=1 )) |
---|
| 938 | #while [ $ifile -lt $# ] ; do |
---|
| 939 | # dm_liste=$( eval echo ${dm_liste[*]} " "\${${ifile}} ) |
---|
| 940 | # (( ifile = ifile + 1 )) |
---|
| 941 | #done |
---|
| 942 | #DEST=$( eval echo \${${#}} ) |
---|
[55] | 943 | |
---|
[622] | 944 | #USUAL WAY |
---|
| 945 | mfget ${dm_liste[*]} ${DEST} > out_rsync 2>&1 |
---|
[55] | 946 | |
---|
[622] | 947 | # #RSYNC WITH NETWORK RSH CALL |
---|
| 948 | # echo ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 949 | # ${RSYNC} ${RSYNC_opt} --rsync-path=${REMOTE_RSYNC} -e rsh ${RHOST}:"${dm_liste}" ${RHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[55] | 950 | |
---|
[622] | 951 | # #RSYNC WITH NFS USE |
---|
| 952 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 953 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[55] | 954 | |
---|
[719] | 955 | # status=$? |
---|
| 956 | # IGCM_sys_Rsync_out $status |
---|
[55] | 957 | |
---|
[622] | 958 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
[719] | 959 | # (( status=status+$? )) |
---|
[55] | 960 | |
---|
[619] | 961 | else |
---|
| 962 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 963 | fi |
---|
| 964 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[622] | 965 | } |
---|
[55] | 966 | |
---|
| 967 | #D-#================================================== |
---|
| 968 | #D-function IGCM_sys_Put_Dods |
---|
| 969 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 970 | #D-* Examples: |
---|
| 971 | #D- |
---|
[622] | 972 | function IGCM_sys_Put_Dods { |
---|
| 973 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 974 | if ( $DEBUG_sys ) ; then |
---|
| 975 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 976 | fi |
---|
| 977 | if [ $DRYRUN = 0 ]; then |
---|
| 978 | # We take our time on that |
---|
| 979 | sleep 10 |
---|
| 980 | IGCM_sys_TestDirArchive ${R_SAVE}/${1} |
---|
| 981 | if [ $? != 0 ] ; then |
---|
| 982 | echo "WARNING : IGCM_sys_Put_Dods ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 983 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 984 | return |
---|
| 985 | fi |
---|
[55] | 986 | |
---|
[719] | 987 | typeset status |
---|
[622] | 988 | # |
---|
| 989 | rsh gaya exec /bin/ksh <<EOF |
---|
[619] | 990 | cd ${R_SAVE} |
---|
| 991 | /usr/local/bin/dods_rm DODS/pub/${LOGIN}/${R_DODS}/${1} > /dev/null 2>&1 |
---|
| 992 | /bin/chmod -R u+w ${R_SAVE}/${1} |
---|
| 993 | /usr/local/bin/dods_cp ${1} DODS/pub/${LOGIN}/${R_DODS} > /dev/null 2>&1 |
---|
| 994 | /bin/chmod -R +rX ${R_SAVE}/${1} |
---|
| 995 | /bin/chmod -R u+w ${R_SAVE}/${1} |
---|
[622] | 996 | EOF |
---|
[719] | 997 | status=$? |
---|
[55] | 998 | |
---|
[719] | 999 | if [ ${status} -gt 0 ] ; then |
---|
[622] | 1000 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1001 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1002 | fi |
---|
| 1003 | else |
---|
| 1004 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1005 | fi |
---|
| 1006 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1007 | } |
---|
[55] | 1008 | |
---|
| 1009 | ############################################################## A FINIR !! |
---|
| 1010 | |
---|
| 1011 | #D-#================================================== |
---|
| 1012 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1013 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1014 | #D-* Examples: |
---|
| 1015 | #D- |
---|
[622] | 1016 | function IGCM_sys_GetDate_FichWork { |
---|
| 1017 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1018 | if ( $DEBUG_sys ) ; then |
---|
| 1019 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1020 | fi |
---|
[55] | 1021 | # donne la date filesys d'un fichier sur la machine work |
---|
