[222] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | #************************************************************** |
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[373] | 4 | # Author: Sebastien Denvil, Martial Mancip, Arnaud Caubel |
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| 5 | # Contact: Arnaud.Caubel__at__lsce.ipsl.fr |
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| 6 | # $Revision:: $ Revision of last commit |
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| 7 | # $Author:: $ Author of last commit |
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| 8 | # $Date:: $ Date of last commit |
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[222] | 9 | # IPSL (2006) |
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| 10 | # This software is governed by the CeCILL licence see libIGCM/libIGCM_CeCILL.LIC |
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| 11 | # |
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| 12 | #************************************************************** |
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| 13 | |
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| 14 | #========================================================= |
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| 15 | # The documentation of this file can be automatically generated |
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[623] | 16 | # if you use the prefix #D- for comments to be extracted. |
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[222] | 17 | # Extract with command: cat lib* | grep "^#D-" | cut -c "4-" |
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| 18 | #========================================================= |
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| 19 | |
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| 20 | #D-#================================================== |
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| 21 | #D-LibIGCM_sys for Titane |
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| 22 | #D-#================================================== |
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| 23 | #D- |
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[623] | 24 | #D- This ksh library if a layer under some usefull |
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[222] | 25 | #D-environment variables and shell commands. |
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| 26 | #D-All those definitions depend on host particularities. |
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| 27 | #D-It manages a stack mechanism and test validity of operations. |
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| 28 | #D-All function described bellow must be prefixed by IGCM_sys. |
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| 29 | |
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| 30 | #==================================================== |
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| 31 | # libIGCM_sys PARAMETERS |
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| 32 | #==================================================== |
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| 33 | |
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| 34 | #==================================================== |
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| 35 | # set DEBUG_sys to true to output calls of function |
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| 36 | typeset -r DEBUG_sys=${DEBUG_sys:=true} |
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| 37 | |
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| 38 | #==================================================== |
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| 39 | # Turn in dry run mode ? (sys_Put_Rest, sys_Put_Out, sys_Get) |
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| 40 | typeset -r DRYRUN=${DRYRUN:=0} |
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| 41 | |
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| 42 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 43 | # ------------------------------------------------------------------------------------- |
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[623] | 44 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 45 | # | | Cp/Exe param files | | Chmod | | |
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| 46 | # | | Qsub | | | | |
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[222] | 47 | # ------------------------------------------------------------------------------------- |
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[623] | 48 | # | 0 | yes | yes | yes | yes | |
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[222] | 49 | # ------------------------------------------------------------------------------------- |
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[623] | 50 | # | 1 | yes | yes | yes | no | |
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[222] | 51 | # ------------------------------------------------------------------------------------- |
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[623] | 52 | # | 2 | yes | yes | no | no | |
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[222] | 53 | # ------------------------------------------------------------------------------------- |
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[623] | 54 | # | 3 | yes | no | no | no | |
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[222] | 55 | # ------------------------------------------------------------------------------------- |
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| 56 | |
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| 57 | #===================================================== |
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| 58 | # Global Variables : |
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| 59 | #===================================================== |
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| 60 | # Language : "fr" or "en" |
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| 61 | typeset -r MYLANG="fr" |
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| 62 | |
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| 63 | #===================================================== |
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[245] | 64 | # Host and user names |
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| 65 | # $hostname ou hostname |
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| 66 | typeset HOST=${HOST:=$( hostname )} |
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[222] | 67 | # $username ou whoami |
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[245] | 68 | typeset LOGIN=${LOGIN:=$( whoami )} |
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[222] | 69 | # $hostname of the MASTER job |
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[544] | 70 | typeset MASTER=titane |
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[222] | 71 | |
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| 72 | #D- |
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| 73 | #D-#================================================== |
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| 74 | #D-Program used in libIGCM |
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| 75 | #D-#================================================== |
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| 76 | |
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| 77 | # rsync with path |
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| 78 | typeset -r RSYNC=/usr/bin/rsync |
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| 79 | # RSYNC_opt args to rsync |
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| 80 | typeset -r RSYNC_opt="-va" |
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| 81 | # ie storage filesystem |
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[538] | 82 | typeset -r STOREHOST=${MASTER} |
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[222] | 83 | |
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| 84 | #==================================================== |
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[451] | 85 | # Source default environment |
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| 86 | #==================================================== |
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| 87 | . /etc/profile |
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| 88 | |
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| 89 | #==================================================== |
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[305] | 90 | # Set environment tools (ferret, nco, cdo) |
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| 91 | #==================================================== |
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[451] | 92 | . /home/cont003/p86ipsl/.atlas_env_titane_ksh |
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[634] | 93 | if [ X${LSB_QUEUE} = Xmono ] ; then |
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| 94 | module switch nco/3.9.4 nco/3.9.4_netcdf4 |
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| 95 | fi |
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[222] | 96 | |
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| 97 | #==================================================== |
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| 98 | # Specific for ocean additionnal diagnostic |
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[451] | 99 | export FER_GO="$FER_GO /home/cont003/p86denv/IGCM_POST_UTIL/JNL /home/cont003/p86denv/GRAF /home/cont003/p86denv/GRAF/GO" |
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| 100 | export FER_PALETTE="$FER_PALETTE /home/cont003/p86denv/GRAF/PALET" |
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[222] | 101 | |
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| 102 | #==================================================== |
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| 103 | # Host specific DIRECTORIES |
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| 104 | #==================================================== |
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| 105 | |
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[544] | 106 | # ============ CESIUM START ============ # |
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| 107 | |
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[222] | 108 | #==================================================== |
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| 109 | #- Mirror libIGCM from titane to cesium if needed |
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[544] | 110 | #ROOTSYS=$( echo ${libIGCM} | gawk -F"/" '{print $3}' ) |
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| 111 | #if [ ! ${ROOTSYS} = "home" ] ; then |
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| 112 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=true} |
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| 113 | #else |
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| 114 | # typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 115 | #fi |
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[222] | 116 | |
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| 117 | #==================================================== |
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| 118 | #- libIGCM_POST |
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[544] | 119 | #if ( ${MirrorlibIGCM} ) ; then |
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| 120 | # PATHlibIGCM=$( echo ${libIGCM} | gawk -F"${LOGIN}/" '{print $2}' | sed -e "s&/libIGCM&&" ) |
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| 121 | # typeset -r libIGCM_POST=${HOME}/MIRROR/${PATHlibIGCM}/libIGCM |
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| 122 | #else |
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| 123 | # typeset -r libIGCM_POST=${libIGCM} |
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| 124 | #fi |
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[222] | 125 | |
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[544] | 126 | # ============ CESIUM END ============ # |
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| 127 | |
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[222] | 128 | #==================================================== |
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[544] | 129 | #- MirrorlibIGCM for frontend |
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| 130 | typeset -r MirrorlibIGCM=${MirrorlibIGCM:=false} |
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| 131 | |
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| 132 | #==================================================== |
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| 133 | #- libIGCM_POST for frontend |
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| 134 | typeset -r libIGCM_POST=${libIGCM} |
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| 135 | |
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| 136 | #==================================================== |
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[587] | 137 | #- R_EXE (==> BIN_DIR = ${MODIPSL}/bin ) |
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| 138 | typeset -r R_EXE="${MODIPSL}/bin" |
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| 139 | |
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| 140 | #==================================================== |
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| 141 | #- SUBMIT_DIR : submission dir |
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| 142 | typeset SUBMIT_DIR=${SUBMIT_DIR:=${LS_SUBCWD}} |
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| 143 | |
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| 144 | #==================================================== |
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| 145 | #- ARCHIVE (dedicated to large files) |
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| 146 | typeset -r ARCHIVE=${CCCSTOREDIR} |
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| 147 | |
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| 148 | #- ARCHIVE (dedicated to small/medium files) |
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| 149 | typeset -r STORAGE=${CCCWORKDIR} |
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| 150 | |
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| 151 | #==================================================== |
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[222] | 152 | #- IN |
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[545] | 153 | typeset -r R_IN=${R_IN:=/ccc/work/cont003/dsm/p86ipsl/IGCM} |
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[438] | 154 | typeset -r R_IN_ECMWF=${R_IN_ECMWF:=/dmnfs/cont003/p24data} |
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[222] | 155 | |
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| 156 | #==================================================== |
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[544] | 157 | #- R_OUT |
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[222] | 158 | typeset -r R_OUT=${ARCHIVE}/IGCM_OUT |
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| 159 | |
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| 160 | #==================================================== |
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[587] | 161 | #- R_FIG (hosting figures : monitoring and atlas, and/or small files) |
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| 162 | typeset -r R_FIG=${STORAGE}/IGCM_OUT |
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| 163 | |
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| 164 | #==================================================== |
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[544] | 165 | #- R_BUF (ONLY FOR double copy an scratch) |
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| 166 | typeset -r R_BUF=${SCRATCHDIR}/IGCM_OUT |
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[222] | 167 | |
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| 168 | #==================================================== |
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[544] | 169 | #- BIG_DIR : BIG_DIR to store files waiting for rebuild |
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| 170 | typeset -r BIG_DIR=${BIG_DIR:=${SCRATCHDIR}/REBUILD} |
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| 171 | |
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| 172 | #==================================================== |
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[222] | 173 | #- OUT_POST |
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| 174 | typeset -r R_OUT_POST=${SCRATCHDIR}/IGCM_OUT |
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| 175 | |
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| 176 | #==================================================== |
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| 177 | #- RUN_DIR_PATH : Temporary working directory (=> TMP) |
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[459] | 178 | if [ ! X${LSB_QUEUE} = Xmono ] ; then |
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[544] | 179 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/RUN_DIR/${LSB_JOBID}} |
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[459] | 180 | else |
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[544] | 181 | typeset -r RUN_DIR_PATH=${RUN_DIR_PATH:=${SCRATCHDIR}/TMPDIR_IGCM/${LSB_JOBID}} |
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[459] | 182 | fi |
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[222] | 183 | |
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| 184 | #==================================================== |
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| 185 | #- HOST_MPIRUN_COMMAND |
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| 186 | typeset -r HOST_MPIRUN_COMMAND=${HOST_MPIRUN_COMMAND:="time mpirun"} |
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| 187 | |
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| 188 | #==================================================== |
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| 189 | #- Max number of arguments passed to nco operator or demigration command |
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| 190 | UNIX_MAX_LIMIT=360 |
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| 191 | |
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[616] | 192 | #==================================================== |
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| 193 | #- set PackDefault true on titane |
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| 194 | PackDefault=true |
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| 195 | |
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| 196 | NUM_COREPERNODE=8 |
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[623] | 197 | |
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[616] | 198 | #==================================================== |
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| 199 | #- Default number of MPI task for IPSL coupled model |
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| 200 | #- required for backward compatibility |
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| 201 | #- |
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| 202 | DEFAULT_NUM_PROC_OCE=5 |
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| 203 | DEFAULT_NUM_PROC_CPL=1 |
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[637] | 204 | (( DEFAULT_NUM_PROC_ATM = BATCH_NUM_PROC_TOT - DEFAULT_NUM_PROC_OCE - DEFAULT_NUM_PROC_CPL )) |
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| 205 | DEFAULT_NUM_PROC_TOTAL=${BATCH_NUM_PROC_TOT} |
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[616] | 206 | |
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[637] | 207 | |
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[222] | 208 | #D-#================================================== |
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| 209 | #D-function IGCM_sys_RshMaster |
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[531] | 210 | #D-* Purpose: Connection to frontend machine. |
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[222] | 211 | #D-* Examples: |
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| 212 | #D- |
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| 213 | function IGCM_sys_RshMaster { |
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[544] | 214 | IGCM_debug_PushStack "IGCM_sys_RshMaster" $@ |
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| 215 | /bin/ksh <<-EOF |
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[222] | 216 | export libIGCM=${libIGCM} |
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| 217 | export DEBUG_debug=${DEBUG_debug} |
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| 218 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 219 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 220 | ${@} |
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| 221 | EOF |
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[544] | 222 | if [ $? -gt 0 ] ; then |
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| 223 | echo "IGCM_sys_RshMaster : erreur." |
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| 224 | IGCM_debug_Exit "IGCM_sys_RshMaster" |
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| 225 | fi |
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| 226 | IGCM_debug_PopStack "IGCM_sys_RshMaster" |
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[222] | 227 | } |
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| 228 | |
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| 229 | #D-#================================================== |
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| 230 | #D-function IGCM_sys_RshArchive |
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| 231 | #D-* Purpose: Archive rsh command |
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| 232 | #D-* Examples: |
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| 233 | #D- |
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| 234 | function IGCM_sys_RshArchive { |
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[544] | 235 | IGCM_debug_PushStack "IGCM_sys_RshArchive" $@ |
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| 236 | /bin/ksh <<-EOF |
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[222] | 237 | ${@} |
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| 238 | EOF |
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[544] | 239 | if [ $? -gt 0 ] ; then |
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| 240 | echo "IGCM_sys_RshArchive : erreur." |
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| 241 | IGCM_debug_Exit "IGCM_sys_RshArchive" |
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| 242 | fi |
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| 243 | IGCM_debug_PopStack "IGCM_sys_RshArchive" |
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[222] | 244 | } |
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| 245 | |
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| 246 | #D-#================================================== |
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| 247 | #D-function IGCM_sys_RshPost |
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| 248 | #D-* Purpose: Post-process rsh command |
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| 249 | #D-* Examples: |
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| 250 | #D- |
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| 251 | function IGCM_sys_RshPost { |
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[544] | 252 | IGCM_debug_PushStack "IGCM_sys_RshPost" $@ |
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| 253 | if ( $DEBUG_sys ) ; then |
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| 254 | echo "IGCM_sys_RshPost :" $@ |
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| 255 | fi |
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[324] | 256 | |
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[544] | 257 | #echo cat tmp_IGCM_sys_RshPost_$$ INITIAL |
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| 258 | #cat tmp_IGCM_sys_RshPost_$$ |
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| 259 | # keep standard input (stdin) for the loop onto temporary file |
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| 260 | cat >tmp_IGCM_sys_RshPost_$$ |
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[222] | 261 | |
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[544] | 262 | # ============ FRONTEND START ============ # |
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[451] | 263 | |
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[544] | 264 | /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 265 | if [ $? -gt 0 ] ; then |
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| 266 | echo "IGCM_sys_RshPost : erreur." |
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| 267 | IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 268 | fi |
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| 269 | # delete temporary file |
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| 270 | \rm tmp_IGCM_sys_RshPost_$$ |
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[451] | 271 | |
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[544] | 272 | # ============ FRONTEND END ============ # |
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| 273 | |
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| 274 | # ============ CESIUM START ============ # |
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| 275 | # typeset NB_ESSAI DELAI status i |
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| 276 | # if [ "X$( grep rebuild_from tmp_IGCM_sys_RshPost_$$ )" != "X" ] ; then |
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| 277 | # #little hack so that rebuild submission is done on titane not an cesium |
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[623] | 278 | # |
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[544] | 279 | # libIGCM_POST_sed=$( echo $libIGCM_POST | sed 's/\//\\\//g' ) |
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| 280 | # POST_DIR_sed=$( echo ${POST_DIR} | sed 's/\//\\\//g' ) |
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| 281 | # sed "s/IGCM_sys_QsubPost/IGCM_sys_Qsub/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 282 | # sed "s/ rebuild_fromWorkdir/ ${libIGCM_POST_sed}\/rebuild_fromWorkdir.job/g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 283 | # sed "s/ rebuild_fromArchive/ ${libIGCM_POST_sed}\/rebuild_fromArchive.job/g" tmp_IGCM_sys_RshPost_$$ > tmp.txt |
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| 284 | # sed "s/Script_Post_Output=/Script_Output=${POST_DIR_sed}\//g" tmp.txt > tmp_IGCM_sys_RshPost_$$ |
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| 285 | # \mv tmp.txt tmp_IGCM_sys_RshPost_$$ |
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[623] | 286 | # |
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[544] | 287 | # echo cat tmp_IGCM_sys_RshPost_$$ AFTER |
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| 288 | # cat tmp_IGCM_sys_RshPost_$$ |
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| 289 | # |
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| 290 | # /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 291 | # if [ $? -gt 0 ] ; then |
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| 292 | # echo "IGCM_sys_RshPost : erreur." |