[622] | 1022 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
| 1023 | } |
---|
[55] | 1024 | |
---|
| 1025 | #D-#================================================== |
---|
| 1026 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[619] | 1027 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[55] | 1028 | #D-* Examples: |
---|
| 1029 | #D- |
---|
[622] | 1030 | function IGCM_sys_GetDate_FichArchive { |
---|
| 1031 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1032 | if ( $DEBUG_sys ) ; then |
---|
| 1033 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1034 | fi |
---|
| 1035 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1036 | } |
---|
[55] | 1037 | |
---|
| 1038 | ############################################################## |
---|
| 1039 | # REBUILD OPERATOR |
---|
| 1040 | |
---|
[622] | 1041 | function IGCM_sys_rebuild { |
---|
| 1042 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1043 | if ( $DEBUG_sys ) ; then |
---|
| 1044 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1045 | fi |
---|
| 1046 | /home/rech/psl/rpsl035/bin/rebuild -f -o $@ |
---|
| 1047 | if [ $? -gt 0 ] ; then |
---|
| 1048 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1049 | IGCM_debug_Exit "rebuild" |
---|
| 1050 | fi |
---|
[55] | 1051 | |
---|
[622] | 1052 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
| 1053 | } |
---|
[697] | 1054 | |
---|
| 1055 | function IGCM_sys_rebuild_station { |
---|
| 1056 | IGCM_debug_PushStack "IGCM_sys_rebuild_station" -- $@ |
---|
| 1057 | typeset i list_opt file_in file_out prefix_invert list_invert |
---|
| 1058 | if ( $DEBUG_sys ) ; then |
---|
| 1059 | echo "IGCM_sys_rebuild_station :" $@ |
---|
| 1060 | fi |
---|
| 1061 | list_opt=$@ |
---|
| 1062 | |
---|
| 1063 | # Invert Axis : t,x -> x,t |
---|
| 1064 | # t,pres,x -> x,t,pres |
---|
| 1065 | # So that we can concatenate along x |
---|
| 1066 | i=0 |
---|
| 1067 | for file_in in ${list_opt} ; do |
---|
| 1068 | (( i = i + 1)) |
---|
| 1069 | [ ${i} = 1 ] && file_out=${file_in} && continue |
---|
| 1070 | prefix_invert=$( basename ${file_in} .nc ) |
---|
| 1071 | IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs ${file_in} ${prefix_invert}_xt.nc |
---|
| 1072 | list_invert[${#list_invert[*]}]=${prefix_invert}_xt.nc |
---|
| 1073 | done |
---|
| 1074 | |
---|
| 1075 | # Concatenate |
---|
| 1076 | IGCM_sys_ncrcat ${list_invert[*]} histstn_xt.nc |
---|
| 1077 | |
---|
| 1078 | # Re-ivert file |
---|
| 1079 | IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x histstn_xt.nc ${file_out} |
---|
| 1080 | |
---|
| 1081 | # Station re-ordering is too expansive to be run within libICGM |
---|
| 1082 | # This is due to (ncpdq - nrcat - ncpdq) I/O sequence. |
---|
| 1083 | # This re-ordering must be done "in memory" by the cmorization process |
---|
| 1084 | # Anyway this is the best sequence using (ncpdq - nrcat - ncpdq) |
---|
| 1085 | # BEGIN reordering |
---|
| 1086 | |
---|
| 1087 | # Only LMDZ text output contains the exact ordering of the station. |
---|
| 1088 | # We isolate this in the code below: |
---|
| 1089 | # 0 38 -157.5000000000000 70.98591549295774 |
---|
| 1090 | # 0 54 27.49999999999999 67.18309859154928 |
---|
| 1091 | # 0 56 -62.50000000000001 82.39436619718309 |
---|
| 1092 | # 0 79 12.49999999999999 78.59154929577466 |
---|
| 1093 | # 0 116 -165.0000000000000 76.05633802816901 |
---|
| 1094 | # 0 117 130.0000000000000 70.98591549295774 |
---|
| 1095 | # 0 118 110.0000000000000 87.46478873239437 |
---|
| 1096 | # 1 40 4.999999999999995 51.97183098591550 |
---|
| 1097 | # typeset iStation iProc list_opt file_in file_out prefix_invert |
---|
| 1098 | # typeset -Z4 j4 |
---|
| 1099 | # typeset -Z3 j3 |