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| 293 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 294 | # fi |
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| 295 | # # delete temporary file |
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| 296 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 297 | # |
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| 298 | # else |
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| 299 | # # number of tentative |
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| 300 | # NB_ESSAI=10 |
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| 301 | # # time delay between tentative |
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| 302 | # DELAI=10 |
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| 303 | # i=0 |
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| 304 | # while [ $i -ne $NB_ESSAI ] ; do |
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| 305 | # ssh -t titane996 ssh cesium /bin/ksh <tmp_IGCM_sys_RshPost_$$ |
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| 306 | # status=$? |
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| 307 | # if [ ${status} -ne 0 ]; |
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| 308 | # then |
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| 309 | # sleep $DELAI |
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| 310 | # else |
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| 311 | # break |
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| 312 | # fi |
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| 313 | # let i=$i+1 |
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| 314 | # done |
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| 315 | # # delete temporary file |
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| 316 | # \rm tmp_IGCM_sys_RshPost_$$ |
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| 317 | # |
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| 318 | # if [ ${status} -gt 0 ] ; then |
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| 319 | # echo "IGCM_sys_RshPost : erreur." |
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| 320 | # IGCM_debug_Exit "IGCM_sys_RshPost" |
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| 321 | # fi |
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| 322 | # fi |
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| 323 | |
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| 324 | # ============ CESIUM END ============ # |
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| 325 | |
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| 326 | IGCM_debug_PopStack "IGCM_sys_RshPost" |
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[222] | 327 | } |
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| 328 | |
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| 329 | #D-#================================================== |
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| 330 | #D-function IGCM_sys_SendMail |
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| 331 | #D-* Purpose: Send mail when simulation is over |
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| 332 | #D-* Examples: |
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| 333 | #D- |
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| 334 | function IGCM_sys_SendMail { |
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[544] | 335 | IGCM_debug_PushStack "IGCM_sys_SendMail" $@ |
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| 336 | if ( $DEBUG_sys ) ; then |
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| 337 | echo "IGCM_sys_SendMail :" $@ |
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| 338 | fi |
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[222] | 339 | |
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[544] | 340 | if ( ${ExitFlag} ) ; then |
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| 341 | status=failed |
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| 342 | else |
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| 343 | status=completed |
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| 344 | fi |
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[452] | 345 | |
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[222] | 346 | cat << END_MAIL > job_end.mail |
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| 347 | Dear ${LOGIN}, |
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| 348 | |
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[452] | 349 | Simulation ${config_UserChoices_JobName} is ${status} on supercomputer `hostname`. |
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[222] | 350 | Job started : ${DateBegin} |
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| 351 | Job ended : ${DateEnd} |
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[434] | 352 | Output files are available in ${R_SAVE} |
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[616] | 353 | Files to be rebuild are temporarily available in ${REBUILD_DIR} |
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| 354 | Pre-packed files are temporarily available in ${R_BUFR} |
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[452] | 355 | Script files, Script Outputs and Debug files (if necessary) are available in ${SUBMIT_DIR} |
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[222] | 356 | END_MAIL |
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| 357 | |
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| 358 | if [ ! -z ${config_UserChoices_MailName} ] ; then |
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[623] | 359 | mail -s "${config_UserChoices_JobName} ${status}" ${config_UserChoices_MailName} < job_end.mail |
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[222] | 360 | elif [ -f ~/.forward ] ; then |
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[623] | 361 | mail -s "${config_UserChoices_JobName} ${status}" $( cat ~/.forward ) < job_end.mail |
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[222] | 362 | fi |
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| 363 | sleep 10 |
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| 364 | rm -f job_end.mail |
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| 365 | |
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[544] | 366 | if [ $? -gt 0 ] ; then |
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| 367 | echo "IGCM_sys_SendMail : erreur." |
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| 368 | IGCM_debug_Exit "IGCM_sys_SendMail" |
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| 369 | fi |
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| 370 | IGCM_debug_PopStack "IGCM_sys_SendMail" |
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[222] | 371 | } |
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| 372 | |
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| 373 | #D-#================================================== |
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| 374 | #D-function IGCM_sys_Mkdir |
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| 375 | #D-* Purpose: Master locale mkdir command |
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| 376 | #D-* Examples: |
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| 377 | #D- |
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| 378 | function IGCM_sys_Mkdir { |
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[544] | 379 | IGCM_debug_PushStack "IGCM_sys_Mkdir" $@ |
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| 380 | if ( $DEBUG_sys ) ; then |
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| 381 | echo "IGCM_sys_Mkdir :" $@ |
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| 382 | fi |
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| 383 | if [ ! -d ${1} ]; then |
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| 384 | \mkdir -p $1 |
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| 385 | if [ $? -gt 0 ] ; then |
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| 386 | echo "IGCM_sys_Mkdir : erreur." |
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| 387 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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[222] | 388 | fi |
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[544] | 389 | fi |
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| 390 | # vérification : |
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| 391 | if [ ! -d ${1} ] ; then |
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| 392 | echo "IGCM_sys_Mkdir : erreur." |
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| 393 | IGCM_debug_Exit "IGCM_sys_Mkdir" |
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| 394 | fi |
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| 395 | IGCM_debug_PopStack "IGCM_sys_Mkdir" |
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[222] | 396 | } |
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| 397 | |
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| 398 | #D-#================================================== |
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| 399 | #D-function IGCM_sys_MkdirArchive |
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| 400 | #D-* Purpose: Mkdir on Archive |
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| 401 | #D-* Examples: |
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| 402 | #D- |
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| 403 | function IGCM_sys_MkdirArchive { |
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[544] | 404 | IGCM_debug_PushStack "IGCM_sys_MkdirArchive" $@ |
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| 405 | if ( $DEBUG_sys ) ; then |
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| 406 | echo "IGCM_sys_MkdirArchive :" $@ |
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| 407 | fi |
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| 408 | #- creation de repertoire sur le serveur fichier |
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[623] | 409 | if [ ! -d ${1} ]; then |
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[544] | 410 | \mkdir -p $1 |
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| 411 | if [ $? -gt 0 ] ; then |
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| 412 | echo "IGCM_sys_MkdirArchive : erreur." |
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| 413 | IGCM_debug_Exit "IGCM_sys_MkdirArchive" |
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[222] | 414 | fi |
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[544] | 415 | fi |
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| 416 | IGCM_debug_PopStack "IGCM_sys_MkdirArchive" |
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[222] | 417 | } |
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| 418 | |
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| 419 | #D-#================================================== |
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| 420 | #D-function IGCM_sys_MkdirWork |
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| 421 | #D-* Purpose: Mkdir on Work |
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| 422 | #D-* Examples: |
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| 423 | #D- |
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| 424 | function IGCM_sys_MkdirWork { |
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[544] | 425 | IGCM_debug_PushStack "IGCM_sys_MkdirWork" $@ |
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| 426 | if ( $DEBUG_sys ) ; then |
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| 427 | echo "IGCM_sys_MkdirWork :" $@ |
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| 428 | fi |
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| 429 | #- creation de repertoire sur le serveur fichier |
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[623] | 430 | if [ ! -d ${1} ]; then |
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[544] | 431 | \mkdir -p $1 |
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| 432 | if [ $? -gt 0 ] ; then |
---|
| 433 | echo "IGCM_sys_MkdirWork : erreur." |
---|
| 434 | IGCM_debug_Exit "IGCM_sys_MkdirWork" |
---|
[222] | 435 | fi |
---|
[544] | 436 | fi |
---|
| 437 | IGCM_debug_PopStack "IGCM_sys_MkdirWork" |
---|
[222] | 438 | } |
---|
| 439 | |
---|
| 440 | #D-#================================================== |
---|
| 441 | #D-function IGCM_sys_Cd |
---|
| 442 | #D-* Purpose: master cd command |
---|
| 443 | #D-* Examples: |
---|
| 444 | #D- |
---|
| 445 | function IGCM_sys_Cd { |
---|
[544] | 446 | IGCM_debug_PushStack "IGCM_sys_Cd" $@ |
---|
| 447 | if ( $DEBUG_sys ) ; then |
---|
| 448 | echo "IGCM_sys_Cd :" $@ |
---|
| 449 | fi |
---|
| 450 | \cd $1 |
---|
| 451 | if [ $? -gt 0 ] ; then |
---|
| 452 | echo "IGCM_sys_Cd : erreur." |
---|
| 453 | IGCM_debug_Exit "IGCM_sys_Cd" |
---|
| 454 | fi |
---|
| 455 | IGCM_debug_PopStack "IGCM_sys_Cd" |
---|
[222] | 456 | } |
---|
| 457 | |
---|
| 458 | #D-#================================================== |
---|
| 459 | #D-function IGCM_sys_Chmod |
---|
| 460 | #D-* Purpose: Chmod |
---|
| 461 | #D-* Examples: |
---|
| 462 | #D- |
---|
| 463 | function IGCM_sys_Chmod { |
---|
[544] | 464 | IGCM_debug_PushStack "IGCM_sys_Chmod" -- $@ |
---|
| 465 | if ( $DEBUG_sys ) ; then |
---|
| 466 | echo "IGCM_sys_Chmod :" $@ |
---|
| 467 | fi |
---|
| 468 | if [ $DRYRUN -le 1 ]; then |
---|
| 469 | \chmod $@ |
---|
| 470 | if [ $? -gt 0 ] ; then |
---|
| 471 | echo "IGCM_sys_Chmod : erreur." |
---|
| 472 | IGCM_debug_Exit "IGCM_sys_Chmod" |
---|
[222] | 473 | fi |
---|
[544] | 474 | else |
---|
| 475 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 476 | fi |
---|
| 477 | IGCM_debug_PopStack "IGCM_sys_Chmod" |
---|
[222] | 478 | } |
---|
| 479 | |
---|
| 480 | #D-#================================================== |
---|
| 481 | #D-function IGCM_sys_FileSize |
---|
| 482 | #D-* Purpose: Filesize |
---|
| 483 | #D-* Examples: |
---|
| 484 | #D- |
---|
| 485 | function IGCM_sys_FileSize { |
---|
[544] | 486 | IGCM_debug_PushStack "IGCM_sys_FileSize" $@ |
---|
[222] | 487 | |
---|
[544] | 488 | typeset sizeF |
---|
| 489 | set +A sizeF -- $( ls -la ${1} ) |
---|
| 490 | if [ $? -gt 0 ] ; then |
---|
| 491 | IGCM_debug_Exit "IGCM_sys_FileSize" |
---|
| 492 | fi |
---|
| 493 | eval ${2}=${sizeF[4]} |
---|
[222] | 494 | |
---|
[544] | 495 | IGCM_debug_PopStack "IGCM_sys_FileSize" |
---|
[222] | 496 | } |
---|
| 497 | |
---|
| 498 | #D-#================================================== |
---|
| 499 | #D-function IGCM_sys_TestDir |
---|
| 500 | #D-* Purpose: Test Directory that must exists |
---|
| 501 | #D-* Examples: |
---|
| 502 | #D- |
---|
| 503 | function IGCM_sys_TestDir { |
---|
[544] | 504 | IGCM_debug_PushStack "IGCM_sys_TestDir" $@ |
---|
| 505 | if ( $DEBUG_sys ) ; then |
---|
| 506 | echo "IGCM_sys_TestDir :" $@ |
---|
| 507 | fi |
---|
| 508 | typeset ExistFlag |
---|
| 509 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 510 | IGCM_debug_PopStack "IGCM_sys_TestDir" |
---|
[222] | 511 | |
---|
[544] | 512 | return ${ExistFlag} |
---|
[222] | 513 | } |
---|
| 514 | |
---|
| 515 | #D-#================================================== |
---|
| 516 | #D-function IGCM_sys_TestDirArchive |
---|
| 517 | #D-* Purpose: Test Directory that must exists on Archive |
---|
| 518 | #D-* Examples: |
---|
| 519 | #D- |
---|
| 520 | function IGCM_sys_TestDirArchive { |
---|
[544] | 521 | IGCM_debug_PushStack "IGCM_sys_TestDirArchive" $@ |
---|
| 522 | if ( $DEBUG_sys ) ; then |
---|
| 523 | echo "IGCM_sys_TestDirArchive :" $@ |
---|
| 524 | fi |
---|
| 525 | typeset ExistFlag |
---|
| 526 | ExistFlag=$( [ -d $1 ] && echo 0 || echo 1 ) |
---|
| 527 | IGCM_debug_PopStack "IGCM_sys_TestDirArchive" |
---|
[222] | 528 | |
---|
[544] | 529 | return ${ExistFlag} |
---|
[222] | 530 | } |
---|
| 531 | |
---|
| 532 | #D-#================================================== |
---|
[548] | 533 | #D-function IGCM_sys_IsFileArchived |
---|
| 534 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 535 | #D-* Examples: |
---|
| 536 | #D- |
---|
| 537 | function IGCM_sys_IsFileArchived { |
---|
| 538 | IGCM_debug_PushStack "IGCM_sys_IsFileArchived" $@ |
---|
| 539 | if ( $DEBUG_sys ) ; then |
---|
| 540 | echo "IGCM_sys_IsFileArchived :" $@ |
---|
| 541 | fi |
---|
| 542 | typeset IsArchivedFlag |
---|
[618] | 543 | IsArchivedFlag=$( [ X$( echo $1 | grep ^\/ccc\/store ) != X ] && echo 0 || echo 1 ) |
---|
[548] | 544 | IGCM_debug_PopStack "IGCM_sys_IsFileArchived" |
---|
| 545 | |
---|
| 546 | return ${IsArchivedFlag} |
---|
| 547 | } |
---|
| 548 | |
---|
| 549 | #D-#================================================== |
---|
[222] | 550 | #D-function IGCM_sys_TestFileArchive |
---|
| 551 | #D-* Purpose: Test file that must NOT EXISTS on Archive |
---|
| 552 | #D-* Examples: |
---|
| 553 | #D- |
---|
| 554 | function IGCM_sys_TestFileArchive { |
---|
[544] | 555 | IGCM_debug_PushStack "IGCM_sys_TestFileArchive" $@ |
---|
| 556 | if ( $DEBUG_sys ) ; then |
---|
| 557 | echo "IGCM_sys_TestFileArchive :" $@ |
---|
| 558 | fi |
---|
| 559 | typeset ExistFlag |
---|
| 560 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 561 | IGCM_debug_PopStack "IGCM_sys_TestFileArchive" |
---|
[222] | 562 | |
---|
[544] | 563 | return ${ExistFlag} |
---|
[222] | 564 | } |
---|
| 565 | |
---|
| 566 | #D-#================================================== |
---|
[544] | 567 | #D-function IGCM_sys_TestFileBuffer |
---|
| 568 | #D-* Purpose: Test file that must NOT EXISTS on Buffer |
---|
| 569 | #D-* Examples: |
---|
| 570 | #D- |
---|
| 571 | function IGCM_sys_TestFileBuffer { |
---|
| 572 | IGCM_debug_PushStack "IGCM_sys_TestFileBuffer" $@ |
---|
| 573 | typeset ExistFlag |
---|
| 574 | ExistFlag=$( [ -f $1 ] && echo 0 || echo 1 ) |
---|
| 575 | IGCM_debug_PopStack "IGCM_sys_TestFileBuffer" |
---|
| 576 | |
---|
| 577 | return ${ExistFlag} |
---|
| 578 | } |
---|
| 579 | |
---|
| 580 | #D-#================================================== |
---|
[222] | 581 | #D-function IGCM_sys_CountFileArchive |
---|
| 582 | #D-* Purpose: Count files on Archive filesystem |
---|
| 583 | #D-* Examples: |
---|
| 584 | #D- |
---|
| 585 | function IGCM_sys_CountFileArchive { |
---|
[544] | 586 | IGCM_debug_PushStack "IGCM_sys_CountFileArchive" $@ |
---|
| 587 | ls ${@} 2>/dev/null | wc -l |
---|
| 588 | if [ $? -gt 0 ] ; then |
---|
| 589 | echo "IGCM_sys_CountFileArchive : erreur." |
---|
| 590 | fi |
---|
| 591 | IGCM_debug_PopStack "IGCM_sys_CountFileArchive" |
---|
[222] | 592 | } |
---|
| 593 | |
---|
| 594 | #D-#================================================== |
---|
[544] | 595 | #D-function IGCM_sys_CountFileBuffer |
---|
| 596 | #D-* Purpose: Count files on Scratch filesystem |
---|
| 597 | #D-* Examples: |
---|
| 598 | #D- |
---|
| 599 | function IGCM_sys_CountFileBuffer { |
---|
| 600 | IGCM_debug_PushStack "IGCM_sys_CountFileBuffer" $@ |
---|
| 601 | ls ${@} 2>/dev/null | wc -l |
---|
| 602 | if [ $? -gt 0 ] ; then |
---|
| 603 | echo "IGCM_sys_CountFileBuffer : erreur." |
---|
| 604 | fi |
---|
| 605 | IGCM_debug_PopStack "IGCM_sys_CountFileBuffer" |
---|
| 606 | } |
---|
| 607 | |
---|
| 608 | #D-#================================================== |
---|
[222] | 609 | #D-function IGCM_sys_Tree |
---|
| 610 | #D-* Purpose: Tree directories with files on ${ARCHIVE} |
---|
| 611 | #D-* Examples: IGCM_sys_Tree ${R_IN} ${R_OUT} |
---|
| 612 | #D- |
---|
| 613 | function IGCM_sys_Tree { |
---|
[544] | 614 | IGCM_debug_PushStack "IGCM_sys_Tree" $@ |
---|
| 615 | if ( $DEBUG_sys ) ; then |
---|
| 616 | echo "IGCM_sys_Tree :" $@ |
---|
| 617 | fi |
---|
[222] | 618 | |
---|
[544] | 619 | \ls -lR ${@} |
---|
[222] | 620 | |
---|
[544] | 621 | IGCM_debug_PopStack "IGCM_sys_Tree" |
---|
[222] | 622 | } |
---|
| 623 | |
---|
| 624 | #D-#================================================== |
---|
| 625 | #D-function IGCM_sys_Tar |
---|
[544] | 626 | #D-* Purpose: master tar command |
---|
[222] | 627 | #D-* Examples: |
---|
| 628 | #D- |
---|
| 629 | function IGCM_sys_Tar { |
---|
[544] | 630 | IGCM_debug_PushStack "IGCM_sys_Tar" $@ |
---|
| 631 | if ( $DEBUG_sys ) ; then |
---|
| 632 | echo "IGCM_sys_Tar :" $@ |
---|
| 633 | fi |
---|
| 634 | \tar cf $@ |
---|
| 635 | if [ $? -gt 0 ] ; then |
---|
| 636 | echo "IGCM_sys_Tar : erreur." |
---|
| 637 | IGCM_debug_Exit "IGCM_sys_Tar" |
---|
| 638 | fi |
---|
| 639 | IGCM_debug_PopStack "IGCM_sys_Tar" |
---|
[222] | 640 | } |
---|
| 641 | |
---|
| 642 | #D-#================================================== |
---|
| 643 | #D-function IGCM_sys_UnTar |
---|
| 644 | #D-* Purpose: master un-tar command |
---|
| 645 | #D-* Examples: |
---|
| 646 | #D- |
---|
| 647 | function IGCM_sys_UnTar { |
---|
[544] | 648 | IGCM_debug_PushStack "IGCM_sys_UnTar" $@ |
---|
| 649 | if ( $DEBUG_sys ) ; then |
---|
| 650 | echo "IGCM_sys_UnTar :" $@ |
---|
| 651 | fi |
---|
| 652 | \tar xvf $1 |
---|
| 653 | if [ $? -gt 0 ] ; then |
---|
| 654 | echo "IGCM_sys_UnTar : erreur." |
---|
| 655 | IGCM_debug_Exit "IGCM_sys_UnTar" |
---|
| 656 | fi |
---|
| 657 | IGCM_debug_PopStack "IGCM_sys_UnTar" |
---|
[222] | 658 | } |
---|
| 659 | |
---|
| 660 | #D-#================================================== |
---|
| 661 | #D-function IGCM_sys_Qsub |
---|
| 662 | #D-* Purpose: Qsub new job |
---|
| 663 | #D-* Examples: |
---|
| 664 | #D- |
---|
| 665 | function IGCM_sys_Qsub { |
---|
[544] | 666 | IGCM_debug_PushStack "IGCM_sys_Qsub" $@ |
---|
| 667 | if ( $DEBUG_sys ) ; then |
---|
| 668 | echo "IGCM_sys_Qsub :" $@ |
---|
| 669 | fi |
---|
| 670 | typeset options |
---|
| 671 | if [ ${config_UserChoices_JobName}.${CumulPeriod} = "." ] ; then |
---|
| 672 | options=" -o ${Script_Output} -e ${Script_Output}" |
---|
| 673 | else |
---|
| 674 | options=" -o ${Script_Output} -e ${Script_Output} -r ${config_UserChoices_JobName}.${CumulPeriod}" |
---|
| 675 | fi |
---|
[467] | 676 | |
---|
[544] | 677 | /usr/local/bin/ccc_msub ${options} < $1 |
---|
| 678 | if [ $? -gt 0 ] ; then |
---|
| 679 | echo "IGCM_sys_Qsub : erreur ${options} $1" |
---|
| 680 | IGCM_debug_Exit "IGCM_sys_Qsub" |
---|
| 681 | fi |
---|
| 682 | IGCM_debug_PopStack "IGCM_sys_Qsub" |
---|
[222] | 683 | } |
---|
| 684 | |
---|
| 685 | #D-#================================================== |
---|
| 686 | #D-function IGCM_sys_QsubPost |
---|
| 687 | #D-* Purpose: Qsub new job on scalaire |
---|
| 688 | #D-* Examples: |
---|
| 689 | #D- |
---|
| 690 | function IGCM_sys_QsubPost { |
---|
[544] | 691 | IGCM_debug_PushStack "IGCM_sys_QsubPost" $@ |
---|
| 692 | if ( $DEBUG_sys ) ; then |
---|
| 693 | echo "IGCM_sys_QsubPost :" $@ |
---|
| 694 | fi |
---|
| 695 | |
---|
| 696 | # Need to export listVarEnv for cesium |
---|
| 697 | # NO Need to export listVarEnv for titane |
---|
| 698 | # ============ FRONTEND START ============ # |
---|
| 699 | |
---|
| 700 | /usr/local/bin/ccc_msub -p ${BRIDGE_MSUB_PROJECT} -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.out ${libIGCM_POST}/$1.job |
---|
| 701 | |
---|
| 702 | # ============ FRONTEND END ============ # |
---|
| 703 | |
---|
| 704 | # ============ CESIUM START ============ # |
---|
| 705 | # typeset NB_ESSAI DELAI status i |
---|
| 706 | # # number of tentative |
---|
| 707 | # NB_ESSAI=10 |
---|
| 708 | # # time delay between tentative |
---|
| 709 | # DELAI=10 |
---|
| 710 | # (( i = 0 )) |
---|
| 711 | # while [ $i -lt $NB_ESSAI ] ; do |
---|
| 712 | # /usr/local/bin/ccc_msub -o ${POST_DIR}/${Script_Post_Output}.out -e ${POST_DIR}/${Script_Post_Output}.e.out -E "-v ${listVarEnv}" ${libIGCM_POST}/$1.job |
---|
| 713 | # status=$? |
---|
| 714 | # if [ ${status} -gt 0 ]; then |
---|
| 715 | # sleep $DELAI |
---|
| 716 | # else |
---|
| 717 | # break |
---|
| 718 | # fi |
---|
| 719 | # (( i = i + 1 )) |
---|
[623] | 720 | # done |
---|
[544] | 721 | # ============ CESIUM END ============ # |
---|
| 722 | |
---|
| 723 | if [ $? -gt 0 ] ; then |
---|
| 724 | echo "IGCM_sys_QsubPost : erreur " $@ |
---|
| 725 | IGCM_debug_Exit "IGCM_sys_QsubPost" |
---|
| 726 | fi |
---|
| 727 | IGCM_debug_PopStack "IGCM_sys_QsubPost" |
---|
[222] | 728 | } |
---|
| 729 | |
---|
| 730 | #D-************************* |
---|
[623] | 731 | #D- File transfer functions |
---|
[222] | 732 | #D-************************* |
---|
| 733 | #D- |
---|
| 734 | |
---|
| 735 | #D-#================================================== |
---|
| 736 | #D-function IGCM_sys_Rsync_out |
---|
| 737 | #D-* Purpose: treat return val of rsync |
---|
| 738 | #D-* Examples: IGCM_sys_Rsync_out out_RET_rsync |
---|
| 739 | #D- Error values and explanations can depend on your system version. |
---|
| 740 | function IGCM_sys_Rsync_out { |
---|
[544] | 741 | RET=$1 |
---|
| 742 | if [ ! $RET ] ; then |
---|
| 743 | echo "rsync error !" |
---|
| 744 | fi |
---|
[222] | 745 | |
---|
[544] | 746 | if [ $MYLANG = "fr" ]; then |
---|
| 747 | case $RET in |
---|
| 748 | 0) return ;; |
---|
| 749 | 1) echo "Erreur de rsync ; RERR_SYNTAX : " |
---|
| 750 | echo "Erreur de syntaxe ou d'utilisation." |
---|
| 751 | return;; |
---|
| 752 | 2) echo "Erreur de rsync ; RERR_PROTOCOL : " |
---|
| 753 | echo "Incompatibilité de protocole." |
---|
| 754 | return;; |
---|
| 755 | 3) echo "Erreur de rsync ; RERR_FILESELECT 3" |
---|
| 756 | echo "Erreurs lors de la sélection des fichiers d'entrée sortie et" |
---|
| 757 | echo "répertoires" |
---|
| 758 | return;; |
---|
| 759 | 4) echo "Erreur de rsync ; RERR_UNSUPPORTED" |
---|
| 760 | echo "Action demandée non supportée : une tentative de manipulation de" |
---|
| 761 | echo "fichiers 64-bits sur une plate-forme qui ne les supporte pas a" |
---|
| 762 | echo "été faite ; ou une option qui est supportée par le client mais" |
---|
| 763 | echo "pas par le serveur a été spécifiée." |
---|
| 764 | return;; |
---|
| 765 | 10) echo "Erreur de rsync ; RERR_SOCKETIO" |
---|
| 766 | echo "Erreur dans le socket d'entrée sortie" |
---|
| 767 | return;; |
---|
| 768 | 11) echo "Erreur de rsync ; RERR_FILEIO" |
---|
| 769 | echo "Erreur d'entrée sortie fichier" |
---|
| 770 | return;; |
---|
| 771 | 12) echo "Erreur de rsync ; RERR_STREAMIO" |
---|
| 772 | echo "Erreur dans flux de donnée du protocole rsync" |
---|
| 773 | return;; |
---|
| 774 | 13) echo "Erreur de rsync ; RERR_MESSAGEIO" |
---|
| 775 | echo "Erreur avec les diagnostics du programme" |
---|
| 776 | return;; |
---|
| 777 | 14) echo "Erreur de rsync ; RERR_IPC" |
---|
| 778 | echo "Erreur dans le code IPC" |
---|
| 779 | return;; |
---|
| 780 | 20) echo "Erreur de rsync ; RERR_SIGNAL" |
---|
| 781 | echo "SIGUSR1 ou SIGINT reçu" |
---|
| 782 | return;; |
---|
| 783 | 21) echo "Erreur de rsync ; RERR_WAITCHILD" |
---|
| 784 | echo "Une erreur retournée par waitpid()" |
---|
| 785 | return;; |
---|
| 786 | 22) echo "Erreur de rsync ; RERR_MALLOC" |
---|
| 787 | echo "Erreur lors de l'allocation des tampons de mémoire de coeur" |
---|
| 788 | return;; |
---|
| 789 | 23) echo "" |
---|
| 790 | echo "Erreur fichier inexistant" |
---|
| 791 | return;; |
---|
| 792 | 30) echo "Erreur de rsync ; RERR_TIMEOUT" |
---|
| 793 | echo "Temps d'attente écoulé dans l'envoi/réception de données" |
---|
| 794 | return;; |
---|
| 795 | *) echo "Erreur de rsync : code de retour de rsync inconnu :" $RET |
---|
| 796 | return;; |
---|
| 797 | esac |
---|
| 798 | elif [ $MYLANG = "en" ] ; then |
---|
| 799 | case $RET in |
---|
[623] | 800 | 0) return;; |
---|
[544] | 801 | 1) echo "rsync error : Syntax or usage error " |
---|
| 802 | return;; |
---|
| 803 | 2) echo "rsync error : Protocol incompatibility " |
---|
| 804 | return;; |
---|
| 805 | 3) echo "rsync error : Errors selecting input/output files, dirs" |
---|
| 806 | return;; |
---|
| 807 | 4) echo "rsync error : Requested action not supported: an attempt" |
---|
| 808 | echo "was made to manipulate 64-bit files on a platform that cannot support" |