---|
| 1100 | |
---|
| 1101 | # unset list_opt |
---|
| 1102 | # set +A list_opt $@ |
---|
| 1103 | |
---|
| 1104 | # Filename after rebuild |
---|
| 1105 | # file_out=${list_opt[0]} |
---|
| 1106 | # Prefix of output files |
---|
| 1107 | # prefix_invert=$( basename ${file_out} .nc ) |
---|
| 1108 | # Number of procs |
---|
| 1109 | # num_proc=$( grep -i mpi_size ${PREFIX}_${Exe_Output} | wc -l ) |
---|
| 1110 | |
---|
| 1111 | # iProc=0 |
---|
| 1112 | # while [ ${iProc} -lt ${num_proc} ] ; do |
---|
| 1113 | # Array containing Station as a number |
---|
| 1114 | # unset proc_stn |
---|
| 1115 | # set +A proc_stn $( grep "iophy_mpi rank ip lon lat $iProc" ${PREFIX}_${Exe_Output} | sed -e "s/iophy_mpi rank ip lon lat //g" | awk ' {print $2}' ) |
---|
| 1116 | # Number of stations produced by processor proc |
---|
| 1117 | # stationLast=${#proc_stn[*]} |
---|
| 1118 | # Proc number on 4 digits |
---|
| 1119 | # j4=${iProc} |
---|
| 1120 | # Init |
---|
| 1121 | # iStation=0 |
---|
| 1122 | # while [ ${iStation} -lt ${stationLast} ] ; do |
---|
| 1123 | # Station number on 3 digits |
---|
| 1124 | # j3=${proc_stn[${iStation}]} |
---|
| 1125 | # Extract station |
---|
| 1126 | # Invert Axis : t,x -> x,t |
---|
| 1127 | # t,pres,x -> x,t,pres |
---|
| 1128 | # So that we can concatenate along x |
---|
| 1129 | # IGCM_sys_ncpdq -a x,time_counter -a x,time_counter,presnivs -d x,$iStation,$iStation ${prefix_invert}_${j4}.nc ${prefix_invert}_stn_${j3}.nc |
---|
| 1130 | # (( iStation = iStation + 1 )) |
---|
| 1131 | # done |
---|
| 1132 | # (( iProc = iProc + 1 )) |
---|
| 1133 | # done |
---|
| 1134 | |
---|
| 1135 | # Concatenate all station along x |
---|
| 1136 | # IGCM_sys_ncrcat ${prefix_invert}_stn_???.nc ${prefix_invert}_xt.nc |
---|
| 1137 | |
---|
| 1138 | # Re-invert file |
---|
| 1139 | # IGCM_sys_ncpdq -a time_counter,x -a time_counter,presnivs,x ${prefix_invert}_xt.nc ${file_out} |
---|
| 1140 | |
---|
| 1141 | # END reordering |
---|
| 1142 | |
---|
| 1143 | IGCM_debug_PopStack "IGCM_sys_rebuild_station" |
---|
| 1144 | } |
---|
| 1145 | |
---|
[55] | 1146 | ############################################################## |
---|
| 1147 | # NCO OPERATOR |
---|
| 1148 | |
---|
[622] | 1149 | function IGCM_sys_ncap2 { |
---|
| 1150 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 1151 | if ( $DEBUG_sys ) ; then |
---|
| 1152 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 1153 | fi |
---|
[714] | 1154 | |
---|
| 1155 | typeset NB_ESSAI DELAI status i |
---|
| 1156 | # number of tentative |
---|
| 1157 | NB_ESSAI=3 |
---|
| 1158 | # time delay between tentative |
---|
| 1159 | DELAI=2 |
---|
| 1160 | |
---|
| 1161 | i=0 |
---|
| 1162 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1163 | ncap2 "$@" > out_rsync 2>&1 |
---|
| 1164 | status=$? |
---|
| 1165 | if [ ${status} -gt 0 ] ; then |
---|
| 1166 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : error code ${status}" |
---|
| 1167 | cat out_rsync |
---|
| 1168 | \rm out_rsync |
---|
| 1169 | IGCM_debug_Print 2 "IGCM_sys_ncap2 : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1170 | else |
---|
| 1171 | \rm out_rsync |
---|
| 1172 | break |
---|
| 1173 | fi |
---|
| 1174 | (( i = i + 1 )) |
---|
| 1175 | done |
---|
| 1176 | |
---|
| 1177 | if [ ${status} -gt 0 ] ; then |
---|
| 1178 | echo "IGCM_sys_ncap2 : ncap2 error" |
---|
| 1179 | IGCM_debug_Exit "ncap2" |
---|
[622] | 1180 | fi |
---|
[55] | 1181 | |
---|
[622] | 1182 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
| 1183 | } |
---|
[55] | 1184 | |
---|
[622] | 1185 | function IGCM_sys_ncatted { |
---|
| 1186 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 1187 | if ( $DEBUG_sys ) ; then |
---|
| 1188 | echo "IGCM_sys_ncatted :" $@ |
---|
| 1189 | fi |
---|
[714] | 1190 | |
---|
| 1191 | typeset NB_ESSAI DELAI status i |
---|
| 1192 | # number of tentative |
---|
| 1193 | NB_ESSAI=3 |
---|
| 1194 | # time delay between tentative |
---|
| 1195 | DELAI=2 |
---|
| 1196 | |
---|
| 1197 | i=0 |
---|
| 1198 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1199 | ncatted "$@" > out_rsync 2>&1 |
---|
| 1200 | status=$? |
---|
| 1201 | if [ ${status} -gt 0 ] ; then |
---|
| 1202 | IGCM_debug_Print 2 "IGCM_sys_ncatted : error code ${status}" |
---|
| 1203 | cat out_rsync |
---|
| 1204 | \rm out_rsync |
---|
| 1205 | IGCM_debug_Print 2 "IGCM_sys_ncatted : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1206 | else |
---|
| 1207 | \rm out_rsync |
---|
| 1208 | break |
---|
| 1209 | fi |
---|
| 1210 | (( i = i + 1 )) |
---|
| 1211 | done |
---|
| 1212 | |
---|
| 1213 | if [ ${status} -gt 0 ] ; then |
---|
| 1214 | echo "IGCM_sys_ncatted : ncatted error" |
---|
| 1215 | IGCM_debug_Exit "ncatted" |
---|
[622] | 1216 | fi |
---|
[55] | 1217 | |
---|
[622] | 1218 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
| 1219 | } |
---|
[55] | 1220 | |
---|
[622] | 1221 | function IGCM_sys_ncbo { |
---|
| 1222 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 1223 | if ( $DEBUG_sys ) ; then |
---|
| 1224 | echo "IGCM_sys_ncbo :" $@ |
---|
| 1225 | fi |
---|
[714] | 1226 | |
---|
| 1227 | typeset NB_ESSAI DELAI status i |
---|
| 1228 | # number of tentative |
---|
| 1229 | NB_ESSAI=3 |
---|
| 1230 | # time delay between tentative |
---|
| 1231 | DELAI=2 |
---|
| 1232 | |
---|
| 1233 | i=0 |
---|
| 1234 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1235 | ncbo $@ > out_rsync 2>&1 |
---|
| 1236 | status=$? |
---|
| 1237 | if [ ${status} -gt 0 ] ; then |
---|
| 1238 | IGCM_debug_Print 2 "IGCM_sys_ncbo : error code ${status}" |
---|
| 1239 | cat out_rsync |
---|
| 1240 | \rm out_rsync |
---|
| 1241 | IGCM_debug_Print 2 "IGCM_sys_ncbo : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1242 | else |
---|
| 1243 | \rm out_rsync |
---|
| 1244 | break |
---|
| 1245 | fi |
---|
| 1246 | (( i = i + 1 )) |
---|
| 1247 | done |
---|
| 1248 | |
---|
| 1249 | if [ ${status} -gt 0 ] ; then |
---|
| 1250 | echo "IGCM_sys_ncbo : ncbo error" |
---|
| 1251 | IGCM_debug_Exit "ncbo" |
---|
[622] | 1252 | fi |
---|
[55] | 1253 | |
---|
[622] | 1254 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
| 1255 | } |
---|
[55] | 1256 | |
---|
[622] | 1257 | function IGCM_sys_ncdiff { |
---|
| 1258 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 1259 | if ( $DEBUG_sys ) ; then |
---|
| 1260 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 1261 | fi |
---|
[714] | 1262 | |
---|
| 1263 | typeset NB_ESSAI DELAI status i |
---|
| 1264 | # number of tentative |
---|
| 1265 | NB_ESSAI=3 |
---|
| 1266 | # time delay between tentative |
---|
| 1267 | DELAI=2 |
---|
| 1268 | |
---|
| 1269 | i=0 |
---|
| 1270 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1271 | ncdiff $@ > out_rsync 2>&1 |
---|
| 1272 | status=$? |
---|
| 1273 | if [ ${status} -gt 0 ] ; then |
---|
| 1274 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : error code ${status}" |
---|
| 1275 | cat out_rsync |
---|
| 1276 | \rm out_rsync |
---|
| 1277 | IGCM_debug_Print 2 "IGCM_sys_ncdiff : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1278 | else |
---|
| 1279 | \rm out_rsync |
---|
| 1280 | break |
---|
| 1281 | fi |
---|
| 1282 | (( i = i + 1 )) |
---|
| 1283 | done |
---|
| 1284 | |
---|
| 1285 | if [ ${status} -gt 0 ] ; then |
---|
| 1286 | echo "IGCM_sys_ncdiff : ncdiff error" |
---|
| 1287 | IGCM_debug_Exit "ncdiff" |
---|
[622] | 1288 | fi |
---|