---|
| 809 | echo "them; or an option was specified that is supported by the client and" |
---|
| 810 | echo "not by the server." |
---|
| 811 | return;; |
---|
| 812 | 5) echo "rsync error : Error starting client-server protocol" |
---|
| 813 | return;; |
---|
| 814 | 10) echo "rsync error : Error in socket I/O " |
---|
| 815 | return;; |
---|
| 816 | 11) echo "rsync error : Error in file I/O " |
---|
| 817 | return;; |
---|
| 818 | 12) echo "rsync error : Error in rsync protocol data stream " |
---|
| 819 | return;; |
---|
| 820 | 13) echo "rsync error : Errors with program diagnostics " |
---|
| 821 | return;; |
---|
| 822 | 14) echo "rsync error : Error in IPC code " |
---|
| 823 | return;; |
---|
| 824 | 20) echo "rsync error : Received SIGUSR1 or SIGINT " |
---|
| 825 | return;; |
---|
| 826 | 21) echo "rsync error : Some error returned by waitpid() " |
---|
| 827 | return;; |
---|
| 828 | 22) echo "rsync error : Error allocating core memory buffers " |
---|
| 829 | return;; |
---|
| 830 | 23) echo "rsync error : Partial transfer due to error" |
---|
| 831 | return;; |
---|
| 832 | 24) echo "rsync error : Partial transfer due to vanished source files" |
---|
| 833 | return;; |
---|
| 834 | 30) echo "rsync error : Timeout in data send/receive " |
---|
| 835 | return;; |
---|
| 836 | *) echo "rsync error : return code of rsync unknown :" $RET |
---|
| 837 | return;; |
---|
| 838 | esac |
---|
| 839 | else |
---|
| 840 | echo "unknown language $MYLANG." |
---|
| 841 | return |
---|
| 842 | fi |
---|
[222] | 843 | } |
---|
| 844 | |
---|
| 845 | #D-#================================================== |
---|
| 846 | #D-function IGCM_sys_Miror_libIGCM |
---|
| 847 | #D-* Purpose: Mirror libIGCM PATH and lib to cesium |
---|
| 848 | #D-* Examples: |
---|
| 849 | #D- |
---|
| 850 | function IGCM_sys_Mirror_libIGCM { |
---|
[544] | 851 | IGCM_debug_PushStack "IGCM_sys_Mirror_libIGCM" |
---|
| 852 | if ( $DEBUG_sys ) ; then |
---|
| 853 | echo "IGCM_sys_Mirror_libIGCM" |
---|
| 854 | fi |
---|
[222] | 855 | |
---|
[544] | 856 | typeset RET DEST |
---|
[222] | 857 | |
---|
[544] | 858 | mkdir -p ${HOME}/MIRROR/${PATHlibIGCM} |
---|
[222] | 859 | |
---|
[544] | 860 | echo ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} > out_rsync 2>&1 |
---|
| 861 | ${RSYNC} ${RSYNC_opt} ${libIGCM} ${HOME}/MIRROR/${PATHlibIGCM} >> out_rsync 2>&1 |
---|
| 862 | RET=$? |
---|
[222] | 863 | |
---|
[544] | 864 | if [ ${RET} -gt 0 ] ; then |
---|
| 865 | echo "IGCM_sys_Mirror_libIGCM Warning : no libIGCM on cesium." |
---|
| 866 | cat out_rsync |
---|
| 867 | fi |
---|
| 868 | IGCM_debug_PopStack "IGCM_sys_Mirror_libIGCM" |
---|
[222] | 869 | } |
---|
| 870 | |
---|
| 871 | #==================================================== |
---|
| 872 | #- Call IGCM_sys_Mirror_libIGCM now ! |
---|
| 873 | if ( $MirrorlibIGCM ) ; then |
---|
[544] | 874 | IGCM_sys_Mirror_libIGCM |
---|
[222] | 875 | fi |
---|
| 876 | |
---|
| 877 | #D-#================================================== |
---|
| 878 | #D-function IGCM_sys_Cp |
---|
| 879 | #D-* Purpose: generic cp |
---|
| 880 | #D-* Examples: |
---|
| 881 | #D- |
---|
| 882 | function IGCM_sys_Cp { |
---|
[544] | 883 | IGCM_debug_PushStack "IGCM_sys_Cp" $@ |
---|
| 884 | if ( $DEBUG_sys ) ; then |
---|
| 885 | echo "IGCM_sys_Cp :" $@ |
---|
| 886 | fi |
---|
[222] | 887 | |
---|
[544] | 888 | typeset RET |
---|
[222] | 889 | |
---|
[544] | 890 | echo cp $@ > out_rsync 2>&1 |
---|
| 891 | \cp $@ >> out_rsync 2>&1 |
---|
| 892 | RET=$? |
---|
[222] | 893 | |
---|
[544] | 894 | if [ ${RET} -gt 0 ] ; then |
---|
| 895 | echo "IGCM_sys_Cp : error." |
---|
| 896 | cat out_rsync |
---|
| 897 | IGCM_debug_Exit "IGCM_sys_Cp" |
---|
| 898 | else |
---|
| 899 | \rm out_rsync |
---|
| 900 | fi |
---|
| 901 | IGCM_debug_PopStack "IGCM_sys_Cp" |
---|
[222] | 902 | } |
---|
| 903 | |
---|
| 904 | #D-#================================================== |
---|
| 905 | #D-function IGCM_sys_Rm |
---|
| 906 | #D-* Purpose: generic rm |
---|
| 907 | #D-* Examples: |
---|
| 908 | #D- |
---|
| 909 | function IGCM_sys_Rm { |
---|
[544] | 910 | IGCM_debug_PushStack "IGCM_sys_Rm" -- $@ |
---|
| 911 | if ( $DEBUG_sys ) ; then |
---|
| 912 | echo "IGCM_sys_Rm :" $@ |
---|
| 913 | fi |
---|
[222] | 914 | |
---|
[544] | 915 | typeset RET |
---|
[222] | 916 | |
---|
[544] | 917 | echo rm $@ > out_rsync 2>&1 |
---|
| 918 | \rm $@ >> out_rsync 2>&1 |
---|
| 919 | RET=$? |
---|
[222] | 920 | |
---|
[544] | 921 | if [ ${RET} -gt 0 ] ; then |
---|
| 922 | echo "IGCM_sys_Rm : error." |
---|
| 923 | cat out_rsync |
---|
| 924 | IGCM_debug_Exit "IGCM_sys_Rm" |
---|
| 925 | else |
---|
| 926 | \rm out_rsync |
---|
| 927 | fi |
---|
| 928 | IGCM_debug_PopStack "IGCM_sys_Rm" |
---|
[222] | 929 | } |
---|
| 930 | |
---|
| 931 | #D-#================================================== |
---|
[467] | 932 | #D-function IGCM_sys_RmRunDir |
---|
| 933 | #D-* Purpose: rm tmpdir (dummy function most of the time batch |
---|
| 934 | #D- scheduler will do the job) |
---|
| 935 | #D-* Examples: |
---|
| 936 | #D- |
---|
| 937 | function IGCM_sys_RmRunDir { |
---|
[544] | 938 | IGCM_debug_PushStack "IGCM_sys_RmRunDir" -- $@ |
---|
| 939 | if ( $DEBUG_sys ) ; then |
---|
| 940 | echo "IGCM_sys_RmRunDir :" $@ |
---|
| 941 | fi |
---|
[467] | 942 | |
---|
[544] | 943 | typeset RET |
---|
[467] | 944 | |
---|
[544] | 945 | echo rm $@ > out_rsync 2>&1 |
---|
| 946 | \rm $@ >> out_rsync 2>&1 |
---|
| 947 | RET=$? |
---|
[467] | 948 | |
---|
[544] | 949 | if [ ${RET} -gt 0 ] ; then |
---|
| 950 | echo "IGCM_sys_RmRunDir : error." |
---|
| 951 | cat out_rsync |
---|
| 952 | IGCM_debug_Exit "IGCM_sys_RmRunDir" |
---|
| 953 | else |
---|
| 954 | \rm out_rsync |
---|
| 955 | fi |
---|
| 956 | IGCM_debug_PopStack "IGCM_sys_RmRunDir" |
---|
[467] | 957 | } |
---|
| 958 | |
---|
| 959 | #D-#================================================== |
---|
[222] | 960 | #D-function IGCM_sys_Mv |
---|
| 961 | #D-* Purpose: generic move |
---|
| 962 | #D-* Examples: |
---|
| 963 | #D- |
---|
| 964 | function IGCM_sys_Mv { |
---|
[544] | 965 | IGCM_debug_PushStack "IGCM_sys_Mv" $@ |
---|
| 966 | if ( $DEBUG_sys ) ; then |
---|
| 967 | echo "IGCM_sys_Mv :" $@ |
---|
| 968 | fi |
---|
[222] | 969 | |
---|
[544] | 970 | if [ $DRYRUN = 0 ]; then |
---|
[222] | 971 | |
---|
[544] | 972 | typeset RET |
---|
[623] | 973 | |
---|
[544] | 974 | echo mv $@ > out_rsync 2>&1 |
---|
| 975 | \mv $@ >> out_rsync 2>&1 |
---|
| 976 | RET=$? |
---|
[623] | 977 | |
---|
[544] | 978 | if [ ${RET} -gt 0 ] ; then |
---|
| 979 | echo "IGCM_sys_Mv : error in mv." |
---|
| 980 | cat out_rsync |
---|
| 981 | IGCM_debug_Exit "IGCM_sys_Mv" |
---|
[222] | 982 | else |
---|
[544] | 983 | \rm out_rsync |
---|
[222] | 984 | fi |
---|
[544] | 985 | else |
---|
| 986 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 987 | fi |
---|
[222] | 988 | |
---|
[544] | 989 | IGCM_debug_PopStack "IGCM_sys_Mv" |
---|
[222] | 990 | } |
---|
| 991 | |
---|
| 992 | #D-#================================================== |
---|
| 993 | #D-function IGCM_sys_Put_Dir |
---|
| 994 | #D-* Purpose: Copy a complete directory on $(ARCHIVE) |
---|
| 995 | #D-* Examples: |
---|
| 996 | #D- |
---|
| 997 | function IGCM_sys_Put_Dir { |
---|
[544] | 998 | IGCM_debug_PushStack "IGCM_sys_Put_Dir" $@ |
---|
| 999 | if ( $DEBUG_sys ) ; then |
---|
| 1000 | echo "IGCM_sys_Put_Dir :" $@ |
---|
| 1001 | fi |
---|
| 1002 | if [ $DRYRUN = 0 ]; then |
---|
| 1003 | if [ ! -d ${1} ] ; then |
---|
| 1004 | echo "WARNING : IGCM_sys_Put_Dir ${1} DOES NOT EXIST ." |
---|
| 1005 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
| 1006 | return |
---|
[222] | 1007 | fi |
---|
| 1008 | |
---|
[544] | 1009 | typeset RET |
---|
[222] | 1010 | |
---|
[544] | 1011 | # Only if we use rsync |
---|
| 1012 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1013 | # |
---|
| 1014 | #USUAL WAY |
---|
| 1015 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 1016 | RET=$? |
---|
[222] | 1017 | |
---|
[544] | 1018 | if [ ${RET} -gt 0 ] ; then |
---|
| 1019 | echo "IGCM_sys_Put_Dir : error." |
---|
| 1020 | cat out_rsync |
---|
| 1021 | IGCM_debug_Exit "IGCM_sys_Put_Dir" |
---|
[222] | 1022 | else |
---|
[544] | 1023 | \rm out_rsync |
---|
[222] | 1024 | fi |
---|
[544] | 1025 | else |
---|
| 1026 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1027 | fi |
---|
| 1028 | IGCM_debug_PopStack "IGCM_sys_Put_Dir" |
---|
[222] | 1029 | } |
---|
| 1030 | |
---|
| 1031 | #D-#================================================== |
---|
| 1032 | #D-function IGCM_sys_Get_Dir |
---|
[544] | 1033 | #D-* Purpose: Copy a complete directory from ${ARCHIVE} |
---|
[222] | 1034 | #D-* Examples: |
---|
| 1035 | #D- |
---|
| 1036 | function IGCM_sys_Get_Dir { |
---|
[544] | 1037 | IGCM_debug_PushStack "IGCM_sys_Get_Dir" $@ |
---|
| 1038 | if ( $DEBUG_sys ) ; then |
---|
| 1039 | echo "IGCM_sys_Get_Dir :" $@ |
---|
| 1040 | fi |
---|
| 1041 | if [ $DRYRUN = 0 ]; then |
---|
| 1042 | # if [ ! -d ${1} ] ; then |
---|
| 1043 | # echo "WARNING : IGCM_sys_Get_Dir ${1} DOES NOT EXIST ." |
---|
| 1044 | # IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
| 1045 | # return |
---|
| 1046 | # fi |
---|
[222] | 1047 | |
---|
[544] | 1048 | typeset RET |
---|
[222] | 1049 | |
---|
[544] | 1050 | # Only if we use rsync |
---|
| 1051 | #IGCM_sys_TestDirArchive $( dirname $2 ) |
---|
| 1052 | # |
---|
| 1053 | # USUAL WAY |
---|
| 1054 | # add dmfind/dmget (to demigrate all offline files) : |
---|
[587] | 1055 | #dmfind $1 -state MIG -o -state OFL -o -state PAR | dmget |
---|
[544] | 1056 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 1057 | RET=$? |
---|
[222] | 1058 | |
---|
[544] | 1059 | if [ ${RET} -gt 0 ] ; then |
---|
| 1060 | echo "IGCM_sys_Get_Dir : error." |
---|
| 1061 | cat out_rsync |
---|
| 1062 | IGCM_debug_Exit "IGCM_sys_Get_Dir" |
---|
[222] | 1063 | else |
---|
[544] | 1064 | \rm out_rsync |
---|
[222] | 1065 | fi |
---|
[544] | 1066 | else |
---|
| 1067 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1068 | fi |
---|
| 1069 | IGCM_debug_PopStack "IGCM_sys_Get_Dir" |
---|
[222] | 1070 | } |
---|
| 1071 | |
---|
| 1072 | #D-#================================================== |
---|
| 1073 | #D-function IGCM_sys_Get_Master |
---|
| 1074 | #D-* Purpose: Copy a complete directory from MASTER filesystem |
---|
| 1075 | #D-* Examples: |
---|
| 1076 | #D- |
---|
| 1077 | function IGCM_sys_Get_Master { |
---|
[544] | 1078 | IGCM_debug_PushStack "IGCM_sys_Get_Master" $@ |
---|
| 1079 | if ( $DEBUG_sys ) ; then |
---|
| 1080 | echo "IGCM_sys_Get_Master :" $@ |
---|
| 1081 | fi |
---|
| 1082 | if [ $DRYRUN = 0 ]; then |
---|
[640] | 1083 | if ( [ ! -d ${1} ] && [ ! -f ${1} ] ) ; then |
---|
[544] | 1084 | echo "WARNING : IGCM_sys_Get_Master ${1} DOES NOT EXIST ." |
---|
| 1085 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
| 1086 | return |
---|
[222] | 1087 | fi |
---|
| 1088 | |
---|
[544] | 1089 | typeset RET |
---|
[222] | 1090 | |
---|
[544] | 1091 | #USUAL WAY |
---|
| 1092 | \cp -r $1 $2 > out_rsync 2>&1 |
---|
| 1093 | RET=$? |
---|
[222] | 1094 | |
---|
[544] | 1095 | if [ ${RET} -gt 0 ] ; then |
---|
| 1096 | echo "IGCM_sys_Get_Master : error." |
---|
| 1097 | cat out_rsync |
---|
| 1098 | IGCM_debug_Exit "IGCM_sys_Get_Master" |
---|
[222] | 1099 | else |
---|
[544] | 1100 | \rm out_rsync |
---|
[222] | 1101 | fi |
---|
[544] | 1102 | else |
---|
| 1103 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1104 | fi |
---|
| 1105 | IGCM_debug_PopStack "IGCM_sys_Get_Master" |
---|
[222] | 1106 | } |
---|
| 1107 | |
---|
| 1108 | #D-#================================================== |
---|
| 1109 | #D-function IGCM_sys_Put_Rest |
---|
[544] | 1110 | #D-* Purpose: Put computied restarts on ${ARCHIVE}. |
---|
[222] | 1111 | #D- File and target directory must exist. |
---|
| 1112 | #D-* Examples: |
---|
| 1113 | #D- |
---|
| 1114 | function IGCM_sys_Put_Rest { |
---|
[544] | 1115 | IGCM_debug_PushStack "IGCM_sys_Put_Rest" $@ |
---|
| 1116 | if ( $DEBUG_sys ) ; then |
---|
| 1117 | echo "IGCM_sys_Put_Rest :" $@ |
---|
| 1118 | fi |
---|
| 1119 | if [ $DRYRUN = 0 ]; then |
---|
| 1120 | if [ ! -f ${1} ] ; then |
---|
| 1121 | echo "ERROR : IGCM_sys_Put_Rest ${1} DOES NOT EXIST ." |
---|
| 1122 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1123 | fi |
---|
| 1124 | |
---|
[544] | 1125 | typeset RET |
---|
| 1126 | # |
---|
| 1127 | if [ X${JobType} = XRUN ] ; then |
---|
| 1128 | IGCM_sys_Chmod 444 ${1} |
---|
| 1129 | fi |
---|
[222] | 1130 | |
---|
[544] | 1131 | # |
---|
| 1132 | # USUAL WAY |
---|
| 1133 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1134 | RET=$? |
---|
| 1135 | |
---|
[623] | 1136 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1137 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1138 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1139 | |
---|
[623] | 1140 | # #RSYNC WITH NFS USE |
---|
| 1141 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1142 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[222] | 1143 | |
---|
[623] | 1144 | # RET=$? |
---|
| 1145 | # IGCM_sys_Rsync_out $RET |
---|
[222] | 1146 | |
---|
[623] | 1147 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1148 | # (( RET=RET+$? )) |
---|
[222] | 1149 | |
---|
[544] | 1150 | if [ ${RET} -gt 0 ] ; then |
---|
| 1151 | echo "IGCM_sys_Put_Rest : error." |
---|
| 1152 | cat out_rsync |
---|
| 1153 | IGCM_debug_Exit "IGCM_sys_Put_Rest" |
---|
[222] | 1154 | else |
---|
[544] | 1155 | \rm out_rsync |
---|
[222] | 1156 | fi |
---|
[544] | 1157 | else |
---|
| 1158 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1159 | fi |
---|
| 1160 | IGCM_debug_PopStack "IGCM_sys_Put_Rest" |
---|
[222] | 1161 | } |
---|
| 1162 | |
---|
| 1163 | #D-#================================================== |
---|
[544] | 1164 | #D-function IGCM_sys_PutBuffer_Rest |
---|
| 1165 | #D-* Purpose: Put computied restarts on ${SCRATCHDIR}. |
---|
| 1166 | #D- File and target directory must exist. |
---|