[55] | 1289 | |
---|
[622] | 1290 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
| 1291 | } |
---|
[55] | 1292 | |
---|
[622] | 1293 | function IGCM_sys_ncea { |
---|
| 1294 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 1295 | if ( $DEBUG_sys ) ; then |
---|
| 1296 | echo "IGCM_sys_ncea :" $@ |
---|
| 1297 | fi |
---|
[714] | 1298 | |
---|
| 1299 | typeset NB_ESSAI DELAI status i |
---|
| 1300 | # number of tentative |
---|
| 1301 | NB_ESSAI=3 |
---|
| 1302 | # time delay between tentative |
---|
| 1303 | DELAI=2 |
---|
| 1304 | |
---|
| 1305 | i=0 |
---|
| 1306 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1307 | ncea $@ > out_rsync 2>&1 |
---|
| 1308 | status=$? |
---|
| 1309 | if [ ${status} -gt 0 ] ; then |
---|
| 1310 | IGCM_debug_Print 2 "IGCM_sys_ncea : error code ${status}" |
---|
| 1311 | cat out_rsync |
---|
| 1312 | \rm out_rsync |
---|
| 1313 | IGCM_debug_Print 2 "IGCM_sys_ncea : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1314 | else |
---|
| 1315 | \rm out_rsync |
---|
| 1316 | break |
---|
| 1317 | fi |
---|
| 1318 | (( i = i + 1 )) |
---|
| 1319 | done |
---|
| 1320 | |
---|
| 1321 | if [ ${status} -gt 0 ] ; then |
---|
| 1322 | echo "IGCM_sys_ncea : ncea error" |
---|
| 1323 | IGCM_debug_Exit "ncea" |
---|
[622] | 1324 | fi |
---|
[55] | 1325 | |
---|
[622] | 1326 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
| 1327 | } |
---|
[55] | 1328 | |
---|
[622] | 1329 | function IGCM_sys_ncecat { |
---|
| 1330 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 1331 | if ( $DEBUG_sys ) ; then |
---|
| 1332 | echo "IGCM_sys_ncecat :" $@ |
---|
| 1333 | fi |
---|
[714] | 1334 | |
---|
| 1335 | typeset NB_ESSAI DELAI status i |
---|
| 1336 | # number of tentative |
---|
| 1337 | NB_ESSAI=3 |
---|
| 1338 | # time delay between tentative |
---|
| 1339 | DELAI=2 |
---|
| 1340 | |
---|
| 1341 | i=0 |
---|
| 1342 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1343 | ncecat $@ > out_rsync 2>&1 |
---|
| 1344 | status=$? |
---|
| 1345 | if [ ${status} -gt 0 ] ; then |
---|
| 1346 | IGCM_debug_Print 2 "IGCM_sys_ncecat : error code ${status}" |
---|
| 1347 | cat out_rsync |
---|
| 1348 | \rm out_rsync |
---|
| 1349 | IGCM_debug_Print 2 "IGCM_sys_ncecat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1350 | else |
---|
| 1351 | \rm out_rsync |
---|
| 1352 | break |
---|
| 1353 | fi |
---|
| 1354 | (( i = i + 1 )) |
---|
| 1355 | done |
---|
| 1356 | |
---|
| 1357 | if [ ${status} -gt 0 ] ; then |
---|
| 1358 | echo "IGCM_sys_ncecat : ncecat error" |
---|
| 1359 | IGCM_debug_Exit "ncecat" |
---|
[622] | 1360 | fi |
---|
[55] | 1361 | |
---|
[622] | 1362 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
| 1363 | } |
---|
[55] | 1364 | |
---|
[622] | 1365 | function IGCM_sys_ncflint { |
---|
| 1366 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 1367 | if ( $DEBUG_sys ) ; then |
---|
| 1368 | echo "IGCM_sys_ncflint :" $@ |
---|
| 1369 | fi |
---|
[714] | 1370 | |
---|
| 1371 | typeset NB_ESSAI DELAI status i |
---|
| 1372 | # number of tentative |
---|
| 1373 | NB_ESSAI=3 |
---|
| 1374 | # time delay between tentative |
---|
| 1375 | DELAI=2 |
---|
| 1376 | |
---|
| 1377 | i=0 |
---|
| 1378 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1379 | ncflint $@ > out_rsync 2>&1 |
---|
| 1380 | status=$? |
---|
| 1381 | if [ ${status} -gt 0 ] ; then |
---|
| 1382 | IGCM_debug_Print 2 "IGCM_sys_ncflint : error code ${status}" |
---|
| 1383 | cat out_rsync |
---|
| 1384 | \rm out_rsync |
---|
| 1385 | IGCM_debug_Print 2 "IGCM_sys_ncflint : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1386 | else |
---|
| 1387 | \rm out_rsync |
---|
| 1388 | break |
---|
| 1389 | fi |
---|
| 1390 | (( i = i + 1 )) |
---|
| 1391 | done |
---|
| 1392 | |
---|
| 1393 | if [ ${status} -gt 0 ] ; then |
---|
| 1394 | echo "IGCM_sys_ncflint : ncflint error" |
---|
| 1395 | IGCM_debug_Exit "ncflint" |
---|
[622] | 1396 | fi |
---|
[55] | 1397 | |
---|
[622] | 1398 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
| 1399 | } |
---|
[55] | 1400 | |
---|
[622] | 1401 | function IGCM_sys_ncks { |
---|
| 1402 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 1403 | if ( $DEBUG_sys ) ; then |
---|
| 1404 | echo "IGCM_sys_ncks :" $@ |
---|
| 1405 | fi |
---|
[714] | 1406 | |
---|
| 1407 | typeset NB_ESSAI DELAI status i |
---|
| 1408 | # number of tentative |
---|
| 1409 | NB_ESSAI=3 |
---|
| 1410 | # time delay between tentative |
---|
| 1411 | DELAI=2 |
---|
| 1412 | |
---|
| 1413 | i=0 |
---|
| 1414 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1415 | ncks $@ > out_rsync 2>&1 |
---|
| 1416 | status=$? |
---|
| 1417 | if [ ${status} -gt 0 ] ; then |
---|
| 1418 | IGCM_debug_Print 2 "IGCM_sys_ncks : error code ${status}" |
---|
| 1419 | cat out_rsync |
---|
| 1420 | \rm out_rsync |
---|
| 1421 | IGCM_debug_Print 2 "IGCM_sys_ncks : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1422 | else |
---|
| 1423 | \rm out_rsync |
---|
| 1424 | break |
---|
| 1425 | fi |
---|
| 1426 | (( i = i + 1 )) |
---|
| 1427 | done |
---|
| 1428 | |
---|
| 1429 | if [ ${status} -gt 0 ] ; then |
---|
| 1430 | echo "IGCM_sys_ncks : ncks error" |
---|
| 1431 | IGCM_debug_Exit "ncks" |
---|
[622] | 1432 | fi |
---|
[55] | 1433 | |
---|
[622] | 1434 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
| 1435 | } |
---|
[55] | 1436 | |
---|
[622] | 1437 | function IGCM_sys_ncpdq { |
---|
| 1438 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 1439 | if ( $DEBUG_sys ) ; then |
---|
| 1440 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 1441 | fi |
---|
[714] | 1442 | |
---|
| 1443 | typeset NB_ESSAI DELAI status i |
---|
| 1444 | # number of tentative |
---|
| 1445 | NB_ESSAI=3 |
---|
| 1446 | # time delay between tentative |
---|
| 1447 | DELAI=2 |
---|
| 1448 | |
---|
| 1449 | i=0 |
---|
| 1450 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1451 | ncpdq $@ > out_rsync 2>&1 |
---|
| 1452 | status=$? |
---|
| 1453 | if [ ${status} -gt 0 ] ; then |
---|
| 1454 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : error code ${status}" |
---|
| 1455 | cat out_rsync |
---|
| 1456 | \rm out_rsync |
---|
| 1457 | IGCM_debug_Print 2 "IGCM_sys_ncpdq : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1458 | else |
---|
| 1459 | \rm out_rsync |
---|
| 1460 | break |
---|
| 1461 | fi |
---|
| 1462 | (( i = i + 1 )) |
---|
| 1463 | done |
---|
| 1464 | |
---|
| 1465 | if [ ${status} -gt 0 ] ; then |
---|
| 1466 | echo "IGCM_sys_ncpdq : ncpdq error" |
---|
| 1467 | IGCM_debug_Exit "ncpdq" |
---|
[622] | 1468 | fi |
---|
[55] | 1469 | |
---|
[622] | 1470 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
| 1471 | } |
---|
[55] | 1472 | |
---|
[622] | 1473 | function IGCM_sys_ncra { |
---|
| 1474 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 1475 | if ( $DEBUG_sys ) ; then |
---|
| 1476 | echo "IGCM_sys_ncra :" $@ |
---|
| 1477 | fi |
---|
[714] | 1478 | |
---|
| 1479 | typeset NB_ESSAI DELAI status i |
---|
| 1480 | # number of tentative |
---|
| 1481 | NB_ESSAI=3 |
---|
| 1482 | # time delay between tentative |
---|
| 1483 | DELAI=2 |
---|
| 1484 | |
---|
| 1485 | i=0 |
---|
| 1486 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1487 | ncra $@ > out_rsync 2>&1 |
---|
| 1488 | status=$? |
---|
| 1489 | if [ ${status} -gt 0 ] ; then |
---|
| 1490 | IGCM_debug_Print 2 "IGCM_sys_ncra : error code ${status}" |
---|
| 1491 | cat out_rsync |