| 1167 | #D-* Examples: |
---|
| 1168 | #D- |
---|
| 1169 | function IGCM_sys_PutBuffer_Rest { |
---|
| 1170 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Rest" $@ |
---|
| 1171 | if ( $DEBUG_sys ) ; then |
---|
| 1172 | echo "IGCM_sys_PutBuffer_Rest :" $@ |
---|
| 1173 | fi |
---|
| 1174 | if [ $DRYRUN = 0 ]; then |
---|
| 1175 | if [ ! -f ${1} ] ; then |
---|
| 1176 | echo "ERROR : IGCM_sys_PutBuffer_Rest ${1} DOES NOT EXIST ." |
---|
| 1177 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1178 | fi |
---|
| 1179 | |
---|
| 1180 | typeset RET |
---|
| 1181 | # |
---|
| 1182 | if [ X${JobType} = XRUN ] ; then |
---|
| 1183 | IGCM_sys_Chmod 444 ${1} |
---|
| 1184 | fi |
---|
| 1185 | |
---|
| 1186 | # |
---|
| 1187 | # USUAL WAY |
---|
| 1188 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1189 | RET=$? |
---|
| 1190 | |
---|
| 1191 | if [ ${RET} -gt 0 ] ; then |
---|
| 1192 | echo "IGCM_sys_PutBuffer_Rest : error." |
---|
| 1193 | cat out_rsync |
---|
| 1194 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Rest" |
---|
| 1195 | else |
---|
| 1196 | \rm out_rsync |
---|
| 1197 | fi |
---|
| 1198 | else |
---|
| 1199 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1200 | fi |
---|
| 1201 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Rest" |
---|
| 1202 | } |
---|
| 1203 | |
---|
| 1204 | #D-#================================================== |
---|
[222] | 1205 | #D-function IGCM_sys_Put_Out |
---|
[544] | 1206 | #D-* Purpose: Copy a file on ${ARCHIVE} after having chmod it in readonly |
---|
[222] | 1207 | #D-* Examples: |
---|
| 1208 | #D- |
---|
| 1209 | function IGCM_sys_Put_Out { |
---|
[544] | 1210 | IGCM_debug_PushStack "IGCM_sys_Put_Out" $@ |
---|
| 1211 | if ( $DEBUG_sys ) ; then |
---|
| 1212 | echo "IGCM_sys_Put_Out :" $@ |
---|
| 1213 | fi |
---|
| 1214 | if [ $DRYRUN = 0 ]; then |
---|
| 1215 | if [ ! -f ${1} ] ; then |
---|
| 1216 | echo "WARNING : IGCM_sys_Put_Out ${1} DOES NOT EXIST ." |
---|
| 1217 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1218 | return 1 |
---|
[222] | 1219 | fi |
---|
[544] | 1220 | # |
---|
| 1221 | IGCM_sys_MkdirArchive $( dirname $2 ) |
---|
| 1222 | # |
---|
| 1223 | typeset RET |
---|
[222] | 1224 | |
---|
[544] | 1225 | #===================================================== |
---|
| 1226 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1227 | #===================================================== |
---|
[222] | 1228 | |
---|
[544] | 1229 | #echo ${2} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1230 | #if [ $? -eq 0 ] ; then |
---|
| 1231 | # typeset WORKPATH FILEPATH |
---|
| 1232 | # WORKPATH=$( dirname $2 | sed -e "s|${R_OUT}|${R_BUF}|" ) |
---|
[623] | 1233 | # IGCM_sys_MkdirWork ${WORKPATH} |
---|
[544] | 1234 | # FILEPATH=${WORKPATH}/$( basename $2 ) |
---|
| 1235 | # # |
---|
| 1236 | # IGCM_sys_Cp ${1} ${FILEPATH} |
---|
| 1237 | #fi |
---|
[222] | 1238 | |
---|
[544] | 1239 | if [ X${JobType} = XRUN ] ; then |
---|
| 1240 | if [ X${3} = X ] ; then |
---|
[623] | 1241 | IGCM_sys_Chmod 444 ${1} |
---|
[544] | 1242 | fi |
---|
| 1243 | fi |
---|
| 1244 | # |
---|
| 1245 | # USUAL WAY |
---|
| 1246 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1247 | RET=$? |
---|
[222] | 1248 | |
---|
[623] | 1249 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1250 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} > out_rsync 2>&1 |
---|
| 1251 | # ${RSYNC} ${RSYNC_opt} -e ssh ${RUN_DIR}/$1 ${STOREHOST}:${2} >> out_rsync 2>&1 |
---|
[222] | 1252 | |
---|
[623] | 1253 | # #RSYNC WITH NFS USE |
---|
| 1254 | # echo ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} > out_rsync 2>&1 |
---|
| 1255 | # ${RSYNC} ${RSYNC_opt} ${RUN_DIR}/$1 ${2} >> out_rsync 2>&1 |
---|
[222] | 1256 | |
---|
[623] | 1257 | # RET=$? |
---|
| 1258 | # IGCM_sys_Rsync_out $RET |
---|
[222] | 1259 | |
---|
[623] | 1260 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1261 | # (( RET=RET+$? )) |
---|
[222] | 1262 | |
---|
[544] | 1263 | if [ ${RET} -gt 0 ] ; then |
---|
| 1264 | echo "IGCM_sys_Put_Out : error." |
---|
| 1265 | cat out_rsync |
---|
| 1266 | IGCM_debug_Exit "IGCM_sys_Put_Out" |
---|
[222] | 1267 | else |
---|
[544] | 1268 | \rm out_rsync |
---|
[222] | 1269 | fi |
---|
[544] | 1270 | else |
---|
| 1271 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1272 | fi |
---|
| 1273 | IGCM_debug_PopStack "IGCM_sys_Put_Out" |
---|
| 1274 | return 0 |
---|
[222] | 1275 | } |
---|
| 1276 | |
---|
| 1277 | #D-#================================================== |
---|
[544] | 1278 | #D-function IGCM_sys_PutBuffer_Out |
---|
| 1279 | #D-* Purpose: Copy a file on ${SCRATCHDIR} after having chmod it in readonly |
---|
| 1280 | #D-* Examples: |
---|
| 1281 | #D- |
---|
| 1282 | function IGCM_sys_PutBuffer_Out { |
---|
| 1283 | IGCM_debug_PushStack "IGCM_sys_PutBuffer_Out" $@ |
---|
| 1284 | if ( $DEBUG_sys ) ; then |
---|
| 1285 | echo "IGCM_sys_PutBuffer_Out :" $@ |
---|
| 1286 | fi |
---|
| 1287 | if [ $DRYRUN = 0 ]; then |
---|
| 1288 | if [ ! -f ${1} ] ; then |
---|
| 1289 | echo "WARNING : IGCM_sys_PutBuffer_Out ${1} DOES NOT EXIST ." |
---|
| 1290 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1291 | return 1 |
---|
| 1292 | fi |
---|
| 1293 | # |
---|
| 1294 | IGCM_sys_Mkdir $( dirname $2 ) |
---|
| 1295 | # |
---|
| 1296 | typeset RET |
---|
| 1297 | |
---|
| 1298 | if [ X${JobType} = XRUN ] ; then |
---|
| 1299 | if [ X${3} = X ] ; then |
---|
[623] | 1300 | IGCM_sys_Chmod 444 ${1} |
---|
[544] | 1301 | fi |
---|
| 1302 | fi |
---|
| 1303 | # |
---|
| 1304 | # USUAL WAY |
---|
| 1305 | \cp $1 $2 > out_rsync 2>&1 |
---|
| 1306 | RET=$? |
---|
| 1307 | |
---|
| 1308 | if [ ${RET} -gt 0 ] ; then |
---|
| 1309 | echo "IGCM_sys_PutBuffer_Out : error." |
---|
| 1310 | cat out_rsync |
---|
| 1311 | IGCM_debug_Exit "IGCM_sys_PutBuffer_Out" |
---|
| 1312 | else |
---|
| 1313 | \rm out_rsync |
---|
| 1314 | fi |
---|
| 1315 | else |
---|
| 1316 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1317 | fi |
---|
| 1318 | IGCM_debug_PopStack "IGCM_sys_PutBuffer_Out" |
---|
| 1319 | return 0 |
---|
| 1320 | } |
---|
| 1321 | |
---|
| 1322 | #D-#================================================== |
---|
[222] | 1323 | #D-function IGCM_sys_Get |
---|
| 1324 | #D-* Purpose: Get a file from ${ARCHIVE} |
---|
| 1325 | #D-* Examples: IGCM_sys_Get myfile /destpath/myfile_with_PREFIX |
---|
| 1326 | #D- IGCM_sys_Get /l Array_contain_myfiles /destpath/ |
---|
| 1327 | function IGCM_sys_Get { |
---|
[544] | 1328 | IGCM_debug_PushStack "IGCM_sys_Get" $@ |
---|
[222] | 1329 | |
---|
[623] | 1330 | typeset DEST RET dm_liste ifile target file_work |
---|
[222] | 1331 | |
---|
[544] | 1332 | if ( $DEBUG_sys ) ; then |
---|
| 1333 | echo "IGCM_sys_Get :" $@ |
---|
| 1334 | fi |
---|
| 1335 | if [ $DRYRUN -le 2 ]; then |
---|
| 1336 | if [ X${1} = X'/l' ] ; then |
---|
| 1337 | # test if the first file is present in the old computation : |
---|
| 1338 | eval set +A dm_liste \${${2}} |
---|
| 1339 | else |
---|
| 1340 | eval set +A dm_liste ${1} |
---|
[222] | 1341 | fi |
---|
[544] | 1342 | eval DEST=\${${#}} |
---|
[222] | 1343 | |
---|
[544] | 1344 | #===================================================== |
---|
| 1345 | # COMMENT OUT DOUBLE COPY ON SCRATCHDIR |
---|
| 1346 | #===================================================== |
---|
[222] | 1347 | |
---|
[544] | 1348 | # Is it an R_OUT file (not R_IN) ? |
---|
| 1349 | #echo ${dm_liste[0]} | grep "${R_OUT}" > /dev/null 2>&1 |
---|
| 1350 | #if [ $? -eq 0 ] ; then |
---|
| 1351 | # # Yes ? then we try to get it in SCRATCHDIR |
---|
| 1352 | # set +A file_work $( echo ${dm_liste[*]} | sed -e "s|${R_OUT}|${R_BUF}|g" ) |
---|
| 1353 | # if [ -f ${file_work[0]} ] ; then |
---|
| 1354 | # IGCM_sys_Cp ${file_work[*]} ${DEST} |
---|
| 1355 | # IGCM_debug_PopStack "IGCM_sys_Get" |
---|
| 1356 | # return |
---|
| 1357 | # fi |
---|
| 1358 | #fi |
---|
[222] | 1359 | |
---|
[544] | 1360 | # test if the (first) file is present in the old computation : |
---|
| 1361 | IGCM_sys_TestFileArchive ${dm_liste[0]} |
---|
| 1362 | RET=$? |
---|
| 1363 | if [ ${RET} -gt 0 ] ; then |
---|
| 1364 | echo "IGCM_sys_Get, ERROR : regular file ${dm_liste[0]} DOES NOT EXIST ." |
---|
| 1365 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1366 | fi |
---|
[222] | 1367 | |
---|
[587] | 1368 | #dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1369 | ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[544] | 1370 | RET=$? |
---|
| 1371 | if [ ${RET} -gt 0 ] ; then |
---|
| 1372 | echo "WARNING IGCM_sys_Get : demigration error." |
---|
| 1373 | cat out_rsync |
---|
| 1374 | echo "WARNING IGCM_sys_Get : will stop later if the cp fails." |
---|
| 1375 | fi |
---|
[222] | 1376 | |
---|
[544] | 1377 | #if [ ${RET} -gt 0 ] ; then |
---|
| 1378 | # if [ ! "X$( grep "Lost dmusrcmd connection" out_rsync )" = "X" ] ; then |
---|
| 1379 | # cat out_rsync |
---|
| 1380 | # echo "WARNING IGCM_sys_Get : Lost dmusrcmd connection : " |
---|
| 1381 | # sleep 30 |
---|
| 1382 | # echo "We try another time" |
---|
[587] | 1383 | ## dmget ${dm_liste[*]} > out_rsync 2>&1 |
---|
| 1384 | # ccc_hsm get ${dm_liste[*]} > out_rsync 2>&1 |
---|
[544] | 1385 | # RET=$? |
---|
| 1386 | # if [ ${RET} -gt 0 ] ; then |
---|
[623] | 1387 | # echo "ERROR IGCM_sys_Get : again demigration error :" |
---|
| 1388 | # cat out_rsync |
---|
| 1389 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
[544] | 1390 | # fi |
---|
| 1391 | # else |
---|
| 1392 | # echo "ERROR IGCM_sys_Get : demigration error :" |
---|
| 1393 | # cat out_rsync |
---|
| 1394 | # IGCM_debug_Exit "IGCM_sys_Get" |
---|
| 1395 | # fi |
---|
| 1396 | #fi |
---|
[520] | 1397 | |
---|
[544] | 1398 | #USUAL WAY |
---|
| 1399 | if [ X${1} = X'/l' ] ; then |
---|
| 1400 | (( RET=0 )) |
---|
| 1401 | for target in ${dm_liste[*]} ; do |
---|
[623] | 1402 | local_file=$( basename ${target} ) |
---|
| 1403 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1404 | (( RET = RET + $? )) |
---|
[544] | 1405 | done |
---|
| 1406 | else |
---|
| 1407 | \cp ${dm_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1408 | RET=$? |
---|
| 1409 | fi |
---|
[520] | 1410 | |
---|
[623] | 1411 | # #RSYNC WITH NETWORK SSH CALL |
---|
| 1412 | # echo ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1413 | # ${RSYNC} ${RSYNC_opt} -e ssh ${STOREHOST}:"${dm_liste}" ${STOREHOST}:${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[222] | 1414 | |
---|
[623] | 1415 | # #RSYNC WITH NFS USE |
---|
| 1416 | # echo ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} > out_rsync 2>&1 |
---|
| 1417 | # ${RSYNC} ${RSYNC_opt} ${dm_liste} ${RUN_DIR}/${DEST} >> out_rsync 2>&1 |
---|
[222] | 1418 | |
---|
[623] | 1419 | # RET=$? |
---|
| 1420 | # IGCM_sys_Rsync_out $RET |
---|
[222] | 1421 | |
---|
[623] | 1422 | # ${libIGCM}/libIGCM_sys/IGCM_analyse_rsync_out.awk out_rsync |
---|
| 1423 | # (( RET=RET+$? )) |
---|
[222] | 1424 | |
---|
[544] | 1425 | if [ ${RET} -gt 0 ] ; then |
---|
| 1426 | echo "IGCM_sys_Get : copy error." |
---|
| 1427 | cat out_rsync |
---|
| 1428 | IGCM_debug_Exit "IGCM_sys_Get" |
---|
[222] | 1429 | else |
---|
[544] | 1430 | \rm out_rsync |
---|
[222] | 1431 | fi |
---|
[544] | 1432 | else |
---|
| 1433 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1434 | fi |
---|
| 1435 | IGCM_debug_PopStack "IGCM_sys_Get" |
---|
[222] | 1436 | } |
---|
| 1437 | |
---|
| 1438 | #D-#================================================== |
---|
[544] | 1439 | #D-function IGCM_sys_GetBuffer |
---|
| 1440 | #D-* Purpose: Get a file from ${SCRATCHDIR} |
---|
| 1441 | #D-* Examples: IGCM_sys_GetBuffer myfile /destpath/myfile_with_PREFIX |
---|
| 1442 | #D- IGCM_sys_GetBuffer /l Array_contain_myfiles /destpath/ |
---|
| 1443 | function IGCM_sys_GetBuffer { |
---|
| 1444 | IGCM_debug_PushStack "IGCM_sys_GetBuffer" $@ |
---|
| 1445 | |
---|
[623] | 1446 | typeset DEST RET buf_liste ifile target file_work |
---|
[544] | 1447 | |
---|
| 1448 | if ( $DEBUG_sys ) ; then |
---|
| 1449 | echo "IGCM_sys_GetBuffer :" $@ |
---|
| 1450 | fi |
---|
| 1451 | if [ $DRYRUN -le 2 ]; then |
---|
| 1452 | if [ X${1} = X'/l' ] ; then |
---|
| 1453 | # test if the first file is present in the old computation : |
---|
| 1454 | eval set +A buf_liste \${${2}} |
---|
| 1455 | else |
---|
| 1456 | eval set +A buf_liste ${1} |
---|
| 1457 | fi |
---|
| 1458 | eval DEST=\${${#}} |
---|
| 1459 | |
---|
| 1460 | #USUAL WAY |
---|
| 1461 | if [ X${1} = X'/l' ] ; then |
---|
| 1462 | (( RET=0 )) |
---|
| 1463 | for target in ${buf_liste[*]} ; do |
---|
[623] | 1464 | local_file=$( basename ${target} ) |
---|
| 1465 | \cp ${target} ${DEST}/${local_file} >> out_rsync 2>&1 |
---|
| 1466 | (( RET = RET + $? )) |
---|
[544] | 1467 | done |
---|
| 1468 | else |
---|
| 1469 | \cp ${buf_liste} ${DEST} >> out_rsync 2>&1 |
---|
| 1470 | RET=$? |
---|
| 1471 | fi |
---|
| 1472 | |
---|
| 1473 | if [ ${RET} -gt 0 ] ; then |
---|
| 1474 | echo "IGCM_sys_GetBuffer : copy error." |
---|
| 1475 | cat out_rsync |
---|
| 1476 | IGCM_debug_Exit "IGCM_sys_GetBuffer" |
---|
| 1477 | else |
---|
| 1478 | \rm out_rsync |
---|
| 1479 | fi |
---|
| 1480 | else |
---|
| 1481 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1482 | fi |
---|
| 1483 | IGCM_debug_PopStack "IGCM_sys_GetBuffer" |
---|
| 1484 | } |
---|
| 1485 | |
---|
| 1486 | #D-#================================================== |
---|
[222] | 1487 | #D-function IGCM_sys_GetDate_FichWork |
---|
| 1488 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem WORK |
---|
| 1489 | #D-* Examples: |
---|
| 1490 | #D- |
---|
| 1491 | function IGCM_sys_GetDate_FichWork { |
---|
[544] | 1492 | IGCM_debug_PushStack "IGCM_sys_FichWork" $@ |
---|
| 1493 | if ( $DEBUG_sys ) ; then |
---|
| 1494 | echo "IGCM_sys_GetDate_FichWork :" $@ |
---|
| 1495 | fi |
---|
| 1496 | typeset dateF |
---|
| 1497 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1498 | eval ${2}=${dateF[5]} |
---|
[538] | 1499 | |
---|
[222] | 1500 | # donne la date filesys d'un fichier sur la machine work |