---|
| 1492 | \rm out_rsync |
---|
| 1493 | IGCM_debug_Print 2 "IGCM_sys_ncra : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1494 | else |
---|
| 1495 | \rm out_rsync |
---|
| 1496 | break |
---|
| 1497 | fi |
---|
| 1498 | (( i = i + 1 )) |
---|
| 1499 | done |
---|
| 1500 | |
---|
| 1501 | if [ ${status} -gt 0 ] ; then |
---|
| 1502 | echo "IGCM_sys_ncra : ncra error" |
---|
| 1503 | IGCM_debug_Exit "ncra" |
---|
[622] | 1504 | fi |
---|
[55] | 1505 | |
---|
[622] | 1506 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
| 1507 | } |
---|
[55] | 1508 | |
---|
[622] | 1509 | function IGCM_sys_ncrcat { |
---|
| 1510 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 1511 | if ( $DEBUG_sys ) ; then |
---|
| 1512 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 1513 | fi |
---|
[714] | 1514 | |
---|
| 1515 | typeset NB_ESSAI DELAI status i |
---|
| 1516 | # number of tentative |
---|
| 1517 | NB_ESSAI=3 |
---|
| 1518 | # time delay between tentative |
---|
| 1519 | DELAI=2 |
---|
| 1520 | |
---|
| 1521 | i=0 |
---|
| 1522 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1523 | ncrcat $@ > out_rsync 2>&1 |
---|
| 1524 | status=$? |
---|
| 1525 | if [ ${status} -gt 0 ] ; then |
---|
| 1526 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : error code ${status}" |
---|
| 1527 | cat out_rsync |
---|
| 1528 | \rm out_rsync |
---|
| 1529 | IGCM_debug_Print 2 "IGCM_sys_ncrcat : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1530 | else |
---|
| 1531 | \rm out_rsync |
---|
| 1532 | break |
---|
| 1533 | fi |
---|
| 1534 | (( i = i + 1 )) |
---|
| 1535 | done |
---|
| 1536 | |
---|
| 1537 | if [ ${status} -gt 0 ] ; then |
---|
| 1538 | echo "IGCM_sys_ncrcat : ncrcat error" |
---|
| 1539 | #IGCM_debug_Exit "ncrcat" |
---|
[622] | 1540 | fi |
---|
[55] | 1541 | |
---|
[622] | 1542 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
| 1543 | } |
---|
[55] | 1544 | |
---|
[622] | 1545 | function IGCM_sys_ncrename { |
---|
| 1546 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 1547 | if ( $DEBUG_sys ) ; then |
---|
| 1548 | echo "IGCM_sys_ncrename :" $@ |
---|
| 1549 | fi |
---|
[714] | 1550 | |
---|
| 1551 | typeset NB_ESSAI DELAI status i |
---|
| 1552 | # number of tentative |
---|
| 1553 | NB_ESSAI=3 |
---|
| 1554 | # time delay between tentative |
---|
| 1555 | DELAI=2 |
---|
| 1556 | |
---|
| 1557 | i=0 |
---|
| 1558 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1559 | ncrename $@ > out_rsync 2>&1 |
---|
| 1560 | status=$? |
---|
| 1561 | if [ ${status} -gt 0 ] ; then |
---|
| 1562 | IGCM_debug_Print 2 "IGCM_sys_ncrename : error code ${status}" |
---|
| 1563 | cat out_rsync |
---|
| 1564 | \rm out_rsync |
---|
| 1565 | IGCM_debug_Print 2 "IGCM_sys_ncrename : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1566 | else |
---|
| 1567 | \rm out_rsync |
---|
| 1568 | break |
---|
| 1569 | fi |
---|
| 1570 | (( i = i + 1 )) |
---|
| 1571 | done |
---|
| 1572 | |
---|
| 1573 | if [ ${status} -gt 0 ] ; then |
---|
| 1574 | echo "IGCM_sys_ncrename : ncrename error" |
---|
| 1575 | IGCM_debug_Exit "ncrename" |
---|
[622] | 1576 | fi |
---|
[55] | 1577 | |
---|
[622] | 1578 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
| 1579 | } |
---|
[55] | 1580 | |
---|
[622] | 1581 | function IGCM_sys_ncwa { |
---|
| 1582 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 1583 | if ( $DEBUG_sys ) ; then |
---|
| 1584 | echo "IGCM_sys_ncwa :" $@ |
---|
| 1585 | fi |
---|
[714] | 1586 | |
---|
| 1587 | typeset NB_ESSAI DELAI status i |
---|
| 1588 | # number of tentative |
---|
| 1589 | NB_ESSAI=3 |
---|
| 1590 | # time delay between tentative |
---|
| 1591 | DELAI=2 |
---|
| 1592 | |
---|
| 1593 | i=0 |
---|
| 1594 | while [ $i -lt $NB_ESSAI ] ; do |
---|
| 1595 | ncwa $@ > out_rsync 2>&1 |
---|
| 1596 | status=$? |
---|
| 1597 | if [ ${status} -gt 0 ] ; then |
---|
| 1598 | IGCM_debug_Print 2 "IGCM_sys_ncwa : error code ${status}" |
---|
| 1599 | cat out_rsync |
---|
| 1600 | \rm out_rsync |
---|
| 1601 | IGCM_debug_Print 2 "IGCM_sys_ncwa : ${i}/${NB_ESSAI} sleep ${DELAI} seconds and try again." |
---|
| 1602 | else |
---|
| 1603 | \rm out_rsync |
---|
| 1604 | break |
---|
| 1605 | fi |
---|
| 1606 | (( i = i + 1 )) |
---|
| 1607 | done |
---|
| 1608 | |
---|
| 1609 | if [ ${status} -gt 0 ] ; then |
---|
| 1610 | echo "IGCM_sys_ncwa : ncwa error" |
---|
| 1611 | IGCM_debug_Exit "ncwa" |
---|
[622] | 1612 | fi |
---|
[55] | 1613 | |
---|
[622] | 1614 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
| 1615 | } |
---|
[55] | 1616 | |
---|
[285] | 1617 | ############################################################## |
---|
| 1618 | # CDO OPERATOR |
---|
| 1619 | |
---|
[622] | 1620 | function IGCM_sys_cdo { |
---|
| 1621 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
[714] | 1622 | if ( $DEBUG_sys ) ; then |
---|
| 1623 | echo "IGCM_sys_cdo :" $@ |
---|
| 1624 | fi |
---|
[285] | 1625 | |
---|
[714] | 1626 | typeset status |
---|
| 1627 | |
---|
| 1628 | \cdo $@ > out_rsync 2>&1 |
---|
| 1629 | status=$? |
---|
| 1630 | if [ ${status} -gt 0 ] ; then |
---|
| 1631 | echo "IGCM_sys_cdo : error code ${status}" |
---|
| 1632 | cat out_rsync |
---|
| 1633 | \rm out_rsync |
---|
[622] | 1634 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1635 | return 1 |
---|
| 1636 | else |
---|
| 1637 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1638 | return 0 |
---|
| 1639 | fi |
---|
[285] | 1640 | |
---|
[622] | 1641 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 1642 | } |
---|
[285] | 1643 | |
---|
[55] | 1644 | ############################################################ |
---|
| 1645 | # Activate Running Environnment Variables |
---|
| 1646 | |
---|
[622] | 1647 | function IGCM_sys_activ_variables { |
---|
| 1648 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1649 | if ( $DEBUG_sys ) ; then |
---|
| 1650 | echo "IGCM_sys_activ_variables" |
---|
| 1651 | fi |
---|
| 1652 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
| 1653 | } |
---|
[55] | 1654 | |
---|
| 1655 | ############################################################ |
---|
| 1656 | # Desactivate Running Environnment Variables |
---|
| 1657 | |
---|
[622] | 1658 | function IGCM_sys_desactiv_variables { |
---|
| 1659 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1660 | if ( $DEBUG_sys ) ; then |
---|
| 1661 | echo "IGCM_sys_desactiv_variables" |
---|
| 1662 | fi |
---|
| 1663 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
| 1664 | } |
---|
[55] | 1665 | |
---|
| 1666 | ############################################################ |
---|
| 1667 | # Build run file |
---|
| 1668 | |
---|
[622] | 1669 | function IGCM_sys_build_run_file { |
---|
| 1670 | IGCM_debug_PushStack "IGCM_sys_build_run_file" |
---|
| 1671 | if ( $DEBUG_sys ) ; then |
---|
| 1672 | echo "IGCM_sys_build_run_file" |
---|
| 1673 | fi |
---|
| 1674 | IGCM_debug_PopStack "IGCM_sys_build_run_file" |
---|
| 1675 | } |
---|
[651] | 1676 | |
---|
| 1677 | ############################################################ |
---|
| 1678 | # Check of space available on temporary filesytems |
---|
| 1679 | function IGCM_sys_check_quota { |
---|
| 1680 | IGCM_debug_PushStack "IGCM_sys_check_quota" |
---|
| 1681 | if ( $DEBUG_sys ) ; then |
---|
| 1682 | echo "IGCM_sys_check_quota" |
---|
| 1683 | fi |
---|
| 1684 | IGCM_debug_PopStack "IGCM_sys_check_quota" |
---|
| 1685 | } |
---|