---|
[544] | 1501 | IGCM_debug_PopStack "IGCM_sys_FichWork" |
---|
[222] | 1502 | } |
---|
| 1503 | |
---|
| 1504 | #D-#================================================== |
---|
| 1505 | #D-function IGCM_sys_GetDate_FichArchive |
---|
[623] | 1506 | #D-* Purpose: donne la date filesys d'un fichier sur le filesystem ARCHIVE |
---|
[222] | 1507 | #D-* Examples: |
---|
| 1508 | #D- |
---|
| 1509 | function IGCM_sys_GetDate_FichArchive { |
---|
[544] | 1510 | IGCM_debug_PushStack "IGCM_sys_FichArchive" $@ |
---|
| 1511 | if ( $DEBUG_sys ) ; then |
---|
| 1512 | echo "IGCM_sys_GetDate_FichArchive :" $@ |
---|
| 1513 | fi |
---|
| 1514 | typeset dateF |
---|
| 1515 | set +A dateF -- $( ls -l --full-time --time-style='+%Y%m%d%H%M%S' ${1} ) |
---|
| 1516 | eval ${2}=${dateF[5]} |
---|
| 1517 | |
---|
| 1518 | IGCM_debug_PopStack "IGCM_sys_FichArchive" |
---|
| 1519 | } |
---|
| 1520 | |
---|
| 1521 | #D-#================================================== |
---|
| 1522 | #D-function IGCM_sys_Dods_Rm |
---|
| 1523 | #D-* Purpose: DO NOTHING ! Put ${ARCHIVE} files on DODS internet protocole. |
---|
| 1524 | #D-* Examples: |
---|
| 1525 | #D- |
---|
| 1526 | function IGCM_sys_Dods_Rm { |
---|
| 1527 | if ( $DEBUG_sys ) ; then |
---|
| 1528 | echo "IGCM_sys_Dods_Rm :" $@ |
---|
| 1529 | fi |
---|
| 1530 | typeset RET |
---|
| 1531 | RET=0 |
---|
| 1532 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1533 | |
---|
| 1534 | # if [ ! -d /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} ] ; then |
---|
| 1535 | # echo "WARNING : IGCM_sys_Dods_Rm /dmnfs/cont003/dods/public/${LOGIN}/${R_DODS}/${1} DOES NOT EXIST ." |
---|
| 1536 | # echo "Nothing has been done." |
---|
| 1537 | # return |
---|
| 1538 | # fi |
---|
| 1539 | |
---|
| 1540 | /ccc/cont003/home/dsm/p86maf/bin/dods_rm public/${LOGIN}/${R_DODS}/${1} # > out_dods_rm 2>&1 |
---|
[544] | 1541 | RET=$? |
---|
[623] | 1542 | |
---|
[544] | 1543 | # if [ ${RET} -gt 0 ] ; then |
---|
[623] | 1544 | # echo "IGCM_sys_Dods_Rm : error." |
---|
| 1545 | # cat out_dods_rm |
---|
| 1546 | # IGCM_debug_Exit "IGCM_sys_Dods_Rm" |
---|
[544] | 1547 | # else |
---|
[623] | 1548 | # rm out_dods_rm |
---|
[544] | 1549 | # fi |
---|
[538] | 1550 | |
---|
[544] | 1551 | else |
---|
| 1552 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1553 | fi |
---|
| 1554 | return $RET |
---|
[222] | 1555 | } |
---|
| 1556 | |
---|
[544] | 1557 | #D-#================================================== |
---|
| 1558 | #D-function IGCM_sys_Dods_Cp |
---|
| 1559 | #D-* Purpose: Copy $(ARCHIVE) files on DODS internet protocole. |
---|
| 1560 | #D-* Examples: |
---|
| 1561 | #D- |
---|
| 1562 | function IGCM_sys_Dods_Cp { |
---|
| 1563 | if ( $DEBUG_sys ) ; then |
---|
| 1564 | echo "IGCM_sys_Dods_Cp :" $@ |
---|
| 1565 | fi |
---|
| 1566 | typeset RET |
---|
| 1567 | RET=0 |
---|
| 1568 | if [ $DRYRUN = 0 ]; then |
---|
[591] | 1569 | |
---|
| 1570 | # if [ ! -d ${R_SAVE}/${1} ] ; then |
---|
| 1571 | # echo "WARNING : IGCM_sys_Dods_Cp ${R_SAVE}/${1} DOES NOT EXIST ." |
---|
| 1572 | # echo "Nothing has been done." |
---|
| 1573 | # return |
---|
| 1574 | # fi |
---|
| 1575 | |
---|
| 1576 | /ccc/cont003/home/dsm/p86maf/bin/dods_cp ${1} public/${LOGIN}/${R_DODS} # > out_dods_cp 2>&1 |
---|
[544] | 1577 | RET=$? |
---|
| 1578 | |
---|
[623] | 1579 | # if [ ${RET} -gt 0 ] ; then |
---|
| 1580 | # echo "IGCM_sys_Dods_Cp : error." |
---|
| 1581 | # cat out_dods_cp |
---|
| 1582 | # IGCM_debug_Exit "IGCM_sys_Dods_Cp" |
---|
| 1583 | # else |
---|
| 1584 | # rm out_dods_cp |
---|
| 1585 | # fi |
---|
[544] | 1586 | |
---|
| 1587 | else |
---|
| 1588 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1589 | fi |
---|
| 1590 | return $RET |
---|
| 1591 | } |
---|
| 1592 | |
---|
| 1593 | #D-#================================================== |
---|
| 1594 | #D-function IGCM_sys_Put_Dods |
---|
| 1595 | #D-* Purpose: Put $(ARCHIVE) files on DODS internet protocole. |
---|
| 1596 | #D-* Examples: |
---|
| 1597 | #D- |
---|
| 1598 | function IGCM_sys_Put_Dods { |
---|
| 1599 | IGCM_debug_PushStack "IGCM_sys_Put_Dods" $@ |
---|
| 1600 | if ( $DEBUG_sys ) ; then |
---|
| 1601 | echo "IGCM_sys_Put_Dods :" $@ |
---|
| 1602 | fi |
---|
[591] | 1603 | set -vx |
---|
[587] | 1604 | typeset RET |
---|
[544] | 1605 | if [ $DRYRUN = 0 ]; then |
---|
[587] | 1606 | if ( [ ! -d ${R_SAVE}/${1} ] && [ ! -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1607 | echo "WARNING IGCM_sys_Put_Dods : None of the following directories exist. Exactly one should." |
---|
| 1608 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} DOES NOT EXIST." |
---|
| 1609 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} DOES NOT EXIST." |
---|
[544] | 1610 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1611 | return |
---|
| 1612 | fi |
---|
| 1613 | |
---|
[587] | 1614 | if ( [ -d ${R_SAVE}/${1} ] && [ -d ${R_FIGR}/${1} ] ) ; then |
---|
| 1615 | echo "WARNING IGCM_sys_Put_Dods : Both of the following directories exist. Exactly one should." |
---|
| 1616 | echo "WARNING IGCM_sys_Put_Dods : ${R_SAVE}/${1} EXISTS." |
---|
| 1617 | echo "WARNING IGCM_sys_Put_Dods : ${R_FIGR}/${1} EXISTS." |
---|
| 1618 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1619 | return |
---|
| 1620 | fi |
---|
| 1621 | # |
---|
| 1622 | if [ -d ${R_SAVE}/${1} ] ; then |
---|
| 1623 | cd ${R_SAVE} |
---|
| 1624 | elif [ -d ${R_FIGR}/${1} ] ; then |
---|
| 1625 | cd ${R_FIGR} |
---|
| 1626 | fi |
---|
| 1627 | |
---|
[544] | 1628 | IGCM_sys_Dods_Rm ${1} |
---|
| 1629 | IGCM_sys_Dods_Cp ${1} |
---|
| 1630 | RET=0 |
---|
[623] | 1631 | |
---|
[544] | 1632 | if [ ${RET} -gt 0 ] ; then |
---|
| 1633 | echo "IGCM_sys_Put_Dods : error." |
---|
| 1634 | IGCM_debug_Exit "IGCM_sys_Put_Dods" |
---|
| 1635 | fi |
---|
| 1636 | else |
---|
| 1637 | ( ${DEBUG_debug} ) && echo "DRYRUN mode = " $DRYRUN >> stack |
---|
| 1638 | fi |
---|
| 1639 | IGCM_debug_PopStack "IGCM_sys_Put_Dods" |
---|
| 1640 | } |
---|
| 1641 | |
---|
[222] | 1642 | ############################################################## |
---|
| 1643 | # REBUILD OPERATOR |
---|
| 1644 | |
---|
| 1645 | function IGCM_sys_rebuild { |
---|
[544] | 1646 | IGCM_debug_PushStack "IGCM_sys_rebuild" -- $@ |
---|
| 1647 | if ( $DEBUG_sys ) ; then |
---|
| 1648 | echo "IGCM_sys_rebuild :" $@ |
---|
| 1649 | fi |
---|
| 1650 | /home/cont003/p86ipsl/X64/bin/rebuild -f -o $@ |
---|
| 1651 | if [ $? -gt 0 ] ; then |
---|
| 1652 | echo "IGCM_sys_rebuild : erreur ${@}." |
---|
| 1653 | IGCM_debug_Exit "rebuild" |
---|
| 1654 | fi |
---|
[222] | 1655 | |
---|
[544] | 1656 | IGCM_debug_PopStack "IGCM_sys_rebuild" |
---|
[222] | 1657 | } |
---|
| 1658 | |
---|
| 1659 | ############################################################ |
---|
| 1660 | # Activate Running Environnment Variables |
---|
| 1661 | |
---|
| 1662 | function IGCM_sys_activ_variables { |
---|
[544] | 1663 | IGCM_debug_PushStack "IGCM_sys_activ_variables" |
---|
| 1664 | if ( $DEBUG_sys ) ; then |
---|
| 1665 | echo "IGCM_sys_activ_variables" |
---|
| 1666 | fi |
---|
[621] | 1667 | |
---|
| 1668 | typeset max_omp |
---|
| 1669 | |
---|
| 1670 | ulimit -s unlimited |
---|
| 1671 | |
---|
| 1672 | (( max_omp = 0 )) |
---|
| 1673 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[623] | 1674 | |
---|
[621] | 1675 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1676 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[623] | 1677 | |
---|
[621] | 1678 | # Only if we really have an executable for the component : |
---|
| 1679 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 1680 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1681 | if [ ${comp_proc_omp_loc} -gt ${max_omp} ] ; then |
---|
| 1682 | (( max_omp = comp_proc_omp_loc )) |
---|
| 1683 | fi |
---|
| 1684 | fi |
---|
| 1685 | done |
---|
| 1686 | if [ ${max_omp} -gt 1 ] ; then |
---|
| 1687 | module load openmp/${max_omp}thds |
---|
| 1688 | fi |
---|
| 1689 | |
---|
[544] | 1690 | IGCM_debug_PopStack "IGCM_sys_activ_variables" |
---|
[222] | 1691 | } |
---|
| 1692 | |
---|
| 1693 | ############################################################ |
---|
| 1694 | # Desactivate Running Environnment Variables |
---|
| 1695 | |
---|
| 1696 | function IGCM_sys_desactiv_variables { |
---|
[544] | 1697 | IGCM_debug_PushStack "IGCM_sys_desactiv_variables" |
---|
| 1698 | if ( $DEBUG_sys ) ; then |
---|
| 1699 | echo "IGCM_sys_desactiv_variables" |
---|
| 1700 | fi |
---|
| 1701 | IGCM_debug_PopStack "IGCM_sys_desactiv_variables" |
---|
[222] | 1702 | } |
---|
| 1703 | |
---|
| 1704 | ############################################################ |
---|
[621] | 1705 | # Build MPI/OMP scripts run file (dummy function) |
---|
[222] | 1706 | |
---|
| 1707 | function IGCM_sys_build_run_file { |
---|
[621] | 1708 | |
---|
| 1709 | IGCM_debug_Print 3 " dummy function : IGCM_sys_build_run_file " |
---|
| 1710 | |
---|
| 1711 | } |
---|
| 1712 | |
---|
| 1713 | ############################################################ |
---|
| 1714 | # Build MPI/OMP scripts |
---|
[623] | 1715 | function IGCM_sys_build_execution_scripts |
---|
[621] | 1716 | { |
---|
| 1717 | IGCM_debug_PushStack "IGCM_sys_build_execution_scripts" $@ |
---|
[544] | 1718 | if ( $DEBUG_sys ) ; then |
---|
[621] | 1719 | echo "IGCM_sys_build_execution_scripts " $@ |
---|
[544] | 1720 | fi |
---|
[623] | 1721 | typeset nodes listnodes init_node start_num init_exec comp ExeNameIn ExeNameOut |
---|
| 1722 | typeset node_num_current node_current comp_proc_mpi_loc comp_proc_omp_loc |
---|
[621] | 1723 | typeset num_corempi nombre_restant_node nombre_restant_comp |
---|
[395] | 1724 | |
---|
[621] | 1725 | if [ ! -f ${SUBMIT_DIR}/Job_${config_UserChoices_JobName} ] ; then |
---|
| 1726 | IGCM_debug_Exit "IGCM_sys_titane build_execution_scripts : Job_${config_UserChoices_JobName} doesn't exist in SUBMIT_DIR : ${SUBMIT_DIR} " |
---|
| 1727 | fi |
---|
[395] | 1728 | |
---|
[621] | 1729 | if ( ${OK_PARA_MPMD} ) ; then |
---|
| 1730 | |
---|
| 1731 | if [ -f run_file ] ; then |
---|
| 1732 | IGCM_sys_Rm -f run_file |
---|
| 1733 | fi |
---|
| 1734 | touch run_file |
---|
| 1735 | |
---|
| 1736 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1737 | |
---|
| 1738 | # Hosts treatment |
---|
| 1739 | |
---|
| 1740 | ${HOST_MPIRUN_COMMAND} hostname | sort | uniq > hosts.tmp |
---|
[623] | 1741 | |
---|
[621] | 1742 | i=0 |
---|
| 1743 | rm -f hosts |
---|
| 1744 | IGCM_debug_Print 1 "sys Titane, Hosts avaible :" |
---|
| 1745 | for nodes in `cat hosts.tmp` ; do |
---|
| 1746 | host[$i]=$nodes |
---|
| 1747 | echo "${host[$i]} slots=8 max_slots=8" >> hosts |
---|
| 1748 | IGCM_debug_Print 1 ${host[$i]} |
---|
| 1749 | i=$((i+1)) |
---|
| 1750 | done |
---|
| 1751 | rm -f hosts.tmp |
---|
[623] | 1752 | |
---|
[621] | 1753 | listnodes=${host[*]} |
---|
[623] | 1754 | |
---|
| 1755 | EXECUTION="${HOST_MPIRUN_COMMAND} -hostfile hosts" |
---|
| 1756 | |
---|
[621] | 1757 | # Initialisation |
---|
| 1758 | |
---|
| 1759 | init_node=y |
---|
| 1760 | node_num_current=0 |
---|
| 1761 | start_num=0 |
---|
| 1762 | init_exec=n |
---|
| 1763 | |
---|
| 1764 | # Test : if oasis is there, we put it at the first position |
---|
[623] | 1765 | |
---|
[621] | 1766 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[623] | 1767 | |
---|
[621] | 1768 | if [ "X${comp}" = "XCPL" ] ; then |
---|
[623] | 1769 | |
---|
[621] | 1770 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1771 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[623] | 1772 | |
---|
[621] | 1773 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 1774 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 1775 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
| 1776 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
| 1777 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
| 1778 | echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
| 1779 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
[623] | 1780 | |
---|
[621] | 1781 | init_node=n |
---|
[623] | 1782 | |
---|
[621] | 1783 | (( nombre_restant_node = NUM_COREPERNODE - 1 )) |
---|
| 1784 | node_num_current=0 |
---|
| 1785 | node_current=${host[${node_num_current}]} |
---|
[623] | 1786 | |
---|
| 1787 | EXECUTION="${EXECUTION} -H ${node_current} -np 1 ./script_${ExeNameOut}.ksh" |
---|
| 1788 | |
---|
[621] | 1789 | init_exec=y |
---|
| 1790 | start_num=1 |
---|
[623] | 1791 | |
---|
[621] | 1792 | fi |
---|
[623] | 1793 | |
---|
[621] | 1794 | done |
---|
[623] | 1795 | |
---|
[621] | 1796 | # Then loop on the components (except for oasis) |
---|
| 1797 | |
---|
| 1798 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[623] | 1799 | |
---|
[621] | 1800 | eval ExeNameIn=\${config_Executable_${comp}[0]} |
---|
| 1801 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
[623] | 1802 | |
---|
[621] | 1803 | # Only if we really have an executable for the component : |
---|
| 1804 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 1805 | |
---|
| 1806 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 1807 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
[623] | 1808 | |
---|
[621] | 1809 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 1810 | # echo "set -vx" >> script_${ExeNameOut}.ksh |
---|
| 1811 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 1812 | echo "export KMP_STACKSIZE=3g" >> script_${ExeNameOut}.ksh |
---|
| 1813 | echo "export KMP_LIBRARY=turnaround" >> script_${ExeNameOut}.ksh |
---|
| 1814 | echo "export MKL_SERIAL=YES" >> script_${ExeNameOut}.ksh |
---|
| 1815 | echo "OMP_NUM_THREADS=${comp_proc_omp_loc}" >> script_${ExeNameOut}.ksh |
---|
| 1816 | echo "(( MYMPIRANK = OMPI_COMM_WORLD_RANK - ${start_num})) " >> script_${ExeNameOut}.ksh |
---|
| 1817 | echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${MYMPIRANK} 2>out_${ExeNameOut}.err.\${MYMPIRANK}" >> script_${ExeNameOut}.ksh |
---|
| 1818 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
[623] | 1819 | |
---|
[621] | 1820 | node_num=0 |
---|
| 1821 | |
---|
[623] | 1822 | # We define the number of MPI process to be assigned for the component |
---|
| 1823 | |
---|
[621] | 1824 | nombre_restant_comp=${comp_proc_mpi_loc} |
---|
[623] | 1825 | |
---|
[621] | 1826 | # Loop on the allocated nodes |
---|
| 1827 | |
---|
| 1828 | for node in ${listnodes} ; do |
---|
| 1829 | |
---|
| 1830 | # We go to the current node |
---|
| 1831 | if [ ${node_num} = ${node_num_current} ] ; then |
---|
| 1832 | |
---|
[623] | 1833 | node_current=${host[${node_num_current}]} |
---|
[621] | 1834 | |
---|
[623] | 1835 | # If first time on the node : initialisation |
---|
[621] | 1836 | |
---|
| 1837 | if [ ${init_node} = y ] ; then |
---|
| 1838 | nombre_restant_node=${NUM_COREPERNODE} |
---|
[623] | 1839 | fi |
---|
| 1840 | |
---|
[621] | 1841 | # Test on the number of OMP threads |
---|
| 1842 | |
---|
[623] | 1843 | if [ ${comp_proc_omp_loc} -gt ${nombre_restant_node} ] ; then |
---|
[621] | 1844 | (( node_num = node_num + 1 )) |
---|
| 1845 | node_num_current=${node_num} |
---|
| 1846 | init_node=y |
---|
| 1847 | continue |
---|
| 1848 | fi |
---|
| 1849 | |
---|
| 1850 | # Number of MPI process to assign |
---|
| 1851 | |
---|
| 1852 | (( num_corempi = nombre_restant_node / comp_proc_omp_loc )) |
---|
[623] | 1853 | |
---|
| 1854 | if [ ${num_corempi} -gt ${nombre_restant_comp} ] ; then |
---|
[621] | 1855 | num_corempi=${nombre_restant_comp} |
---|
| 1856 | fi |
---|
| 1857 | |
---|
| 1858 | (( nombre_restant_node = nombre_restant_node - num_corempi * comp_proc_omp_loc )) |
---|
[623] | 1859 | (( nombre_restant_comp = nombre_restant_comp - num_corempi )) |
---|
| 1860 | |
---|
| 1861 | if [ ${init_exec} = y ] ; then |
---|
[621] | 1862 | EXECUTION="${EXECUTION} : -H ${node_current} -np ${num_corempi} ./script_${ExeNameOut}.ksh" |
---|
[623] | 1863 | else |
---|
[621] | 1864 | EXECUTION="${EXECUTION} -H ${node_current} -np ${num_corempi} ./script_${ExeNameOut}.ksh" |
---|
| 1865 | init_exec=y |
---|
| 1866 | fi |
---|
| 1867 | |
---|
| 1868 | (( start_num = num_corempi + start_num )) |
---|
[623] | 1869 | |
---|
[621] | 1870 | else |
---|
[623] | 1871 | |
---|
| 1872 | (( node_num = node_num + 1 )) |
---|
| 1873 | continue |
---|
[621] | 1874 | fi |
---|
[623] | 1875 | |
---|
| 1876 | # Test on the number of core/process remaining on the node/component |
---|
| 1877 | |
---|
[621] | 1878 | if [ ${nombre_restant_node} = 0 ] ; then |
---|
| 1879 | (( node_num = node_num + 1 )) |
---|
[623] | 1880 | node_num_current=${node_num} |
---|
| 1881 | init_node=y |
---|
[621] | 1882 | |
---|
| 1883 | if [ ${nombre_restant_comp} = 0 ] ; then |
---|
| 1884 | break 1 |
---|
| 1885 | fi |
---|
| 1886 | else |
---|
| 1887 | |
---|
| 1888 | node_num_current=${node_num} |
---|
[623] | 1889 | init_node=n |
---|
| 1890 | |
---|
| 1891 | if [ ${nombre_restant_comp} = 0 ] ; then |
---|
| 1892 | break 1 |
---|
| 1893 | fi |
---|
[621] | 1894 | fi |
---|
| 1895 | done |
---|
| 1896 | fi |
---|
| 1897 | done |
---|
[623] | 1898 | |
---|
[621] | 1899 | else |
---|
| 1900 | |
---|
| 1901 | # Then first loop on the components for the coupler ie oasis |
---|
| 1902 | |
---|
| 1903 | ## the coupler ie oasis must be the first one |
---|
[623] | 1904 | for comp in ${config_ListOfComponents[*]} ; do |
---|
[621] | 1905 | |
---|
[623] | 1906 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1907 | |
---|
| 1908 | # for CPL component only |
---|
| 1909 | if [ "X${comp}" = "XCPL" ] ; then |
---|
| 1910 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
| 1911 | echo "-np ${comp_proc_mpi_loc} ./${ExeNameOut} " >> run_file |
---|
| 1912 | fi |
---|
| 1913 | done |
---|
| 1914 | |
---|
[621] | 1915 | # Then second loop on the components |
---|
| 1916 | |
---|
[623] | 1917 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1918 | |
---|
| 1919 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1920 | |
---|
[621] | 1921 | # Only if we really have an executable for the component and not the coupler ie oasis: |
---|
[623] | 1922 | if ( [ "X${ExeNameOut}" != X\"\" ] && [ "X${comp}" != "XCPL" ] ) ; then |
---|
| 1923 | eval comp_proc_mpi_loc=\${${comp}_PROC_MPI} |
---|
[629] | 1924 | echo "-np ${comp_proc_mpi_loc} ./${ExeNameOut}" >> run_file |
---|
[623] | 1925 | fi |
---|
| 1926 | done |
---|
| 1927 | IGCM_sys_Chmod u+x run_file |
---|
[621] | 1928 | |
---|
[623] | 1929 | EXECUTION="${HOST_MPIRUN_COMMAND} --app ./run_file" |
---|
| 1930 | |
---|
[621] | 1931 | fi |
---|
| 1932 | |
---|
| 1933 | else # Only one executable. launch it. |
---|
| 1934 | |
---|
| 1935 | for comp in ${config_ListOfComponents[*]} ; do |
---|
| 1936 | |
---|
| 1937 | # Only if we really have an executable for the component : |
---|
[623] | 1938 | eval ExeNameOut=\${config_Executable_${comp}[1]} |
---|
| 1939 | if ( [ "X${ExeNameOut}" != X\"\" ] ) ; then |
---|
| 1940 | |
---|
| 1941 | echo "#!/bin/ksh" > script_${ExeNameOut}.ksh |
---|
| 1942 | echo "" >> script_${ExeNameOut}.ksh |
---|
| 1943 | if ( ${OK_PARA_OMP} ) ; then |
---|
| 1944 | eval comp_proc_omp_loc=\${${comp}_PROC_OMP} |
---|
| 1945 | echo "OMP_NUM_THREADS=${comp_proc_omp_loc}" >> script_${ExeNameOut}.ksh |
---|
| 1946 | fi |
---|
| 1947 | if ( ${OK_PARA_MPI} ) ; then |
---|
[621] | 1948 | # Default : mpirun used if nb_proc gt 1 |
---|
[623] | 1949 | # pour sortie out/err par process |
---|
| 1950 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out.\${OMPI_COMM_WORLD_RANK} 2>out_${ExeNameOut}.err.\${OMPI_COMM_WORLD_RANK}" >> script_${ExeNameOut}.ksh |
---|
| 1951 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
| 1952 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
| 1953 | EXECUTION="${HOST_MPIRUN_COMMAND} ./script_${ExeNameOut}.ksh" |
---|
| 1954 | else |
---|
| 1955 | # Default : mpirun is NOT used if nb_proc eq 1 |
---|
| 1956 | # pour sortie out/err par process |
---|
| 1957 | # echo "./${ExeNameOut} > out_${ExeNameOut}.out 2>out_${ExeNameOut}.err" >> script_${ExeNameOut}.ksh |
---|
| 1958 | echo "./${ExeNameOut}" >> script_${ExeNameOut}.ksh |
---|
| 1959 | IGCM_sys_Chmod u+x script_${ExeNameOut}.ksh |
---|
| 1960 | EXECUTION="time ./script_${ExeNameOut}.ksh" |
---|
| 1961 | fi |
---|
| 1962 | fi |
---|
[621] | 1963 | done |
---|
[623] | 1964 | |
---|
[544] | 1965 | fi |
---|
[621] | 1966 | |
---|
| 1967 | IGCM_debug_Print 1 "sys Titane : La commande d execution est " |
---|
| 1968 | IGCM_debug_Print 1 $EXECUTION |
---|
| 1969 | |
---|
| 1970 | IGCM_debug_PopStack "IGCM_sys_build_execution_scripts" |
---|
[222] | 1971 | } |
---|
[451] | 1972 | |
---|
| 1973 | ############################################################## |
---|
| 1974 | # NCO OPERATOR |
---|
| 1975 | |
---|
[544] | 1976 | function IGCM_sys_ncap2 { |
---|
| 1977 | IGCM_debug_PushStack "IGCM_sys_ncap2" -- $@ |
---|
| 1978 | if ( $DEBUG_sys ) ; then |
---|
| 1979 | echo "IGCM_sys_ncap2 :" $@ |
---|
| 1980 | fi |
---|
| 1981 | ncap2 "$@" |
---|
| 1982 | if [ $? -gt 0 ] ; then |
---|
| 1983 | echo "IGCM_sys_ncap2 : erreur ${@}." |
---|
| 1984 | IGCM_debug_Exit "ncap2" |
---|
| 1985 | fi |
---|
| 1986 | |
---|
| 1987 | IGCM_debug_PopStack "IGCM_sys_ncap2" |
---|
| 1988 | } |
---|
| 1989 | |
---|
[451] | 1990 | function IGCM_sys_ncatted { |
---|
[544] | 1991 | IGCM_debug_PushStack "IGCM_sys_ncatted" -- $@ |
---|
| 1992 | if ( $DEBUG_sys ) ; then |
---|
| 1993 | echo "IGCM_sys_ncatted :" $@ |
---|
| 1994 | fi |
---|
| 1995 | ncatted "$@" |
---|
| 1996 | if [ $? -gt 0 ] ; then |
---|
| 1997 | echo "IGCM_sys_ncatted : erreur ${@}." |
---|
| 1998 | IGCM_debug_Exit "ncatted" |
---|
| 1999 | fi |
---|
[451] | 2000 | |
---|
[544] | 2001 | IGCM_debug_PopStack "IGCM_sys_ncatted" |
---|
[451] | 2002 | } |
---|
| 2003 | |
---|
| 2004 | function IGCM_sys_ncbo { |
---|
[544] | 2005 | IGCM_debug_PushStack "IGCM_sys_ncbo" -- $@ |
---|
| 2006 | if ( $DEBUG_sys ) ; then |
---|
| 2007 | echo "IGCM_sys_ncbo :" $@ |
---|
| 2008 | fi |
---|
| 2009 | ncbo $@ |
---|
| 2010 | if [ $? -gt 0 ] ; then |
---|
| 2011 | echo "IGCM_sys_ncbo : erreur ${@}." |
---|
| 2012 | IGCM_debug_Exit "ncbo" |
---|
| 2013 | fi |
---|
[451] | 2014 | |
---|
[544] | 2015 | IGCM_debug_PopStack "IGCM_sys_ncbo" |
---|
[451] | 2016 | } |
---|
| 2017 | |
---|
| 2018 | function IGCM_sys_ncdiff { |
---|
[544] | 2019 | IGCM_debug_PushStack "IGCM_sys_ncdiff" -- $@ |
---|
| 2020 | if ( $DEBUG_sys ) ; then |
---|
| 2021 | echo "IGCM_sys_ncdiff :" $@ |
---|
| 2022 | fi |
---|
| 2023 | ncdiff $@ |
---|
| 2024 | if [ $? -gt 0 ] ; then |
---|
| 2025 | echo "IGCM_sys_ncdiff : erreur ${@}." |
---|
| 2026 | IGCM_debug_Exit "ncdiff" |
---|
| 2027 | fi |
---|
[451] | 2028 | |
---|
[544] | 2029 | IGCM_debug_PopStack "IGCM_sys_ncdiff" |
---|
[451] | 2030 | } |
---|
| 2031 | |
---|
| 2032 | function IGCM_sys_ncea { |
---|
[544] | 2033 | IGCM_debug_PushStack "IGCM_sys_ncea" -- $@ |
---|
| 2034 | if ( $DEBUG_sys ) ; then |
---|
| 2035 | echo "IGCM_sys_ncea :" $@ |
---|
| 2036 | fi |
---|
| 2037 | ncea $@ |
---|
| 2038 | if [ $? -gt 0 ] ; then |
---|
| 2039 | echo "IGCM_sys_ncea : erreur ${@}." |
---|
| 2040 | IGCM_debug_Exit "ncea" |
---|
| 2041 | fi |
---|
[451] | 2042 | |
---|
[544] | 2043 | IGCM_debug_PopStack "IGCM_sys_ncea" |
---|
[451] | 2044 | } |
---|
| 2045 | |
---|
| 2046 | function IGCM_sys_ncecat { |
---|
[544] | 2047 | IGCM_debug_PushStack "IGCM_sys_ncecat" -- $@ |
---|
| 2048 | if ( $DEBUG_sys ) ; then |
---|
| 2049 | echo "IGCM_sys_ncecat :" $@ |
---|
| 2050 | fi |
---|
| 2051 | ncecat $@ |
---|
| 2052 | if [ $? -gt 0 ] ; then |
---|
| 2053 | echo "IGCM_sys_ncecat : erreur ${@}." |
---|
| 2054 | IGCM_debug_Exit "ncecat" |
---|
| 2055 | fi |
---|
[451] | 2056 | |
---|
[544] | 2057 | IGCM_debug_PopStack "IGCM_sys_ncecat" |
---|
[451] | 2058 | } |
---|
| 2059 | |
---|
| 2060 | function IGCM_sys_ncflint { |
---|
[544] | 2061 | IGCM_debug_PushStack "IGCM_sys_ncflint" -- $@ |
---|
| 2062 | if ( $DEBUG_sys ) ; then |
---|
| 2063 | echo "IGCM_sys_ncflint :" $@ |
---|
| 2064 | fi |
---|
| 2065 | ncflint $@ |
---|
| 2066 | if [ $? -gt 0 ] ; then |
---|
| 2067 | echo "IGCM_sys_ncflint : erreur ${@}." |
---|
| 2068 | IGCM_debug_Exit "ncflint" |
---|
| 2069 | fi |
---|
[451] | 2070 | |
---|
[544] | 2071 | IGCM_debug_PopStack "IGCM_sys_ncflint" |
---|
[451] | 2072 | } |
---|
| 2073 | |
---|
| 2074 | function IGCM_sys_ncks { |
---|
[544] | 2075 | IGCM_debug_PushStack "IGCM_sys_ncks" -- $@ |
---|
| 2076 | if ( $DEBUG_sys ) ; then |
---|
| 2077 | echo "IGCM_sys_ncks :" $@ |
---|
| 2078 | fi |
---|
| 2079 | ncks $@ |
---|
| 2080 | if [ $? -gt 0 ] ; then |
---|
| 2081 | echo "IGCM_sys_ncks : erreur ${@}." |
---|
| 2082 | IGCM_debug_Exit "ncks" |
---|
| 2083 | fi |
---|
[451] | 2084 | |
---|
[544] | 2085 | IGCM_debug_PopStack "IGCM_sys_ncks" |
---|
[451] | 2086 | } |
---|
| 2087 | |
---|
| 2088 | function IGCM_sys_ncpdq { |
---|
[544] | 2089 | IGCM_debug_PushStack "IGCM_sys_ncpdq" -- $@ |
---|
| 2090 | if ( $DEBUG_sys ) ; then |
---|
| 2091 | echo "IGCM_sys_ncpdq :" $@ |
---|
| 2092 | fi |
---|
| 2093 | ncpdq $@ |
---|
| 2094 | if [ $? -gt 0 ] ; then |
---|
| 2095 | echo "IGCM_sys_ncpdq : erreur ${@}." |
---|
| 2096 | IGCM_debug_Exit "ncpdq" |
---|
| 2097 | fi |
---|
[451] | 2098 | |
---|
[544] | 2099 | IGCM_debug_PopStack "IGCM_sys_ncpdq" |
---|
[451] | 2100 | } |
---|
| 2101 | |
---|
| 2102 | function IGCM_sys_ncra { |
---|
[544] | 2103 | IGCM_debug_PushStack "IGCM_sys_ncra" -- $@ |
---|
| 2104 | if ( $DEBUG_sys ) ; then |
---|
| 2105 | echo "IGCM_sys_ncra :" $@ |
---|
| 2106 | fi |
---|
| 2107 | ncra $@ |
---|
| 2108 | if [ $? -gt 0 ] ; then |
---|
| 2109 | echo "IGCM_sys_ncra : erreur ${@}." |
---|
| 2110 | IGCM_debug_Exit "ncra" |
---|
| 2111 | fi |
---|
[451] | 2112 | |
---|
[544] | 2113 | IGCM_debug_PopStack "IGCM_sys_ncra" |
---|
[451] | 2114 | } |
---|
| 2115 | |
---|
| 2116 | function IGCM_sys_ncrcat { |
---|
[544] | 2117 | IGCM_debug_PushStack "IGCM_sys_ncrcat" -- $@ |
---|
| 2118 | if ( $DEBUG_sys ) ; then |
---|
| 2119 | echo "IGCM_sys_ncrcat :" $@ |
---|
| 2120 | fi |
---|
[590] | 2121 | ncrcat --omp_num_threads 2 $@ |
---|
[544] | 2122 | if [ $? -gt 0 ] ; then |
---|
| 2123 | echo "IGCM_sys_ncrcat : erreur ${@}." |
---|
[451] | 2124 | # IGCM_debug_Exit "ncrcat" |
---|
[544] | 2125 | fi |
---|
[451] | 2126 | |
---|
[544] | 2127 | IGCM_debug_PopStack "IGCM_sys_ncrcat" |
---|
[451] | 2128 | } |
---|
| 2129 | |
---|
| 2130 | function IGCM_sys_ncrename { |
---|
[544] | 2131 | IGCM_debug_PushStack "IGCM_sys_ncrename" -- $@ |
---|
| 2132 | if ( $DEBUG_sys ) ; then |
---|
| 2133 | echo "IGCM_sys_ncrename :" $@ |
---|
| 2134 | fi |
---|
| 2135 | ncrename $@ |
---|
| 2136 | if [ $? -gt 0 ] ; then |
---|
| 2137 | echo "IGCM_sys_ncrename : erreur ${@}." |
---|
| 2138 | IGCM_debug_Exit "ncrename" |
---|
| 2139 | fi |
---|
[451] | 2140 | |
---|
[544] | 2141 | IGCM_debug_PopStack "IGCM_sys_ncrename" |
---|
[451] | 2142 | } |
---|
| 2143 | |
---|
| 2144 | function IGCM_sys_ncwa { |
---|
[544] | 2145 | IGCM_debug_PushStack "IGCM_sys_ncwa" -- $@ |
---|
| 2146 | if ( $DEBUG_sys ) ; then |
---|
| 2147 | echo "IGCM_sys_ncwa :" $@ |
---|
| 2148 | fi |
---|
| 2149 | ncwa $@ |
---|
| 2150 | if [ $? -gt 0 ] ; then |
---|
| 2151 | echo "IGCM_sys_ncwa : erreur ${@}." |
---|
| 2152 | IGCM_debug_Exit "ncwa" |
---|
| 2153 | fi |
---|
[451] | 2154 | |
---|
[544] | 2155 | IGCM_debug_PopStack "IGCM_sys_ncwa" |
---|
[451] | 2156 | } |
---|
[544] | 2157 | |
---|
| 2158 | ############################################################## |
---|
| 2159 | # CDO OPERATOR |
---|
| 2160 | |
---|
| 2161 | function IGCM_sys_cdo { |
---|
| 2162 | IGCM_debug_PushStack "IGCM_sys_cdo" -- $@ |
---|
| 2163 | if ( $DEBUG_sys ) ; then |
---|
| 2164 | echo "IGCM_sys_cdo :" $@ |
---|
| 2165 | fi |
---|
| 2166 | \cdo $@ |
---|
| 2167 | if [ $? -gt 0 ] ; then |
---|
| 2168 | echo "IGCM_sys_cdo : erreur ${@}." |
---|
| 2169 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2170 | return 1 |
---|
| 2171 | else |
---|
| 2172 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2173 | return 0 |
---|
| 2174 | fi |
---|
| 2175 | |
---|
| 2176 | IGCM_debug_PopStack "IGCM_sys_cdo" |
---|
| 2177 | } |
---|